View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12397_low_6 (Length: 243)

Name: NF12397_low_6
Description: NF12397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12397_low_6
NF12397_low_6
[»] chr7 (9 HSPs)
chr7 (18-168)||(43112972-43113119)
chr7 (179-224)||(39321910-39321955)
chr7 (179-224)||(45140133-45140178)
chr7 (178-224)||(6459126-6459172)
chr7 (179-224)||(3092016-3092061)
chr7 (183-224)||(13427953-13427994)
chr7 (179-212)||(22681441-22681474)
chr7 (179-224)||(38889957-38890002)
chr7 (178-210)||(21120631-21120663)
[»] chr4 (10 HSPs)
chr4 (178-224)||(14453917-14453963)
chr4 (179-218)||(42396697-42396736)
chr4 (178-224)||(13159698-13159744)
chr4 (178-212)||(17186314-17186348)
chr4 (178-216)||(26893386-26893424)
chr4 (178-224)||(44546660-44546706)
chr4 (179-224)||(46191195-46191240)
chr4 (178-214)||(135820-135856)
chr4 (179-211)||(23002150-23002182)
chr4 (178-218)||(53084601-53084641)
[»] chr3 (4 HSPs)
chr3 (178-224)||(30045277-30045323)
chr3 (179-224)||(10773269-10773314)
chr3 (178-217)||(41748808-41748847)
chr3 (179-223)||(16898674-16898718)
[»] scaffold0153 (1 HSPs)
scaffold0153 (178-221)||(24973-25016)
[»] chr5 (6 HSPs)
chr5 (178-224)||(41211596-41211642)
chr5 (179-224)||(37414637-37414682)
chr5 (178-213)||(21825250-21825285)
chr5 (179-212)||(26397286-26397319)
chr5 (179-224)||(37268365-37268410)
chr5 (179-207)||(23264111-23264139)
[»] chr1 (4 HSPs)
chr1 (178-224)||(7637637-7637683)
chr1 (178-224)||(44955733-44955779)
chr1 (178-224)||(20819602-20819648)
chr1 (178-230)||(24509316-24509368)
[»] chr6 (3 HSPs)
chr6 (178-224)||(18489768-18489814)
chr6 (178-213)||(16477625-16477660)
chr6 (178-211)||(14781982-14782015)
[»] chr8 (1 HSPs)
chr8 (178-224)||(29934727-29934773)
[»] chr2 (2 HSPs)
chr2 (178-224)||(45701187-45701233)
chr2 (179-223)||(45468150-45468194)
[»] scaffold1822 (1 HSPs)
scaffold1822 (178-211)||(1040-1073)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 43113119 - 43112972
Alignment:
Q  18 tggttgacttttctcagatcagaagtacatgctaagtgctagctaaccttaacaaacccagaggctcacattgcctgcaaa-tctattgtccactttatt 116  Q
    |||||||||||||||||| ||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43113119 tggttgacttttctcagaccagaagtacatgctaagtgcta----accttaacaaacccagaggctcacattgcctgcaaaatctattgtccactttatt 43113024  T
Q  117 ctcgtctgctttgtcaaatatttaacaacaaaagcaaatgatgatattgatc 168  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43113023 ctcgtctgctttgtcaaatatttaacaactaaagcaaatgatgatattgatc 43112972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 39321910 - 39321955
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39321910 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 39321955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 45140133 - 45140178
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||    
T  45140133 aacaaattaaaatgggatatattgttcaaaagaaaggtgattcacc 45140178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 6459172 - 6459126
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||  ||||||||||||||||||| |||| |||||    
T  6459172 gaacaaatcaaaatgaaatatattgctcaaaagaaaagtgattcacc 6459126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 3092061 - 3092016
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||||||||| |||||||||||||||||| || |||| |||||    
T  3092061 aacaaatcaaaataggatatattgctcaaaagcaaagtgattcacc 3092016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 13427953 - 13427994
Alignment:
Q  183 aatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  13427953 aatcaaaatgaaatatattgctcaaaagaaaggtgattcacc 13427994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 22681441 - 22681474
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaa 212  Q
    ||||||||||||||| ||||||||||||||||||    
T  22681441 aacaaatcaaaatggaatatattgctcaaaagaa 22681474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 38890002 - 38889957
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||| ||||| | |||||||||||||||||||||||| |||||    
T  38890002 aacaaattaaaatagaatatattgctcaaaagaaaggtgattcacc 38889957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 21120663 - 21120631
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaag 210  Q
    |||||||||||||||| ||||||||||||||||    
T  21120663 gaacaaatcaaaatggaatatattgctcaaaag 21120631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 14453917 - 14453963
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14453917 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 14453963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 42396697 - 42396736
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtga 218  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  42396697 aacaaattaaaatggaatatattgctcaaaagaaaggtga 42396736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 13159698 - 13159744
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||| |||||||||||||| |||| |||| |||||    
T  13159698 gaacaaatcaaaatggaatatattgctcaaacgaaaagtgattcacc 13159744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 17186348 - 17186314
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaa 212  Q
    |||||||||||||||| ||||||||||||||||||    
T  17186348 gaacaaatcaaaatggaatatattgctcaaaagaa 17186314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 26893424 - 26893386
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggt 216  Q
    |||||||||||||||| || |||||||||||||||||||    
T  26893424 gaacaaatcaaaatggaatgtattgctcaaaagaaaggt 26893386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 44546706 - 44546660
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||| |||||||||||||| |||| |||| |||||    
T  44546706 gaacaaatcaaaatggaatatattgctcaaaggaaaagtgattcacc 44546660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 46191195 - 46191240
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||||||||||| |||||||||||||| |||| |||| |||||    
T  46191195 aacaaatcaaaatggaatatattgctcaaacgaaaagtgattcacc 46191240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 135820 - 135856
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaag 214  Q
    |||||||||||||||| |||||||||||||| |||||    
T  135820 gaacaaatcaaaatggaatatattgctcaaacgaaag 135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 23002182 - 23002150
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaaga 211  Q
    ||||||||||||||||||||||||| |||||||    
T  23002182 aacaaatcaaaatgggatatattgcacaaaaga 23002150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 53084601 - 53084641
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtga 218  Q
    |||||||| ||||||| ||||| ||||||||||||||||||    
T  53084601 gaacaaattaaaatggaatataatgctcaaaagaaaggtga 53084641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 30045323 - 30045277
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30045323 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 30045277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 10773314 - 10773269
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  10773314 aacaaatcaaaatgggatatattgctcaaaagaaaggtgattcacc 10773269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 41748847 - 41748808
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtg 217  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  41748847 gaacaaatcaaaatggaatatattgttcaaaagaaaggtg 41748808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 16898718 - 16898674
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcac 223  Q
    |||||||||||||| ||||||||||||||||| || |||| ||||    
T  16898718 aacaaatcaaaatgagatatattgctcaaaagcaaagtgattcac 16898674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 25016 - 24973
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatc 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25016 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatc 24973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 41211642 - 41211596
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  41211642 gaacaaatcaaaatgggatatattactcaaaagaaaggtgaatcacc 41211596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 37414637 - 37414682
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  37414637 aacaaattaaaatgggatatattgctcaaaagaaaggtgaatcacc 37414682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 21825285 - 21825250
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaa 213  Q
    |||||||||||||||| |||||||||||||||||||    
T  21825285 gaacaaatcaaaatggaatatattgctcaaaagaaa 21825250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 26397286 - 26397319
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaa 212  Q
    ||||||||||||||| ||||||||||||||||||    
T  26397286 aacaaatcaaaatggaatatattgctcaaaagaa 26397319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37268410 - 37268365
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||||||||||| |||||||||||||| |||| |||| |||||    
T  37268410 aacaaatcaaaatggaatatattgctcaaaggaaaagtgattcacc 37268365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 23264111 - 23264139
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaa 207  Q
    |||||||||||||||||||||||||||||    
T  23264111 aacaaatcaaaatgggatatattgctcaa 23264139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 7637637 - 7637683
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7637637 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgattcacc 7637683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 44955779 - 44955733
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44955779 gaacaaatcaaaatgggatatattgctcaaaaaaaaggtgaatcacc 44955733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 20819602 - 20819648
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||    
T  20819602 gaacaaatcaaaatggaatatattgctcaaaagaaaagtgattcacc 20819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 24509316 - 24509368
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacctgcaca 230  Q
    |||||||||||||||| ||||||||||||||||||  |||| ||||| |||||    
T  24509316 gaacaaatcaaaatggaatatattgctcaaaagaagagtgattcacccgcaca 24509368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 18489814 - 18489768
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||    
T  18489814 gaacaaatcaaaatggaatatattgctcaaaagaaaggtgattcacc 18489768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 16477625 - 16477660
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaa 213  Q
    |||||||||||||||| |||||||||||||||||||    
T  16477625 gaacaaatcaaaatggaatatattgctcaaaagaaa 16477660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 14781982 - 14782015
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaaga 211  Q
    |||||||||||||||| |||||||||||||||||    
T  14781982 gaacaaatcaaaatggaatatattgctcaaaaga 14782015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 29934773 - 29934727
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||||    
T  29934773 gaacaaatcaaaatggaatatattgctcaaaagagaggtgattcacc 29934727  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 45701187 - 45701233
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcacc 224  Q
    |||||||||||||||| |||||||||| |||||||| |||| |||||    
T  45701187 gaacaaatcaaaatggaatatattgcttaaaagaaaagtgattcacc 45701233  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 45468150 - 45468194
Alignment:
Q  179 aacaaatcaaaatgggatatattgctcaaaagaaaggtgaatcac 223  Q
    ||||||||||||||| |||||||| |||||||||| |||| ||||    
T  45468150 aacaaatcaaaatggaatatattgttcaaaagaaaagtgattcac 45468194  T

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Target: scaffold1822 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 1040 - 1073
Alignment:
Q  178 gaacaaatcaaaatgggatatattgctcaaaaga 211  Q
    |||||||||||||||||||||||||| |||||||    
T  1040 gaacaaatcaaaatgggatatattgcacaaaaga 1073  T

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