View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12382_high_2 (Length: 612)

Name: NF12382_high_2
Description: NF12382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12382_high_2
NF12382_high_2
[»] chr3 (17 HSPs)
chr3 (165-444)||(8431406-8431686)
chr3 (486-591)||(48531600-48531706)
chr3 (301-444)||(43073034-43073178)
chr3 (298-444)||(31525360-31525507)
chr3 (307-444)||(28934724-28934861)
chr3 (301-438)||(10454279-10454422)
chr3 (292-428)||(44656229-44656369)
chr3 (301-420)||(47820897-47821022)
chr3 (301-438)||(9358743-9358883)
chr3 (307-444)||(52076066-52076209)
chr3 (529-588)||(48528882-48528941)
chr3 (301-424)||(53349401-53349527)
chr3 (307-444)||(20701152-20701292)
chr3 (307-431)||(28956952-28957079)
chr3 (307-438)||(42881885-42882019)
chr3 (301-420)||(46750212-46750333)
chr3 (301-360)||(55166895-55166955)
[»] chr1 (14 HSPs)
chr1 (223-428)||(31833817-31834019)
chr1 (298-443)||(12172951-12173097)
chr1 (213-444)||(19472716-19472944)
chr1 (301-419)||(46757306-46757425)
chr1 (301-438)||(26990601-26990739)
chr1 (307-444)||(8462958-8463097)
chr1 (301-420)||(42442019-42442142)
chr1 (301-438)||(47028931-47029072)
chr1 (301-444)||(38548673-38548821)
chr1 (307-426)||(41955891-41956016)
chr1 (301-391)||(43268645-43268739)
chr1 (301-438)||(26384960-26385100)
chr1 (307-444)||(28447722-28447863)
chr1 (302-443)||(43460698-43460848)
[»] chr7 (14 HSPs)
chr7 (301-438)||(46691839-46691981)
chr7 (307-444)||(30655586-30655727)
chr7 (307-444)||(22197675-22197816)
chr7 (307-444)||(22240005-22240146)
chr7 (307-427)||(36615808-36615927)
chr7 (298-443)||(31424761-31424912)
chr7 (307-444)||(1039051-1039191)
chr7 (307-420)||(49035865-49035983)
chr7 (304-426)||(41702867-41702992)
chr7 (307-416)||(33320710-33320817)
chr7 (213-267)||(30655761-30655815)
chr7 (298-438)||(32678937-32679083)
chr7 (367-444)||(42598053-42598130)
chr7 (301-438)||(43397640-43397781)
[»] chr2 (6 HSPs)
chr2 (295-431)||(38908663-38908800)
chr2 (301-428)||(41419617-41419748)
chr2 (301-438)||(14732334-14732473)
chr2 (301-419)||(41378216-41378332)
chr2 (307-444)||(22649053-22649193)
chr2 (367-420)||(43356750-43356803)
[»] chr8 (14 HSPs)
chr8 (301-444)||(40930818-40930961)
chr8 (308-444)||(13959207-13959347)
chr8 (301-440)||(24200614-24200753)
chr8 (301-438)||(25829259-25829399)
chr8 (301-445)||(5200469-5200615)
chr8 (301-437)||(22839250-22839391)
chr8 (301-444)||(38086402-38086551)
chr8 (307-374)||(10124866-10124935)
chr8 (301-444)||(30836116-30836272)
chr8 (395-444)||(7845135-7845184)
chr8 (367-443)||(44362918-44362994)
chr8 (470-531)||(38542725-38542786)
chr8 (380-444)||(584123-584187)
chr8 (301-360)||(7845080-7845138)
[»] chr4 (11 HSPs)
chr4 (307-428)||(16572074-16572198)
chr4 (309-443)||(47571560-47571694)
chr4 (301-444)||(32183275-32183425)
chr4 (342-438)||(15186975-15187072)
chr4 (444-531)||(5341706-5341793)
chr4 (304-438)||(55133102-55133233)
chr4 (301-438)||(25641263-25641407)
chr4 (300-438)||(16662301-16662441)
chr4 (302-438)||(42390766-42390906)
chr4 (444-504)||(25222218-25222278)
chr4 (394-444)||(45511390-45511440)
[»] chr5 (10 HSPs)
chr5 (301-420)||(23172985-23173107)
chr5 (301-426)||(22887211-22887337)
chr5 (301-444)||(9931785-9931935)
chr5 (292-426)||(25539810-25539947)
chr5 (307-444)||(10431063-10431204)
chr5 (307-427)||(819134-819254)
chr5 (301-443)||(3677779-3677924)
chr5 (316-444)||(42241577-42241708)
chr5 (307-359)||(2292168-2292222)
chr5 (386-444)||(9597742-9597800)
[»] chr6 (8 HSPs)
chr6 (307-444)||(33112703-33112844)
chr6 (301-438)||(10246910-10247049)
chr6 (213-445)||(11546685-11546912)
chr6 (300-435)||(6575720-6575860)
chr6 (301-443)||(15859093-15859244)
chr6 (213-444)||(34761080-34761306)
chr6 (301-360)||(33984753-33984814)
chr6 (386-429)||(12754422-12754465)
[»] scaffold0209 (1 HSPs)
scaffold0209 (380-444)||(12883-12947)
[»] scaffold0343 (1 HSPs)
scaffold0343 (386-442)||(7956-8012)


Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-128; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 165 - 444
Target Start/End: Complemental strand, 8431686 - 8431406
Alignment:
Q  165 ggttgctgctgtctttttggtgtggtgctgcagttttggctgttatgagtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtca 264  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8431686 ggttgctgctgtctttttggtgtggtgctgtagttttggctgttatgagtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtca 8431587  T
Q  265 ttatttttgt-gtccggtagttagtgccttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgt 363  Q
    || ||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8431586 tttttttttttgaccggtagttagtgccttagtgttggggtggtttttaaggggtttttgttcgagccggtgttttgttgcaaccgatttccccttgtgt 8431487  T
Q  364 ttattttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  8431486 ttattttttccatccgagcttgttagtgcatcttgcacgggcttcttgatcaataatattttgccgtttcaaaaaaaaaaa 8431406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 486 - 591
Target Start/End: Original strand, 48531600 - 48531706
Alignment:
Q  486 accaacaccacttcctctcaatctcattcaaggttgttttctcttagcttctcatatctcataaatac-aacgctcttgcaaacaagacgtgataggtga 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  48531600 accaacaccacttcctctcaatctcattcaaggttgttttctcttagcttctcatatctcataaatacaaatgctcttgcaaacaagacgtgataggtga 48531699  T
Q  585 acaggtt 591  Q
    |||||||    
T  48531700 acaggtt 48531706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 43073178 - 43073034
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt-tattttttccatccgagcttgttagtgcatcttgc 399  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || | ||||||||| || ||||| ||||||||||||||    
T  43073178 gggtggtttttaaggggtttttgttcgagccggtgttttaaggcaaccgatttccccttgtattcttttttttccacccaagcttattagtgcatcttgc 43073079  T
Q  400 acgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||    
T  43073078 acgggcttgttggttaataatattttgccgattcaaaaaaaaaaa 43073034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 298 - 444
Target Start/End: Original strand, 31525360 - 31525507
Alignment:
Q  298 ttagggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatct 396  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | | ||||||||| || ||||| ||||||| |||    
T  31525360 ttagggtggtttttaaggggtttttgttcgagccgttgtttgtgtggcaaccgatttccccttgtttgttttttttccacccaagcttattagtgcttct 31525459  T
Q  397 tgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  31525460 tgcacaggcttgttggttaataatattttgccgattcaaaaaaaaaaa 31525507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 28934861 - 28934724
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttt-tccatccgagcttgttagtgcatcttgcacgggc 405  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||| |||| |||||||| ||||||| ||||||||||||    
T  28934861 tttttaaggggtttttgttcgagccggtgttt-gtggcaaccgatttccccttgttttgttttttctccacccgagcttattagtgcttcttgcacgggc 28934763  T
Q  406 ttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    || |||||||||||| ||||||   |||||||| |||||    
T  28934762 ttgttggttaataatattttgctaattcaaaaaaaaaaa 28934724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 10454279 - 10454422
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttatttttt-----ccatccgagcttgttagtgcat 394  Q
    ||||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||| | ||||||||     ||| |||||||| |||||||      
T  10454279 gggtggtttttaaggggtttttgtttgagccggctttcttgtggcaaccgatttccccttgtatgtattttttttttcccacccgagcttattagtgctc 10454378  T
Q  395 cttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||    
T  10454379 cttgcacgggcttgttggttaataatattttgccatttcaaaaa 10454422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 292 - 428
Target Start/End: Complemental strand, 44656369 - 44656229
Alignment:
Q  292 ttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt---gtttattttt-tccatccgagcttgtt 387  Q
    ||||| ||||||||||||||||||| |||||||||||| | ||||| | ||||||||||||| |||||||   |||| ||||| |||| |||||||| ||    
T  44656369 ttagttttagggtggtttttaagggatttttgttcgagtctgtgttatatggcaaccgattttcccttgtatggtttttttttctccacccgagcttatt 44656270  T
Q  388 agtgcatcttgcacgggcttcttggttaataattttttgcc 428  Q
     ||||||||||||||||||| |||||||||||| |||||||    
T  44656269 tgtgcatcttgcacgggcttgttggttaataatattttgcc 44656229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 47820897 - 47821022
Alignment:
Q  301 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgcat 394  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| | | ||||||||    ||| |||||||| ||||||| |    
T  47820897 gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctttgtatttttttcctccacccgagcttattagtgcgt 47820996  T
Q  395 cttgcacgggcttcttggttaataat 420  Q
    ||||||||||||| ||||||||||||    
T  47820997 cttgcacgggcttgttggttaataat 47821022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 438
Target Start/End: Complemental strand, 9358883 - 9358743
Alignment:
Q  301 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt-ttattttttccatccgagcttgttagtgcatctt 397  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| | | || |||| |||| || ||||| ||||| | |||     
T  9358883 gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctatgtttttttctccacccaagcttattagtacttctc 9358784  T
Q  398 gcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||||| |||| ||||||| |||||||| ||||||||    
T  9358783 gcacgggcttgttgggtaataatattttgccgattcaaaaa 9358743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 444
Target Start/End: Original strand, 52076066 - 52076209
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttt------tccatccgagcttgttagtgcatcttgca 400  Q
    ||||||||||||||||||||||||   |||||| |||||||||||| |||||||| | |||||||      |||| |||||||| ||||||| ||| |||    
T  52076066 tttttaaggggtttttgttcgagcgtttgttttatggcaaccgattaccccttgtttgtattttttttttctccacccgagcttattagtgcttctcgca 52076165  T
Q  401 cgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||||| ||||||| |||| |||||||| |||||||| |||||    
T  52076166 cgggcttgttggttagtaatattttgccgattcaaaaaaaaaaa 52076209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 529 - 588
Target Start/End: Original strand, 48528882 - 48528941
Alignment:
Q  529 ttagcttctcatatctcataaatacaacgctcttgcaaacaagacgtgataggtgaacag 588  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48528882 ttagcttctcatatctcataaatacaatgctcttgcaaacaagacgtgataggtgaacag 48528941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 53349401 - 53349527
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttattttttccatccgagcttgttagtgcatctt 397  Q
    ||||||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||  |||||| |||| ||| || || || ||||||| ||||    
T  53349401 gggtggtttttaaggggtttttgtttgagccggtgtttgtgcggcaaccgattttcccttgtatgtttaattttcccacccaagtttattagtgcttctt 53349500  T
Q  398 gcacgggcttcttggttaataattttt 424  Q
    ||| | |||| ||||||||||||||||    
T  53349501 gcatgagcttgttggttaataattttt 53349527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 307 - 444
Target Start/End: Original strand, 20701152 - 20701292
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttt---tccatccgagcttgttagtgcatcttgcacgg 403  Q
    ||||||||||||||||||||||||||  ||| |||||||| |||||||||||||| | |||||||   | || |||||||| ||||||| ||||| ||||    
T  20701152 tttttaaggggtttttgttcgagccgtagttgtgtggcaatcgatttccccttgtttgtatttttttcttcacccgagcttattagtgcttcttgtacgg 20701251  T
Q  404 gcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||  |||||||||||| |||||| | || ||||| |||||    
T  20701252 gctcgttggttaataatattttgctgatttaaaaaaaaaaa 20701292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 307 - 431
Target Start/End: Original strand, 28956952 - 28957079
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct--tgtgtttattttttccatccgagcttgttagtgcatcttgcacgg 403  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||  | ||||| |||||  || |||||||| | ||||  ||||||||||    
T  28956952 ttttaaaggggtttttgttcgagccggtgtttgtgtggcaaccgatttccccttctttgtttttttttctcacccgagcttatcagtgtttcttgcacgg 28957051  T
Q  404 gcttcttggttaataattttttgccgtt 431  Q
     ||| |||||||||||| ||||| ||||    
T  28957052 acttgttggttaataatattttgtcgtt 28957079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 307 - 438
Target Start/End: Original strand, 42881885 - 42882019
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg----tgtttattttttccatccgagcttgttagtgcatcttgcacg 402  Q
    ||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||    ||| | ||||||||  |||||||| ||||||||||||| |||    
T  42881885 tttttaaggcgtttttgtttgagccggtgtattgtggcaatcgatttccccttgtatttgtgttttttttcctcccgagctttttagtgcatcttgtacg 42881984  T
Q  403 ggcttcttggttaataattttttgccgtttcaaaaa 438  Q
     |||| |||| ||||||| |||||||| || |||||    
T  42881985 agcttgttgg-taataatattttgccgatttaaaaa 42882019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 46750212 - 46750333
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttc---catccgagcttgttagtgcatctt 397  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||||||| || |||| |||  ||||||   || |||||||| ||||||||||||    
T  46750212 gggtggtttttaaggg-tttttgttcgaaccggtgttttgcggcaaccgattttcctttgtattttctttttctttcacccgagcttattagtgcatctt 46750310  T
Q  398 gcacgggcttcttggttaataat 420  Q
    | || |  || ||||||||||||    
T  46750311 gtacagatttgttggttaataat 46750333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 55166955 - 55166895
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 360  Q
    |||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||    
T  55166955 gggtggtttttaaggggtttttgttcgagccaaagtttgtgcggcaaccgatttccccttg 55166895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 223 - 428
Target Start/End: Original strand, 31833817 - 31834019
Alignment:
Q  223 aggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggtttttaaggggttttt 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  31833817 aggggtatgcttgcggattgccatttgtatatgtctgcgtcattacttttgtgactggtagtttgtgccttagtgttggggtggtttttaaggggttttt 31833916  T
Q  323 gttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattt 422  Q
    ||||||||||||||| ||||||||||||||| ||||||| |   |||||| || |||||||||||||||||||||||||||  || |||||||||||| |    
T  31833917 gttcgagccggtgttatgtggcaaccgattttcccttgtat---tttttttcacccgagcttgttagtgcatcttgcacggatttgttggttaataatat 31834013  T
Q  423 tttgcc 428  Q
    ||||||    
T  31834014 tttgcc 31834019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 12172951 - 12173097
Alignment:
Q  298 ttagggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatct 396  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| | | ||||||||| || ||||| ||||||| |||    
T  12172951 ttagggtggtttttaaggggtttttgttcgagctgatgtttgtgtggcaaccgatttccccttgtttgttttttttccacccaagcttattagtgcttct 12173050  T
Q  397 tgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa 443  Q
    ||||||||||| |||||||||||| |||||||| |||||||| ||||    
T  12173051 tgcacgggcttgttggttaataatattttgccgattcaaaaaaaaaa 12173097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 213 - 444
Target Start/End: Original strand, 19472716 - 19472944
Alignment:
Q  213 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggttttta 312  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||| ||||||||||| | |||||       ||  || ||||||| |  ||||||||||||    
T  19472716 gtgttgatgcaggggtatgcttgtggtctgtcacttgtatatgcctgcgtcattactcttgtg-------gtgtgttccttagtttatgggtggttttta 19472808  T
Q  313 agggg-tttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttc--catccgagcttgttagtgcatcttgcacgggcttc 408  Q
    | ||| |||||||||||||||| |||| | ||||||| ||||||||||| | | |||||||||  || |||||||| ||||||| ||||||||||||||     
T  19472809 aagggatttttgttcgagccggagtttgtatggcaactgatttccccttctttgtattttttctccacccgagcttattagtgcgtcttgcacgggcttg 19472908  T
Q  409 ttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||||||| |||||||| |||||||| |||||    
T  19472909 ttggttaataatattttgccgattcaaaaaaaaaaa 19472944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 301 - 419
Target Start/End: Original strand, 46757306 - 46757425
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc 399  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||| | ||  ||||||||| | |||||| ||||||||||||||    
T  46757306 gggtggtttttaaagggtttttgttcgagctggtgttattgtggcaatcgatttccccttatattgtttttttccacctgagcttattagtgcatcttgc 46757405  T
Q  400 acgggcttcttggttaataa 419  Q
    |||||||| |||||||||||    
T  46757406 acgggcttgttggttaataa 46757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 26990601 - 26990739
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc 399  Q
    |||||||||||||||| |||||||| ||||||||| || || ||||| |||||| ||||||| | | ||||||||| || ||||| ||||||| ||||||    
T  26990601 gggtggtttttaagggatttttgtttgagccggtgcttgtgcggcaatcgattttcccttgtatgttttttttccacccaagcttattagtgcttcttgc 26990700  T
Q  400 acgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||| |||||||||||| |||||||| ||||||||    
T  26990701 acgggcttattggttaataatattttgccgattcaaaaa 26990739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 8463097 - 8462958
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttc--catccgagcttgttagtgcatcttgcacgg 403  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||| | |||||||||  || |||||||  ||||||| |||||||||     
T  8463097 tttttaaggggtttttgttcgagccgacgtttttgtggcaaccgattttcccttgtatgtattttttctccacccgagctaattagtgcttcttgcacga 8462998  T
Q  404 gcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||| |||||||||||| |||| || ||||||||| |||||    
T  8462997 gcttgttggttaataatatttt-ccatttcaaaaaaaaaaa 8462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 301 - 420
Target Start/End: Complemental strand, 42442142 - 42442019
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgt---ttattttttccatccgagcttgttagtgcatct 396  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||| |   || |||||| || |||||||| ||||||| |||    
T  42442142 gggtggtttttaaggggtttttgttcgagtcggtgttttaatggcaaccgatttcccgttgtttgtattttttttttcacccgagcttattagtgcttct 42442043  T
Q  397 tgcacgggcttcttggttaataat 420  Q
    ||||||| ||| ||||||||||||    
T  42442042 tgcacggacttgttggttaataat 42442019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 47028931 - 47029072
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtg-ttttgtggcaaccgatttccccttgtgttta-----ttttttccatccgagcttgttagtgcat 394  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||     ||||||||| |||||||| ||| ||| |    
T  47028931 gggtagtttttaaggggtttttgttcgagccggtgtttttgcggcaaccgatttccccttgtatttatgtttttttttccacccgagcttattaatgcgt 47029030  T
Q  395 cttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    ||||||||  ||| ||||||  |||| ||| |||||||||||||    
T  47029031 cttgcacgaacttgttggtt--taatatttggccgtttcaaaaa 47029072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 38548673 - 38548821
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttatttttt--ccatccgagcttgttagtgcatc 395  Q
    |||||||||||||||||  ||||||||||||    ||| | ||||||||||||||||||||  ||||| ||||||  ||| |||||||| ||||||| ||    
T  38548673 gggtggtttttaaggggggtttgttcgagccaaattttgtatggcaaccgatttccccttgcttgtttttttttttcccacccgagcttattagtgcgtc 38548772  T
Q  396 ttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||||||| || |||||||||||| |||||||| |||||||| |||||    
T  38548773 ttgcacgggtttgttggttaataatattttgccgattcaaaaaaaaaaa 38548821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 307 - 426
Target Start/End: Complemental strand, 41956016 - 41955891
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgt-----ttattttttccatccgagcttgttagtgcatcttgca 400  Q
    |||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |     || |||| ||||||| ||||| |||||| ||||||||    
T  41956016 tttttaagggatttttgttcgagccggtgttattatggcaaccgatttccccttgtattttagtttttttctccatccaagcttattagtgtatcttgca 41955917  T
Q  401 cgggcttcttggttaataattttttg 426  Q
    ||   || |||||||||||| |||||    
T  41955916 cgaatttgttggttaataatattttg 41955891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 391
Target Start/End: Complemental strand, 43268739 - 43268645
Alignment:
Q  301 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct--tgtgtttattttttccatccgagcttgttagtg 391  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||  | ||||| |||| |||| |||||||| ||||||    
T  43268739 gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctttgttttttttctccacccgagcttattagtg 43268645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 26384960 - 26385100
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt---ttattttttccatccgagcttgttagtgcatct 396  Q
    ||||||||||||||||| ||||||| |||| ||||||| | || ||||||||||||| |||| |   || ||||||||| || ||||| |||| || |||    
T  26384960 gggtggtttttaagggggttttgtttgagctggtgtttgtatgacaaccgatttccctttgtttgtatttttttttccacccaagcttattagcgcttct 26385059  T
Q  397 tgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    || |||||||| | |||||||||| |||| | ||||||||||    
T  26385060 tg-acgggcttgtcggttaataatattttactgtttcaaaaa 26385100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 444
Target Start/End: Original strand, 28447722 - 28447863
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt---ttattttttccatccgagcttgttagtgcatcttgcacg 402  Q
    |||||||| |||||||||||| || | ||||| | | ||||||||||| ||||||| |   || |||||| ||  |||  || ||||||| |||||||||    
T  28447722 tttttaagaggtttttgttcgtgctgatgtttatattgcaaccgattttcccttgtttgtcttttttttttcactcgaatttattagtgcttcttgcacg 28447821  T
Q  403 ggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| |||||||||||| |||||||| |||||||| |||||    
T  28447822 ggcttgttggttaataatattttgccgattcaaaaaaaaaaa 28447863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 443
Target Start/End: Original strand, 43460698 - 43460848
Alignment:
Q  302 ggtggttttt-aaggggtttttgttcgagccggtgttttg--tggcaaccgatttccccttgt--gtttattttttc----catccgagcttgttagtgc 392  Q
    |||||||||| |||||||||||||||||| | ||||||||  | ||||||||||||||||| |  |||| |||||||    || |  ||||| |||||||    
T  43460698 ggtggtttttgaaggggtttttgttcgagtcagtgttttgtatcgcaaccgatttccccttcttagttttttttttcttttcaccttagcttattagtgc 43460797  T
Q  393 atcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa 443  Q
     ||| |||| | ||| |||||||||||| ||||| || |||||||| ||||    
T  43460798 ttctcgcacagacttgttggttaataatattttgtcgattcaaaaaaaaaa 43460848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 301 - 438
Target Start/End: Complemental strand, 46691981 - 46691839
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgcatc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    ||| |||||||||||||||| ||    
T  46691981 gggtggtttttaaggggtttttgttcgagccggtgtttatgtggcaaccgatttccccttgtatgtattttttttctccacccgagcttgttagtgcttc 46691882  T
Q  396 ttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||||||| |||||||||||| |||||||| ||||||||    
T  46691881 ttgcacgggcttgttggttaataatattttgccgattcaaaaa 46691839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 30655727 - 30655586
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtg--gcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatcttgcacg 402  Q
    |||||||| |||||||||||||| || | |||||||  ||||||||||||||||||| | ||||||||  ||| |||||||| ||||||| |||||||||    
T  30655727 tttttaagaggtttttgttcgagtcgatattttgtgtggcaaccgatttccccttgtttgtattttttttccacccgagcttattagtgcgtcttgcacg 30655628  T
Q  403 ggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| |||||||||||| ||||||||||||||||| |||||    
T  30655627 ggcttgttggttaataatattttgccgtttcaaaaaaaaaaa 30655586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 307 - 444
Target Start/End: Original strand, 22197675 - 22197816
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg-----tgtttattttttccatccgagcttgttagtgcatcttgcac 401  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||||||     ||||| ||||||||| |||||||| |||||||| |||||||    
T  22197675 tttttaaggggtttttgttcgagacggtgttttgtggtaatcgatttccccttgtaatttgttt-ttttttccacccgagctttttagtgcaccttgcac 22197773  T
Q  402 gggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    || ||| |||||||||||| |||| | |||||||||| |||||    
T  22197774 ggacttgttggttaataatattttacagtttcaaaaaaaaaaa 22197816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 22240146 - 22240005
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg-----tgtttattttttccatccgagcttgttagtgcatcttgcac 401  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||||||     ||||| ||||||||| |||||||| |||||||| |||||||    
T  22240146 tttttaaggggtttttgttcgagacggtgttttgtggtaatcgatttccccttgtaatttgttt-ttttttccacccgagctttttagtgcaccttgcac 22240048  T
Q  402 gggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    || ||| |||||||||||| |||| | |||||||||| |||||    
T  22240047 ggacttgttggttaataatattttacagtttcaaaaaaaaaaa 22240005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 307 - 427
Target Start/End: Complemental strand, 36615927 - 36615808
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggct 406  Q
    ||||||| |||||||||||||||| || |||| |||||||||||||||||||||| ||  ||||||||| |||||||| ||||||| |||||||||||||    
T  36615927 tttttaaagggtttttgttcgagctggagttt-gtggcaaccgatttccccttgttttgtttttttccacccgagcttattagtgcttcttgcacgggct 36615829  T
Q  407 tcttggttaataattttttgc 427  Q
    | |||| ||||||| ||||||    
T  36615828 tgttgggtaataatattttgc 36615808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 298 - 443
Target Start/End: Complemental strand, 31424912 - 31424761
Alignment:
Q  298 ttagggtggttttt--aaggggtttttgttcgagccggtgttttg--tggcaaccgatttccccttgt--gtttattttttccatccgagcttgttagtg 391  Q
    ||||||||||||||  |||||||||||| |||||||||||||| |  ||||||||||||||||||| |  |||| |||| |||| || ||||| ||||||    
T  31424912 ttagggtggttttttaaaggggtttttgatcgagccggtgtttcgaatggcaaccgatttccccttctttgttttttttctccacccaagcttattagtg 31424813  T
Q  392 catcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa 443  Q
      ||||||||||| || |||||||||||| |||||||| |||||||| ||||    
T  31424812 tttcttgcacgggtttgttggttaataatattttgccgcttcaaaaaaaaaa 31424761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 1039191 - 1039051
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt--gtttattttttccatccgagcttgttagtgcatcttgcacgg 403  Q
    |||||||||||||||||||||||||   |||| | | ||||||||||| |||||||  |||| |||| |||| |||||||| ||||||| ||||||||||    
T  1039191 tttttaaggggtttttgttcgagccaaagtttgtattgcaaccgattttcccttgtttgttttttttatccacccgagcttattagtgcttcttgcacgg 1039092  T
Q  404 gcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||| | |||||||||| ||||||||||| ||||| |||||    
T  1039091 gcttgtcggttaataatattttgccgtttgaaaaaaaaaaa 1039051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 420
Target Start/End: Complemental strand, 49035983 - 49035865
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt----ttattttttccatccgagcttgttagtgcatcttgcac 401  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |    || |||| |||| |||||||| ||||||| ||||| ||    
T  49035983 tttttaaggggtttttgttcgaaccggtgtttatgtggcaaccgatttccccttgtttgtaatttttttctccacccgagcttattagtgcttcttgtac 49035884  T
Q  402 gggcttcttggttaataat 420  Q
    || ||| ||||||||||||    
T  49035883 ggacttgttggttaataat 49035865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 304 - 426
Target Start/End: Original strand, 41702867 - 41702992
Alignment:
Q  304 tggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttattttttccatccgagcttgttagtgcatcttgca 400  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||  ||||| |||| |||| || | ||| |||||||  ||||||    
T  41702867 tggtttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgttttttttctccacccaaacttattagtgctccttgca 41702966  T
Q  401 cgggcttcttggttaataattttttg 426  Q
    ||||||  |||||| ||||| |||||    
T  41702967 cgggctagttggttgataatattttg 41702992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 416
Target Start/End: Original strand, 33320710 - 33320817
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggc 405  Q
    ||||||||||| |||||||||||||||||||| |  ||||||| |||||||||||| |||   ||| ||| |||||||| ||||||| ||||||||||||    
T  33320710 tttttaagggggttttgttcgagccggtgtttgtaaggcaaccaatttccccttgttttt---tttcccacccgagcttattagtgcttcttgcacgggc 33320806  T
Q  406 ttcttggttaa 416  Q
    || ||||||||    
T  33320807 ttgttggttaa 33320817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 30655815 - 30655761
Alignment:
Q  213 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatta 267  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||    
T  30655815 gtgttgacgcaggggtatgcttgtggattgtcatttgtatatgccggcgtcatta 30655761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 298 - 438
Target Start/End: Original strand, 32678937 - 32679083
Alignment:
Q  298 ttagggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttc-----catccgagcttgttagtg 391  Q
    |||| |||||||||||||||||||||||| |||| || |||| | ||||| ||||||  |||||| ||| ||||||      ||  ||||||| ||||||    
T  32678937 ttagagtggtttttaaggggtttttgttccagccagtattttagcggcaatcgatttttccttgtattttttttttttttttcactcgagcttattagtg 32679036  T
Q  392 catcttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    | |||||||||||||| |||||||||||  ||| ||||||| |||||    
T  32679037 cgtcttgcacgggcttgttggttaataaaatttagccgtttaaaaaa 32679083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 444
Target Start/End: Original strand, 42598053 - 42598130
Alignment:
Q  367 ttttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||| |||| || ||||| ||||||| ||||||||||| || |||||||||||| ||||||||||| ||||| |||||    
T  42598053 ttttctccacccaagcttattagtgcttcttgcacgggtttgttggttaataatattttgccgttttaaaaaaaaaaa 42598130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 43397640 - 43397781
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg------tgtttattttttccatccgagcttgttagtgcat 394  Q
    ||||||||||| | |||||||||||||||| | |||||||||||||| ||||| || |||      | ||| |||||| || || ||||| ||||||| |    
T  43397640 gggtggttttttaagggtttttgttcgagcagttgttttgtggcaacagattttcctttgtatgtttttttttttttttcacccaagctt-ttagtgctt 43397738  T
Q  395 cttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||||| || ||||||||||| | ||||||| ||||||||    
T  43397739 cttgcacgggtttattggttaataa-tatttgccgattcaaaaa 43397781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 8e-41; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 295 - 431
Target Start/End: Original strand, 38908663 - 38908800
Alignment:
Q  295 gtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgttta-ttttttccatccgagcttgttagtgca 393  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||| |||||| || |||||||| ||||||||    
T  38908663 gtgttggggtggtttttaaggggtttttgttcgaaccggtgttttgtggctaccgattttcccttgtatttattttttttcacccgagcttattagtgca 38908762  T
Q  394 tcttgcacgggcttcttggttaataattttttgccgtt 431  Q
    |||||||||| ||| |||||||||||| ||||||||||    
T  38908763 tcttgcacggccttattggttaataatattttgccgtt 38908800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 301 - 428
Target Start/End: Original strand, 41419617 - 41419748
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcatct 396  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||| ||||||   ||| |||||||| |||||||||||    
T  41419617 gggtggtttttaaggggtttttgttcgagtcggtgttattatggcaaccgatttccccttgtatttgtttttttttccacccgagcttattagtgcatct 41419716  T
Q  397 tgcacgggcttcttggttaataattttttgcc 428  Q
    ||||||||||| |||||||||||| |||||||    
T  41419717 tgcacgggcttgttggttaataatattttgcc 41419748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 301 - 438
Target Start/End: Complemental strand, 14732473 - 14732334
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttcc-atccgagcttgttagtgcatcttg 398  Q
    |||||||||||||||||||||||||||||| ||| |||| | || ||||||||||||||||| ||  |||||||| | |||||||| |||||||| || |    
T  14732473 gggtggtttttaaggggtttttgttcgagctggtatttttgcggtaaccgatttccccttgtattatttttttcccacccgagcttattagtgcacctcg 14732374  T
Q  399 cacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    ||||||||| |||||||||||| ||||||| |||||||||    
T  14732373 cacgggcttgttggttaataatattttgccttttcaaaaa 14732334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 301 - 419
Target Start/End: Complemental strand, 41378332 - 41378216
Alignment:
Q  301 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttg 398  Q
    ||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||| |||    |||||||| |||||||| ||||||||||||     
T  41378332 gggtggtttttaaaggggtttttattcgagccggagtttgtgtggcaaccgatttcccctt-tgt---atttttccacccgagcttattagtgcatcttt 41378237  T
Q  399 cacgggcttcttggttaataa 419  Q
    ||||||||| |||||||||||    
T  41378236 cacgggcttgttggttaataa 41378216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 22649193 - 22649053
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttg--tggcaaccgatttccccttgtgtttattttt-tccatccgagcttgttagtgcatcttgcacgg 403  Q
    |||| |||||||||||| || ||||||||||| |  ||||||||||||||||||| | | | ||||| || | || ||||| ||||| | ||||||||||    
T  22649193 ttttaaaggggtttttgatcaagccggtgtttggaatggcaaccgatttccccttctttgtttttttctctacccaagcttattagtacttcttgcacgg 22649094  T
Q  404 gcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||| |||||||||||  |||||||| |||||||| |||||    
T  22649093 gcttgttggttaataaaattttgccgcttcaaaaaaaaaaa 22649053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Original strand, 43356750 - 43356803
Alignment:
Q  367 ttttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataat 420  Q
    |||||| || |||| ||| |||||||||||||||||| ||| ||||||||||||    
T  43356750 tttttttcacccgaacttattagtgcatcttgcacggacttattggttaataat 43356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 8e-38; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 40930961 - 40930818
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttttt-ccatccgagcttgttagtgcatcttgc 399  Q
    ||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||| | |||||||| ||| |||||||| ||||||| ||||||    
T  40930961 gggtggtttttaaggagtttttgttcgagccgttgttt-gtgacaaccgatttccccttgtttgtatttttttccacccgagcttattagtgcttcttgc 40930863  T
Q  400 acgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||| |||||||||||| ||||||| ||||||||| |||||    
T  40930862 acgggcttgttggttaataatattttgccatttcaaaaaaaaaaa 40930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 308 - 444
Target Start/End: Complemental strand, 13959347 - 13959207
Alignment:
Q  308 ttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcatcttgcacgg 403  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || |||| | ||||||||   ||| |||||||| ||| ||| ||||||||||    
T  13959347 ttttaaggggtttttgtttgagccggtgtttatgtggcaaccgattttcctttgtttgtatttttttttccacccgagcttattattgcttcttgcacgg 13959248  T
Q  404 gcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||| |||| ||||||| ||||||||||||||||| |||||    
T  13959247 gcttgttggctaataatattttgccgtttcaaaaaaaaaaa 13959207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 301 - 440
Target Start/End: Complemental strand, 24200753 - 24200614
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc 399  Q
    |||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| | | ||||||||| || ||||| ||||||| ||||||    
T  24200753 gggtggtttttaagtg-tttttgttcgagccggtgtttttgcggcaaccgatttccccttgtatgttttttttccacccaagcttattagtgcttcttgc 24200655  T
Q  400 acgggcttcttggttaataattttttgccgtttcaaaaata 440  Q
    |||| ||| ||| |||||||| |||||||| || |||||||    
T  24200654 acggacttgttgattaataatattttgccgattaaaaaata 24200614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 301 - 438
Target Start/End: Complemental strand, 25829399 - 25829259
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcatct 396  Q
    |||||||||||||||||||||| ||| ||||||||||| |  || ||||||||||||||||| | ||||||||   ||| |||||||| ||||||| |||    
T  25829399 gggtggtttttaaggggtttttattcaagccggtgtttatagggaaaccgatttccccttgtttgtatttttttttccacccgagcttattagtgcttct 25829300  T
Q  397 tgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    ||||||||||| ||||||||||| | ||||||| ||||||||    
T  25829299 tgcacgggcttgttggttaataa-tatttgccgattcaaaaa 25829259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 301 - 445
Target Start/End: Complemental strand, 5200615 - 5200469
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt-ttattttttccatccgagcttgttagtgcatcttg 398  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||| | || |||| |||| || | ||| ||||||  |||||    
T  5200615 gggtgatttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgattttcccttgtatgtttttttctccacccaaacttattagtgtttcttg 5200516  T
Q  399 cacgggcttcttggttaataattttttgccgtttcaaaaataaaaag 445  Q
    ||||| ||| |||||||||||| |||||||| || ||||| ||||||    
T  5200515 cacggacttgttggttaataatattttgccgattaaaaaaaaaaaag 5200469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 301 - 437
Target Start/End: Original strand, 22839250 - 22839391
Alignment:
Q  301 gggtggtttttaagggg-tttttgttcgagccggtgttttgt--ggcaaccgatttccccttgtgtttattttt--tccatccgagcttgttagtgcatc 395  Q
    ||||||||||||| ||| ||||||||||||||| |||||| |  |||||||||||||| ||| | | | |||||  ||||||||| ||| ||||||| ||    
T  22839250 gggtggtttttaaagggatttttgttcgagccgatgttttatatggcaaccgatttcctcttctttgtttttttcctccatccgaacttattagtgcgtc 22839349  T
Q  396 ttgcacgggcttcttggttaataattttttgccgtttcaaaa 437  Q
    |||||||||||| |||||||||||| |||||||| |||||||    
T  22839350 ttgcacgggcttgttggttaataatattttgccgattcaaaa 22839391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 38086551 - 38086402
Alignment:
Q  301 gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcat 394  Q
    |||||||||||  |||||||||||||||||||| | |||| | ||||||||||||| ||||| | | ||||||||   ||| |||||||| ||||||| |    
T  38086551 gggtggttttttaaaggggtttttgttcgagccagagtttgtatggcaaccgattttcccttctttgtatttttttctccacccgagcttattagtgcgt 38086452  T
Q  395 cttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||||||||||| |||||||||||| |||||| | ||| |||| |||||    
T  38086451 cttgcacgggcttattggttaataatattttgctgattctaaaaaaaaaa 38086402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 10124866 - 10124935
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgt--ggcaaccgatttccccttgtgtttattttttcc 374  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | | ||||||||    
T  10124866 tttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttccccttgtttgttttttttcc 10124935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 30836272 - 30836116
Alignment:
Q  301 gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttt-------tccatccgagctt----gtt 387  Q
    ||||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||||||| | ||| |||||       |||||||||||||     ||    
T  30836272 gggtggtttttaaaggggtttttgttcgagccggtatttgtgcggcaatcgatttccccttctttttttttttttttttctccatccgagcttattaatt 30836173  T
Q  388 agtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| ||| ||||| |||| |||||||||||| |||||||| |||||||| |||||    
T  30836172 agtgcttctcgcacgagcttgttggttaataatattttgccgattcaaaaaaaaaaa 30836116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 444
Target Start/End: Original strand, 7845135 - 7845184
Alignment:
Q  395 cttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  7845135 cttgcacgggcttgttggttaataatattttgccgtttcaaaaaaaaaaa 7845184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 44362994 - 44362918
Alignment:
Q  367 ttttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa 443  Q
    |||||||||||||| ||| ||||||| |||||||| || || ||||||||||||  ||| |||||||||||| ||||    
T  44362994 ttttttccatccgaacttattagtgcttcttgcacaggattgttggttaataataattttccgtttcaaaaaaaaaa 44362918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 470 - 531
Target Start/End: Complemental strand, 38542786 - 38542725
Alignment:
Q  470 cactcactctcacatcaccaacaccacttcctctcaatctcattcaaggttgttttctctta 531  Q
    |||||| |||||||||||||||| || ||||||||| | || ||||| ||||||||||||||    
T  38542786 cactcattctcacatcaccaacatcatttcctctcactttctttcaaagttgttttctctta 38542725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 584187 - 584123
Alignment:
Q  380 agcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| ||||||| ||||| |||||||| |||| ||||||| |||||||||||||| || |||||    
T  584187 agcttattagtgcttcttgtacgggcttgttggctaataatattttgccgtttcaacaaaaaaaa 584123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 7845080 - 7845138
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 360  Q
    ||||||||||||||||| ||  |||||||||||||||  ||| ||||||||||||||||||    
T  7845080 gggtggtttttaaggggatt--gttcgagccggtgttaatgttgcaaccgatttccccttg 7845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 307 - 428
Target Start/End: Original strand, 16572074 - 16572198
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatcttgcacgg 403  Q
    ||||||| ||| |||||||||| |||||||||| | |||||||||||||||||||| ||||||||||  ||| |||||||| ||||||||||| ||||||    
T  16572074 tttttaaaggggttttgttcgaaccggtgtttttgcggcaaccgatttccccttgtatttattttttttccacccgagcttattagtgcatctcgcacgg 16572173  T
Q  404 gcttcttggttaataattttttgcc 428  Q
    |||| |||||||||||| |||||||    
T  16572174 gcttgttggttaataatattttgcc 16572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 443
Target Start/End: Complemental strand, 47571694 - 47571560
Alignment:
Q  309 tttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttc-catccgagcttgttagtgcatcttgcacgggctt 407  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||| ||||||| ||||||||||  || |||||||| |||||||  ||| |||||| ||    
T  47571694 tttaaggggtttttgtttgagccggtgttt-gtggcaaccaattttcccttgtatttattttttttcacccgagcttattagtgctccttccacgggttt 47571596  T
Q  408 cttggttaataattttttgccgtttcaaaaataaaa 443  Q
     |||||||||||| |||||||| |||||||| ||||    
T  47571595 gttggttaataatattttgccgattcaaaaaaaaaa 47571560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 32183275 - 32183425
Alignment:
Q  301 gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct--tgtgtttatttt-ttccatccgagcttgttagtgcat 394  Q
    |||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||  | ||||| |||| ||||| |||||||| |||||||      
T  32183275 gggtggttttttaaaggggtttttgttcgagccggtgtttgtatggcaaccgatttccccttctttgttttttttcttccacccgagcttattagtgcgc 32183374  T
Q  395 cttgcacgggctt-cttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||||||||  |||||||||||| |||||||| || ||||| |||||    
T  32183375 cttgcacgggcttgtttggttaataatattttgccgatttaaaaaaaaaaa 32183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 342 - 438
Target Start/End: Complemental strand, 15187072 - 15186975
Alignment:
Q  342 ggcaaccgatttccccttgtgtttattttt-tccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||||||||||||||| ||  ||||| |||| || ||||| |||||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  15187072 ggcaaccgatttccccttgtattcttttttatccacccaagcttattagtgcatcttgcacgggcttgttggttaataatattttgccgattcaaaaa 15186975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 531
Target Start/End: Original strand, 5341706 - 5341793
Alignment:
Q  444 agctcctataaatatatcaacccttacactcactctcacatcaccaacaccacttcctctcaatctcattcaaggttgttttctctta 531  Q
    |||||||||||||| |  |||||| | |||||||||||||||||||||| |||||||||||| |||| |||||||| |||||||||||    
T  5341706 agctcctataaataaacaaaccctcagactcactctcacatcaccaacatcacttcctctcattctctttcaaggtcgttttctctta 5341793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 55133233 - 55133102
Alignment:
Q  304 tggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacg 402  Q
    |||||||||| |||||||||||||||| | ||||| |||||||| | ||||||| |||| | | || ||| |||||||| || ||||||| |||||||||    
T  55133233 tggtttttaaagggtttttgttcgagctgatgtttgtgtggcaatcaatttccc-ttgtttgttttcttttcatccgagtttattagtgcttcttgcacg 55133135  T
Q  403 ggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||   |||||||||| ||||| |||||||||||    
T  55133134 ggctt---ggttaataatattttgtcgtttcaaaaa 55133102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 438
Target Start/End: Complemental strand, 25641407 - 25641263
Alignment:
Q  301 gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgca 393  Q
    |||||||||||  || |||||||||||||||||| ||||  | |||||||| |||||||||| | | ||||||||    ||| || ||||| |||||||     
T  25641407 gggtggttttttaaaagggtttttgttcgagccgatgttagtatggcaaccaatttccccttctttgtattttttttctccacccaagctttttagtgct 25641308  T
Q  394 tcttgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||||||||| |||||||||||  |||||||| ||||||||    
T  25641307 tcttgcacgggcttgttggttaataacattttgccgattcaaaaa 25641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 438
Target Start/End: Complemental strand, 16662441 - 16662301
Alignment:
Q  300 agggtggtttttaa-ggggtttttgttcgagccggtgttttgt--ggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatct 396  Q
    |||||||||||||| ||||||||||| |||||| |||||||||  |||||| ||||| ||||| |   | ||||||||| |  ||||| ||||||| |||    
T  16662441 agggtggtttttaaaggggtttttgtacgagccagtgttttgtatggcaacagattttcccttcttagt-ttttttccaccttagcttattagtgcttct 16662343  T
Q  397 tgcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
     |||||||||| |||||||||||| |||||| | ||||||||    
T  16662342 cgcacgggcttgttggttaataatattttgctgattcaaaaa 16662301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 302 - 438
Target Start/End: Complemental strand, 42390906 - 42390766
Alignment:
Q  302 ggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttt---tccatccgagcttgttagtgcatctt 397  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||   |||| | ||| |||||   |||| |||||||| ||||| | ||||    
T  42390906 ggtggtttttaaggggtttttgtttgagccggtgttttagcggcaaccgattgttccttttatttgtttttttctccacccgagcttattagtacgtctt 42390807  T
Q  398 gcacgggcttcttggttaataattttttgccgtttcaaaaa 438  Q
    |||||||||| ||||  |||||  ||| |||| ||||||||    
T  42390806 gcacgggcttgttggaaaataaaatttagccgattcaaaaa 42390766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 25222218 - 25222278
Alignment:
Q  444 agctcctataaatatatcaacccttacactcactctcacatcaccaacaccacttcctctc 504  Q
    |||||||||||||| || |||| ||| |||||||||||||||||||||| ||||| |||||    
T  25222218 agctcctataaataaataaacctttatactcactctcacatcaccaacatcactttctctc 25222278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 45511440 - 45511390
Alignment:
Q  394 tcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||||||||| |||||||||||| |||||| | |||||||| |||||    
T  45511440 tcttgcacgggcttgttggttaataatattttgctgattcaaaaaaaaaaa 45511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 301 - 420
Target Start/End: Complemental strand, 23173107 - 23172985
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatctt 397  Q
    ||||||||||||||||| |||||||||||||||||||| |  |||||| |||||| |||||| | ||||||||  ||| |||||||| ||||||| ||||    
T  23173107 gggtggtttttaagggggttttgttcgagccggtgtttatagggcaactgatttctccttgtttgtattttttttccacccgagcttattagtgcttctt 23173008  T
Q  398 gcacgggcttcttggttaataat 420  Q
    |||||||||| ||||||||||||    
T  23173007 gcacgggcttgttggttaataat 23172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 301 - 426
Target Start/End: Original strand, 22887211 - 22887337
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt-ttccatccgagcttgttagtgcatcttgc 399  Q
    ||||||||||||||||||||||||| || || || |||||||||||| ||||| ||||| | ||| |||| | ||| |||||||| ||||||||||| ||    
T  22887211 gggtggtttttaaggggtttttgtttgaacctgtcttttgtggcaactgattttcccttatattttttttctcccacccgagcttattagtgcatctcgc 22887310  T
Q  400 acgggcttcttggttaataattttttg 426  Q
    |||||||| |||||||||||| |||||    
T  22887311 acgggcttgttggttaataatattttg 22887337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 9931935 - 9931785
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt-------ccatccgagcttgttagtgc 392  Q
    ||||||||||| ||| |||||||||||||| ||||||| || ||||||||||||||||| || | ||||||||       ||| || |||||||||||||    
T  9931935 gggtggtttttgaggtgtttttgttcgagctggtgtttgtgcggcaaccgatttcccctcgtttgtatttttttttcttcccacccaagcttgttagtgc 9931836  T
Q  393 atcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
     |||||||||||||| ||||||||||| | ||| |||||||||||| |||||    
T  9931835 ttcttgcacgggcttgttggttaataa-tatttaccgtttcaaaaaaaaaaa 9931785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 292 - 426
Target Start/End: Original strand, 25539810 - 25539947
Alignment:
Q  292 ttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt----tattttttccatccgagcttgtt 387  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||| ||    | |||||| || |||||||| ||    
T  25539810 ttagttttggggtggtttttaaggggtttttgttcgagccgatgtttgatggcaaccgatttcctcttgtatttttgtttttttttcacccgagcttatt 25539909  T
Q  388 agtgcatcttgcacgggcttcttggttaataattttttg 426  Q
    | ||| |||||||||||||| |||| ||||||| |||||    
T  25539910 aatgcttcttgcacgggcttgttgg-taataatattttg 25539947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 307 - 444
Target Start/End: Original strand, 10431063 - 10431204
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt--gtttattttt-tccatccgagcttgttagtgcatcttgcacg 402  Q
    |||||| | |||||||||||||| |||||||| |||||||||||||||| ||||||  |||| ||||| |||| |||| ||| ||| ||| |||||||||    
T  10431063 tttttatgaggtttttgttcgagtcggtgtttgtgtggcaaccgatttctccttgtttgtttttttttctccacccgaacttattaatgcttcttgcacg 10431162  T
Q  403 ggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    || || ||| |||||||| |||| |||||||||||| |||||    
T  10431163 ggtttgttgattaataatatttttccgtttcaaaaaaaaaaa 10431204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 427
Target Start/End: Complemental strand, 819254 - 819134
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt-tattttttccatccgagcttgttagtgcatcttgcacgggc 405  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||| || | ||||||||| |||| ||| ||||||| |||| ||||| |    
T  819254 tttttaaggggtttttgttcgagttggtg-tttgtggcaaccgatttccctttgttttattttttttccacccgaacttattagtgcttcttacacggac 819156  T
Q  406 ttcttggttaataattttttgc 427  Q
    || |||| ||||||| ||||||    
T  819155 ttattgggtaataatattttgc 819134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 443
Target Start/End: Complemental strand, 3677924 - 3677779
Alignment:
Q  301 gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt----tattttttccatccgagcttgttagtgcatct 396  Q
    ||||||||||||||||||||||||| ||||| |||| ||| |||||||||||  ||||||| ||    | ||||||||| |||||||| |||||||||||    
T  3677924 gggtggtttttaaggggtttttgtttgagccagtgtattgcggcaaccgattgtcccttgtattcttgttttttttccacccgagcttattagtgcatct 3677825  T
Q  397 tgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa 443  Q
     ||| |||||| |||| ||||||| | |||| | |||||||| ||||    
T  3677824 cgcatgggcttgttgg-taataatatattgctgattcaaaaaaaaaa 3677779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 42241708 - 42241577
Alignment:
Q  316 ggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttcc--atccgagcttgttagtgcatcttgcacgggcttcttgg 412  Q
    ||||||||||| |||||| |||| | |||| |||||||||||||| | | |||||||| |  |||||||||| |||||||||||||| ||| ||| ||||    
T  42241708 ggtttttgttcaagccggagtttgtatggcgaccgatttccccttctttgtatttttttctcatccgagcttattagtgcatcttgcccggacttattgg 42241609  T
Q  413 ttaataattttttgccgtttcaaaaataaaaa 444  Q
    |||||||| |||||||| || ||||| |||||    
T  42241608 ttaataatattttgccgattaaaaaaaaaaaa 42241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 2292168 - 2292222
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttttgt--ggcaaccgatttcccctt 359  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  2292168 tttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttcccctt 2292222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 9597800 - 9597742
Alignment:
Q  386 ttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||||| |||||||| ||||| |||||||||||| |||||||| |||||||| |||||    
T  9597800 ttagtgcttcttgcacaggcttgttggttaataatattttgccgattcaaaaaaaaaaa 9597742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 444
Target Start/End: Complemental strand, 33112844 - 33112703
Alignment:
Q  307 tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttattttttccatccga-gcttgttagtgcatcttgcacg 402  Q
    |||||||||||||||||||||||||   |||| | ||||||||||||||||||||  ||||| ||||||||  || | |||| ||||||| |||||||||    
T  33112844 tttttaaggggtttttgttcgagccaaagtttgtatggcaaccgatttccccttgcttgttttttttttcccccccaagctttttagtgcgtcttgcacg 33112745  T
Q  403 ggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| |||||||||||| |||||||| |||||||| |||||    
T  33112744 ggcttgttggttaataatattttgccgattcaaaaaaaaaaa 33112703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 10246910 - 10247049
Alignment:
Q  301 gggtggtttttaa-ggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc 399  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||| | | | |||| |||| | || | | ||||||| ||||||    
T  10246910 gggtggtttttaaaggggtttttgttcgagccggtgttgtgtgacaaccgattttcccttctttgttttttctccacctgaaccttttagtgcttcttgc 10247009  T
Q  400 acgggcttcttggttaataat-tttttgccgtttcaaaaa 438  Q
    |||||||| |||||||||||| ||||||||| || |||||    
T  10247010 acgggcttgttggttaataatatttttgccgattaaaaaa 10247049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 213 - 445
Target Start/End: Original strand, 11546685 - 11546912
Alignment:
Q  213 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggttttta 312  Q
    ||||||| |||||||||| | || |||||||||| |||||||||||||||||||| | ||||    |||||||  | | |||| | |||     ||||||    
T  11546685 gtgttgacgcaggggtattcatgaggattgtcatatgtatatgtctgcgtcattactcttgta---ggtagttccttctttaggggtagt----ttttta 11546777  T
Q  313 aggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttc-catccgagcttgttagtgcatcttgcacgggcttctt 410  Q
    ||| |||||||||||||||||||||| | || ||||||||||| |||| | | | ||||||| || |||||||| |||||||  ||||||||||||| |     
T  11546778 aggagtttttgttcgagccggtgtttgtatgacaaccgatttctccttctttgttttttttctcacccgagcttattagtgctacttgcacgggcttgtc 11546877  T
Q  411 ggttaataattttttgccgtttcaaaaataaaaag 445  Q
     ||||||||| ||||||||||| ||||| ||||||    
T  11546878 agttaataatattttgccgtttaaaaaaaaaaaag 11546912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 6575720 - 6575860
Alignment:
Q  300 agggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgcat 394  Q
    ||||||||||||||| ||||||||||||||||| ||||| | || |||| ||||| || |||||| ||||||||    ||| |||| ||| ||||||| |    
T  6575720 agggtggtttttaagaggtttttgttcgagccgatgtttgtatgacaactgattttcctttgtgtgtatttttttcttccacccgaacttattagtgctt 6575819  T
Q  395 cttgcacgggcttcttggttaataattttttgccgtttcaa 435  Q
    ||||||||||||| ||| |||||||| |||||||| |||||    
T  6575820 cttgcacgggcttgttgattaataatattttgccgattcaa 6575860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 443
Target Start/End: Original strand, 15859093 - 15859244
Alignment:
Q  301 gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccc----ttgtgtttattttttccatccgagcttgttagtgca 393  Q
    |||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||    |||| ||| |||| |||| |||||||| |||||||     
T  15859093 gggtggttttttaaaggggtttttgttcgagccggtgtttgtttggcaaccgatttccccttctttgttttttttttctccacccgagcttattagtgcg 15859192  T
Q  394 tcttgcacgggct--tcttggttaataattttttgccgtttcaaaaataaaa 443  Q
     ||||||||||||  | ||| |||||||| |||||||| ||| |||| ||||    
T  15859193 ccttgcacgggcttgttttgattaataatattttgccgattctaaaaaaaaa 15859244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 444
Target Start/End: Original strand, 34761080 - 34761306
Alignment:
Q  213 gtgttgatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggttttt- 311  Q
    ||||||| |||||||||| | || |||||||||| |||||||| ||||||||||| | ||||    |||||||  | | ||||     |||||||||||     
T  34761080 gtgttgacgcaggggtattcatgaggattgtcatatgtatatgcctgcgtcattactgttgta---ggtagttccttctttag-----gggtggtttttt 34761171  T
Q  312 aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatcttgcacgggcttc 408  Q
    |||| ||||||||||||| |||||||| | || |||||||||||  ||| | | ||||||||  ||| |||||||| |||||||  |||||||||||||     
T  34761172 aaggagtttttgttcgagtcggtgtttgtatgacaaccgatttcttcttctttgtatttttttcccacccgagcttattagtgctacttgcacgggcttg 34761271  T
Q  409 ttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    | | ||||||| | |||||||||||||||| |||||    
T  34761272 tcgtttaataa-tatttgccgtttcaaaaaaaaaaa 34761306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 33984753 - 33984814
Alignment:
Q  301 gggtggttttt-aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg 360  Q
    ||||||||||| ||||||||||||||||| || |||||| | ||||||||||||||||||||    
T  33984753 gggtggtttttgaaggggtttttgttcgaaccagtgtttgtatggcaaccgatttccccttg 33984814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 429
Target Start/End: Complemental strand, 12754465 - 12754422
Alignment:
Q  386 ttagtgcatcttgcacgggcttcttggttaataattttttgccg 429  Q
    ||||||| ||||||||||| || |||||||||||||||||||||    
T  12754465 ttagtgcgtcttgcacgggtttgttggttaataattttttgccg 12754422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 12947 - 12883
Alignment:
Q  380 agcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa 444  Q
    ||||| ||||||| ||||| |||||||| |||| ||||||| |||||||||||||| || |||||    
T  12947 agcttattagtgcttcttgtacgggcttgttggctaataatattttgccgtttcaacaaaaaaaa 12883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 442
Target Start/End: Original strand, 7956 - 8012
Alignment:
Q  386 ttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaa 442  Q
    ||||||||| |||||  ||||| |||||||||||| |||||||| || |||||||||    
T  7956 ttagtgcattttgcataggcttgttggttaataatattttgccgatttaaaaataaa 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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