View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12398_high_1_N (Length: 327)

Name: NF12398_high_1_N
Description: NF12398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12398_high_1_N
NF12398_high_1_N
[»] chr5 (17 HSPs)
chr5 (16-327)||(38816628-38816932)
chr5 (117-192)||(19820428-19820503)
chr5 (37-166)||(22423764-22423895)
chr5 (125-192)||(22013364-22013431)
chr5 (118-170)||(6326332-6326384)
chr5 (118-192)||(42469171-42469245)
chr5 (35-84)||(8420075-8420124)
chr5 (118-167)||(15410483-15410532)
chr5 (37-89)||(9929668-9929720)
chr5 (69-153)||(3966492-3966577)
chr5 (119-177)||(15382442-15382500)
chr5 (35-65)||(24906250-24906280)
chr5 (120-153)||(6035472-6035505)
chr5 (117-153)||(17123037-17123073)
chr5 (126-170)||(21522722-21522766)
chr5 (126-170)||(21533288-21533332)
chr5 (117-153)||(27144452-27144488)
[»] chr7 (26 HSPs)
chr7 (118-192)||(27944991-27945065)
chr7 (118-192)||(24105629-24105702)
chr7 (67-149)||(29787354-29787435)
chr7 (117-170)||(11722132-11722185)
chr7 (69-179)||(24339605-24339716)
chr7 (86-167)||(19206025-19206107)
chr7 (117-160)||(21828439-21828482)
chr7 (69-153)||(32308109-32308194)
chr7 (37-147)||(11700798-11700909)
chr7 (117-177)||(1433419-1433479)
chr7 (37-197)||(7328639-7328805)
chr7 (121-192)||(2034392-2034462)
chr7 (117-168)||(2425767-2425818)
chr7 (121-160)||(26019669-26019708)
chr7 (117-192)||(43027503-43027578)
chr7 (118-177)||(43249958-43250017)
chr7 (117-159)||(8046061-8046103)
chr7 (86-153)||(22484014-22484082)
chr7 (117-159)||(23191879-23191921)
chr7 (117-167)||(26733279-26733329)
chr7 (74-148)||(30731031-30731104)
chr7 (77-150)||(11072290-11072362)
chr7 (36-65)||(17852091-17852120)
chr7 (119-168)||(49107795-49107844)
chr7 (37-65)||(15680900-15680928)
chr7 (117-153)||(20549780-20549816)
[»] chr6 (30 HSPs)
chr6 (69-170)||(10294079-10294181)
chr6 (117-177)||(9027143-9027203)
chr6 (117-192)||(853893-853968)
chr6 (69-177)||(16766662-16766771)
chr6 (117-177)||(5000660-5000720)
chr6 (37-177)||(5732474-5732604)
chr6 (124-192)||(8365560-8365628)
chr6 (118-190)||(12696277-12696348)
chr6 (37-167)||(8805524-8805656)
chr6 (69-177)||(9107355-9107464)
chr6 (117-168)||(9629357-9629408)
chr6 (117-192)||(30866178-30866253)
chr6 (118-192)||(6389693-6389767)
chr6 (117-167)||(9658854-9658904)
chr6 (117-155)||(19040339-19040377)
chr6 (124-192)||(3398569-3398637)
chr6 (117-177)||(7938081-7938141)
chr6 (118-166)||(13851712-13851760)
chr6 (37-84)||(426478-426525)
chr6 (118-177)||(7977865-7977924)
chr6 (117-160)||(20371144-20371187)
chr6 (118-192)||(10649278-10649352)
chr6 (35-65)||(34073276-34073306)
chr6 (74-177)||(34073337-34073441)
chr6 (117-170)||(426548-426601)
chr6 (37-78)||(2117134-2117175)
chr6 (117-158)||(7265627-7265668)
chr6 (117-169)||(8777007-8777059)
chr6 (117-153)||(10339160-10339196)
chr6 (117-177)||(34595099-34595159)
[»] chr8 (14 HSPs)
chr8 (69-170)||(22651948-22652050)
chr8 (69-175)||(29510289-29510396)
chr8 (124-192)||(25192388-25192456)
chr8 (117-183)||(926822-926888)
chr8 (117-170)||(27213519-27213572)
chr8 (124-192)||(126390-126457)
chr8 (117-192)||(13436998-13437073)
chr8 (117-160)||(31109552-31109595)
chr8 (118-160)||(17751657-17751699)
chr8 (118-160)||(17760644-17760686)
chr8 (117-179)||(24362236-24362298)
chr8 (117-150)||(39954313-39954346)
chr8 (117-157)||(31236611-31236651)
chr8 (84-160)||(37283812-37283887)
[»] chr2 (19 HSPs)
chr2 (81-192)||(21782817-21782927)
chr2 (128-192)||(33519736-33519800)
chr2 (117-192)||(20539708-20539783)
chr2 (86-177)||(4332891-4332981)
chr2 (117-167)||(21616737-21616787)
chr2 (119-192)||(19536434-19536507)
chr2 (120-193)||(23717976-23718048)
chr2 (120-193)||(24105648-24105720)
chr2 (37-84)||(19536361-19536408)
chr2 (37-84)||(19574031-19574078)
chr2 (86-144)||(1327976-1328033)
chr2 (38-84)||(18255945-18255991)
chr2 (38-84)||(34691770-34691816)
chr2 (38-84)||(34714182-34714228)
chr2 (69-167)||(36409614-36409711)
chr2 (92-177)||(18276486-18276570)
chr2 (126-191)||(21624217-21624282)
chr2 (37-73)||(42511322-42511358)
chr2 (69-142)||(44860320-44860394)
[»] scaffold0306 (1 HSPs)
scaffold0306 (117-193)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (37-192)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (117-193)||(21902-21978)
[»] chr1 (19 HSPs)
chr1 (117-169)||(6427323-6427375)
chr1 (117-177)||(40917716-40917776)
chr1 (117-176)||(398799-398858)
chr1 (37-90)||(48547938-48547991)
chr1 (117-169)||(2896155-2896207)
chr1 (38-184)||(10572535-10572690)
chr1 (118-193)||(5376535-5376609)
chr1 (117-161)||(12443494-12443538)
chr1 (117-153)||(17831565-17831601)
chr1 (117-153)||(36878450-36878486)
chr1 (78-170)||(1486703-1486796)
chr1 (77-177)||(38503285-38503386)
chr1 (124-179)||(48040503-48040558)
chr1 (92-170)||(1262856-1262933)
chr1 (117-167)||(9709795-9709845)
chr1 (117-167)||(34298411-34298461)
chr1 (138-192)||(39130822-39130876)
chr1 (117-150)||(43492528-43492561)
chr1 (117-153)||(19562655-19562691)
[»] chr3 (23 HSPs)
chr3 (117-192)||(8383207-8383282)
chr3 (117-191)||(8587055-8587129)
chr3 (80-179)||(5441029-5441128)
chr3 (67-156)||(8039818-8039908)
chr3 (118-177)||(24205076-24205135)
chr3 (126-192)||(8842280-8842346)
chr3 (96-161)||(5407261-5407325)
chr3 (117-177)||(28917966-28918026)
chr3 (118-177)||(4991002-4991061)
chr3 (124-183)||(10335327-10335386)
chr3 (117-156)||(13620798-13620837)
chr3 (69-192)||(25064859-25064981)
chr3 (117-192)||(55401025-55401100)
chr3 (35-73)||(4466538-4466576)
chr3 (35-65)||(5440965-5440995)
chr3 (124-170)||(7171474-7171520)
chr3 (118-168)||(9800014-9800064)
chr3 (35-73)||(13807237-13807275)
chr3 (117-191)||(32429414-32429488)
chr3 (117-169)||(2620087-2620139)
chr3 (117-177)||(15796328-15796388)
chr3 (117-169)||(26492239-26492291)
chr3 (37-73)||(27505334-27505370)
[»] scaffold0168 (3 HSPs)
scaffold0168 (37-183)||(21002-21149)
scaffold0168 (37-98)||(21217-21278)
scaffold0168 (37-98)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (117-177)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (118-177)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (69-177)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (118-159)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (67-152)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (117-189)||(178853-178925)
scaffold0018 (118-159)||(192284-192325)
[»] chr4 (7 HSPs)
chr4 (117-177)||(23293020-23293080)
chr4 (118-153)||(35723420-35723455)
chr4 (119-153)||(17345451-17345485)
chr4 (118-175)||(847918-847975)
chr4 (117-170)||(36635296-36635349)
chr4 (37-81)||(18844423-18844467)
chr4 (37-73)||(28470448-28470484)
[»] scaffold0450 (1 HSPs)
scaffold0450 (37-65)||(8564-8592)
[»] scaffold0027 (1 HSPs)
scaffold0027 (35-83)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 38816628 - 38816932
Alignment:
Q  16 tatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatag 115  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38816628 tatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatactgaaatatag 38816727  T
Q  116 cgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggttaccgttcaattatt 215  Q
    |||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38816728 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc-------ggagtccgtattagtgcttcatagtatatggttaccgttcaattatt 38816820  T
Q  216 ctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 315  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816821 ctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 38816920  T
Q  316 gactctctgttg 327  Q
    ||||||||||||    
T  38816921 gactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||| |||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattact 133  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | ||||||||||||||| |    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  134 agcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  125 caaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||| |||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||| || | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||| |||||| ||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 89  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||| ||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  119 ttttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||| |||||||| |||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  35 aactatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  120 tttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    |||||||||||| |||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  126 aaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||| |||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  126 aaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||| |||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||| |||||||| |||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  67 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgt 149  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | ||||||||||||||| |||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||||||||  ||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| |||||||| |||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  167 ccggagtccgtat 179  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  86 acaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||||||||  ||||||||||| ||| | ||||||||||||||| |||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattacta 134  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||| ||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  135 gcggtgtcggcgt 147  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||| || |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 129  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  130 tactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 197  Q
    || |||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  121 ttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||| ||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||||||||||| || ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 26019669 - 26019708
Alignment:
Q  121 ttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  26019669 ttctcaaattactagcggtgccggcgtgtcaggatccgtg 26019708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| |||||||| |||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||||||||| || | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  86 acaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||  |||||| |||| ||| || ||||||| |||||| |||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgt 159  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||| |||||||| ||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  74 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtg 148  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||| | ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  77 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtc 150  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| |||||||| || |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 65
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  36 actatgaagcacggacactcctcgaattag 65  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  119 ttttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||||||||| |||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  37 ctatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||| ||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  167 ccgg 170  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| |||||||| |||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| |||||||| |||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  167 ccggagtccgt 177  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagc 136  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | ||||||||||||||| || |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  137 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||| |||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 190  Q
    ||||| |||||||| |||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattact 133  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | ||||||||||||||| |    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  134 agcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| |||||||| |||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  167 ccggagtccgt 177  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||||||||||| | ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||| ||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||||||||| || | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||||||| |||||| ||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtat 155  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||| |||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| |||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||| ||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||| |||||||| |||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 10649352 - 10649278
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||| ||||||||||| |||||||||||| ||| | |  ||| ||| ||||| |||||||| ||||||||||||    
T  10649352 attttatcaaattactaacggtgtcggcgtatcattgtttgtgtcgtatccggtgtccgtatccgtgcttcatag 10649278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  35 aactatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  74 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 171  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||| ||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  172 gtccgt 177  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||| |||||||| || | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacac 78  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccg 158  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 10339160 - 10339196
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| | |||||||||||||||||||    
T  10339160 gattttctcaaattaatcgcggtgtcggcgtgtcagt 10339196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| |||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| |||||||| |||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  167 ccgg 170  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| |||||||| |||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  167 ccggagtcc 175  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||| |||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
    ||||||||||||||| |||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||||||| |||||| |||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||||| ||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| |||||||| |||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 17751699 - 17751657
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||    
T  17751699 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtg 17751657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 17760686 - 17760644
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||    
T  17760686 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtg 17760644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 179  Q
    |||| |||||||||| |||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtc 150  Q
    ||||||||||||||| ||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatcc 157  Q
    ||||||||||||||| |||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  84 ccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtg 160  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| |||| |||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  81 acaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 180  Q
    |||| |||||| |||||||||| | |||| ||| | ||||||||||||||| |||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  181 cgtgcttcatag 192  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  128 attactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||| |||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| |||||||| |||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  86 acaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||||||||| | |||| ||| | ||||||| ||||||| || | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||||||||||| |||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  119 ttttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||| |||||||| |||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  120 tttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||||||||||| |||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  120 tttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    |||||||||||| |||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 19574078 - 19574031
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacac 19574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  86 acaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcgg 144  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||| ||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 84  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||  |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  92 acacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||| | |||| || || ||||||||||||||| ||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  126 aaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||| |||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtc 142  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||| ||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||||||||||||| |||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  37 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 131  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  132 ctagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
     |||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||||||||||||| |||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 176  Q
    |||||| |||||||| ||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 90  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  38 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 127  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  128 attactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 184  Q
    |||| ||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 193  Q
    ||||||| |||||| ||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgc 161  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  78 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| |||||||| |||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  77 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 174  Q
    |||||||  |||||||||||||  |||| | |||||||||  ||||||||||||||| |||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  175 cgt 177  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 179  Q
    |||||||| || | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  92 acacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    |||| |||||||| |||| ||| | ||||||||||||||| |||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||||||||||| ||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtc 167  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 39130822 - 39130876
Alignment:
Q  138 gtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130822 gtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 43492528 - 43492561
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtc 150  Q
    ||||||||||||||||||| ||||||||||||||    
T  43492528 gattttctcaaattactagtggtgtcggcgtgtc 43492561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    ||||||||||||||| ||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  80 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 178  Q
    ||||| ||||||||||||||||  | |||| ||| | ||||||||||||||  |||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  67 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatc 156  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||| ||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||||||||| || | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  126 aaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| ||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  96 ataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgc 161  Q
    ||||||| |||||| ||| | ||||||||||||||  |||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| ||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    ||||||||||| || |||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
    |||||||| |||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 13620798 - 13620837
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatc 156  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  13620798 gattttctcaaattactagcggtgtcgacatgtcagtatc 13620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  69 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| | ||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  169 ggagtccgtattcgtgcttcatag 192  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 192  Q
    |||||| |||||||| |||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtcc 73  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  35 aactatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 7171520 - 7171474
Alignment:
Q  124 tcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||| ||| |||||||| |||||||||||||| |||||||||    
T  7171520 tcaaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccgg 7171474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtcc 168  Q
    |||||||||||||| ||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 191  Q
    |||||||| |||||| ||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    ||||||||||||| | ||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| || | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccg 169  Q
    |||||| |||||||| ||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattacta 134  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | ||||||||  |||||||||  ||  ||| | ||||||||||||||| ||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  135 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 183  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 98  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 98  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| |||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||||||||||| || | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  69 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgt 166  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  ||||||| |||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  167 ccggagtccgt 177  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgt 159  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  67 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattactagcggtgtcggcgtgtcag 152  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||| | ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 189  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgt 159  Q
    |||||||||||||| || |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 177  Q
    |||||| |||||||| |||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    |||||||||||||| |||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  119 ttttctcaaattactagcggtgtcggcgtgtcagt 153  Q
    ||||||||||||| |||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  118 attttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 175  Q
    |||||||||||||| ||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  117 gattttctcaaattactagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 170  Q
    ||||||||||||||| ||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 81  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  37 ctatgaagcacggacactcctcgaattagccatgtcc 73  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  37 ctatgaagcacggacactcctcgaattag 65  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  35 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 83  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

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