View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12407_low_1 (Length: 1382)
Name: NF12407_low_1
Description: NF12407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12407_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 694; Significance: 0; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 694; E-Value: 0
Query Start/End: Original strand, 58 - 763
Target Start/End: Complemental strand, 39839644 - 39838939
Alignment:
| Q |
58 |
cacaaaagttaaaaaagaattactatgaagcactgacacagataccagacacataaaaggaacctaccgagctacgaacaaccatggaaggtaaagcatg |
157 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
39839644 |
cacaaaagttaaaaaagaattactatgaagcactgacacagataccagacacataaaaggaacttaccgagctacgaacaaccatggaaggtaaagcatg |
39839545 |
T |
|
| Q |
158 |
atgattgctaagatcaagtgagagttccattccagaatttccacatccaacaacaagaactttctttccttcaaaatttttccctgacttgtaatcacaa |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39839544 |
atgattgctaagatcaagtgagagttccattccagaatttccacatccaacaacaagaactttctttccttcaaaatttttccctgacttgtaatcacaa |
39839445 |
T |
|
| Q |
258 |
gcataaacaacttcacctttgaattcagaaagtccttcaatttcaggagtaacacactcagcattttcgccggtagcaacaacaagccacctacaaatat |
357 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39839444 |
gcataaacaacttcacctttgaattcagaaagtccttcaatttcaggagtaacacactcagcattttcgccggtagcaacaacaagccacctacaaatat |
39839345 |
T |
|
| Q |
358 |
actcaacttcatttgtcttgaccctccacaatccactggtttcatcatacttagcagattgaacacactcgttgaattgcgggttgatttcaaatttgtt |
457 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39839344 |
actcaacttcatttgtcttgaccctccacaatccactggtttcatcatacttagcagattgaacacactcgttgaattgcgggttgatttcaaatttgtt |
39839245 |
T |
|
| Q |
458 |
agcatagttttcaaggtagcttatgaattgtttctttgaagggtattcagggaaatcttcaggcattggaaggttaggtagttgacagaattgttttgga |
557 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39839244 |
agcatagttttcaaggtagcttatgaattgtttctttgaagggtattcagggaaatcttcaggcattggaaggttaggtagttgacagaattgttttgga |
39839145 |
T |
|
| Q |
558 |
aggtgaagtttcaatctgtcgtaggctcttttttgccatagtgatgctatgcaatcagctctttcgagaacaacgaagggtactccttgttctctaagac |
657 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39839144 |
aggtgaagtttcaatctgtcgtaggttcttttttgccatagtgatgctatgcaatcagctctttcgagaacaacgaagggtaccccttgttctctaagac |
39839045 |
T |
|
| Q |
658 |
atgctgccgttgcaagaccagatggacctgcacctatgatcacaggtccattgacccaaatgcaacggcgtgagagaaagtcttggtgatcagctagacg |
757 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39839044 |
atgctgccgttgcaagaccagatggacctgcacctatgatcacaggtccattgacccaaatgcaacggcgtgagagaaagtcttggtgatcagctagacg |
39838945 |
T |
|
| Q |
758 |
aaataa |
763 |
Q |
| |
|
|||||| |
|
|
| T |
39838944 |
aaataa |
39838939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 859 - 1339
Target Start/End: Complemental strand, 39838804 - 39838324
Alignment:
| Q |
859 |
tttttgtgattgagagagaatttgatgaagtttggtttatggaattgagaatgtgagtaatggattgaatgaataaagaggaggagttgaagggcttaaa |
958 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39838804 |
tttttgtgattgagagagaatttgatgaagtttggtttatagaattgataatgtgagtaatggattgaatgaataaagaggaggagttgaagggcttaaa |
39838705 |
T |
|
| Q |
959 |
tagaggagaattgcatgtgatagggtgcgggagttattgctctttcaataattatttaattgttaaattggttctgttattaaagtgtatagtttaataa |
1058 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39838704 |
tagaggagaattgcatgtgatagggtgcgggagttattgctctttcaataattatttaattgttaaattggttctgttattaaagtgtatagtttaataa |
39838605 |
T |
|
| Q |
1059 |
acttcttatcatctttgannnnnnnngtttggatcaaatgagttaagtgtcaattgacattgaagtttgatgtctacactgtcaaatcatagtcctgaat |
1158 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
39838604 |
acttcttatcatctttgattttttttgtttggatcaaatgagttaagtgtcaattgacattgaagtttgatgtgtacactgtcaaatcatagtcctgaat |
39838505 |
T |
|
| Q |
1159 |
gttatatgtttttggtatgtgaatattttacaacattatattctgttctattattttattagattctagttgttaaaataatgtgggagggattagtagc |
1258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39838504 |
gttatatgtttttggtatgtgaatattttacaacattatattctgttctattattttattagattctagttgttaaaataatgtgggagggattagtagc |
39838405 |
T |
|
| Q |
1259 |
atatataaatattatgggggaataattctttacttggaaaggtttcttcaatcatcacattcacactcacaatgggttatg |
1339 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39838404 |
atatataaatattatgggggaataattctttacttggaaaggtttcttcaatcatcacattcacactcacaatgggttatg |
39838324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 58 - 485
Target Start/End: Original strand, 39733314 - 39733741
Alignment:
| Q |
58 |
cacaaaagttaaaaaagaattactatgaagcactgacacagataccagacacataaaaggaacctaccgagctacgaacaaccatggaaggtaaagcatg |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
39733314 |
cacaaaagttaaaaaagaattactatgaagcactgacacatataccagacacataaaaggaacttaccgagctacgaacaaccatggaaggtaaagcatg |
39733413 |
T |
|
| Q |
158 |
atgattgctaagatcaagtgagagttccattccagaatttccacatccaacaacaagaactttctttccttcaaaatttttccctgacttgtaatcacaa |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39733414 |
atgattgctaagatcaagtgagagttccattccagaatttccacatccaacaacaagaactttctttccttcaaaatttttccctgacttgtaatcacaa |
39733513 |
T |
|
| Q |
258 |
gcataaacaacttcacctttgaattcagaaagtccttcaatttcaggagtaacacactcagcattttcgccggtagcaacaacaagccacctacaaatat |
357 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39733514 |
gcataaacaacttcacctttgaattcagaaagtccttcaatttcaggagtaacacactcagcattttcgccggtagcaacaacaagccacctacaaatat |
39733613 |
T |
|
| Q |
358 |
actcaacttcatttgtcttgaccctccacaatccactggtttcatcatacttagcagattgaacacactcgttgaattgcgggttgatttcaaatttgtt |
457 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39733614 |
actcaacttcatttgtcttgaccctccacaatccactggtttcatcatacttagcagattgaacacactcgttgaattgcgggttgatttcaaatttgtt |
39733713 |
T |
|
| Q |
458 |
agcatagttttcaaggtagcttatgaat |
485 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
39733714 |
agcatagttttcaaggtagcttatgaat |
39733741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 434 - 574
Target Start/End: Complemental strand, 31290181 - 31290041
Alignment:
| Q |
434 |
ttgcgggttgatttcaaatttgttagcatagttttcaaggtagcttatgaattgtttctttgaagggtattcagggaaatcttcaggcattggaaggtta |
533 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31290181 |
ttgcggggagatttcaaatttgttagcatagtttacaagatagtttatgaactgtttctttgaagggtattcagggaaatcttcaagcattggaaggtta |
31290082 |
T |
|
| Q |
534 |
ggtagttgacagaattgttttggaaggtgaagtttcaatct |
574 |
Q |
| |
|
||||||||||| ||| |||| |||||||||||||| ||||| |
|
|
| T |
31290081 |
ggtagttgacataatggtttaggaaggtgaagtttgaatct |
31290041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 429 - 561
Target Start/End: Original strand, 31290616 - 31290748
Alignment:
| Q |
429 |
ttgaattgcgggttgatttcaaatttgttagcatagttttcaaggtagcttatgaattgtttctttgaagggtattcagggaaatcttcaggcattggaa |
528 |
Q |
| |
|
|||||||| |||| ||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31290616 |
ttgaattgtgggtcgatttcaaatttgttcggatagttttcaaggtagtttatgaactgtttctttgaagggtattcatggaaatcttcaggcattggaa |
31290715 |
T |
|
| Q |
529 |
ggttaggtagttgacagaattgttttggaaggt |
561 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||| |
|
|
| T |
31290716 |
ggttaagtagttgacacaattgtttaggaaggt |
31290748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 879 - 1017
Target Start/End: Complemental strand, 31289764 - 31289626
Alignment:
| Q |
879 |
tttgatgaagtttggtttatggaattgagaatgtgagtaatggattgaatgaataaagaggaggagttgaagggcttaaatagaggagaattgcatgtga |
978 |
Q |
| |
|
||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||| || ||||||||||||| ||||||| |||||||||||| |||| |
|
|
| T |
31289764 |
tttgatgaactttgatttatgtaattgagaatgtgagtgttggattcaatgaataagaagaaggagttgaagggtttaaataaaggagaattgcaagtga |
31289665 |
T |
|
| Q |
979 |
tagggtgcgggagttattgctctttcaataattatttaa |
1017 |
Q |
| |
|
| ||||| ||||||||||||| ||||| ||||||||||| |
|
|
| T |
31289664 |
tggggtgggggagttattgctttttcattaattatttaa |
31289626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 1155 - 1252
Target Start/End: Original strand, 31291958 - 31292055
Alignment:
| Q |
1155 |
gaatgttatatgtttttggtatgtgaatattttacaacattatattctgttctattattttattagattctagttgttaaaataatgtgggagggatt |
1252 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
31291958 |
gaatgttgtatgtttttggtacacgaatattttataacattgtattttgttctattattttattagattctagtcgttaaaataacgtgggagggatt |
31292055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 879 - 978
Target Start/End: Original strand, 31291016 - 31291112
Alignment:
| Q |
879 |
tttgatgaagtttggtttatggaattgagaatgtgagtaatggattgaatgaataaagaggaggagttgaagggcttaaatagaggagaattgcatgtga |
978 |
Q |
| |
|
||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
31291016 |
tttgatgaactttggtttatgaaattgagaatatgagtgttggattgaatgaata---aggaggagtcgataggcttaaatagaggagaattgcatgtga |
31291112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 1277 - 1339
Target Start/End: Complemental strand, 31288744 - 31288682
Alignment:
| Q |
1277 |
ggaataattctttacttggaaaggtttcttcaatcatcacattcacactcacaatgggttatg |
1339 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
31288744 |
ggaataattctttatttggaaaggtttcttcaaccatcacattcacattcacaatgggttatg |
31288682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 636 - 741
Target Start/End: Original strand, 31290746 - 31290851
Alignment:
| Q |
636 |
ggtactccttgttctctaagacatgctgccgttgcaagaccagatggacctgcacctatgatcacaggtccattgacccaaatgcaacggcgtgagagaa |
735 |
Q |
| |
|
||||| ||||||||||||||||||| || ||| || || ||||||||| ||||| |||||||||| ||||| ||| | ||||||||||| ||||||||| |
|
|
| T |
31290746 |
ggtaccccttgttctctaagacatgttgtcgtcgctaggtcagatggacttgcacatatgatcacacgtccactgaactaaatgcaacggagtgagagaa |
31290845 |
T |
|
| Q |
736 |
agtctt |
741 |
Q |
| |
|
|||||| |
|
|
| T |
31290846 |
agtctt |
31290851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 642 - 750
Target Start/End: Complemental strand, 31290016 - 31289908
Alignment:
| Q |
642 |
ccttgttctctaagacatgctgccgttgcaagaccagatggacctgcacctatgatcacaggtccattgacccaaatgcaacggcgtgagagaaagtctt |
741 |
Q |
| |
|
||||||||||||||| |||||| |||||| || ||||||||| || | | ||||||| |||||| || ||||||||||||| ||||||||||||||| |
|
|
| T |
31290016 |
ccttgttctctaagatatgctgacgttgctaggtcagatggacttgtgcttttgatcacgggtccaccgagccaaatgcaacggtgtgagagaaagtctt |
31289917 |
T |
|
| Q |
742 |
ggtgatcag |
750 |
Q |
| |
|
||||||| |
|
|
| T |
31289916 |
catgatcag |
31289908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 1270 - 1327
Target Start/End: Original strand, 31292112 - 31292169
Alignment:
| Q |
1270 |
ttatgggggaataattctttacttggaaaggtttcttcaatcatcacattcacactca |
1327 |
Q |
| |
|
||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
31292112 |
ttatgggtgtataattcgttacttggaaaggtttctttgatcatcacattcacactca |
31292169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1155 - 1200
Target Start/End: Complemental strand, 31288890 - 31288845
Alignment:
| Q |
1155 |
gaatgttatatgtttttggtatgtgaatattttacaacattatatt |
1200 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||||| |||| |
|
|
| T |
31288890 |
gaatgttatatggttttggtatgtgaatgttttacaacattgtatt |
31288845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1207 - 1251
Target Start/End: Complemental strand, 31288803 - 31288759
Alignment:
| Q |
1207 |
tattattttattagattctagttgttaaaataatgtgggagggat |
1251 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||| |||| |
|
|
| T |
31288803 |
tattattttattagattatagttgttaaaataatatgggaaggat |
31288759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 179; Significance: 6e-96; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 6e-96
Query Start/End: Original strand, 122 - 724
Target Start/End: Original strand, 29857435 - 29858052
Alignment:
| Q |
122 |
taccgagctacgaacaaccatggaaggtaaagcatgatgattgctaagatcaagtgagagttccattccagaatttccacatccaacaacaagaactttc |
221 |
Q |
| |
|
|||||||||||||| ||| || |||||| | |||| |||||||| ||||||||| || ||||||||||||||||| ||||| |||||||| | ||||||| |
|
|
| T |
29857435 |
taccgagctacgaagaacaatagaaggtgatgcattatgattgcaaagatcaagagaaagttccattccagaattaccacaaccaacaaccaaaactttc |
29857534 |
T |
|
| Q |
222 |
tttccttcaaaatttttccctgacttgtaatcacaagcataaacaacttcacctttgaattcagaaagt---ccttcaatttcaggagtaacacactcag |
318 |
Q |
| |
|
|| ||| |||| ||| ||||| || ||||||||||||| || || |||||| ||||||||| | | |||||||| | ||| ||||||||| | |
|
|
| T |
29857535 |
ttccctctaaaactttcacctgatttataatcacaagcatgaataatttcacccttgaattcaccacctaacccttcaatataaggcacaacacactctg |
29857634 |
T |
|
| Q |
319 |
cattttcgccggtagcaacaacaagccacctacaaatatactcaacttcattt------------gtcttgaccctccacaatccactggtttcatcata |
406 |
Q |
| |
|
|||| || || |||||||| |||||| |||||||||||||||||||||||||| |||| || |||||||| ||| | || |||||||| |
|
|
| T |
29857635 |
cattctcaccagtagcaaccacaagcgacctacaaatatactcaacttcatttccattggaaacagtctcaactctccacaacccattagtctcatcata |
29857734 |
T |
|
| Q |
407 |
cttagcagattgaacacactcgttgaattgcgggttgatttcaaatttgttagcatagttttcaaggtagcttatgaattgtttctttgaagggtattca |
506 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| | || || ||| |||||| ||| ||||||| |||||||||| || |||||| |
|
|
| T |
29857735 |
tttagcagattgaacacactcgttgaatcgcgggttgatttcaaagtgtttcgcgtaggattcaagatagtttatgaactgtttctttgttggatattca |
29857834 |
T |
|
| Q |
507 |
gggaaatcttcaggcattggaaggttaggtagttgacagaattgttttggaaggtgaagtttcaatctgtcgtaggctcttttttgccatagtgatgcta |
606 |
Q |
| |
|
|| || |||| || | ||||| |||||||||||||||||||||||| || ||||||||||| |||||||| || | |||||||||||||||||| |||| |
|
|
| T |
29857835 |
ggaaattcttgtgggaatggaaagttaggtagttgacagaattgtttagggaggtgaagttttaatctgtcatatgttcttttttgccatagtgaagcta |
29857934 |
T |
|
| Q |
607 |
tgcaatcagctctttcgagaacaacgaagggtactccttgttctctaagacatgctgccgttgcaagaccagatggacctgcacctatgatcacaggtcc |
706 |
Q |
| |
|
|||||| | |||||| ||||| | ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| ||||| |||| || | ||| || |
|
|
| T |
29857935 |
tgcaatttgatctttcaagaaccatgaagggtactccttgttgcttaagacatgctgctgttgctagacctgatggtcctgctcctactattataggacc |
29858034 |
T |
|
| Q |
707 |
attgacccaaatgcaacg |
724 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
29858035 |
atttacccaaatgcaacg |
29858052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 321 - 368
Target Start/End: Complemental strand, 17408021 - 17407974
Alignment:
| Q |
321 |
ttttcgccggtagcaacaacaagccacctacaaatatactcaacttca |
368 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17408021 |
ttttcaccggtagcaaccacaagccacctacaaatatactcaacttca |
17407974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 17408175 - 17408116
Alignment:
| Q |
167 |
aagatcaagtgagagttccattccagaatttccacatccaacaacaagaactttctttcc |
226 |
Q |
| |
|
||||||||| || | |||||| ||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
17408175 |
aagatcaagagaaacttccatgccagaatttccacatccaacaacaagaacattttttcc |
17408116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 492 - 568
Target Start/End: Complemental strand, 17407826 - 17407750
Alignment:
| Q |
492 |
tttgaagggtattcagggaaatcttcaggcattggaaggttaggtagttgacagaattgttttggaaggtgaagttt |
568 |
Q |
| |
|
|||||||||||||||||||| | ||||| | ||||| || ||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
17407826 |
tttgaagggtattcagggaagtgatcagggaatggaaaattgggtagttgacacaattgtttaggaagatgaagttt |
17407750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 106
Target Start/End: Original strand, 19040190 - 19040219
Alignment:
| Q |
77 |
ttactatgaagcactgacacagataccaga |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19040190 |
ttactatgaagcactgacacagataccaga |
19040219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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