View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12399_low_32 (Length: 235)

Name: NF12399_low_32
Description: NF12399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12399_low_32
NF12399_low_32
[»] chr4 (35 HSPs)
chr4 (90-221)||(15044938-15045069)
chr4 (90-220)||(15109356-15109486)
chr4 (90-222)||(41165951-41166083)
chr4 (90-221)||(47535071-47535202)
chr4 (92-221)||(52265514-52265643)
chr4 (90-221)||(13809516-13809647)
chr4 (90-221)||(7964718-7964848)
chr4 (90-221)||(18276544-18276675)
chr4 (90-222)||(7185849-7185981)
chr4 (90-221)||(15013289-15013419)
chr4 (90-221)||(41256376-41256506)
chr4 (93-221)||(14901345-14901472)
chr4 (93-221)||(27961084-27961212)
chr4 (92-203)||(38764821-38764932)
chr4 (90-212)||(18238172-18238294)
chr4 (132-221)||(40904940-40905029)
chr4 (96-212)||(13442691-13442807)
chr4 (132-221)||(18494334-18494422)
chr4 (90-221)||(12837206-12837337)
chr4 (96-212)||(47468363-47468479)
chr4 (96-208)||(50219959-50220071)
chr4 (96-212)||(54398499-54398615)
chr4 (132-221)||(30232503-30232591)
chr4 (90-212)||(13590089-13590211)
chr4 (90-212)||(41916741-41916863)
chr4 (136-221)||(20813553-20813638)
chr4 (90-221)||(16732279-16732410)
chr4 (137-221)||(30458060-30458144)
chr4 (142-221)||(54118266-54118344)
chr4 (137-203)||(40885594-40885659)
chr4 (121-221)||(37957031-37957131)
chr4 (144-203)||(21417471-21417530)
chr4 (143-221)||(10104272-10104349)
chr4 (143-221)||(15675111-15675188)
chr4 (142-222)||(122052-122131)
[»] chr5 (35 HSPs)
chr5 (90-220)||(5450850-5450980)
chr5 (90-221)||(19862319-19862450)
chr5 (90-221)||(28902301-28902432)
chr5 (90-221)||(28938696-28938827)
chr5 (94-219)||(432577-432702)
chr5 (93-221)||(16595621-16595748)
chr5 (90-218)||(7728530-7728658)
chr5 (90-221)||(3673972-3674103)
chr5 (90-221)||(21310715-21310846)
chr5 (109-221)||(21222614-21222726)
chr5 (90-211)||(21297191-21297312)
chr5 (104-214)||(22885766-22885876)
chr5 (96-221)||(21617132-21617257)
chr5 (96-221)||(29918081-29918206)
chr5 (90-199)||(37983474-37983583)
chr5 (137-221)||(23981522-23981606)
chr5 (90-203)||(26559839-26559952)
chr5 (90-214)||(24084187-24084311)
chr5 (96-221)||(6456740-6456862)
chr5 (122-221)||(32966155-32966254)
chr5 (96-209)||(21109866-21109979)
chr5 (92-220)||(1168211-1168339)
chr5 (136-221)||(23494075-23494160)
chr5 (133-221)||(11337192-11337280)
chr5 (132-220)||(19405690-19405778)
chr5 (90-212)||(23234500-23234622)
chr5 (132-180)||(23466589-23466637)
chr5 (136-190)||(21906855-21906909)
chr5 (144-208)||(11763523-11763587)
chr5 (153-212)||(19873934-19873993)
chr5 (142-221)||(23507128-23507206)
chr5 (142-209)||(29188306-29188372)
chr5 (143-221)||(18531089-18531166)
chr5 (136-221)||(20712232-20712317)
chr5 (140-221)||(24183138-24183219)
[»] scaffold0243 (1 HSPs)
scaffold0243 (90-221)||(2322-2453)
[»] chr7 (47 HSPs)
chr7 (90-221)||(13377639-13377770)
chr7 (90-221)||(17223944-17224075)
chr7 (90-199)||(16919669-16919778)
chr7 (93-222)||(49047679-49047808)
chr7 (90-221)||(9838989-9839120)
chr7 (96-222)||(48356760-48356886)
chr7 (109-221)||(16914934-16915046)
chr7 (110-221)||(9611438-9611549)
chr7 (115-214)||(34241220-34241319)
chr7 (90-221)||(14271905-14272036)
chr7 (90-221)||(28722220-28722351)
chr7 (130-221)||(13274927-13275018)
chr7 (96-221)||(14935476-14935601)
chr7 (96-221)||(15363069-15363194)
chr7 (96-212)||(38424335-38424451)
chr7 (90-211)||(4484837-4484958)
chr7 (90-214)||(20583567-20583691)
chr7 (96-214)||(15358913-15359031)
chr7 (90-221)||(14940865-14940993)
chr7 (90-214)||(31501283-31501407)
chr7 (96-221)||(15368464-15368586)
chr7 (90-212)||(8267743-8267865)
chr7 (90-221)||(12248126-12248258)
chr7 (90-221)||(4446322-4446453)
chr7 (90-212)||(13448842-13448964)
chr7 (90-212)||(28390422-28390544)
chr7 (123-212)||(9319578-9319667)
chr7 (117-221)||(26070270-26070374)
chr7 (117-221)||(26094057-26094161)
chr7 (123-211)||(33559790-33559878)
chr7 (90-222)||(12759097-12759229)
chr7 (90-212)||(4438893-4439015)
chr7 (90-212)||(9723822-9723944)
chr7 (90-212)||(17947607-17947729)
chr7 (132-213)||(16570019-16570100)
chr7 (132-213)||(16595562-16595643)
chr7 (136-222)||(12369845-12369931)
chr7 (90-190)||(11287527-11287627)
chr7 (136-221)||(13862935-13863020)
chr7 (144-212)||(8563362-8563430)
chr7 (144-212)||(45149748-45149816)
chr7 (144-212)||(46474166-46474234)
chr7 (142-208)||(16478985-16479050)
chr7 (137-209)||(13321173-13321245)
chr7 (140-221)||(44865391-44865472)
chr7 (136-221)||(45452174-45452259)
chr7 (136-220)||(3895181-3895265)
[»] chr2 (30 HSPs)
chr2 (90-221)||(68102-68233)
chr2 (90-221)||(22775211-22775342)
chr2 (90-221)||(22780589-22780720)
chr2 (90-221)||(43646003-43646134)
chr2 (90-217)||(31146191-31146318)
chr2 (90-222)||(24884796-24884928)
chr2 (90-221)||(24571298-24571429)
chr2 (90-212)||(9636855-9636977)
chr2 (90-165)||(25305556-25305631)
chr2 (120-221)||(722531-722632)
chr2 (161-221)||(23821645-23821705)
chr2 (161-221)||(23830724-23830784)
chr2 (96-212)||(24277877-24277993)
chr2 (91-221)||(22579868-22579998)
chr2 (90-220)||(19666638-19666768)
chr2 (132-221)||(19660032-19660121)
chr2 (117-214)||(25602161-25602258)
chr2 (121-221)||(3253-3353)
chr2 (132-212)||(16292816-16292896)
chr2 (117-221)||(28974186-28974290)
chr2 (137-220)||(19669116-19669199)
chr2 (144-219)||(24087395-24087470)
chr2 (117-214)||(27261940-27262037)
chr2 (109-221)||(24294529-24294641)
chr2 (142-222)||(43642978-43643057)
chr2 (179-221)||(25305630-25305672)
chr2 (140-221)||(271330-271411)
chr2 (140-221)||(4448139-4448220)
chr2 (132-221)||(36890691-36890780)
chr2 (143-209)||(25265424-25265489)
[»] chr6 (38 HSPs)
chr6 (90-221)||(21623278-21623409)
chr6 (90-221)||(18399048-18399179)
chr6 (90-222)||(22361770-22361902)
chr6 (91-222)||(18381688-18381819)
chr6 (90-222)||(21411055-21411186)
chr6 (96-221)||(25367242-25367368)
chr6 (90-203)||(25651347-25651460)
chr6 (109-221)||(18629614-18629726)
chr6 (110-221)||(17557024-17557134)
chr6 (92-219)||(28195101-28195228)
chr6 (90-221)||(17083204-17083334)
chr6 (90-214)||(22848125-22848249)
chr6 (90-221)||(29605560-29605690)
chr6 (132-212)||(19854307-19854387)
chr6 (109-221)||(33538376-33538487)
chr6 (90-212)||(22462112-22462234)
chr6 (90-212)||(34966977-34967099)
chr6 (90-222)||(19672396-19672528)
chr6 (96-212)||(23222867-23222983)
chr6 (90-212)||(17013654-17013776)
chr6 (96-212)||(23222032-23222148)
chr6 (90-221)||(33324803-33324933)
chr6 (136-222)||(16106672-16106758)
chr6 (140-221)||(16887798-16887879)
chr6 (138-221)||(15740387-15740470)
chr6 (90-221)||(35136019-35136149)
chr6 (139-221)||(16086176-16086258)
chr6 (93-211)||(32352160-32352278)
chr6 (144-213)||(31467611-31467680)
chr6 (117-190)||(31628405-31628478)
chr6 (144-208)||(21931368-21931432)
chr6 (142-209)||(14626152-14626218)
chr6 (142-221)||(23153610-23153688)
chr6 (140-194)||(15079742-15079795)
chr6 (136-222)||(18570435-18570521)
chr6 (136-214)||(18777302-18777380)
chr6 (90-180)||(29160350-29160440)
chr6 (136-221)||(32898946-32899031)
[»] chr3 (52 HSPs)
chr3 (90-221)||(30207326-30207457)
chr3 (90-214)||(3576451-3576575)
chr3 (93-221)||(17191654-17191782)
chr3 (93-220)||(12488733-12488860)
chr3 (90-221)||(14059219-14059350)
chr3 (90-221)||(39656636-39656767)
chr3 (110-221)||(47784772-47784883)
chr3 (110-221)||(17204811-17204922)
chr3 (90-221)||(17139618-17139749)
chr3 (90-193)||(11328995-11329098)
chr3 (90-221)||(16880233-16880364)
chr3 (90-214)||(12953074-12953198)
chr3 (90-221)||(9590760-9590891)
chr3 (90-221)||(12560242-12560373)
chr3 (94-221)||(15876182-15876309)
chr3 (90-214)||(14814778-14814902)
chr3 (109-214)||(34560028-34560133)
chr3 (90-221)||(14295548-14295680)
chr3 (90-221)||(14301175-14301307)
chr3 (117-221)||(55440854-55440958)
chr3 (90-221)||(6228631-6228762)
chr3 (96-212)||(31412348-31412464)
chr3 (132-221)||(13301475-13301564)
chr3 (132-221)||(13312131-13312220)
chr3 (96-218)||(4162214-4162336)
chr3 (144-221)||(15517795-15517872)
chr3 (90-211)||(41661675-41661796)
chr3 (90-218)||(4145823-4145950)
chr3 (132-220)||(11882225-11882313)
chr3 (137-221)||(14080666-14080750)
chr3 (90-221)||(54424122-54424253)
chr3 (132-203)||(33368951-33369022)
chr3 (109-212)||(50313316-50313419)
chr3 (117-198)||(3578226-3578307)
chr3 (117-222)||(8631927-8632032)
chr3 (136-221)||(19260845-19260930)
chr3 (90-191)||(43427552-43427653)
chr3 (132-212)||(8604977-8605057)
chr3 (147-212)||(10913053-10913118)
chr3 (136-221)||(17100809-17100894)
chr3 (136-221)||(17101494-17101579)
chr3 (162-222)||(11196324-11196384)
chr3 (90-221)||(17522895-17523026)
chr3 (144-212)||(38375711-38375779)
chr3 (136-220)||(50112058-50112142)
chr3 (144-203)||(11402754-11402813)
chr3 (90-177)||(11638467-11638554)
chr3 (142-221)||(15859046-15859124)
chr3 (142-221)||(51158040-51158118)
chr3 (90-195)||(11061037-11061143)
chr3 (140-222)||(14298581-14298663)
chr3 (140-222)||(14304208-14304290)
[»] chr1 (29 HSPs)
chr1 (90-221)||(16646022-16646153)
chr1 (90-221)||(16656748-16656879)
chr1 (90-221)||(20177285-20177416)
chr1 (90-212)||(37233875-37233997)
chr1 (112-221)||(13376865-13376974)
chr1 (93-222)||(51627669-51627798)
chr1 (90-221)||(17609038-17609169)
chr1 (90-221)||(21195124-21195255)
chr1 (121-221)||(19603238-19603338)
chr1 (98-213)||(8537924-8538039)
chr1 (98-213)||(8603163-8603278)
chr1 (96-212)||(5768184-5768300)
chr1 (138-222)||(20955444-20955528)
chr1 (109-221)||(38033680-38033792)
chr1 (110-221)||(52400761-52400872)
chr1 (90-212)||(40436284-40436406)
chr1 (138-221)||(27674954-27675037)
chr1 (132-221)||(27329762-27329850)
chr1 (123-212)||(49997296-49997385)
chr1 (137-221)||(22143367-22143451)
chr1 (153-221)||(22829431-22829499)
chr1 (96-212)||(25093975-25094091)
chr1 (132-221)||(21718380-21718469)
chr1 (153-221)||(36356299-36356367)
chr1 (117-220)||(9784071-9784174)
chr1 (143-221)||(20445843-20445920)
chr1 (143-220)||(37844473-37844549)
chr1 (142-209)||(2116418-2116484)
chr1 (136-221)||(35054912-35054997)
[»] scaffold0483 (1 HSPs)
scaffold0483 (90-214)||(6771-6895)
[»] chr8 (38 HSPs)
chr8 (93-221)||(21198158-21198286)
chr8 (103-221)||(17285327-17285445)
chr8 (90-222)||(22981383-22981515)
chr8 (90-221)||(23837308-23837439)
chr8 (90-218)||(38533759-38533887)
chr8 (90-221)||(26011604-26011735)
chr8 (96-222)||(15933414-15933540)
chr8 (96-211)||(25296274-25296389)
chr8 (109-221)||(5854743-5854855)
chr8 (94-221)||(22735844-22735971)
chr8 (96-211)||(25758294-25758409)
chr8 (90-220)||(39446773-39446903)
chr8 (90-221)||(29306527-29306658)
chr8 (90-212)||(33172338-33172460)
chr8 (90-221)||(33528535-33528666)
chr8 (90-221)||(23149888-23150020)
chr8 (96-212)||(24552585-24552701)
chr8 (109-221)||(45465132-45465244)
chr8 (90-221)||(18261477-18261608)
chr8 (90-213)||(22742874-22742997)
chr8 (90-212)||(45558952-45559074)
chr8 (96-221)||(38635654-38635779)
chr8 (110-222)||(33611058-33611170)
chr8 (90-203)||(19331341-19331451)
chr8 (142-217)||(23151843-23151918)
chr8 (117-222)||(20561636-20561741)
chr8 (96-212)||(18041547-18041663)
chr8 (148-220)||(23158329-23158401)
chr8 (90-212)||(22497224-22497346)
chr8 (96-214)||(37653629-37653747)
chr8 (121-221)||(15969962-15970062)
chr8 (155-221)||(27233096-27233162)
chr8 (136-221)||(20481761-20481846)
chr8 (140-221)||(20573198-20573279)
chr8 (142-209)||(6774280-6774346)
chr8 (142-221)||(16404997-16405075)
chr8 (142-209)||(24549145-24549211)
chr8 (132-188)||(20653944-20654000)
[»] scaffold0053 (1 HSPs)
scaffold0053 (90-220)||(76854-76984)
[»] scaffold0162 (1 HSPs)
scaffold0162 (93-221)||(7031-7159)
[»] scaffold0013 (1 HSPs)
scaffold0013 (90-221)||(35588-35719)
[»] scaffold0150 (1 HSPs)
scaffold0150 (93-221)||(28649-28777)
[»] scaffold0022 (5 HSPs)
scaffold0022 (90-221)||(102928-103059)
scaffold0022 (90-217)||(109700-109827)
scaffold0022 (96-212)||(131931-132047)
scaffold0022 (117-221)||(112551-112655)
scaffold0022 (144-212)||(67972-68040)
[»] scaffold0700 (1 HSPs)
scaffold0700 (90-221)||(2635-2766)
[»] scaffold0521 (1 HSPs)
scaffold0521 (90-217)||(11204-11331)
[»] scaffold0031 (3 HSPs)
scaffold0031 (90-221)||(97204-97335)
scaffold0031 (132-221)||(70766-70854)
scaffold0031 (117-221)||(31181-31284)
[»] scaffold0589 (1 HSPs)
scaffold0589 (107-221)||(7932-8046)
[»] scaffold0092 (1 HSPs)
scaffold0092 (107-221)||(3446-3560)
[»] scaffold0080 (2 HSPs)
scaffold0080 (115-220)||(43805-43910)
scaffold0080 (90-214)||(23685-23809)
[»] scaffold0032 (2 HSPs)
scaffold0032 (90-221)||(93779-93910)
scaffold0032 (137-220)||(104630-104713)
[»] scaffold0006 (1 HSPs)
scaffold0006 (96-219)||(197261-197384)
[»] scaffold0025 (3 HSPs)
scaffold0025 (90-220)||(53456-53586)
scaffold0025 (96-221)||(85649-85773)
scaffold0025 (142-222)||(148884-148963)
[»] scaffold1272 (1 HSPs)
scaffold1272 (137-214)||(451-528)
[»] scaffold0016 (1 HSPs)
scaffold0016 (93-221)||(116564-116688)
[»] scaffold0480 (1 HSPs)
scaffold0480 (90-221)||(8888-9019)
[»] scaffold0010 (1 HSPs)
scaffold0010 (110-221)||(31150-31261)
[»] scaffold0009 (1 HSPs)
scaffold0009 (90-221)||(69567-69698)
[»] scaffold0095 (1 HSPs)
scaffold0095 (90-220)||(33735-33865)
[»] scaffold0020 (1 HSPs)
scaffold0020 (91-212)||(108120-108241)
[»] scaffold0670 (1 HSPs)
scaffold0670 (90-212)||(7690-7812)
[»] scaffold0598 (1 HSPs)
scaffold0598 (90-212)||(3361-3483)
[»] scaffold0193 (1 HSPs)
scaffold0193 (96-214)||(4721-4839)
[»] scaffold0004 (2 HSPs)
scaffold0004 (90-212)||(27607-27729)
scaffold0004 (90-212)||(86467-86589)
[»] scaffold0165 (2 HSPs)
scaffold0165 (90-211)||(30074-30195)
scaffold0165 (132-211)||(22151-22230)
[»] scaffold0387 (1 HSPs)
scaffold0387 (90-214)||(975-1099)
[»] scaffold0554 (1 HSPs)
scaffold0554 (90-222)||(2025-2158)
[»] scaffold0021 (3 HSPs)
scaffold0021 (132-221)||(16051-16140)
scaffold0021 (132-221)||(11840-11929)
scaffold0021 (132-221)||(25582-25671)
[»] scaffold0409 (2 HSPs)
scaffold0409 (109-221)||(1354-1466)
scaffold0409 (109-221)||(9609-9721)
[»] scaffold0123 (1 HSPs)
scaffold0123 (137-221)||(8167-8251)
[»] scaffold0103 (1 HSPs)
scaffold0103 (117-221)||(33799-33903)
[»] scaffold0014 (2 HSPs)
scaffold0014 (90-221)||(159409-159541)
scaffold0014 (132-221)||(85484-85573)
[»] scaffold0342 (1 HSPs)
scaffold0342 (132-221)||(6094-6183)
[»] scaffold0153 (1 HSPs)
scaffold0153 (96-209)||(8606-8719)
[»] scaffold0077 (1 HSPs)
scaffold0077 (90-214)||(6654-6778)
[»] scaffold0406 (1 HSPs)
scaffold0406 (94-212)||(14150-14268)
[»] scaffold0148 (1 HSPs)
scaffold0148 (90-212)||(37668-37790)
[»] scaffold0133 (1 HSPs)
scaffold0133 (90-212)||(25456-25578)
[»] scaffold0065 (1 HSPs)
scaffold0065 (110-212)||(67912-68014)
[»] scaffold0338 (1 HSPs)
scaffold0338 (90-221)||(9097-9228)
[»] scaffold0120 (2 HSPs)
scaffold0120 (90-221)||(21622-21752)
scaffold0120 (117-214)||(31348-31444)
[»] scaffold0138 (1 HSPs)
scaffold0138 (140-203)||(22453-22516)
[»] scaffold0253 (2 HSPs)
scaffold0253 (110-220)||(7532-7642)
scaffold0253 (110-220)||(16957-17067)
[»] scaffold0035 (2 HSPs)
scaffold0035 (132-222)||(109467-109557)
scaffold0035 (117-222)||(117968-118073)
[»] scaffold1164 (1 HSPs)
scaffold1164 (93-221)||(1494-1622)
[»] scaffold0610 (1 HSPs)
scaffold0610 (117-221)||(582-686)
[»] scaffold0456 (2 HSPs)
scaffold0456 (137-221)||(1552-1636)
scaffold0456 (137-221)||(8697-8781)
[»] scaffold0011 (1 HSPs)
scaffold0011 (142-221)||(123186-123264)
[»] scaffold0389 (1 HSPs)
scaffold0389 (137-211)||(10819-10893)
[»] scaffold0037 (1 HSPs)
scaffold0037 (136-222)||(24733-24819)
[»] scaffold0447 (2 HSPs)
scaffold0447 (136-221)||(4720-4805)
scaffold0447 (136-221)||(9334-9419)
[»] scaffold0383 (1 HSPs)
scaffold0383 (136-221)||(7329-7414)
[»] scaffold0160 (1 HSPs)
scaffold0160 (117-178)||(158-219)
[»] scaffold0117 (1 HSPs)
scaffold0117 (136-221)||(11574-11659)
[»] scaffold0075 (2 HSPs)
scaffold0075 (117-222)||(5078-5183)
scaffold0075 (143-209)||(34494-34559)
[»] scaffold0601 (1 HSPs)
scaffold0601 (144-212)||(895-963)
[»] scaffold0190 (1 HSPs)
scaffold0190 (141-221)||(10098-10178)
[»] scaffold0012 (1 HSPs)
scaffold0012 (117-213)||(253003-253099)
[»] scaffold1542 (1 HSPs)
scaffold1542 (142-221)||(556-634)
[»] scaffold0420 (1 HSPs)
scaffold0420 (142-209)||(13347-13413)
[»] scaffold0413 (1 HSPs)
scaffold0413 (142-221)||(6086-6164)
[»] scaffold0266 (1 HSPs)
scaffold0266 (142-221)||(3604-3682)
[»] scaffold0215 (2 HSPs)
scaffold0215 (142-209)||(9371-9437)
scaffold0215 (142-209)||(16269-16335)
[»] scaffold0175 (1 HSPs)
scaffold0175 (142-221)||(978-1056)
[»] scaffold0023 (1 HSPs)
scaffold0023 (142-221)||(48761-48839)
[»] scaffold0634 (1 HSPs)
scaffold0634 (167-221)||(5599-5653)
[»] scaffold0132 (1 HSPs)
scaffold0132 (143-209)||(13670-13735)
[»] scaffold0125 (1 HSPs)
scaffold0125 (143-209)||(41812-41877)
[»] scaffold0359 (1 HSPs)
scaffold0359 (136-221)||(1473-1558)
[»] scaffold0008 (1 HSPs)
scaffold0008 (136-221)||(22847-22932)
[»] scaffold0561 (1 HSPs)
scaffold0561 (96-212)||(2787-2903)


Alignment Details
Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 15044938 - 15045069
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15044938 tagcataattcatcaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 15045037  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  15045038 tgcattcaaacataacatcataattggagcac 15045069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 15109486 - 15109356
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15109486 tagcataatttatcaatttgagtataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 15109387  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||||||||||||||||||||    
T  15109386 tgcattcaaacataacatcataattggagca 15109356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 41166083 - 41165951
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  41166083 tagcataattcaacaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcactaacaacaattcaattatcaacaacttca 41165984  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||| |||  |||||||||||||||||    
T  41165983 tgcattcaaatatattatcataattggagcaca 41165951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 47535202 - 47535071
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||    
T  47535202 tagcataattcatcaatttgagcatatttcaacatatatcactttctcatactttgaacttgaaatttcaccaacaacaattcaattatcaccaatttca 47535103  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  47535102 tgcattcaaacatatcatcataattagagcac 47535071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 52265643 - 52265514
Alignment:
Q  92 gcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatg 191  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||| | |||| |||||||||||||||||||||||||    
T  52265643 gcataattcaacaatttgagcatatttcaacatataccactttctcatactttgaacataaaatttctctaacaacaattcaattatcaacaacttcatg 52265544  T
Q  192 cattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||| ||||||    
T  52265543 cattcaaacataacatcataattagagcac 52265514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 13809647 - 13809516
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | | ||||||||| |||||||||||  | |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  13809647 tagcataattcaactaattgagcatatttcaacatataccattttctcatactttgaacatgaaatctcaccaacaacaattcaattaccaacaacttca 13809548  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||||||||||    
T  13809547 tgcattcaaacatatcatcataattggagcac 13809516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 7964848 - 7964718
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  |||||| ||||||| ||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  7964848 tagcacaattcaacatttagagcataattcaacatataacactttcacatactt-gaacatgcaatttcaccaacaacaattcaattatcaccaatttca 7964750  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    || ||||||||||| |||||||||| ||||||    
T  7964749 tgtattcaaacatatcatcataattagagcac 7964718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 18276544 - 18276675
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  |||||| ||| ||||||||||| ||||||||||||| ||||| |||||||| ||| ||||    
T  18276544 tagcacaattcaacatttagagcataattcaacatataacactttcacatgctttgaacatgcaatttcaccaacaacaatttaattatcaccaatttca 18276643  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| ||||||| || ||||||    
T  18276644 tgcattcaaacatatcatcatatttagagcac 18276675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 7185981 - 7185849
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| ||||||||| || | ||| |||||||||||||| | |||| |||||| |||||||  ||||||||||||| ||||||||||||||  || ||||    
T  7185981 tagcacaattcatcatttagtgcacaattcaacatatatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcactaatttca 7185882  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||| |||||||||| |||||||    
T  7185881 tgcattcaaacatatcatcataattagagcaca 7185849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 15013419 - 15013289
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||| | | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  15013419 tagcacaattcaacaatttgagcataattcacaatatgtcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcaatttca 15013320  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||| |||||| |||||||||| ||||||    
T  15013319 tgcattc-aacatatcatcataattagagcac 15013289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 41256506 - 41256376
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  41256506 tagcacaattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 41256407  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||| |||||  |||||||||| ||||||    
T  41256406 tgcattc-aacatttcatcataattagagcac 41256376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 14901345 - 14901472
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| || |||||||||| || ||||||||| ||||||||||||||  |||||||||||||||||||| ||| |||||| ||||||| ||||| |    
T  14901345 cataattcaacattttgagcatatttaaacatatatcactttctcatacttcaaacatgaaatttcaccaacaacaa-tcaattttcaacaatttcatac 14901443  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    |||||||||||   |||||||| ||||||    
T  14901444 attcaaacatattgtcataattagagcac 14901472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 27961084 - 27961212
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| | | || |||||| |||||||||||  ||||  ||||||||||||||||||||| ||| |||| ||||||||||||  | ||||||||||    
T  27961084 cataattcaaccaatttagcatatttcaacatataccacttcttcatactttgaacatgaaattccactaacaacaattcaattattcataacttcatgc 27961183  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    ||||||||||  |||||||||||||||||    
T  27961184 attcaaacatgtcatcataattggagcac 27961212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 38764821 - 38764932
Alignment:
Q  92 gcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatg 191  Q
    |||||||||| ||||||||||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||     
T  38764821 gcataattcaacaatttgagcacaattcacaatataacattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatt 38764920  T
Q  192 cattcaaacata 203  Q
    ||||||||||||    
T  38764921 cattcaaacata 38764932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 18238294 - 18238172
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| |||  |||    
T  18238294 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatatca 18238195  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || ||||||||||| ||||||||    
T  18238194 tgtattcaaacatatcatcataa 18238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 40905029 - 40904940
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||| | ||||||    
T  40905029 tttcacatactatgaacatgcaatttcaccaacaacaattcaattatcagcaatttcatgtattcaaacatatcatcataactagagcac 40904940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 13442807 - 13442691
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||||||||||  |||||  | |||| |||||| |||||||| |||||||| |||| |||||||||||||| ||| |||||| | |    
T  13442807 aattcaacatttagagcataattcacaatataacattttcacatactatgaacatgcaatttcacaaacaacaattcaattatcaccaatttcatgtact 13442708  T
Q  196 caaacataacatcataa 212  Q
    |||||||||||||||||    
T  13442707 caaacataacatcataa 13442691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 18494422 - 18494334
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||| | |||||||| ||| | |||||  |||||||||||||||||    
T  18494422 tttctcatactttgatcatgaagtttcaccaacaacaattcaattatc-ataacttcatacatacgaacatgtcatcataattggagcac 18494334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 12837337 - 12837206
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||  | |||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||||    
T  12837337 tagcataattcaccaatt-gagcatattttcaacatataccaatttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttc 12837239  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || |||  ||||||  |||||||||| ||||||    
T  12837238 atacatctaaacatgtcatcataattagagcac 12837206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 47468479 - 47468363
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||   ||||| | |||| |||||| |||||||  ||||||||||||| |||||||||||||| ||| |||||| | |    
T  47468479 aattcaacaattagagcacaattcacactatatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcatcaatttcatgtact 47468380  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  47468379 caaacatatcatcataa 47468363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 50220071 - 50219959
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||| ||||||| |||||| | |||| |||||| |||||||| ||||||||||||| ||||||||||||||  || |||||| | |    
T  50220071 aattcaacatttagagcacaattcaaaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgtact 50219972  T
Q  196 caaacataacatc 208  Q
    |||||||| ||||    
T  50219971 caaacatatcatc 50219959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 54398499 - 54398615
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||||| ||||  ||||| |||||||| ||||||| ||||| |||||||||||||| ||| |||||| | |    
T  54398499 aattcaacaattagagcacaattcacaatatattattttcatatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtact 54398598  T
Q  196 caaacataacatcataa 212  Q
    |||||||| || |||||    
T  54398599 caaacatatcaacataa 54398615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 30232591 - 30232503
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||| |||||||||| |||||| ||||||||||| ||||||||||||| | ||||||||  || |||||||  |||||||||||||||||    
T  30232591 tttcacatactttgatcatgaagtttcaccaacaacaattcaattatc-ataacttcatatatacaaacatgtcatcataattggagcac 30232503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 13590211 - 13590089
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||| | |||||||| | ||||| ||||||||||| |||||||| ||| ||||    
T  13590211 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatattatgaacatgcagtttcatcaacatcaattgaattatcaccaatttca 13590112  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || |  |||||||| ||||||||    
T  13590111 tgtacccaaacatatcatcataa 13590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 41916863 - 41916741
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| || |||  |||||| |  ||| |||||| |||||||| ||||||||||||| |||||  ||||||| ||| || |    
T  41916863 tagcacaattcaacaattagagcacaactcacaatatatcatcttcacatactatgaacatgcaatttcaccaacaacaattatattatcaccaatttta 41916764  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || ||||||||||| ||||||||    
T  41916763 tgtattcaaacatatcatcataa 41916741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 20813638 - 20813553
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  20813638 tcatactttgaacatgtaattcaaccaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcac 20813553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 16732279 - 16732410
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||  |  ||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||||    
T  16732279 tagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttc 16732377  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || |||  ||||||  ||||| |||| ||||||    
T  16732378 atacatctaaacatgtcatcacaattagagcac 16732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 30458060 - 30458144
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| ||||  ||||||| ||||| ||||||| | |||||||| |||  |||||| ||||||||||| ||||||    
T  30458060 catactttgaacatgtaattcaaccaacaacaatttaattatccataacttcatacatctaaacatgacatcataattagagcac 30458144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 54118344 - 54118266
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| |||||||||||    
T  54118344 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacaattggagcac 54118266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 40885659 - 40885594
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacata 203  Q
    ||||||||||||||| |||||||||||||   |||||||||||| ||| ||||||||| ||||||||    
T  40885659 catactttgaacatgtaatttcaccaacaaacattcaattatcaccaa-ttcatgcatacaaacata 40885594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 37957131 - 37957031
Alignment:
Q  121 acatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||| | ||||  ||||||||| |||  ||||||||||||| | | ||||||| || ||| ||| | ||| |||||||||||||||||| ||||||    
T  37957131 acatatatcattttcatatactttgatcattcaatttcaccaacaactaatcaattaccaccaatttcttacatacaaacataacatcataataggagca 37957032  T
Q  221 c 221  Q
    |    
T  37957031 c 37957031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 21417471 - 21417530
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacata 203  Q
    |||||||||||||||| || || |||||||||||||||||| ||||   |||||||||||    
T  21417471 tgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacata 21417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 10104349 - 10104272
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  10104349 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 10104272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 15675188 - 15675111
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  15675188 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 15675111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 122052 - 122131
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||| |||||||||||||    | ||||||||| ||| ||||||||| |||||||| ||||| | ||||||||||    
T  122052 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcaca 122131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 5450980 - 5450850
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5450980 tagcataattcatcaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 5450881  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||||||||||||||||||||    
T  5450880 tgcattcaaacataacatcataattggagca 5450850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 19862319 - 19862450
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19862319 tagcataattcaacaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 19862418  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  19862419 tgcattcaaacatatcatcataattagagcac 19862450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 28902301 - 28902432
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |    
T  28902301 tagcataattgatcaatttgagcataattcaacatatatcactttctcatactttgaacacgaagtttcaccaacaacaattcaattatcaacaacttta 28902400  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  28902401 tgcattcaaacataacatcataattggagcac 28902432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 28938696 - 28938827
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |    
T  28938696 tagcataattgatcaatttgagcataattcaacatatatcactttctcatactttgaacacgaagtttcaccaacaacaattcaattatcaacaacttta 28938795  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  28938796 tgcattcaaacataacatcataattggagcac 28938827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 432577 - 432702
Alignment:
Q  94 ataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgca 193  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  432577 ataattcatcaatttgagcataattcaacatatatcattttctcatactttgaacatgaagtttcaccaacaacaattcaattatcaacaactacatgca 432676  T
Q  194 ttcaaacataacatcataattggagc 219  Q
    |||||||||| |||||||||||||||    
T  432677 ttcaaacatatcatcataattggagc 432702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 16595621 - 16595748
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | | || ||||||||||||||||||||||||||    
T  16595621 cataattca-caatttgagcatatttcaacatataccactttctcatactttgaacatgaaatttctctatcaacaattcaattatcaacaacttcatgc 16595719  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||||||    
T  16595720 attcaaacataacatcataattggagcac 16595748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 7728530 - 7728658
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||    
T  7728530 tagcataattcaacaatttgagcatatttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaaatcaattatcaccaatttca 7728629  T
Q  190 tgcattcaaacataacatcataattggag 218  Q
    | |||||||| ||||| ||||||||||||    
T  7728630 tccattcaaatataacttcataattggag 7728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 3673972 - 3674103
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||| |    
T  3673972 tagcataattcaacaatttgagcatatttcaacatataccactttctcatactttgatcatgaaatttccctaacaacaattcaattatcaacaacttaa 3674071  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    || ||||||||||| |||||||||| ||||||    
T  3674072 tgtattcaaacatatcatcataatttgagcac 3674103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 21310846 - 21310715
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||| | |||||| ||||||||||||||||||| | |||| || |||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  21310846 tagcacaatttaacaattttagcataattcaacatatatcattttcacaaactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 21310747  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| ||||||| || ||||||    
T  21310746 tgcattcaaacatatcatcatagttagagcac 21310715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 21222726 - 21222614
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||||||||||||  ||||||  |||||||||||||| ||||||||||||| ||||| |||||||| ||| |||||||||||||||||| ||||    
T  21222726 gagcataattcaacatataacactttcatatactttgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcatc 21222627  T
Q  209 ataattggagcac 221  Q
    |||||| ||||||    
T  21222626 ataattagagcac 21222614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 21297312 - 21297191
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||   ||||||||||||||||| | |||| || |||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  21297312 tagcacaattcaacaattttgacataattcaacatatatcattttcacaaactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 21297213  T
Q  190 tgcattcaaacataacatcata 211  Q
    ||| |||||||||| |||||||    
T  21297212 tgcgttcaaacatatcatcata 21297191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 214
Target Start/End: Original strand, 22885766 - 22885876
Alignment:
Q  104 aatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacata 203  Q
    |||||||||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  22885766 aatttgagcacaattcacaatataacattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacata 22885865  T
Q  204 acatcataatt 214  Q
     ||||||||||    
T  22885866 tcatcataatt 22885876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 21617132 - 21617257
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||||| |||||||||||  ||||||  |||||| ||||||| |||||||| |||| |||| ||||||||| ||| ||||||||||    
T  21617132 aattcaacatttagagcatagttcaacatataacactttcatatacttggaacatgcaatttcactaacaacaatccaattatcaccaatttcatgcatt 21617231  T
Q  196 caaacataacatcataattggagcac 221  Q
    |||||||| |||||||||| ||||||    
T  21617232 caaacatatcatcataattagagcac 21617257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 29918081 - 29918206
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||||||||||  ||||||    ||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| |||    
T  29918081 aattcaacatttagagcataattcacaatatatcctgttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtatt 29918180  T
Q  196 caaacataacatcataattggagcac 221  Q
    |||||||| |||||||||||||||||    
T  29918181 caaacatatcatcataattggagcac 29918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 37983474 - 37983583
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||||||||||  |||||| |||||| ||||||||||| ||| ||||||||||||| |||||||||||||| ||| ||||    
T  37983474 tagcacaattcaacatttagagcataattcacaatatatcactttcacatactttgaatatgcaatttcaccaacaacaattcaattatcaccaatttca 37983573  T
Q  190 tgcattcaaa 199  Q
    ||||||||||    
T  37983574 tgcattcaaa 37983583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 23981606 - 23981522
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| || |||||||||| |||||||||||||| ||| ||||||||| |||||||| |||||||||| ||||||    
T  23981606 catactttgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatatcatcataattagagcac 23981522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 26559952 - 26559839
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  26559952 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 26559853  T
Q  190 tgcattcaaacata 203  Q
    || |||||||||||    
T  26559852 tgtattcaaacata 26559839  T

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Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 24084187 - 24084311
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||| ||||||| |||||||||||||| ||| ||||    
T  24084187 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgtaattttaccaacaacaattcaattatcaccaatttca 24084286  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || ||||||||||| || |||||||    
T  24084287 tgtattcaaacatatcaccataatt 24084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 6456740 - 6456862
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| |||||||||||   |||||||||||||  ||| |||||| |||    
T  6456740 aattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaa---caattcaattatcgccaatttcatgtatt 6456836  T
Q  196 caaacataacatcataattggagcac 221  Q
    ||||| || | |||||||| ||||||    
T  6456837 caaacgtatcttcataattagagcac 6456862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 32966254 - 32966155
Alignment:
Q  122 catatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| ||||  ||||||||| |||  ||||||||||||| ||| |||||||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  32966254 catatattattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttcttacattccaacataacatcataattggagcac 32966155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 21109866 - 21109979
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||| | ||| |||||| | |    
T  21109866 aattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattattaccaatttcatgtact 21109965  T
Q  196 caaacataacatca 209  Q
    |||||||| |||||    
T  21109966 caaacatatcatca 21109979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 1168339 - 1168211
Alignment:
Q  92 gcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcat 190  Q
    |||||||||| ||||| ||||||| || |||||||||| | |||||||||||||||||||| ||||  || |||| | |||| |||||| | ||||||||    
T  1168339 gcataattcaccaatt-gagcatattttcaacatatatcattttctcatactttgaacatgtaattcaactaacaaccattctattatccataacttcat 1168241  T
Q  191 gcattcaaacataacatcataattggagca 220  Q
     ||| |||||||  |||||||||| |||||    
T  1168240 acatccaaacatgtcatcataattagagca 1168211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 23494075 - 23494160
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| ||||| ||| || | |||||||||| || |||||||||||||||| |||||  ||||||| |||||||||    
T  23494075 tcatactttgaacataaaattccactaataacaattcaattttccacaacttcatgcattcgaacatgtcatcatagttggagcac 23494160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 11337280 - 11337192
Alignment:
Q  133 ttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||| ||||  || |||| ||||||||||||  | |||||||| ||| |||||||| |||||||||| ||||||    
T  11337280 ttctcatactttgaacatgtaattcaactaacaacaattcaattattcataacttcatacatccaaacatatcatcataattagagcac 11337192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 19405690 - 19405778
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||||||||||||||  || ||||  |||||||||||| | |||||||| |||||||| ||  |||||||||| |||||    
T  19405690 tttctcatactttgaacatgaaattcaactaacaataattcaattatccataacttcatacattcaaatatgtcatcataattagagca 19405778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 23234622 - 23234500
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| ||||||  |||| ||||| ||||||  |||||| | |||| |||||| | |||||| |||| |||||||| |||||||||||||| ||| ||||    
T  23234622 tagcacaattcaataattagagcacaattcacaatatatcattttcacatactataaacatgcaattacaccaacaacaattcaattatcaccaatttca 23234523  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | | ||||||| ||||||||    
T  23234522 tgtacttaaacatatcatcataa 23234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 23466589 - 23466637
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatca 180  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  23466589 tttctcatactttgatcatgaagtttcaccaacaacaattcaattatca 23466637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 21906855 - 21906909
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcat 190  Q
    |||||||||||||||| ||||  ||||||||||||||||||||| | ||||||||    
T  21906855 tcatactttgaacatgtaattcaaccaacatcaattcaattatccataacttcat 21906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 11763587 - 11763523
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||||||||| ||||||||| |||||||||| ||| |||||  | ||||||||| ||||    
T  11763587 tgaacatgaaatttcatcaacatcaactcaattatcatcaaattcatctactcaaacatatcatc 11763523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 19873934 - 19873993
Alignment:
Q  153 aatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    ||||||| ||||| |||||||||||||| ||| |||||| | ||||||||| ||||||||    
T  19873934 aatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 19873993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 23507128 - 23507206
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| || ||||||||    
T  23507128 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacaaatggagcac 23507206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 29188372 - 29188306
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  29188372 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 29188306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 18531166 - 18531089
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  18531166 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 18531089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 20712232 - 20712317
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  | ||||| ||||||| ||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  20712232 tcatactttgaacatgtaattcaatcaacaacaattcagttatccataacttcatacatctaaacatgtcatcataattagagcac 20712317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 24183219 - 24183138
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||| ||||  || |||| ||||||||||||| |  ||||||| ||| |||||||  |||||||||| ||||||    
T  24183219 actttgaacatgtaattcgactaacaacaattcaattatccatgacttcatacatccaaacatgtcatcataattagagcac 24183138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 2453 - 2322
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2453 tagcataattcatcaatttgagcataattcaacatatgtcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 2354  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  2353 tgcattcaaacataacatcataattggagcac 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 13377639 - 13377770
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13377639 tagcataattaatcaatttgagtataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 13377738  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  13377739 tgcattcaaacataacatcataattggagcac 13377770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 17224075 - 17223944
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||     
T  17224075 tagcataattcaacaatttgagtataattcaacatatatcactttctcatactttgaacatgaaatttcacaaacaacaattcaattatccacaacttcg 17223976  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  17223975 tgcattcaaacatatcatcataattagagcac 17223944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 16919669 - 16919778
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||| ||||||||||| ||||    
T  16919669 tagcataattcatcaatttgagcataattcaacatatatcactttctcatattttgaacatgaaatttcaccaataacaattcgattatcaacaatttca 16919768  T
Q  190 tgcattcaaa 199  Q
    ||||||||||    
T  16919769 tgcattcaaa 16919778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 49047808 - 49047679
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| | | ||||||||| |||||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49047808 cataattcaaccaattgagcatatttcaacatataccactctctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgc 49047709  T
Q  193 attcaaacataacatcataattggagcaca 222  Q
    ||||||||||  ||| ||||||||||||||    
T  49047708 attcaaacatgtcattataattggagcaca 49047679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 9838989 - 9839120
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  9838989 tagcacaattcaacatttagagcataattcaacatataacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 9839088  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  9839089 tgcattcaaacatatcatcataattagagcac 9839120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 48356760 - 48356886
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  48356760 aattcaacatttagagcataattcaacatataacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 48356859  T
Q  196 caaacataacatcataattggagcaca 222  Q
    |||||||| |||||||||| |||||||    
T  48356860 caaacatatcatcataattagagcaca 48356886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 16915046 - 16914934
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||    
T  16915046 gagcataattcaacatataacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatc 16914947  T
Q  209 ataattggagcac 221  Q
    |||||| ||||||    
T  16914946 ataattagagcac 16914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 9611438 - 9611549
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  9611438 agcataattcaacatataacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatca 9611537  T
Q  210 taattggagcac 221  Q
    ||||| ||||||    
T  9611538 taattagagcac 9611549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 34241319 - 34241220
Alignment:
Q  115 aattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  34241319 aattcaacatatattactttcacatacttttaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacataacatcataatt 34241220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 14272036 - 14271905
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||| | ||| ||||| ||||||| |||||||||||| | |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||    
T  14272036 tagcatgaatcaacaattggagcatagttcaacatatatcattttcacatactttgaacatgcaatttcaccaacaacaattgaattatcaacaatttca 14271937  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| || ||||||| ||||||    
T  14271936 tgcattcaaacatatcaccataattagagcac 14271905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 28722220 - 28722351
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  28722220 tagcacaattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 28722319  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||| | ||||||    
T  28722320 tgcattcaaacatatcatcataactagagcac 28722351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 13274927 - 13275018
Alignment:
Q  130 actttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  13274927 actttctcatactttgaacatgaaattttactaacaacaattcaattaccaacaacttcttgcattcaaacatatcatcataattggagcac 13275018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 14935476 - 14935601
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  14935476 aattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 14935575  T
Q  196 caaacataacatcataattggagcac 221  Q
    |||||||| || ||||| | ||||||    
T  14935576 caaacatatcaccataactagagcac 14935601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 15363069 - 15363194
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  15363069 aattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 15363168  T
Q  196 caaacataacatcataattggagcac 221  Q
    |||||||| || ||||| | ||||||    
T  15363169 caaacatatcaccataactagagcac 15363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 38424335 - 38424451
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| || ||| |||    
T  38424335 aattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaattttatgtatt 38424434  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  38424435 caaacatatcatcataa 38424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 4484837 - 4484958
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||||| | |||| |||||  |||||||| |||||| |||||| |||||||||||||| ||| ||||    
T  4484837 tagcacaattcaacaatttgagcataattcacaatatatcattttcacatacaatgaacatgcaatttctccaacaacaattcaattatcaccaatttca 4484936  T
Q  190 tgcattcaaacataacatcata 211  Q
    || ||||||||||| |||||||    
T  4484937 tgtattcaaacatatcatcata 4484958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 20583691 - 20583567
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||| |||||  ||||||||||||| ||| ||||    
T  20583691 tagcacaattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcatcaacaataattcaattatcaccaatttca 20583592  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || ||||||||||| | ||||||||    
T  20583591 tgtattcaaacatatcttcataatt 20583567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 15358913 - 15359031
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  15358913 aattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 15359012  T
Q  196 caaacataacatcataatt 214  Q
    |||||||| || |||||||    
T  15359013 caaacatatcaccataatt 15359031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 14940865 - 14940993
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| |||||||||||   ||||| ||||||||  || ||||    
T  14940865 tagcacaattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaa---caatttaattatcacaaatttca 14940961  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| || ||||||| ||||||    
T  14940962 tgcattcaaacatatcaccataattagagcac 14940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 31501283 - 31501407
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| |||||||||||| |||||  |||||| | |||| |||||| |||||||| ||||||||||| | |||||||||||||| ||| ||||    
T  31501283 tagcacaattcaacaatttgagcattattcacaatatatcattttcacatactatgaacatgcaatttcaccaataacaattcaattatcaccaatttca 31501382  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || ||| ||||||| | ||||||||    
T  31501383 tgtatttaaacatatcttcataatt 31501407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 15368464 - 15368586
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    ||||||| |||||||||||||||||  |||||| | |||| |||||| |||||||| |||||||||||   ||||| ||||||||  || ||||||||||    
T  15368464 aattcattaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaa---caatttaattatcacaaatttcatgcatt 15368560  T
Q  196 caaacataacatcataattggagcac 221  Q
    |||||||| || ||||||| ||||||    
T  15368561 caaacatatcaccataattagagcac 15368586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 8267865 - 8267743
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  8267865 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttca 8267766  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  8267765 tgtactcaaacatatcatcataa 8267743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 12248258 - 12248126
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | ||||||||| || ||||||||| || ||||||||||||| |||||||||||  || || | ||||||||||||| | ||||||    
T  12248258 tagcataattcaaccaattgagcatattttcaacatatactattttctcatactttaaacatgaaattcaactaataacaattcaattatccataacttc 12248159  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || ||| |||||||  |||||||||| ||||||    
T  12248158 atacatccaaacatgtcatcataattagagcac 12248126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 4446322 - 4446453
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||| ||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  4446322 tagcacaattcaacaattggagcacaatacataatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 4446421  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||  | |||||||| |||||||| | ||||||    
T  4446422 tgtgtgcaaacatatcatcataactagagcac 4446453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 13448964 - 13448842
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| |||||||||||||  ||||||||||||| ||| ||||    
T  13448964 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttca 13448865  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||||||| ||||    
T  13448864 tgtactcaaacataacatgataa 13448842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 28390422 - 28390544
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| ||||| |||||||| ||| ||||    
T  28390422 tagcacaattcaacatttagagcacaattcacaatataccattttcacatactatgaacatgcaatttcaccaacaacaatttaattatcaccaatttca 28390521  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||||||||||||    
T  28390522 tgtactcaaacataacatcataa 28390544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 9319667 - 9319578
Alignment:
Q  123 atatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||| || ||||||||||| ||||||||    
T  9319667 atatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcttgtattcaaacatatcatcataa 9319578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 26070374 - 26070270
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| |    
T  26070374 ttcaacatataccattttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataattag 26070275  T
Q  217 agcac 221  Q
    |||||    
T  26070274 agcac 26070270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 26094161 - 26094057
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| |    
T  26094161 ttcaacatataccattttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataattag 26094062  T
Q  217 agcac 221  Q
    |||||    
T  26094061 agcac 26094057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 33559790 - 33559878
Alignment:
Q  123 atatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcata 211  Q
    |||||| | ||||||||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| |||  |||||| |||||||    
T  33559790 atatatcattttctcatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattttaacatatcatcata 33559878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 12759097 - 12759229
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || ||||| |||   |||| ||| | |||||||||| ||||  ||||||| ||||||||||||| | ||||||    
T  12759097 tagcataattcaccaatt-gagcatattttcaacacatacccctttttcacattttgaacatgtaattcaaccaacaacaattcaattatccataacttc 12759195  T
Q  189 atgcattcaaacataacatcataattggagcaca 222  Q
    || |||  ||||||| ||||||||||||||||||    
T  12759196 atacatctaaacatatcatcataattggagcaca 12759229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 4438893 - 4439015
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||  |||||| |||||||| ||||||||||| | |||||||||||||| ||| ||||    
T  4438893 tagcacaattcaacaattggagcacaattcacaatatatcattttaacatactatgaacatgcaatttcaccaataacaattcaattatcaccaatttca 4438992  T
Q  190 tgcattcaaacataacatcataa 212  Q
    ||  | ||||||||  |||||||    
T  4438993 tgtgtgcaaacatattatcataa 4439015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 9723944 - 9723822
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||| | |||||||| | ||||| ||||||||||| |||||||| ||| ||||    
T  9723944 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatattatgaacatgcagtttcatcaacatcaattgaattatcaccaatttca 9723845  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || |  |||||||| ||||||||    
T  9723844 tgtacccaaacatatcatcataa 9723822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 17947729 - 17947607
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| |||| |  |||||| | |||| |||||| || ||||  | ||| ||||||| |||||||||||||| ||| ||||    
T  17947729 tagcacaattcaacaattagagcacaatttacaatatatcattttcacatactatgcacattcagtttaaccaacaacaattcaattatcaccaatttca 17947630  T
Q  190 tgcattcaaacataacatcataa 212  Q
    |||| ||||||||| ||||||||    
T  17947629 tgcactcaaacatatcatcataa 17947607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 16570100 - 16570019
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataat 213  Q
    |||||||||||||||||||||||||  || |||| ||| ||||||||| | |||||||| ||| |||||||  |||||||||    
T  16570100 tttctcatactttgaacatgaaattcaactaacaacaaatcaattatccataacttcatacatccaaacatgtcatcataat 16570019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 16595562 - 16595643
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataat 213  Q
    |||||||||||||||||||||||||  || |||| ||| ||||||||| | |||||||| ||| |||||||  |||||||||    
T  16595562 tttctcatactttgaacatgaaattcaactaacaacaaatcaattatccataacttcatacatccaaacatgtcatcataat 16595643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 12369931 - 12369845
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||||| ||||  ||||||| |||||||||||||   |||||||| |||  ||||||  |||||||||| |||||||    
T  12369931 tcatactttgaacatgtaattcaaccaacaacaattcaattatccgtaacttcatacatctaaacatgtcatcataattagagcaca 12369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 11287527 - 11287627
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||  |  ||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||||    
T  11287527 tagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttc 11287625  T
Q  189 at 190  Q
    ||    
T  11287626 at 11287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 13863020 - 13862935
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  13863020 tcatactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatttcatcataattagagcac 13862935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 8563430 - 8563362
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||||| ||||||| ||||| |||||||||||||| ||| |||||  | ||||||||| ||||||||    
T  8563430 tgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcatcataa 8563362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 45149748 - 45149816
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||||| ||||||| ||||| |||||||||||||| ||| |||||| | ||||||||| ||| ||||    
T  45149748 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcattataa 45149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 46474166 - 46474234
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||||| ||||||| ||||| |||||||||||||| ||| |||||| | || |||||| ||||||||    
T  46474166 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactctaacatatcatcataa 46474234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 16479050 - 16478985
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||||||||    
T  16479050 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 13321173 - 13321245
Alignment:
Q  137 catactttgaa-catgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||| |||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  13321173 catactttgaaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 13321245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 44865391 - 44865472
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  44865391 actttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatggcatcataattagagcac 44865472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 45452259 - 45452174
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| |||| |||||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  45452259 tcatactttgaacatgtaattcaactaacaacaatccaattatccataacttcatacatctaaacatgtcatcataattagagcac 45452174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 3895181 - 3895265
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  ||||| |||| |||||    
T  3895181 tcatactttgaacatgcaattcaactaacaacaattcaattatccataacttcatacatctaaacatttcatcagaattagagca 3895265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 68102 - 68233
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  68102 tagcataattcaacaatttgagcatatttcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 68201  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  68202 tgcattcaaacataacatcataattggagcac 68233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 22775342 - 22775211
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  22775342 tagcataattcataaatttgaacacaattcaacatatataactttctcatactttgaacatgaagtttcaccaacaacaattcaattaccaacaacttca 22775243  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  22775242 tgcattcaaacataacatcataattggagcac 22775211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 22780720 - 22780589
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  22780720 tagcataattcataaatttgaacacaattcaacatatataactttctcatactttgaacatgaagtttcaccaacaacaattcaattaccaacaacttca 22780621  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  22780620 tgcattcaaacataacatcataattggagcac 22780589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 43646003 - 43646134
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  43646003 tagcataattcaacaatttgagcataattcaacatatatcactttctcatactttaaacatgaaatttcaccaacaacaatccaattatcaacaacttca 43646102  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| || ||||||| ||||||    
T  43646103 tgcattcaaacatatcaacataattagagcac 43646134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 217
Target Start/End: Complemental strand, 31146318 - 31146191
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| | |||| |||||||||||||||||||||||    
T  31146318 tagcataattcaacaatttgagcatatttcaacatatatcactttctcatactttgaacataaaatttctctaacaacaattcaattatcaacaacttca 31146219  T
Q  190 tgcattcaaacataacatcataattgga 217  Q
    |||||||||||||| |||||||||||||    
T  31146218 tgcattcaaacataccatcataattgga 31146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 24884796 - 24884928
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||| |||  |||||| |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| | ||    
T  24884796 tagcacaattcaacatttagagcataactcacaatatatcactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaattcca 24884895  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||| ||||||| || |||||||    
T  24884896 tgcattcaaacatatcatcatagttagagcaca 24884928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 24571429 - 24571298
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | | ||||||||| |||||||||||| | |||||||||| |||||||||||||||| | |||| |||||||| |||| |||||||||    
T  24571429 tagcataattcaaccaattgagcatatttcaacatatatcattttctcataccttgaacatgaaatttctctaacaacaattcaagtatccacaacttca 24571330  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||| |  ||||| |||| ||||||    
T  24571329 tgcattcaaacgtgtcatcaaaattagagcac 24571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 9636855 - 9636977
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  9636855 tagcacaattcaacaattagagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 9636954  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || ||||||||||| ||||||||    
T  9636955 tgtattcaaacatatcatcataa 9636977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 25305556 - 25305631
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaaca 165  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  25305556 tagcataattcaacaatttgagcataattcaacacatatcactttctcatactttgaacatgaaatttcatcaaca 25305631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 722531 - 722632
Alignment:
Q  120 aacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagc 219  Q
    ||||||||| | ||||  ||||||||| |||  ||||||||||||| ||| |||||||||| ||| ||||| ||||||||||||| ||||||||||||||    
T  722531 aacatatatcattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttcatacattcaaacataatatcataattggagc 722630  T
Q  220 ac 221  Q
    ||    
T  722631 ac 722632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 23821705 - 23821645
Alignment:
Q  161 caacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  23821705 caacaacaattcaattatcaacaacttcctgcattcaaacataacatcataattagagcac 23821645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 23830784 - 23830724
Alignment:
Q  161 caacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  23830784 caacaacaattcaattatcaacaacttcctgcattcaaacataacatcataattagagcac 23830724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 24277877 - 24277993
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||| ||| |||  ||||| |||    
T  24277877 aattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattgtcaccaatatcatgtatt 24277976  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  24277977 caaacatatcatcataa 24277993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 22579998 - 22579868
Alignment:
Q  91 agcataattcatcaatttgagcataattcaacatatattacttt-ctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||| | | ||||||||| |||||||||||  | ||| ||||||| |||| ||| || ||||||||||| ||||||||||||| | |||||||    
T  22579998 agcataattcaaccaattgagcatatttcaacatataacatttttctcataccttgatcataaagtttcaccaacaacaattcaattatc-ataacttca 22579900  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    | ||| |||||||  |||||||||||||||||    
T  22579899 tacatacaaacatgtcatcataattggagcac 22579868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 19666638 - 19666768
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | ||||||||||||||||  |  ||  ||||   ||||||||||||||| || |||||||| | |||||||||||||| ||| ||||    
T  19666638 tagcataattcaaccatttgagcataattcataagttaacacttatacatactttgaacatgcaaattcaccaaaaacaattcaattatcaccaatttca 19666737  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||| ||| ||| || |||||    
T  19666738 tgcattcaaacatatcattatagttagagca 19666768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 19660032 - 19660121
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||| |||||| |||||||| |||||||||||||  ||||||||||||| ||| |||||| || | |||||| |||||||||| ||||||    
T  19660032 tttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtatacgaacatatcatcataattagagcac 19660121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 25602161 - 25602258
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    |||||||||||| | |||||||||||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  ||||||||||    
T  25602161 ttcaacatatatcaatttctcatactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataatt 25602258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 3353 - 3253
Alignment:
Q  121 acatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||| | ||||  ||||||||| |||  ||||||||||||| ||| |||||||||| ||| ||| | ||| |||||||||||||||||| ||||||    
T  3353 acatatatcattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcatcaatttcttacatacaaacataacatcataataggagca 3254  T
Q  221 c 221  Q
    |    
T  3253 c 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 16292896 - 16292816
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||| |||||| |||||||| ||||||||||||| || ||||||||||| ||| |||||| | ||||||||| ||||||||    
T  16292896 tttcgcatactatgaacatgcaatttcaccaacaacagttcaattatcaccaatttcatgtactcaaacatatcatcataa 16292816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 28974186 - 28974290
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  |  |||| |||||| |||||| | |||||||| |||||||||||  |||||||||| |    
T  28974186 ttcaacatataccattttctcatactttgaacatgtaattcaattaacaacaattctattatccataacttcatacattcaaacatgtcatcataattag 28974285  T
Q  217 agcac 221  Q
    |||||    
T  28974286 agcac 28974290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 19669199 - 19669116
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    ||||||| ||||||| ||||||||||||| ||| |||||||||| ||| ||||||||| |||||||| || |||| || |||||    
T  19669199 catacttagaacatgcaatttcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatcaccatagttagagca 19669116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 24087470 - 24087395
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagc 219  Q
    |||||||| ||||||||||||| |||||||||||||| ||| ||||||   ||||||||| |||||||||| ||||    
T  24087470 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtgctcaaacatatcatcataattagagc 24087395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 27261940 - 27262037
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    |||||||||||  | |||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||| || ||| |||||||  ||||||||||    
T  27261940 ttcaacatataccaatttctcatactttgaacatgtaattgaactaacaacaattcaattatccataactttatacatccaaacatgtcatcataatt 27262037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 24294641 - 24294529
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||  ||||||||| | ||||  ||||||||| |||  ||||||||||||| ||| |||||||||| ||| |||   ||| |||  ||||||||    
T  24294641 gagcataatataacatatatcattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcatcaatttctcacatacaattataacatc 24294542  T
Q  209 ataattggagcac 221  Q
    |||||||||||||    
T  24294541 ataattggagcac 24294529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 43643057 - 43642978
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| ||||||||||||    
T  43643057 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacaattggagcaca 43642978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 25305630 - 25305672
Alignment:
Q  179 caacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  25305630 caacaacttcatgcattcaaacatatcatcataattagagcac 25305672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 271330 - 271411
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| ||||||    
T  271330 actttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataattagagcac 271411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 4448220 - 4448139
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| ||||||    
T  4448220 actttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataattagagcac 4448139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 36890780 - 36890691
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  ||||| |||| ||||||    
T  36890780 tttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgccatcacaattagagcac 36890691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 25265489 - 25265424
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  25265489 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 25265424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 9e-57; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 21623278 - 21623409
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  21623278 tagcataattcaacaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcagcaacaacaattcaattatcaacaacttca 21623377  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||||||||||    
T  21623378 tgcattcaaacataccatcataattggagcac 21623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 18399048 - 18399179
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||    
T  18399048 tagcataattcaacaatttgagcatatttcaacatatactattttctcatactttgaacatgaaatttctctaacaacaattcaattatcaacaacttca 18399147  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  18399148 tgcattcaaacataacatcataattggagcac 18399179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 22361902 - 22361770
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  22361902 tagcataattcatcaatttgagcataattcaacttatgtcactttctcatactttgaacatgaaatttcagcaacaacaattcaattatcaacaatttca 22361803  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||| |||||||||| |||||||    
T  22361802 tgcattcaaacatatcatcataattagagcaca 22361770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 18381819 - 18381688
Alignment:
Q  91 agcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcat 190  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18381819 agcataattcaacaatttaagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaaccattcaattatcaacaacttcat 18381720  T
Q  191 gcattcaaacataacatcataattggagcaca 222  Q
    | ||||||| ||| |||||||||| |||||||    
T  18381719 gtattcaaaaatatcatcataattagagcaca 18381688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 21411186 - 21411055
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||    |||| | |||||||||||||||||||||    
T  21411186 tagcataattca-caatttgagcatatttcaacatataccactttctcatactttgaacatgaaatttatttaacaaccattcaattatcaacaacttca 21411088  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    |||||||| ||||||||||||||||||||||||    
T  21411087 tgcattcatacataacatcataattggagcaca 21411055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 25367368 - 25367242
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatc-aacaacttcatgcat 194  Q
    |||||| ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||| | |||| |||||| |||||| || |||||||| |||    
T  25367368 aattcaacaatttgagcatatttcaacataaaccactttctcatactttgaacatgaaatttctctaacaacaattccattatcaaaaaacttcatacat 25367269  T
Q  195 tcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||||    
T  25367268 tcaaacataacatcataattggagcac 25367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 25651347 - 25651460
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  25651347 tagcacaattcaacatttagagcataattcaacatataacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 25651446  T
Q  190 tgcattcaaacata 203  Q
    ||||||||||||||    
T  25651447 tgcattcaaacata 25651460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 18629726 - 18629614
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    ||||||||||||  |||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||    
T  18629726 gagcataattcacaatataccactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatc 18629627  T
Q  209 ataattggagcac 221  Q
    |||||| ||||||    
T  18629626 ataattagagcac 18629614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 17557134 - 17557024
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||| ||||||||| |||||    
T  17557134 agcataattcaacatataacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgca-tcaaacatatcatca 17557036  T
Q  210 taattggagcac 221  Q
    ||||| ||||||    
T  17557035 taattagagcac 17557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 28195228 - 28195101
Alignment:
Q  92 gcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatg 191  Q
    |||||||||| | | ||||||| | |||| ||||||  | ||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||     
T  28195228 gcataattcaactaattgagcacatttcatcatataccattttctcatactatgaacatgaaattttactaacaacaattcaattatcaacaacttcata 28195129  T
Q  192 cattcaaacataacatcataattggagc 219  Q
    |||||||||||| |||||||||||||||    
T  28195128 cattcaaacatatcatcataattggagc 28195101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 17083334 - 17083204
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| |||||||||||||| | |||| |||||| |||||||  ||||||||||||| |||||||||||||| ||| ||||    
T  17083334 tagcacaattcaacatttagagcacaattcaacatatatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaa-ttca 17083236  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  17083235 tgcattcaaacatatcatcataattagagcac 17083204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 22848125 - 22848249
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||| ||||||  |||||  | |||| |||||| |||||||||||||||||||||| |||||||||||||| ||| |||     
T  22848125 tagcacaattcaacaatttgagcacaattcacaatataacattttcacatactatgaacatgaaatttcaccaacaacaattcaattatcaccaatttct 22848224  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    |||||| ||||||| ||||||||||    
T  22848225 tgcatttaaacatatcatcataatt 22848249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 29605560 - 29605690
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || |||||||| ||||||  |||| | | |||| |||||| |||||||| ||||||||||||| ||||||||||||| || | ||||    
T  29605560 tagcacaattcaacattttgagcacaattcacaatatttcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatc-actaattca 29605658  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| || ||||||| ||||||    
T  29605659 tgcattcaaacatatcaccataattagagcac 29605690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 19854307 - 19854387
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| | ||||||||||||||||||    
T  19854307 tttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtactcaaacataacatcataa 19854387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 33538487 - 33538376
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    ||||||||||||  | |||| |||||| ||||||||||||||| ||||||||||||| |||||||||| ||| ||| |||||||||||||| ||| || |    
T  33538487 gagcataattcacaacatatcactttcacatactttgaacatgcaatttcaccaacaacaattcaatt-tcaccaatttcatgcattcaaatatatcacc 33538389  T
Q  209 ataattggagcac 221  Q
    ||| || ||||||    
T  33538388 atagttagagcac 33538376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 22462234 - 22462112
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||  |||||| |||| | |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  22462234 tagcacaattcaacaattagagcaaaattcacaatataccactttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttca 22462135  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  22462134 tgtactcaaacatatcatcataa 22462112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 34966977 - 34967099
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||| ||| | ||||||  ||||||   |||| |||||| |||||||| |||||||| |||| |||||||||||||| ||| ||||    
T  34966977 tagcataattcaacaattagagtacaattcacaatatatctttttcacatactatgaacatgcaatttcacgaacaacaattcaattatcaccaatttca 34967076  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  34967077 tgtactcaaacatatcatcataa 34967099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 19672396 - 19672528
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||| | |||||||| |||||||  |||| |||||||||||||| ||| ||||    
T  19672396 tagcacaattcaacatttggagcacaattcacaatatatcattttcacatattatgaacatgcaatttcattaacaacaattcaattatcaccaatttca 19672495  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    || | |||||||||||||||||||  |||||||    
T  19672496 tgtactcaaacataacatcataataagagcaca 19672528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 23222867 - 23222983
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||| | |||| |||| | |||||||| ||||||| ||||| |||||||||||||| ||| |||||| | |    
T  23222867 aattcaacaattagagcacaattcacaatatatcattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtact 23222966  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  23222967 caaacatatcatcataa 23222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 17013776 - 17013654
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| |||||  |||| ||||||  |||||| | |||| |||||| |||||| | ||||||||||||| |||||||||| ||| ||| ||||    
T  17013776 tagcacaattcaacaattaaagcacaattcacaatatatcattttcacatactatgaacaggcaatttcaccaacaacaattcaattttcaccaatttca 17013677  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  17013676 tgtactcaaacatatcatcataa 17013654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 23222032 - 23222148
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||||||||||  |||||  | |||| |||| | |||||||| ||||||| ||||| |||||||||||||| ||| |||||| | |    
T  23222032 aattcaacaattagagcataattcacaatataccattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtact 23222131  T
Q  196 caaacataacatcataa 212  Q
    | |||||| ||||||||    
T  23222132 ctaacatatcatcataa 23222148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 33324803 - 33324933
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||||| | ||||||||||||||  |  ||  ||||   || |||||||||||| || ||||| |||| |||||||||||||||||| ||||    
T  33324803 tagcataattcatccaattgagcataattcataagttagcacttatacacactttgaacatgcaaattcac-aacaacaattcaattatcaacaatttca 33324901  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||| |||||||| |||| || || ||||||    
T  33324902 tgcatacaaacatatcatcctagttagagcac 33324933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 16106672 - 16106758
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| |||||||    
T  16106672 tcatactttgaacatgtaattcaaccaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcaca 16106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 16887879 - 16887798
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||| || |||||||||| || ||||||||||| ||| ||||||||| ||||||||  |||||| || ||||||    
T  16887879 actttgaacatgcaaattcaccaacaacagttcaattatcatcaatttcatgcatacaaacatattatcatagttagagcac 16887798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 15740387 - 15740470
Alignment:
Q  138 atactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| |||  ||||||||||||| | | |||||||||| ||| ||| | ||| |||||||| |||||||||||||||||    
T  15740387 atactttgatcattcaatttcaccaacaaccaatcaattatcaccaatttcttacatacaaacatagcatcataattggagcac 15740470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 35136149 - 35136019
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||||| | ||||||||||||||  |  ||  ||||   || |||||||||||| || ||||| |||| |||||||||||||| ||| ||||    
T  35136149 tagcataattcatccaattgagcataattcacaagttagcacttatacacactttgaacatgcaaattcac-aacaacaattcaattatcatcaatttca 35136051  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||| |||||||| |||| || || ||||||    
T  35136050 tgcatacaaacatatcatcctagttagagcac 35136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 16086176 - 16086258
Alignment:
Q  139 tactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||| |||||||||| ||||||    
T  16086176 tactttgaacatgtaattcaacaaacaacaattcaattatccataacttcatacatctaaacatatcatcataattagagcac 16086258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 32352160 - 32352278
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| || || || || ||||||  |||||| | |||| |||||| |||||||  ||||||||||  | |||||||||||||| ||| ||||||     
T  32352160 cataattcaacatttagaacacaattcacaatatatcattttcacatactatgaacatacaatttcaccataaacaattcaattatcaccaatttcatgt 32352259  T
Q  193 attcaaacataacatcata 211  Q
    ||||||| ||| |||||||    
T  32352260 attcaaatataccatcata 32352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 31467680 - 31467611
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataat 213  Q
    |||||||| |||||||  |||| |||||||||||||| ||| |||||| | ||||||||| |||||||||    
T  31467680 tgaacatgcaatttcattaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataat 31467611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 31628405 - 31628478
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcat 190  Q
    |||||||||||  |  ||||||||||||||||||| ||||  || |||| ||||||||||||||| ||||||||    
T  31628405 ttcaacatataccaacttctcatactttgaacatgtaattcaactaacaacaattcaattatcaataacttcat 31628478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 21931368 - 21931432
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||| ||||||| ||||| |||||||||||||| ||| |||||  ||||||||||| ||||    
T  21931368 tgaacatgcaatttcatcaacaacaattcaattatcatcaatttcatatattcaaacatatcatc 21931432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 14626218 - 14626152
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  14626218 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 14626152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 23153610 - 23153688
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  23153610 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 23153688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 15079795 - 15079742
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcat 194  Q
    |||||||||||| |||||||| |||| |||||||||||||  |||||||||||||    
T  15079795 actttgaacatgcaatttcac-aacaacaattcaattatcctcaacttcatgcat 15079742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 18570435 - 18570521
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||||| ||||| || || | ||||||||||||| | ||| |||| |||  ||||||  |||||||||| |||||||    
T  18570435 tcatactttgaacatgtaatttaactaataacaattcaattatccataacatcatacatctaaacatgtcatcataattagagcaca 18570521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 18777302 - 18777380
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    |||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  ||||||||||    
T  18777302 tcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataatt 18777380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 29160440 - 29160350
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatca 180  Q
    ||||| |||||| ||||| ||||| || |||  |||||| | |||| |||||  |||||||| |||||||| |||| ||||||||||||||    
T  29160440 tagcacaattcaacaattagagcacaactcacaatatatcattttcacataccatgaacatgcaatttcactaacaacaattcaattatca 29160350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 32898946 - 32899031
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  32898946 tcatactttgaacatgtaattcaactaacaacaattcaattattcataacttcatacatctaaacatgtcatcataattagagcac 32899031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 30207326 - 30207457
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30207326 tagcacaattcatcaatttaagcataattcaacatatatcactttctcatactttgaacatgaagtttcaccaacaacaattcaattatcaacaacttca 30207425  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  30207426 tgcattcaaacataacatcataattggagcac 30207457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 3576575 - 3576451
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  3576575 tagcataatccatcaatttgagcataattcaatatatatcactttctcatacattgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 3576476  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    |||||||||||||| ||||||||||    
T  3576475 tgcattcaaacatatcatcataatt 3576451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 17191654 - 17191782
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  17191654 cataattcatcaatttgagcataattcaacataaatcactttctcatactttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgc 17191753  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    ||||||||||| |||||||||| ||||||    
T  17191754 attcaaacatatcatcataattagagcac 17191782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 12488860 - 12488733
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  12488860 cataattcatcaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcatcaacaacaattcaattatcaacaacttcatgc 12488761  T
Q  193 attcaaacataacatcataattggagca 220  Q
    || |||||| || ||||||||| |||||    
T  12488760 atccaaacacaatatcataattagagca 12488733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 14059350 - 14059219
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||||||| ||||||||| |||||||||| | | ||||||||||||||||||||||||||| | || | |||||||||||||||||||||||    
T  14059350 tagcataattcatcaaattgagcatatttcaacatatgtcattttctcatactttgaacatgaaatttctctaaaaacaattcaattatcaacaacttca 14059251  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  14059250 tgcattcaaacataacatcataattggagcac 14059219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 39656636 - 39656767
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||    
T  39656636 tagcataattcaacaatttgagcatatttcaacatatatcactttctcatactttgaacatgaaatttcactaacaacaattcaattatcaccaatttca 39656735  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |  |||||||||||||||||||||||||||||    
T  39656736 taaattcaaacataacatcataattggagcac 39656767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 47784883 - 47784772
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  47784883 agcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatca 47784784  T
Q  210 taattggagcac 221  Q
    ||||| ||||||    
T  47784783 taattagagcac 47784772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 17204811 - 17204922
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| |||||    
T  17204811 agcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcatca 17204910  T
Q  210 taattggagcac 221  Q
    ||||| ||||||    
T  17204911 taattagagcac 17204922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 17139618 - 17139749
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||| ||||| | | ||||||||| |||||||||||  | ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17139618 tagcatgattcaaccaattgagcatatttcaacatataccattttctcatagtttgaacatgaaatttcaccaacaacaattcaattaccaacaacttca 17139717  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||  |||||||||||||||||    
T  17139718 tgcattcaaacatgtcatcataattggagcac 17139749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 11329098 - 11328995
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| |    
T  11329098 tagcataattcaacaatttgagcatatttcaacatataccactttctcatactttgaacatgaaatttcactaacaacaattcaattattaacaacttta 11328999  T
Q  190 tgca 193  Q
    ||||    
T  11328998 tgca 11328995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 16880233 - 16880364
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||   ||| ||||||||| |  ||||||||  |||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||     
T  16880233 tagcataatttcacaaattgagcatattctaacatataccactttctcatactttgaacatgaaattttactaacaacaattcaattatcaacaacttct 16880332  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||| ||||||||||||    
T  16880333 tgcattcaaacatatcatcgtaattggagcac 16880364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 12953074 - 12953198
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  ||||||  |||||||||||||| ||||||||||||| ||||  |||||||| ||| ||||    
T  12953074 tagcacaattcaacatttagagcataattcaacatataacactttcatatactttgaacatgcaatttcaccaacaacaatctaattatcaccaatttca 12953173  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    |||||||||||||| ||||||||||    
T  12953174 tgcattcaaacatatcatcataatt 12953198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9590891 - 9590760
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||| ||||||||||||||    |||  |||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||| || |    
T  9590891 tagcataattcaacaaattgagcataattcatatcataccactttcacatactttgaacatgaagtttcaccaacaacaattcaattatcaccaatttaa 9590792  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| ||||||| || ||||||    
T  9590791 tgcattcaaacatatcatcatagttagagcac 9590760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 12560373 - 12560242
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | | ||| ||||| ||  |||||||  ||||||||||||||||||||||||||||| | ||||  ||||||| |||||| |||||||    
T  12560373 tagcataattcaaccagttgggcatattttcacatataccactttctcatactttgaacatgaaatttctctaacaaaaattcaagtatcaataacttca 12560274  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
     |||||||| ||||||||||||||||||||||    
T  12560273 agcattcaatcataacatcataattggagcac 12560242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 15876182 - 15876309
Alignment:
Q  94 ataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgca 193  Q
    ||||| || ||||||||| || |||||| |||||| |||||||||||||| |||||| |||||||| ||||| ||||||| ||||||||||| |||||||    
T  15876182 ataatccaacaatttgagtatcattcaagatatatcactttctcatacttggaacataaaatttcatcaacaacaattcagttatcaacaacatcatgca 15876281  T
Q  194 ttcaaacataacatcataattggagcac 221  Q
    || |||||||  ||||||||| ||||||    
T  15876282 tttaaacatattatcataattagagcac 15876309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 14814902 - 14814778
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  14814902 tagcacaattcaacaatttgagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 14814803  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || ||||||||||| || |||||||    
T  14814802 tgtattcaaacatatcaccataatt 14814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 34560028 - 34560133
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||||||||| ||  || ||| |||| |||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||     
T  34560028 gagcataattcaacatgtaacacattcacatattttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatt 34560127  T
Q  209 ataatt 214  Q
    ||||||    
T  34560128 ataatt 34560133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 14295548 - 14295680
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | ||||||||| || |||||||||  | |||||||||||||||||||||| ||  || |||| ||||||||||||| | ||||||    
T  14295548 tagcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacatgaatttcaactaacaacaattcaattatccataacttc 14295647  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || ||||||||||| ||||||||||| ||||||    
T  14295648 atacattcaaacatgacatcataattagagcac 14295680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 14301175 - 14301307
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | ||||||||| || |||||||||  | |||||||||||||||||||||| ||  || |||| ||||||||||||| | ||||||    
T  14301175 tagcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacatgaatttcaactaacaacaattcaattatccataacttc 14301274  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || ||||||||||| ||||||||||| ||||||    
T  14301275 atacattcaaacatgacatcataattagagcac 14301307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 55440958 - 55440854
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||| ||||||| | ||||||||||||||||||||||||| ||| |||| ||||||||||||| | |||||||| |||||||||||  |||||||||| |    
T  55440958 ttcatcatatatcattttctcatactttgaacatgaaattccactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataattag 55440859  T
Q  217 agcac 221  Q
    |||||    
T  55440858 agcac 55440854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 6228762 - 6228631
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  6228762 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttca 6228663  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    || ||||||||||| || ||||||| ||||||    
T  6228662 tgtattcaaacatatcaccataattagagcac 6228631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 31412464 - 31412348
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| |||||  |||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| |||    
T  31412464 aattcaacaattaaagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtatt 31412365  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  31412364 caaacatatcatcataa 31412348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 13301564 - 13301475
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||| |||||| |||||||| |||||||||||||  ||||||||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  13301564 tttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataattagagcac 13301475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 13312220 - 13312131
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||| |||||| |||||||| |||||||||||||  ||||||||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  13312220 tttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataattagagcac 13312131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 4162336 - 4162214
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||| ||||||  |||||| | |||| |||||| ||||| || ||||||||||||| |||||||||||||| ||| || ||| |||    
T  4162336 aattcaacatttagagcacaattcacaatatatcattttcacatactatgaacttgtaatttcaccaacagcaattcaattatcaccaattttatgtatt 4162237  T
Q  196 caaacataacatcataattggag 218  Q
    |||||||| || |||||||||||    
T  4162236 caaacatatcaccataattggag 4162214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 15517795 - 15517872
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||| ||||||||||||| |||||||||||||| ||| |||||| | ||||||||| |||||||||| ||||||    
T  15517795 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataattagagcac 15517872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 41661675 - 41661796
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||  | ||    
T  41661675 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcatttcca 41661774  T
Q  190 tgcattcaaacataacatcata 211  Q
    || ||||||||||| |||||||    
T  41661775 tgtattcaaacatatcatcata 41661796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 4145950 - 4145823
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| | ||||  |||||| | |||| |||||| |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  4145950 tagcacaattcaacatttagagcacagttcacaatatatcattttcacatactatgaacatgtaatttcatcaacaacaattcaattatcaccaa-ttca 4145852  T
Q  190 tgcattcaaacataacatcataattggag 218  Q
    || ||||||||||| || |||||||||||    
T  4145851 tgtattcaaacatatcaccataattggag 4145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 11882313 - 11882225
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||| |||||| |||||||  |||||||||||||  ||||||||||||| ||| |||||| ||||||||||| |||||||||| |||||    
T  11882313 tttcacatactatgaacattcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataattagagca 11882225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 14080666 - 14080750
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| || ||||| |||  |||||||||||||| ||| ||||||||| |||||||| ||||||| |||||||||    
T  14080666 catactttgaacatgcaaattcactaaccacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttggagcac 14080750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 54424122 - 54424253
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||| | |||||||||||||||||||| ||||  || |||  ||||||||||||| | ||||||    
T  54424122 tagcataattcaccaatt-gagcatattttcaacatatatcaatttctcatactttgaacatgtaattcaactaaccacaattcaattatccataacttc 54424220  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || |||  ||||||  |||||||||| ||||||    
T  54424221 atacatctaaacatggcatcataattagagcac 54424253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 33369022 - 33368951
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacata 203  Q
    |||| |||||| |||||||| ||||||||||||  |||||||||||||| ||| ||||||||||||||||||    
T  33369022 tttcacatactatgaacatgcaatttcaccaaccacaattcaattatcaccaatttcatgcattcaaacata 33368951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 50313316 - 50313419
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| ||||||||||||||  || |||||||| ||||||||| |||     
T  50313316 gagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgcactcaaacatatcatt 50313415  T
Q  209 ataa 212  Q
    ||||    
T  50313416 ataa 50313419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 3578226 - 3578307
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaa 198  Q
    ||||||||||| || |||||||||||||||||||||||||  || || | ||||||||||||| | |||||||| |||||||    
T  3578226 ttcaacatatactattttctcatactttgaacatgaaattcaactaataacaattcaattatccataacttcatacattcaa 3578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 8631927 - 8632032
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  |  |||||| |||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| |    
T  8631927 ttcaacatataccaacttctcaaactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataattag 8632026  T
Q  217 agcaca 222  Q
    ||||||    
T  8632027 agcaca 8632032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 19260930 - 19260845
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||| |||||||||| ||||||    
T  19260930 tcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatatcatcataattagagcac 19260845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 43427653 - 43427552
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| |||| |  |||||| | |||| |||||| |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  43427653 tagcacaattcaacaattagagcacaatttacaatatatcattttcacatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttca 43427554  T
Q  190 tg 191  Q
    ||    
T  43427553 tg 43427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 8604977 - 8605057
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||| |||||| |||||||| ||||||| ||||| |||||||||||| | ||| |||||| | ||||||||| ||||||||    
T  8604977 tttcacatactatgaacatgcaatttcatcaacaacaattcaattattaccaatttcatgtactcaaacatatcatcataa 8605057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 10913053 - 10913118
Alignment:
Q  147 acatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    ||||| ||||||| ||||| |||||||||||||| ||| |||||| | ||||||||| ||||||||    
T  10913053 acatgcaatttcatcaacaacaattcaattatcaccaaattcatgtactcaaacatatcatcataa 10913118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 17100809 - 17100894
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  17100809 tcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcac 17100894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 17101494 - 17101579
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  17101494 tcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcac 17101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 11196384 - 11196324
Alignment:
Q  162 aacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||| ||||||||||||| | |||||||| |||||||||||| |||||| ||| |||||||    
T  11196384 aacaacaattcaattatccataacttcatacattcaaacatatcatcattattagagcaca 11196324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 17523026 - 17522895
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||  | ||| | |||||||||||||| ||||  || |||| ||||||||||||| ||| ||||    
T  17523026 tagcataattcaccaatt-gagcatattttcaacatataccattttgttatactttgaacatgtaattcaactaacaacaattcaattatccacatcttc 17522928  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || ||| ||||  |  |||||||||| ||||||    
T  17522927 atacatccaaaactgtcatcataattagagcac 17522895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 38375779 - 38375711
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||||| ||||||| | ||| |||||||||||||| ||| |||||| | ||||||||| ||||||||    
T  38375779 tgaacatgcaatttcatctacaacaattcaattatcatcaaattcatgtactcaaacatatcatcataa 38375711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 50112142 - 50112058
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| |||||    
T  50112142 tcatactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatggcatcataattagagca 50112058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11402754 - 11402813
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacata 203  Q
    |||||||||||||||| ||||| |||||||||||||| ||| |||||  | |||||||||    
T  11402754 tgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacata 11402813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 11638467 - 11638554
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaatta 177  Q
    ||||| |||||| |||||  |||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| |||||||||||    
T  11638467 tagcacaattcaacaattaaagcacaattcacaatataccattttcacatactatgaacatgcaatttcaccaacaacaattcaatta 11638554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 15859124 - 15859046
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  15859124 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 15859046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 51158118 - 51158040
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  51158118 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 51158040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 11061143 - 11061037
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | ||||||||| || |||||||||  | ||||||||||||||||| |||||||  || |||| |||| |||||||  | ||||||    
T  11061143 tagcataattcaaccaattgagcatattttcaacatataccattttctcatactttgaacctgaaattcaactaacaacaatccaattattcataacttc 11061044  T
Q  189 atgcatt 195  Q
    || ||||    
T  11061043 atacatt 11061037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 14298581 - 14298663
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||| ||||  || |||  ||||||||||||| | |||||||| ||| |||||||  |||||||||| |||||||    
T  14298581 actttgaacatgtaattcaactaaccacaattcaattatccataacttcatacatccaaacatgtcatcataattagagcaca 14298663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 14304208 - 14304290
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||| ||||  || |||  ||||||||||||| | |||||||| ||| |||||||  |||||||||| |||||||    
T  14304208 actttgaacatgtaattcaactaaccacaattcaattatccataacttcatacatccaaacatgtcatcataattagagcaca 14304290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 16646022 - 16646153
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  16646022 tagcataattaatcaatttgagaataattcaacatatatcactttctcatactttgaacatgaaattttaccaacatcaattaaattatcaacaacttca 16646121  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  16646122 tgcattcaaacataacatcataattggagcac 16646153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 16656748 - 16656879
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |    
T  16656748 tagcataattgatcaatttgagcataattcaacatatatcactttctcatactttgaacacgaagtttcaccaacaacaattcaattatcaacaacttta 16656847  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||||||||||||||||||||    
T  16656848 tgcattcaaacataacatcataattggagcac 16656879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 20177285 - 20177416
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  20177285 tagcataattcaacaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcg 20177384  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||| ||||||| |||||||||||||||||    
T  20177385 tgcattaaaacatatcatcataattggagcac 20177416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 37233997 - 37233875
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| || || |||||||||||||||||||| ||||||  |||||||||||||| ||||| ||||||| |||||||||||||| ||| ||||    
T  37233997 tagcataattcaacatttagagcataattcaacatatatcactttcatatactttgaacatgcaattttaccaacaacaattcaattatcaccaatttca 37233898  T
Q  190 tgcattcaaacataacatcataa 212  Q
    |||||||||||||| ||||||||    
T  37233897 tgcattcaaacatatcatcataa 37233875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 13376974 - 13376865
Alignment:
Q  112 cataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcata 211  Q
    ||||||||||||||||  ||||  |||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  13376974 cataattcaacatataccacttcttcatactttgaacatgaaatttcaacgacaacaatttaattatcaacaacttcatgcattcaaacatatcatcata 13376875  T
Q  212 attggagcac 221  Q
    ||| ||||||    
T  13376874 attagagcac 13376865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 51627798 - 51627669
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| | | |||| |||| |||||||||||  | |||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||||||    
T  51627798 cataattcaaccaattgaacatatttcaacatataccattttctcatactttgaacatgaagtttcactaacaacaattcaatcatcaacaaattcatgc 51627699  T
Q  193 attcaaacataacatcataattggagcaca 222  Q
    |||||| |||| ||||||||||||||||||    
T  51627698 attcaagcatatcatcataattggagcaca 51627669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 17609038 - 17609169
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  ||||||  |||||||||||||| ||||||||||||| |||| ||||||||| ||| ||||    
T  17609038 tagcacaattcaacatttagagcataattcaacatataacactttcatatactttgaacatgcaatttcaccaacaacaatccaattatcaccaatttca 17609137  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| ||| |||||||||| ||||||    
T  17609138 tgcattcaaatatatcatcataattagagcac 17609169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 21195124 - 21195255
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||||||||  |||||| | |||| |||||| |||||||  ||||||||||||| |||||||||||||| ||| ||||    
T  21195124 tagcacaattcaacaatttgagcataattcacaatatatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaatttca 21195223  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| || ||||||| ||||||    
T  21195224 tgcattcaaacatatcaccataattagagcac 21195255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 19603238 - 19603338
Alignment:
Q  121 acatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||| | ||||  ||||||||| |||  ||||||||||||| ||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  19603238 acatatatcattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttcatacattcaaacataacatcataattggagca 19603337  T
Q  221 c 221  Q
    |    
T  19603338 c 19603338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 8538039 - 8537924
Alignment:
Q  98 ttcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattca 197  Q
    |||| |||||| |||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| ||||||||||||||  || ||||||||||||    
T  8538039 ttcaacaatttaagcacaattcacaatataacattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgcattca 8537940  T
Q  198 aacataacatcataat 213  Q
    |||||| |||||||||    
T  8537939 aacatatcatcataat 8537924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 8603278 - 8603163
Alignment:
Q  98 ttcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattca 197  Q
    |||| |||||| |||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| ||||||||||||||  || ||||||||||||    
T  8603278 ttcaacaatttaagcacaattcacaatataacattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgcattca 8603179  T
Q  198 aacataacatcataat 213  Q
    |||||| |||||||||    
T  8603178 aacatatcatcataat 8603163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 5768300 - 5768184
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||  ||||||||||||| |||||||||||||| ||| |||||| | |    
T  5768300 aattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaatttcatgtact 5768201  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  5768200 caaacatatcatcataa 5768184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 20955528 - 20955444
Alignment:
Q  138 atactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    ||||||||| |||  ||||||||||||| ||  |||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  20955528 atactttgatcattcaatttcaccaacaacagatcaattatcaccaatttcatacattcaaacataacatcataattggagcaca 20955444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 38033792 - 38033680
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||  ||||||||| | ||||  ||||||||| |||  ||||||||||||| |||||||||||||| ||| ||| | ||| |||||||||||||    
T  38033792 gagcataatataacatatatcattttcatatactttgatcattcaatttcaccaacaacaattcaattatcatcaatttcttacatacaaacataacatc 38033693  T
Q  209 ataattggagcac 221  Q
    ||||| |||||||    
T  38033692 ataataggagcac 38033680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 52400761 - 52400872
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||| ||||| ||| |||||| ||||||||||| || ||    
T  52400761 agcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaactatcaccaatttcatgtattcaaacatatcacca 52400860  T
Q  210 taattggagcac 221  Q
    ||||| ||||||    
T  52400861 taattagagcac 52400872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 40436406 - 40436284
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||| | |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  40436406 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttca 40436307  T
Q  190 tgcattcaaacataacatcataa 212  Q
    |  ||||||||||| ||||||||    
T  40436306 tatattcaaacatatcatcataa 40436284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 27674954 - 27675037
Alignment:
Q  138 atactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| |||  ||||||||||| | ||| |||||||||| ||| ||| | ||||||||||||||||||||||||||||||    
T  27674954 atactttgatcattcaatttcaccaataacaaatcaattatcaccaatttcttacattcaaacataacatcataattggagcac 27675037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 27329850 - 27329762
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||| |||||||||| |||||| ||||||||||| ||||||||||||| | ||||||||  || |||||||  |||||||||||||||||    
T  27329850 tttcacatactttgatcatgaagtttcaccaacaacaattcaattatc-ataacttcatatatacaaacatgtcatcataattggagcac 27329762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 49997385 - 49997296
Alignment:
Q  123 atatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||  ||||||||||| || |||||    
T  49997385 atatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatatattcaaacatatcaccataa 49997296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 22143451 - 22143367
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| || |||||||||| ||||||||||||||  || ||||||||| |||||| | ||||||| || ||||||    
T  22143451 catactttgaacatgcaaattcaccaacaacaattcaattatcacaaatttcatgcatacaaacacatcatcatagttagagcac 22143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 22829499 - 22829431
Alignment:
Q  153 aatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||| |||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||    
T  22829499 aatttcactaacaacaaatcaattatcaccagtttcatacattcaaacataacatcataattggagcac 22829431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 25093975 - 25094091
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| || || ||||||  |||||| | ||||||||| | || ||||| ||||||| ||||| |||||||||||||| ||| |||||| | |    
T  25093975 aattcaacaattagaacacaattcacaatatatcattttctcatattatggacatgcaatttcatcaacaacaattcaattatcaccaaattcatgtact 25094074  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  25094075 caaacatatcatcataa 25094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 21718380 - 21718469
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  21718380 tttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcac 21718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 36356367 - 36356299
Alignment:
Q  153 aatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||| || ||||||||||| ||| ||| | ||| |||||||||||||||||| |||||||    
T  36356367 aatttcaccaacaacatttcaattatcatcaatttcttacatacaaacataacatcataataggagcac 36356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 9784174 - 9784071
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  |  ||||||||||||||||||| ||||  | ||||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| |    
T  9784174 ttcaacatataccaacttctcatactttgaacatgtaattcaatcaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattag 9784075  T
Q  217 agca 220  Q
    ||||    
T  9784074 agca 9784071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 20445843 - 20445920
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| |||||||||||    
T  20445843 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacaattggagcac 20445920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 37844549 - 37844473
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||||| ||||||||    
T  37844549 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcatagttggagca 37844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 2116418 - 2116484
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  2116418 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 2116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 35054912 - 35054997
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  35054912 tcatactttgaacatgtaattcaactaacaacaattcaattattcataacttcatacatctaaacatgtcatcataattagagcac 35054997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 6771 - 6895
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6771 tagcataattcaacaatttgagcaaaattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttca 6870  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    |||||||||||||| ||||||||||    
T  6871 tgcattcaaacatatcatcataatt 6895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 21198286 - 21198158
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  21198286 cataattcaacaatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatctacaacttcatgc 21198187  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    ||||||||||| |||||||||| ||||||    
T  21198186 attcaaacatatcatcataattagagcac 21198158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 17285327 - 17285445
Alignment:
Q  103 caatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacat 202  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  17285327 caatttgagcataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacat 17285426  T
Q  203 aacatcataattggagcac 221  Q
    | |||||||||||||||||    
T  17285427 atcatcataattggagcac 17285445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 22981383 - 22981515
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||    
T  22981383 tagcataattcaacaatttgagcatatttcaacatataccactttctcatactttgaacatgaaatttctctaacaacaattcaattatcaacaacttca 22981482  T
Q  190 tgcattcaaacataacatcataattggagcaca 222  Q
    ||||||||||||||||||||||||| |||||||    
T  22981483 tgcattcaaacataacatcataattagagcaca 22981515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 23837308 - 23837439
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  23837308 tagcataattcaacaatttgagcatagttcaacatatatcactttctcatactttgaacatgaaatttcaataacaacaattcaattatcaacaacttca 23837407  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||| ||||||| |||||||||| ||||||    
T  23837408 tgcatttaaacatatcatcataattagagcac 23837439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 38533759 - 38533887
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||||||||  |||||||||||| |||||||||||  | ||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||    
T  38533759 tagcataattcaataatttgagcatatttcaacatataccattttctcatactttgaacatgagatttctctaacaacaattcaattatcaacaacttca 38533858  T
Q  190 tgcattcaaacataacatcataattggag 218  Q
    |||||||||||||||||||||||||||||    
T  38533859 tgcattcaaacataacatcataattggag 38533887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 26011604 - 26011735
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  26011604 tagcacaattcaacatttagagcataattcaacatataacactttcacatactttgaacatgtaatttcaccaacaacaattcaattatcaccaatttca 26011703  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  26011704 tgcattcaaacatatcatcataattagagcac 26011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 15933414 - 15933540
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || |||||||||||||||| ||  |||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  15933414 aattcaacatttagagcataattcaacatttaacactttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 15933513  T
Q  196 caaacataacatcataattggagcaca 222  Q
    |||||||| |||||||||| |||||||    
T  15933514 caaacatatcatcataattagagcaca 15933540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 25296274 - 25296389
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| |||||||||||||||||||||||||| | |||| ||  ||||||||||| ||||||||||||| ||||||||||||||  || ||||||||||    
T  25296274 aattcaacaatttgagcataattcaacatatatcattttcacaagctttgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcatt 25296373  T
Q  196 caaacataacatcata 211  Q
    |||||||| |||||||    
T  25296374 caaacatatcatcata 25296389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 5854743 - 5854855
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||||||||||||||||  ||||||  ||||||||||||||  |||||||||||| |||||||||||||  ||| |||||||||||||||||| ||||    
T  5854743 gagcataattcaacatataacactttcatatactttgaacatgctatttcaccaacaacaattcaattatcgccaatttcatgcattcaaacatatcatc 5854842  T
Q  209 ataattggagcac 221  Q
    |||||| ||||||    
T  5854843 ataattagagcac 5854855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 22735971 - 22735844
Alignment:
Q  94 ataattcatcaatttgagcataattcaacatatattactttctc-atactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||||||||||| ||||||||||||||||| | ||| |  |||||||||||||||| ||| ||||||| ||| |||||||||||| |||||||||    
T  22735971 ataattcatcaatttgatcataattcaacatatatcattttttttatactttgaacatgaagttttaccaacaacaactcaattatcaaccacttcatgc 22735872  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    |||| ||||||  ||||||||||||||||    
T  22735871 attc-aacatattatcataattggagcac 22735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 25758294 - 25758409
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| |||||||||||||||||||||||||| | ||||  |  ||||||||||| ||||||||||||| ||||||||||||||  || ||||||||||    
T  25758294 aattcaacaatttgagcataattcaacatatatcattttcaaaagctttgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcatt 25758393  T
Q  196 caaacataacatcata 211  Q
    |||||||| |||||||    
T  25758394 caaacatatcatcata 25758409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 39446903 - 39446773
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | | || |||||| |||||||||||  ||||  ||||||||| ||||||||||| ||| |||| ||||||||||||| |||||||||    
T  39446903 tagcataattcaaccaatttagcatatttcaacatataacacttcttcatactttaaacatgaaattccactaacaacaattcaattatccacaacttca 39446804  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
     ||||||||||||  ||||||||||||||||    
T  39446803 agcattcaaacatgtcatcataattggagca 39446773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 29306527 - 29306658
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| |||||||||||||||||||||||||| | |||| || |||||||||||  || |||||||||| ||||||||||||||  || ||||    
T  29306527 tagcacaattcaacaatttgagcataattcaacatatatcattttcacaaactttgaacatacaaattcaccaacaacaattcaattatcactaatttca 29306626  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||||  |||||| ||||||| || ||||||    
T  29306627 tgcattagaacatatcatcatagttagagcac 29306658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 33172338 - 33172460
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  33172338 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 33172437  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || ||||||||||| ||||||||    
T  33172438 tgtattcaaacatatcatcataa 33172460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 33528535 - 33528666
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| |||||||||||||| | ||||  |||||  ||| ||  ||||||| ||||| |||||||||||||||||| ||||    
T  33528535 tagcacaattcaacatttagagcacaattcaacatatatcattttcatatactaagaagatacaatttcatcaacaacaattcaattatcaacaatttca 33528634  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  33528635 tgcattcaaacatatcatcataattagagcac 33528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 23149888 - 23150020
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaa-catgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | ||||||||||||||    |||  |||||| |||| |||||| |||||||||||||||||| ||||||| ||||||  |  |||    
T  23149888 tagcataattcaaccaattgagcataattcataccataccactttcacatattttgaatcatgaaatttcaccaacaacaattcatttatcactagtttc 23149987  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| |||||||||||||||||    
T  23149988 atgcattcaaacatatcatcataattggagcac 23150020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 24552701 - 24552585
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| | |    
T  24552701 aattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtact 24552602  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  24552601 caaacatatcatcataa 24552585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 45465244 - 45465132
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    ||||||||||||  |||||  | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||| | ||||||||||||||    
T  45465244 gagcataattcacaatataacattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacataacatc 45465145  T
Q  209 ataattggagcac 221  Q
    ||||  |||||||    
T  45465144 ataacaggagcac 45465132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 18261608 - 18261477
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||| ||| ||||||||||||| |||||||||||||| ||| ||||    
T  18261608 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatactatgaagatgcaatttcaccaacaacaattcaattatcaccaatttca 18261509  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    || | ||||||||| |||||||| | ||||||    
T  18261508 tgtactcaaacatatcatcataactagagcac 18261477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 22742874 - 22742997
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  22742874 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 22742973  T
Q  190 tgcattcaaacataacatcataat 213  Q
    |||| ||||||||| || ||||||    
T  22742974 tgcactcaaacatatcaccataat 22742997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 45559074 - 45558952
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| ||||||||||||||  || ||||    
T  45559074 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttca 45558975  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  45558974 tgtactcaaacatatcatcataa 45558952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 38635779 - 38635654
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||||||| ||||||||  |||||| | |||| |||| | |||||||| ||||||||||||| ||||||||||||||  || |||||| |||    
T  38635779 aattcaacaatttgagtataattcacaatatatcattttcgcatattatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgtatt 38635680  T
Q  196 caaacataacatcataattggagcac 221  Q
    |||||||| ||| |||| | ||||||    
T  38635679 caaacatatcatgataactagagcac 38635654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 33611170 - 33611058
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||   |||||| |||||| ||||||||||||||||| ||||||||||| ||||  ||| |||| ||| |||||||||||||| ||| |||||    
T  33611170 agcataattctcaatatatcactttcacatactttgaacatgaattttcaccaacaacaatctaatgatcaccaatttcatgcattcaaatatatcatca 33611071  T
Q  210 taattggagcaca 222  Q
    || || |||||||    
T  33611070 tagttagagcaca 33611058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 19331451 - 19331341
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| || ||| ||||||||||||||||||  |||||| | |||| |||||| |||||||| |||||||||||   |||||||||||||| ||| ||||    
T  19331451 tagcacaactcaacaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaa---caattcaattatcaccaatttca 19331355  T
Q  190 tgcattcaaacata 203  Q
    || |||||||||||    
T  19331354 tgtattcaaacata 19331341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 23151918 - 23151843
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgga 217  Q
    |||||||||||||||||||||||| ||||||||||||||  |  |||||||||||||| ||| |||||||||||||    
T  23151918 tttgaacatgaaatttcaccaacaacaattcaattatcactagtttcatgcattcaaatatatcatcataattgga 23151843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 20561741 - 20561636
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| |    
T  20561741 ttcaacatataccaatttctcatactttgaacatgtaattcaactaacaacaattcaattatctataacttcatacatccaaacatgtcatcataattag 20561642  T
Q  217 agcaca 222  Q
    ||||||    
T  20561641 agcaca 20561636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 18041663 - 18041547
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||||||| | ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||| || | |    
T  18041663 aattcaacaatttgagtacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcttgtact 18041564  T
Q  196 caaacataacatcataa 212  Q
    |||||||| | ||||||    
T  18041563 caaacatatcgtcataa 18041547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 23158329 - 23158401
Alignment:
Q  148 catgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||||||| ||||||| ||||||  |  |||||||||||||||||| ||||||||||||||||    
T  23158329 catgaaatttcaccaacaacaattcatttatcactagtttcatgcattcaaacatatcatcataattggagca 23158401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 22497346 - 22497224
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||| | |||||||| ||||||| ||||| |||||||||||||| ||| ||||    
T  22497346 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttca 22497247  T
Q  190 tgcattcaaacataacatcataa 212  Q
    |  | ||||||||| ||||||||    
T  22497246 tctactcaaacatatcatcataa 22497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 37653747 - 37653629
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||| ||||| |||||||||||||| ||| |||||||||     
T  37653747 aattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcagcaacaacaattcaattatcaccaaattcatgcata 37653648  T
Q  196 caaacataacatcataatt 214  Q
    |||||| | || |||||||    
T  37653647 caaacacatcaccataatt 37653629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 15969962 - 15970062
Alignment:
Q  121 acatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||| | ||||  ||||||||| |||  ||||||||||||| ||| |||||||||| ||| ||| | | | |||||||||||||||||||||||||    
T  15969962 acatatatcattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttctttcgtacaaacataacatcataattggagca 15970061  T
Q  221 c 221  Q
    |    
T  15970062 c 15970062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 27233162 - 27233096
Alignment:
Q  155 tttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||| | |||||||||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  27233162 tttcaccaaaaacaattcaattatcaccaatttcatgtattcaaacatatcatcataattagagcac 27233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 20481761 - 20481846
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||  | |||||||| |||||||||||  |||||||||| ||||||    
T  20481761 tcatactttgaacatgtaattcaactaacaacaattcaattattcataacttcatacattcaaacatgtcatcataattagagcac 20481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 20573279 - 20573198
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||||||||||  |||||||||| ||||||    
T  20573279 actttgaacatgtaattcaactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataattagagcac 20573198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 6774346 - 6774280
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  6774346 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 6774280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 16405075 - 16404997
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  16405075 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 16404997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 24549145 - 24549211
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  24549145 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 24549211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 20654000 - 20653944
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||||    
T  20654000 tttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttc 20653944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 76984 - 76854
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  76984 tagcataattcaacaatttgaacataattcaacatatatcactttctcatactttgaacatgaaatttcaccaacaacaattcaattatcaacaatttca 76885  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||| |||||||||| |||||    
T  76884 tgcattcaaacatatcatcataattagagca 76854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 7159 - 7031
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  7159 cataattaaacaatttgagcataattcaacatatatcactttctcatactttgaacattaaatttcactaacaacaattcaattatcaacaacttcatgc 7060  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    ||||||||||| |||||||||| ||||||    
T  7059 attcaaacatatcatcataattagagcac 7031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 35588 - 35719
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  35588 tagcataaatcaacaatttgagtataattcaacatatatcactttctcatactttgaacatgaaatttcactaacaacaattcaattatcaataacttca 35687  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||| ||||||||||    
T  35688 tgcattcaaacatatcatcatgattggagcac 35719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 28649 - 28777
Alignment:
Q  93 cataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgc 192  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||| |||||||||| |||||||    
T  28649 cataattcaacaatttgagcataattcaacatatatcactttctcatactttgaacatataatttcaccaacaacaattcagttatcaacaagttcatgc 28748  T
Q  193 attcaaacataacatcataattggagcac 221  Q
    ||||||||||| |||||||||| ||||||    
T  28749 attcaaacatatcatcataattagagcac 28777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 84; Significance: 5e-40; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 103059 - 102928
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| ||| || |||||| | || ||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  103059 tagcataattcaacaaatttagcatattccaccatataccactttctcatactttgaacatgaaatttcactaacaacaattcaattatcaaaaacttca 102960  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||||||||||    
T  102959 tgcattcaaacatatcatcataattggagcac 102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 109700 - 109827
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||||||    
T  109700 tagcaaaattcaacaatttgagcatatttcaacatataccactttctcatactttaaacatgaaatttcattaacaacaattcaattatcaacaacttca 109799  T
Q  190 tgcattcaaacataacatcataattgga 217  Q
    || ||||||||||| ||||||| |||||    
T  109800 tggattcaaacatatcatcatacttgga 109827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 131931 - 132047
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||| ||||||  |||||| | |||| ||||||  ||||||| ||||| ||||||| |||||||||||||| ||| |||||| | |    
T  131931 aattcaacatttagagcacaattcacaatatatcattttcacatactacgaacatgcaattttaccaacaacaattcaattatcaccaatttcatgtact 132030  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  132031 caaacatatcatcataa 132047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 112655 - 112551
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  || |||| |||||||||| |  | |||||||| |||  ||||||  |||||||||| |    
T  112655 ttcaacatataccaatttctcatactttgaacatgtaattcaactaacaacaattcaattgttcataacttcatacatctaaacatgtcatcataattag 112556  T
Q  217 agcac 221  Q
    |||||    
T  112555 agcac 112551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 68040 - 67972
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||||| ||||||| | ||| |||||||||||||| ||| |||||| | | ||||||| ||||||||    
T  68040 tgaacatgcaatttcatctacaacaattcaattatcaccaaattcatgtacttaaacatatcatcataa 67972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 2635 - 2766
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| || || |||||||||||||||||||  ||||||  |||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  2635 tagcataattcaacatttagagcataattcaacatataacactttcatatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 2734  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||| |||||||| |||||||||| ||||||    
T  2735 tgcatccaaacatatcatcataattagagcac 2766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 11204 - 11331
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||| |||| | |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||| ||||||||||||||  |  ||||    
T  11204 tagcatatttcaactatttgagcataattcaacatatatcactttcacacactttgaacatgaaatttcacaaacaacaattcaattatcactagtttca 11303  T
Q  190 tgcattcaaacataacatcataattgga 217  Q
    |||||||||||||| |||||||||||||    
T  11304 tgcattcaaacatatcatcataattgga 11331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 97335 - 97204
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| || || |||||||||||||||||||  |||||| ||||||||||||||| |||| |||||||| |||||||||||||| ||| || |    
T  97335 tagcataattcaacatttagagcataattcaacatataacactttcacatactttgaacatgcaattccaccaacaacaattcaattatcaccaatttta 97236  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| |||||||||| ||||||    
T  97235 tgcattcaaacatatcatcataattagagcac 97204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 70766 - 70854
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||| ||  || |||| ||||||||||||| | |||||||| ||| ||||||| ||||||||||| ||||||    
T  70766 tttctcatactttgaacatgaa-ttcaactaacaacaattcaattatccataacttcatacatccaaacatgacatcataattagagcac 70854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 31181 - 31284
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | ||||| |||||||||||||||| ||  || |||  ||||||||||||| | |||||||| ||| |||||||  |||||||||| |    
T  31181 ttcaacatataccattttcttatactttgaacatgaa-ttcaactaaccacaattcaattatccataacttcatacatccaaacatgtcatcataattag 31279  T
Q  217 agcac 221  Q
    |||||    
T  31280 agcac 31284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 7932 - 8046
Alignment:
Q  107 ttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataaca 206  Q
    ||||||||| ||  |||||||  ||||||||||||||||||||||||||||| | |||| |||||||||||| || ||||||||||||||||||||||||    
T  7932 ttgagcatattttcacatataccactttctcatactttgaacatgaaatttctctaacaacaattcaattataaataacttcatgcattcaaacataaca 8031  T
Q  207 tcataattggagcac 221  Q
    |||||||||||||||    
T  8032 tcataattggagcac 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 3446 - 3560
Alignment:
Q  107 ttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataaca 206  Q
    ||||||||| ||  |||||||  ||||||||||||||||||||| ||||||| | |||| |||||||||||| || ||||||||||||||||||||||||    
T  3446 ttgagcatattttcacatataccactttctcatactttgaacattaaatttctctaacaacaattcaattataaataacttcatgcattcaaacataaca 3545  T
Q  207 tcataattggagcac 221  Q
    |||||||||||||||    
T  3546 tcataattggagcac 3560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 43910 - 43805
Alignment:
Q  115 aattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    |||||||||||||| ||||||  || ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  43910 aattcaacatatatcactttcatatcctttgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatagcatcataatt 43811  T
Q  215 ggagca 220  Q
     |||||    
T  43810 agagca 43805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 23809 - 23685
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| |||||| |||||| ||||||||||||||| || ||||    
T  23809 tagcacaattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttctccaacaacaattcaattatcaaaaatttca 23710  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || || |||||||| || |||||||    
T  23709 tgtatacaaacatatcaccataatt 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 93910 - 93779
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||||| ||||  |||||||||||| ||||||| |||  | ||||||||||||||||||||||||||| | |||| | ||||||||||||| |||||||    
T  93910 tagcatacttcaataatttgagcatatttcaacaaataccattttctcatactttgaacatgaaatttctctaacaaccattcaattatcaaaaacttca 93811  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    ||||| || ||||| |||||||||||||||||    
T  93810 tgcatacatacatatcatcataattggagcac 93779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 104713 - 104630
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagca 220  Q
    |||||||||||| || || |||||||||| |||||||||||||| ||| || |||||| |||||||| ||||||| || |||||    
T  104713 catactttgaacctgcaaattcaccaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcatagttagagca 104630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 197384 - 197261
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || |||||||||||||| ||||  |||||| |||||||||||| || ||||||||||||| |||||||||||||||||| ||||| ||||    
T  197384 aattcaacatttagagcataattcaacttataacactttcacatactttgaacttgcaatttcaccaacaacaattcaattatcaacaatttcatacatt 197285  T
Q  196 caaacataacatcataattggagc 219  Q
    |||||||| |||||||||| ||||    
T  197284 caaacatatcatcataattagagc 197261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 53456 - 53586
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||| | || || |||||||||||||||||||  || ||| ||||||||||||||| ||||||||||||| |||||||||||||| |||  |||    
T  53456 tagcataattgaacatttagagcataattcaacatataacaccttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatatca 53555  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
    |||||||||||||| |||||| ||| |||||    
T  53556 tgcattcaaacatatcatcattattagagca 53586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 85649 - 85773
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    ||||||| |||||||||||||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  85649 aattcattaatttgagcataattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 85748  T
Q  196 caaacataacatcataattggagcac 221  Q
     ||||||| |||||||||| ||||||    
T  85749 -aaacatatcatcataattagagcac 85773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 148884 - 148963
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||| |||||||||||||    | ||||||||| ||| ||||||||| |||||||| ||||| | ||||||||||    
T  148884 tttgaacatgtaatttcaccaacaatcttacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcaca 148963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 451 - 528
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  451 catactttgaacatgaaatttcaccaacaacaatataattatcaacaacttcatgcattcaaacataacatcataatt 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 116688 - 116564
Alignment:
Q  93 cataattcatcaatttgagca-taattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatg 191  Q
    ||||| ||||| ||||||||| || |||||||||||| | |||||||||||||||||||||||    ||| ||| |||||||||||||||||| ||||||    
T  116688 cataaatcatccatttgagcaatatttcaacatatatcattttctcatactttgaacatgaaa----acccaca-caattcaattatcaacaatttcatg 116594  T
Q  192 cattcaaacataacatcataattggagcac 221  Q
    | ||||||||||||||||||||||||||||    
T  116593 ccttcaaacataacatcataattggagcac 116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9019 - 8888
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | | |||||||||  ||||||||||| | |||||||||||||||||||||||||  || |||| ||||||||||||| | |||||||    
T  9019 tagcataattcaaccaattgagcatatatcaacatatatcattttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttca 8920  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    | |||||||||||  |||||||||| ||||||    
T  8919 tacattcaaacatgtcatcataattagagcac 8888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 31150 - 31261
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||||||||||||  |||||| |||||| |||||||| ||||||||||||| |||| ||||||||| ||| |||||||||||||| ||| |||||    
T  31150 agcataattcaacatataacactttcacatactatgaacatgcaatttcaccaacaacaatccaattatcaccaatttcatgcattcaaatatatcatca 31249  T
Q  210 taattggagcac 221  Q
    ||||| ||||||    
T  31250 taattagagcac 31261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 69567 - 69698
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || |||||||||||||||||||  |||||| |||||||| |||||| ||||||||| ||| |||||||||||| | ||| ||||    
T  69567 tagcacaattcaacatttagagcataattcaacatataacactttcacatactttaaacatgcaatttcacctacaacaattcaattataaccaatttca 69666  T
Q  190 tgcattcaaacataacatcataattggagcac 221  Q
    |||||| ||||||| |||||||||| ||||||    
T  69667 tgcatttaaacatatcatcataattagagcac 69698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 33865 - 33735
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    |||||||||||| | | || |||||| |||||||||||  ||||  ||||||||| ||||||||||| ||| |||| ||||||||||||| |||||||||    
T  33865 tagcataattcaaccaatttagcatatttcaacatataacacttcttcatactttaaacatgaaattccactaacaacaattcaattatccacaacttca 33766  T
Q  190 tgcattcaaacataacatcataattggagca 220  Q
     ||||||||||||  ||||||||||||||||    
T  33765 agcattcaaacatgtcatcataattggagca 33735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 108120 - 108241
Alignment:
Q  91 agcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcat 190  Q
    ||||||||||| || || ||||||||||||  |||||  | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  108120 agcataattcaacatttagagcataattcataatataccattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcat 108219  T
Q  191 gcattcaaacataacatcataa 212  Q
    | | ||||||||||||||||||    
T  108220 gtactcaaacataacatcataa 108241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 7812 - 7690
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  7812 tagcacaattcaacaattagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 7713  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  7712 tgtagtcaaacatatcatcataa 7690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 3361 - 3483
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||  ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  3361 tagcacaattcaacaattagagcccaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 3460  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || ||||||||||| ||||||||    
T  3461 tgtattcaaacatatcatcataa 3483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 4721 - 4839
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| || || ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||||||||    
T  4721 aattcaacatttagagcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatt 4820  T
Q  196 caaacataacatcataatt 214  Q
    |||||||| || |||||||    
T  4821 caaacatatcaccataatt 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 27607 - 27729
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || | ||| ||||||  |||||| | |||| |||||| |||||||||||||||||||||| |||||||||||||| ||| ||||    
T  27607 tagcacaattcaacatttagggcacaattcacaatatatcattttcacatactatgaacatgaaatttcaccaacaacaattcaattatcaccaatttca 27706  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || ||||||||||| ||||||||    
T  27707 tgtattcaaacatatcatcataa 27729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 86467 - 86589
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||  | |||| |||||| |||||||  |||||||||||||  |||||||||||||  || ||||    
T  86467 tagcacaattcaacatttagagcacaattcacaatataacattttcacatactatgaacatccaatttcaccaacaaaaattcaattatcacaaatttca 86566  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| || |||||    
T  86567 tgtactcaaacatatcaacataa 86589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 30074 - 30195
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||||| ||| |||||||||||||| ||| ||||    
T  30074 tagcacaattcaacaattagagcaaaattcacaatatatcattttcacatactatgaacatgcaatttcacctacaacaattcaattatcaccaatttca 30173  T
Q  190 tgcattcaaacataacatcata 211  Q
    || ||||||||||| |||||||    
T  30174 tgtattcaaacatatcatcata 30195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 22151 - 22230
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcata 211  Q
    |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||||  | |||||||||||||||||    
T  22151 tttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatatactcaaacataacatcata 22230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 214
Target Start/End: Complemental strand, 1099 - 975
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| |||||   |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  1099 tagcacaattcaacatttagagcacaattcccaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttca 1000  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || ||||||||||| ||||||||||    
T  999 tgtattcaaacatatcatcataatt 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 2025 - 2158
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | ||||||||| || || ||||||  | |||| ||||||||||||||||||||  || |||| ||||||||||||| | ||||||    
T  2025 tagcataattcaaccaattgagcatattttcatcatataccattttcgcatactttgaacatgaaattcaactaacaacaattcaattatccataacttc 2124  T
Q  189 atgcattcaaacataacatcataattggagcaca 222  Q
    || |||||||||||  |||||||||| |||||||    
T  2125 atacattcaaacatgtcatcataattagagcaca 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 16051 - 16140
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||  || |||| ||||||||||||| | |||||||| |||||||||||  |||||||||| ||||||    
T  16051 tttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattcaaacatgtcatcataattagagcac 16140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 11840 - 11929
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||  || |||| ||||||||||||| | |||||||| |||| ||||||  |||||||||| ||||||    
T  11840 tttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattgaaacatgtcatcataattagagcac 11929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 25582 - 25671
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||  || |||| ||||||||||||| | |||||||| |||| ||||||  |||||||||| ||||||    
T  25582 tttctcatactttgaacatgaaattcaactaacaacaattcaattatccataacttcatacattaaaacatgtcatcataattagagcac 25671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 1466 - 1354
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||| ||||| ||||||| | |||| |||||||||| |||| ||||||||||||| |||| ||||||||| ||| || |||||| |||||||| ||||    
T  1466 gagcatgattcatcatatatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatc 1367  T
Q  209 ataattggagcac 221  Q
    ||| || ||||||    
T  1366 atagttagagcac 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 9721 - 9609
Alignment:
Q  109 gagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatc 208  Q
    |||||| ||||| ||||||| | |||| |||||||||| |||| ||||||||||||| |||| ||||||||| ||| || |||||| |||||||| ||||    
T  9721 gagcatgattcatcatatatcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatc 9622  T
Q  209 ataattggagcac 221  Q
    ||| || ||||||    
T  9621 atagttagagcac 9609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 8167 - 8251
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||||||| || |||||||||| |||||||||||||| ||| ||||||||| |||||||| ||||||| || ||||||    
T  8167 catactttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcac 8251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 33799 - 33903
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||||||||||  |||||||||| |    
T  33799 ttcaacatataccaatttctcatactttgaacatgtaattcaactaacaacaattcaattatctataacttcatacattcaaacatgtcatcataattag 33898  T
Q  217 agcac 221  Q
    |||||    
T  33899 agcac 33903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 159409 - 159541
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| | | |||||||||||| ||||  |||| | |||||||||||||||||||||||||  || |||| |||| | |||||| | ||||||    
T  159409 tagcataattcaaccaattgagcataatttcaactcatatcattttctcatactttgaacatgaaattcaactaacaacaatgccattatccataacttc 159508  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || |||||||||||  |||||||||| ||||||    
T  159509 atacattcaaacatgtcatcataattagagcac 159541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 85484 - 85573
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  ||||| |||| ||||||    
T  85484 tttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcacaattagagcac 85573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 6094 - 6183
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||||||||||||  ||||||| |||| |||||||| | |||||||| |||||||||||  | |||||||| ||||||    
T  6094 tttctcatactttgaacatgaaattctaccaacaacaatccaattatccataacttcatacattcaaacatgtcgtcataattagagcac 6183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 8606 - 8719
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||| | |||| |||||| |||||||| ||||||| ||||| |||||||||||||| ||| |||||| | |    
T  8606 aattcaacaattagagcacaattcataatatatcattttcacatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtact 8705  T
Q  196 caaacataacatca 209  Q
    |||||||| |||||    
T  8706 caaacatatcatca 8719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 6654 - 6778
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| ||||||||| |||| |||  |||||| | |||| |||||| |||||||| ||||||||||| | |||||||||||||| ||| | ||    
T  6654 tagcacaattcaacaatttgagtataactcacaatatatcattttcacatactatgaacatgcaatttcaccaataacaattcaattatcaccaattcca 6753  T
Q  190 tgcattcaaacataacatcataatt 214  Q
    || ||| ||||||| || |||||||    
T  6754 tgtatttaaacatatcaccataatt 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 14150 - 14268
Alignment:
Q  94 ataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgca 193  Q
    |||||||| || || ||||| ||||||  |||||  | |||| |||||| |||||||| |||||||||| ||  ||||||||||||| ||| |||||| |    
T  14150 ataattcaacatttagagcacaattcacaatataccattttcacatactatgaacatgcaatttcaccagcaataattcaattatcaccaatttcatgta 14249  T
Q  194 ttcaaacataacatcataa 212  Q
     ||||||||||||||||||    
T  14250 ctcaaacataacatcataa 14268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 37668 - 37790
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| || || ||||| ||||||  |||||  | |||| |||||| |||||||| ||||||||||||| |||||||||| ||| ||| ||||    
T  37668 tagcacaattcaacatttagagcacaattcacaatataccattttcacatactatgaacatgcaatttcaccaacaacaattcaattttcaccaatttca 37767  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  37768 tgtactcaaacatatcatcataa 37790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 25456 - 25578
Alignment:
Q  90 tagcataattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttca 189  Q
    ||||| |||||| |||||  |||| ||||||  |||||| | |||| |||||| |||||| | ||||||||||||| |||||||||| ||| ||| ||||    
T  25456 tagcacaattcaacaattaaagcacaattcacaatatatcattttcacatactatgaacaggcaatttcaccaacaacaattcaattttcaccaatttca 25555  T
Q  190 tgcattcaaacataacatcataa 212  Q
    || | ||||||||| ||||||||    
T  25556 tgtactcaaacatatcatcataa 25578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 68014 - 67912
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||| ||||||  |||||| | |||| |||||| |||||||| ||||||||||||| |||||||||||||| ||| |||| | | ||||||||| |||||    
T  68014 agcacaattcacaatatatcattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcacgtactcaaacatatcatca 67915  T
Q  210 taa 212  Q
    |||    
T  67914 taa 67912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 9097 - 9228
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||  |  ||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||||    
T  9097 tagcataattcaccaatt-gagcatattttcaacatataccaacttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttc 9195  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || |||  ||||||  |||||||||| ||||||    
T  9196 atacatctaaacatgtcatcataattagagcac 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 21622 - 21752
Alignment:
Q  90 tagcataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttc 188  Q
    |||||||||||| ||||| ||||||| || |||||||||  | |||||||||||||||||||| ||||  || |||| |||| |||||||| | ||||||    
T  21622 tagcataattcaccaatt-gagcatattttcaacatataccattttctcatactttgaacatgtaattcaactaacaacaatccaattatc-ataacttc 21719  T
Q  189 atgcattcaaacataacatcataattggagcac 221  Q
    || ||| |||||||  |||||||||| ||||||    
T  21720 atacatccaaacatgtcatcataattagagcac 21752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 31348 - 31444
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataatt 214  Q
    |||||||||||  | |||||||||||||||||||  ||||  || |||| |||| |||||||| | |||||||| ||| |||||||  ||||||||||    
T  31348 ttcaacatataccattttctcatactttgaacatttaattcaactaacaacaatccaattatc-ataacttcatacatccaaacatgtcatcataatt 31444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 22516 - 22453
Alignment:
Q  140 actttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacata 203  Q
    |||||||||||| || |||||||||| |||||||||||||| ||| ||||||||| ||||||||    
T  22516 actttgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacata 22453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 7532 - 7642
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||| ||||||  |||||| | |||| |||||| |||  ||| |||||||||||||  |||||||||||||  || |||||| ||||||||||| |||||    
T  7532 agcacaattcacaatatatcattttcacatactatgagaatgcaatttcaccaacaataattcaattatcactaatttcatgtattcaaacatatcatca 7631  T
Q  210 taattggagca 220  Q
    ||||| |||||    
T  7632 taattagagca 7642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 16957 - 17067
Alignment:
Q  110 agcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||| ||||||  |||||| | |||| |||||| |||  ||| |||||||||||||  |||||||||||||  || |||||| ||||||||||| |||||    
T  16957 agcacaattcacaatatatcattttcacatactatgagaatgcaatttcaccaacaataattcaattatcactaatttcatgtattcaaacatatcatca 17056  T
Q  210 taattggagca 220  Q
    ||||| |||||    
T  17057 taattagagca 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 109557 - 109467
Alignment:
Q  132 tttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| |||||||    
T  109557 tttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcaca 109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 118073 - 117968
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  |  ||||||||||||||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| |    
T  118073 ttcaacatataccaacttctcatactttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattag 117974  T
Q  217 agcaca 222  Q
    ||||||    
T  117973 agcaca 117968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 1494 - 1622
Alignment:
Q  93 cataattcatcaatttgagcataatt-caacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatg 191  Q
    ||||||||| ||||| ||||||| || |||||||||  | |||||||||||||||||||  ||||  ||||||| ||||||||||||  | ||||||||     
T  1494 cataattcaacaatt-gagcatattttcaacatataccaatttctcatactttgaacatataattcaaccaacaacaattcaattattcataacttcata 1592  T
Q  192 cattcaaacataacatcataattggagcac 221  Q
    |||  ||||||  |||||||||| ||||||    
T  1593 catctaaacatgtcatcataattagagcac 1622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 686 - 582
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  | |||||||||||||||||||| ||||  |  |||| |||||| |||||| | || ||||| |||||||||||  |||||||||| |    
T  686 ttcaacatataccattttctcatactttgaacatgtaattcaattaacaacaattctattatccataatttcatacattcaaacatgtcatcataattag 587  T
Q  217 agcac 221  Q
    |||||    
T  586 agcac 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 1636 - 1552
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||| |||| | || |||||||||| ||||||||||||||  || ||||||||| |||||||| ||||||| || ||||||    
T  1636 catacttttaacaagcaaattcaccaacaacaattcaattatcactaatttcatgcatacaaacatatcatcatagttagagcac 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 8781 - 8697
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||| |||| | || |||||||||| ||||||||||||||  || ||||||||| |||||||| ||||||| || ||||||    
T  8781 catacttttaacaagcaaattcaccaacaacaattcaattatcactaatttcatgcatacaaacatatcatcatagttagagcac 8697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 123264 - 123186
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| |||||||||||    
T  123264 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacaattggagcac 123186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 10819 - 10893
Alignment:
Q  137 catactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcata 211  Q
    ||||||||||||||| || ||| || ||| ||| |||||||||| ||| ||||||||| |||||||| |||||||    
T  10819 catactttgaacatgcaaattctccgacaacaactcaattatcatcaatttcatgcatacaaacatatcatcata 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 24819 - 24733
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcaca 222  Q
    |||||||||||||||| ||||  || |||| ||||| ||||||||| |||||||| |||  ||||||  |||||||||| |||||||    
T  24819 tcatactttgaacatgtaattcaactaacaacaatttaattatcaataacttcatacatctaaacatgtcatcataattagagcaca 24733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 4720 - 4805
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  4720 tcatactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataattagagcac 4805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 9334 - 9419
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  9334 tcatactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataattagagcac 9419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 7329 - 7414
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  7329 tcatactttgaacatgtaattcaaccaacaacaattcaattattcataacttcatacatctaaacatgtcatcataattagagcac 7414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 158 - 219
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattat 178  Q
    |||||||||||  | |||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  158 ttcaacatataccaatttctcatactttgaacatgcaattcaaccaacaacaattcaattat 219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 11659 - 11574
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  | ||||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| ||||||    
T  11659 tcatactttgaacatgtaattcaatcaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattagagcac 11574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 5078 - 5183
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattgg 216  Q
    |||||||||||  |  |||||||||| |||||||| ||||  || |||| ||||||||||||| | |||||||| |||  ||||||  |||||||||| |    
T  5078 ttcaacatataccaacttctcatactgtgaacatgtaattcaactaacaacaattcaattatccataacttcatacatctaaacatgtcatcataattag 5177  T
Q  217 agcaca 222  Q
    ||||||    
T  5178 agcaca 5183  T

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Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 34559 - 34494
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  34559 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 34494  T

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Target: scaffold0601 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 963 - 895
Alignment:
Q  144 tgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataa 212  Q
    |||||||| ||||||| ||||| |||||||||||||| ||| |||||  | ||||||||| ||||||||    
T  963 tgaacatgcaatttcatcaacaacaattcaattatcaccaaattcatttactcaaacatatcatcataa 895  T

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Target: scaffold0190 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10098 - 10178
Alignment:
Q  141 ctttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    ||||||||||| ||||  || |||| ||||||||||||| | |||||||| ||| |||||||  |||||||||| ||||||    
T  10098 ctttgaacatgtaattcaactaacaacaattcaattatccataacttcatacatccaaacatgtcatcataattagagcac 10178  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 253099 - 253003
Alignment:
Q  117 ttcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataat 213  Q
    |||||||||||  | |||||||||||||||| ||| ||||  || |||| |||||||||||||   |||||||| ||| |||||||  |||||||||    
T  253099 ttcaacatataccaatttctcatactttgaaaatgtaattcaactaacaacaattcaattatccctaacttcatacatccaaacatgtcatcataat 253003  T

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Target: scaffold1542 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 634 - 556
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  634 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 556  T

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Target: scaffold0420 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 13413 - 13347
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  13413 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 13347  T

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Target: scaffold0413 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 6164 - 6086
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  6164 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 6086  T

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Target: scaffold0266 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 3682 - 3604
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  3682 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 3604  T

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Target: scaffold0215 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 9437 - 9371
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  9437 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 9371  T

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Target: scaffold0215; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 16335 - 16269
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  16335 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 16269  T

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Target: scaffold0175 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 1056 - 978
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  1056 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 978  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 48761 - 48839
Alignment:
Q  142 tttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||| |||||||||||||   || ||||||||| ||| ||||||||| |||||||| ||||| | |||||||||    
T  48761 tttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatcacagttggagcac 48839  T

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Target: scaffold0634 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 5599 - 5653
Alignment:
Q  167 caattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||| ||| |||||| ||||||||||| || ||||||| ||||||    
T  5599 caattcaattatcaccaatttcatgtattcaaacatatcaccataattagagcac 5653  T

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Target: scaffold0132 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 13670 - 13735
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  13670 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 13735  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 41812 - 41877
Alignment:
Q  143 ttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatca 209  Q
    ||||||||| |||||||||||||   || ||||||||| ||| ||||||||| ||||||||||||||    
T  41812 ttgaacatgtaatttcaccaacaatcatacaattatcatcaa-ttcatgcatacaaacataacatca 41877  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 1473 - 1558
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  |||| || ||||||||||||| | |||||||| |||  ||||||  |||||| ||| ||||||    
T  1473 tcatactttgaacatgtaattcaaccaccaacaattcaattatccataacttcatacatctaaacatgtcatcatgattagagcac 1558  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 22847 - 22932
Alignment:
Q  136 tcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcac 221  Q
    |||||||||||||||| ||||  || |||| ||||||||||||  | |||||||| |||  ||||||  |||||||||| ||||||    
T  22847 tcatactttgaacatgtaattcaactaacaacaattcaattattcaaaacttcatacatctaaacatgtcatcataattagagcac 22932  T

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Target: scaffold0561 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 2903 - 2787
Alignment:
Q  96 aattcatcaatttgagcataattcaacatatattactttctcatactttgaacatgaaatttcaccaacatcaattcaattatcaacaacttcatgcatt 195  Q
    |||||| ||||| ||||| ||||||  |||||  | |||| |||| | |||| ||| ||||| | ||||| | |||||||||||| ||| |||||| | |    
T  2903 aattcaacaattagagcacaattcacaatataccattttcacatattatgaaaatgcaattttatcaacaacgattcaattatcaccaatttcatgtact 2804  T
Q  196 caaacataacatcataa 212  Q
    |||||||| ||||||||    
T  2803 caaacatatcatcataa 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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