View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12378_low_6 (Length: 386)
Name: NF12378_low_6
Description: NF12378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12378_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 14 - 380
Target Start/End: Original strand, 32021610 - 32021976
Alignment:
| Q |
14 |
ctaataccagtgagctgaacataataaaacgtattaactctttgattctttaacatcggagcaagtactgaatcactgggttgaaccgagttaaactcaa |
113 |
Q |
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| T |
32021610 |
ctaataccagtgagctgaacataataaaacgtattaactctttgattctttaacatcggagcaagtactgaatcagcgggttgaaccgagttaaactcaa |
32021709 |
T |
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| Q |
114 |
gagttgacgattttcccgagtcacggtcaactaaacagtaagaaaacgatgaagctttgatctgtgaaattaaagattgcgacccaccaccaagtccgag |
213 |
Q |
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| T |
32021710 |
gagttgacgattttcccgagtcacggtcaactaaacagtaagaaaacgatgaagctttgatctgcgaaattaaagattgcgacccaccaccaagtccgag |
32021809 |
T |
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| Q |
214 |
taaaccagctgcaccgacgaataaaccttcgttatcatggccacaaccgatagcaacacggttgactgacccggagtttccaaaagagactgtttcagtg |
313 |
Q |
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||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32021810 |
taaaccagctgcaccaacgaataaaccttcgttatcgtggccacaaccgatagcaacacggttcactgacccggagtttccaaaagagactgtttcagtg |
32021909 |
T |
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| Q |
314 |
ctatattctccaacagtgaatgagccatcaccgtaagaaacttggtattgacatttaccatcacgac |
380 |
Q |
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| T |
32021910 |
ctatattctccaacagtgaatgagccatcaccgtaagaaacttggtattgacatttaccatcacgac |
32021976 |
T |
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