View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12397_high_4 (Length: 300)
Name: NF12397_high_4
Description: NF12397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12397_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 285
Target Start/End: Complemental strand, 21467166 - 21466898
Alignment:
| Q |
17 |
cagagaactacagttaccaatctcatgaggaatagagccagagatatcattagaaatcaacaaaagctttgttaagttttgaagcttaaaaagacctgaa |
116 |
Q |
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| T |
21467166 |
cagagaactacagttaccaatctcatgaggaatagagccagagatatcattagaaatcaacaaaagctttgttaagttttgaagcttaaaaagacctgaa |
21467067 |
T |
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| Q |
117 |
ggtaaactatcactgagtgaattataagacaaatccaaagcctcaaggcttacacaatctcctaactctgatggaattctaccttcaagtttgttctgcc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21467066 |
ggtaaactatcactgagtgaattataagacaaatccaaagcctcaaggcttacacaatctcctaactctgatggaattctaccttcaagtttgttctgcc |
21466967 |
T |
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| Q |
217 |
aagcgnnnnnnnccgctagcttcgtcaactttccaatctcaactggaatcaaacctgatatctcatttg |
285 |
Q |
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||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21466966 |
aagcgaaaaaaaccgtcagcttcgtcaactttccaatctcaactggaatcaaacctgatatctcatttg |
21466898 |
T |
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