View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12393_low_2 (Length: 376)
Name: NF12393_low_2
Description: NF12393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12393_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 6 - 282
Target Start/End: Original strand, 30479319 - 30479595
Alignment:
| Q |
6 |
acctaatgctctagaaagatcaggaacatgcaggaaagccaatgacaataataatacatcacatgaagataaagaagaggaagagtttaaggaagaggaa |
105 |
Q |
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| T |
30479319 |
acctaatgctctagaaagatcaggaacatgcaggaaagccaatgacaataataatacatcacatgaagataaagaagaggaagagtttaaggaagaggaa |
30479418 |
T |
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| Q |
106 |
gagattgatcctgacttagagaaagagtggtctgctcttgaaggtgtatcgcgtgtcaacacattattaaaccttccaagatttactcctgataaaggag |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
30479419 |
gagattgatcctgacttagagaaagagtggtctgctcttgaaggtgtatcgcgtgtcaacacattattaaaccttccaagatttactcctgataaagaag |
30479518 |
T |
|
| Q |
206 |
acaaagcagctgcagcagcaaggagcaaaaaactcaaatgaaataattcaaccaaggaatattaagatggcccttta |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30479519 |
acaaagcagctgcagcagcaaggagcaaaaaactcaaatgaaataattcaaccaaggaatattaagatggcccttta |
30479595 |
T |
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