View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1240-INSERTION-2 (Length: 546)
Name: NF1240-INSERTION-2
Description: NF1240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1240-INSERTION-2 |
 | |
|
| [»] chr6 (16 HSPs) |
| |
|
| [»] scaffold0264 (1 HSPs) |
| |
|
| [»] scaffold0074 (1 HSPs) |
| |
|
| [»] scaffold0007 (1 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 339; Significance: 0; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 140 - 546
Target Start/End: Original strand, 21966882 - 21967287
Alignment:
| Q |
140 |
aatcaatgcatcattccaattcattttatcactagtaagtattacgtccttcattaccaacaaagctatacaaattacatatct--tcattccctatcct |
237 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| ||| || || |||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
21966882 |
aatcattgcatcattccaattcattt-atcactagtaattatgt--tctttaattaccaacaaagctatacaaattacatatatcgtcattccctatcct |
21966978 |
T |
|
| Q |
238 |
tctcaagtaataggaattgaggttagaacaaatattgttcacaacaatcatacaattaaaagaaaacctaacaatctaccgaggaaaaaatgtacttgaa |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21966979 |
tctcaagtaataggaattgaggttagaacaaatattgttcacaacaatcatacaattaaaagaaaacctaacaatctaccgaggaaaaaatgtacttgaa |
21967078 |
T |
|
| Q |
338 |
ggcattccattgctagagaatagggcagaactatcattataggttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgac |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21967079 |
ggcattccattgctagagaatagggcagaactatcattgtaggttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgac |
21967178 |
T |
|
| Q |
438 |
tgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagtttt |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21967179 |
tgctaagataagaagcaattgtcaagattgaaggtctagcctctggatcattttgaacacataatagaccaatctgaatgcacttaatgacttcagtttt |
21967278 |
T |
|
| Q |
538 |
agaataatc |
546 |
Q |
| |
|
|||| |||| |
|
|
| T |
21967279 |
agaaaaatc |
21967287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 91 - 546
Target Start/End: Original strand, 22001123 - 22001557
Alignment:
| Q |
91 |
tccatcctttaagatcatatattaggtcaaattgtattctctctcaatcaatcaatgcatcattccaattcattttatcactagtaagtattacgtcctt |
190 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
22001123 |
tccatcctttaggatcatatattaggtcaacttgtattctctctcaatcaat----gcatcattccaattcatttcatcact---------tacgtcctt |
22001209 |
T |
|
| Q |
191 |
cattaccaacaaagctatacaaattacatatcttcattccctatccttctcaagtaataggaattgaggttagaacaaatattgttcacaacaatcatac |
290 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
22001210 |
tattaccaataaagctatacaaattacatatccccattccctatcctcttcaagtaatagaaattgaggttagaacaaatactgttcacaacaa------ |
22001303 |
T |
|
| Q |
291 |
aattaaaagaaaacctaacaatctaccgaggaaaaaatgtacttgaaggcattccattgctagagaatagggcagaactatcattataggttctaccttg |
390 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
22001304 |
--ttaaaagaaaacctgacaatctaccgaggaaaaaaagtacttgaaggcattccattgctagagaatagggcagaactatcattgtaggatctaccttg |
22001401 |
T |
|
| Q |
391 |
caggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcattt |
490 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22001402 |
caggaaaaatgcaggttgttgtggagttcgtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcattt |
22001501 |
T |
|
| Q |
491 |
tgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22001502 |
tgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
22001557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 240 - 546
Target Start/End: Original strand, 22085309 - 22085616
Alignment:
| Q |
240 |
tcaagtaataggaattgaggttagaacaaatattgttcacaacaatcatacaattaaaagaaaacctaacaatctaccgaggaaaaaatgtacttgaagg |
339 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| ||||||| |
|
|
| T |
22085309 |
tcaagtaatagaaattgaggttagaacaaatactgttcacaacaat--------taaaagaaaacctgacaatctatcgaggaaaaaaagtagttgaagg |
22085400 |
T |
|
| Q |
340 |
cattccattgctagagaatagggcagaactat---------cattataggttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaatt |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085401 |
cattccattgctagagaatagggcagaactattggcatattcattataatttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaatt |
22085500 |
T |
|
| Q |
431 |
gaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcattttgaacacataatagaccaatctgaatgcacttaatgactt |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22085501 |
gaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcattttgaacacataatagaccaatctgaatgcacttaatgactt |
22085600 |
T |
|
| Q |
531 |
cagttttagaataatc |
546 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
22085601 |
cagttttagaataatc |
22085616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 21967569 - 21967733
Alignment:
| Q |
382 |
tctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctct |
481 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21967569 |
tctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctct |
21967668 |
T |
|
| Q |
482 |
gggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21967669 |
ggatcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaaaaatc |
21967733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 18990386 - 18990550
Alignment:
| Q |
382 |
tctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctct |
481 |
Q |
| |
|
|||||| |||| |||||| ||||||| | ||||||||||||| |||| || || | |||||||||||||||||| ||||| ||| ||||||||||| || |
|
|
| T |
18990386 |
tctaccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatcc |
18990485 |
T |
|
| Q |
482 |
gggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
18990486 |
gggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatc |
18990550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 20083328 - 20083494
Alignment:
| Q |
380 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
479 |
Q |
| |
|
|||||||| |||| |||||| ||||||| | ||||||||||||| |||| || || |||||||||||||||||||| ||||| ||| |||||||| || | |
|
|
| T |
20083328 |
gttctaccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataactgctaagataagaagcaactgtcacgatcgaaggtctggcat |
20083427 |
T |
|
| Q |
480 |
ctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
20083428 |
ccgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatc |
20083494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 22209851 - 22209685
Alignment:
| Q |
380 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
479 |
Q |
| |
|
|||||||| |||| |||||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| |||| |||||||||||||| | |
|
|
| T |
22209851 |
gttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgcaattgaaggtctagcat |
22209752 |
T |
|
| Q |
480 |
ctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||| |
|
|
| T |
22209751 |
ccgggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatc |
22209685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 18994974 - 18995140
Alignment:
| Q |
380 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
479 |
Q |
| |
|
|||||||| |||| |||||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
18994974 |
gttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcat |
18995073 |
T |
|
| Q |
480 |
ctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||| |
|
|
| T |
18995074 |
tcgggtcattttgaacacataacagaccaatctgaatgcatttaatgacttcatttgcagaataatc |
18995140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 21999021 - 21999132
Alignment:
| Q |
75 |
ctatcatatagttatatccatcctttaagatcatatattaggtcaaattgtattctctctcaatcaatcaatgcatcattccaattcattttatcactag |
174 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21999021 |
ctatcatatagttatatccatcctttaggatcatatattaggtcaaattgtattctctc----tcaatcaatgcatcattccaattcatttcatcactag |
21999116 |
T |
|
| Q |
175 |
taagtattacgtcctt |
190 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21999117 |
taagtattacgtcctt |
21999132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 381 - 546
Target Start/End: Original strand, 20235300 - 20235465
Alignment:
| Q |
381 |
ttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctc |
480 |
Q |
| |
|
||||||| |||| |||||| ||||||| || ||||||||||| |||| || || ||||||||| ||||||| || |||| |||||||||||||||| || |
|
|
| T |
20235300 |
ttctaccatgcaagaaaaacgcaggttctttcggagttggtaattcaactgcataactgctaaggtaagaagaaactgtcgagattgaaggtctagcatc |
20235399 |
T |
|
| Q |
481 |
tgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
20235400 |
cgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatc |
20235465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 381 - 546
Target Start/End: Original strand, 22129284 - 22129449
Alignment:
| Q |
381 |
ttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctc |
480 |
Q |
| |
|
||||||| |||| |||||| ||||||| || ||||||||||| |||| || || ||||||||| ||||||| || |||| |||||||||||||||| || |
|
|
| T |
22129284 |
ttctaccatgcaagaaaaacgcaggttctttcggagttggtaattcaactgcataactgctaaggtaagaagaaactgtcgagattgaaggtctagcatc |
22129383 |
T |
|
| Q |
481 |
tgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
22129384 |
cgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatc |
22129449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 395 - 542
Target Start/End: Original strand, 18979048 - 18979194
Alignment:
| Q |
395 |
aaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcattttgaa |
494 |
Q |
| |
|
||||| ||||||| ||| ||||||||||| |||| || || ||||||||||||||||| || ||||| || ||||||||| | || ||||||||| ||| |
|
|
| T |
18979048 |
aaaaacgcaggttcttgcggagttggtaattcaactgcataactgctaagataagaaggaactgtcacaatcgaaggtcta-catccgggtcatttcgaa |
18979146 |
T |
|
| Q |
495 |
cacataatagaccaatctgaatgcacttaatgacttcagttttagaat |
542 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||| || |||||| |
|
|
| T |
18979147 |
cacataatcgaccaatctaaatgcacttaatgacttcatttgtagaat |
18979194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 22085229 - 22085300
Alignment:
| Q |
149 |
atcattccaattcattttatcactagtaagtattacgt--ccttcattaccaacaaagctatacaaattacat |
219 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
22085229 |
atcattccaattcattttatcactagtg-gtatgacgatgcctttattaccaacaaagctatacaaattacat |
22085300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 21998533 - 21998583
Alignment:
| Q |
7 |
agtattatggaaccaagaataggtgtgcctctttagtcagcaagacccgtgct |
59 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
21998533 |
agtattatggaaagaagaataggtg--cctctttagtcggcaagacccgtgct |
21998583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 20233861 - 20233809
Alignment:
| Q |
491 |
tgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaata |
543 |
Q |
| |
|
||||| ||||||| ||||||||||||||| ||||| |||||| ||| |||||| |
|
|
| T |
20233861 |
tgaacgcataataaaccaatctgaatgcatttaattacttcaatttcagaata |
20233809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 22127845 - 22127793
Alignment:
| Q |
491 |
tgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaata |
543 |
Q |
| |
|
||||| ||||||| ||||||||||||||| ||||| |||||| ||| |||||| |
|
|
| T |
22127845 |
tgaacgcataataaaccaatctgaatgcatttaattacttcaatttcagaata |
22127793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 380 - 546
Target Start/End: Original strand, 14809 - 14975
Alignment:
| Q |
380 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
479 |
Q |
| |
|
|||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| || |||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
14809 |
gttctaccatgcaagaaaaacgcaggttcttgtggagttggtaaatcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcat |
14908 |
T |
|
| Q |
480 |
ctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
14909 |
tcgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatc |
14975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 50485 - 50319
Alignment:
| Q |
380 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
479 |
Q |
| |
|
|||||||| |||| |||||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
50485 |
gttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcat |
50386 |
T |
|
| Q |
480 |
ctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
50385 |
tcgggtcattttgaacacataacagaccaatctgaatgcatttaatgacttcatttgtagaataatc |
50319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 380 - 546
Target Start/End: Complemental strand, 8019 - 7853
Alignment:
| Q |
380 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
479 |
Q |
| |
|
|||||||| |||| || ||| ||||||| || |||||||||||| ||||||| || |||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
8019 |
gttctaccatgcaagagaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaattgaaggtctagcat |
7920 |
T |
|
| Q |
480 |
ctgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatc |
546 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
7919 |
tcgggtcattttgaacacataacagaccaatctgaatgcatttaatgacttcatttgtagaataatc |
7853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University