View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12409_high_6 (Length: 349)
Name: NF12409_high_6
Description: NF12409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12409_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 61 - 333
Target Start/End: Complemental strand, 36522048 - 36521776
Alignment:
| Q |
61 |
tggtcactattcaatggccatttggttagttagaagttagaaaaagtgatatactatagtactatttctcctattaaaatgtcaatgatttgctcaatag |
160 |
Q |
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| T |
36522048 |
tggtcactattcaatggccatttggttagttagaagttagaaaaagtgatatactatagtactatttctcctattaaaatgtcaatgatttgctcaatag |
36521949 |
T |
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| Q |
161 |
gtgtcatgaagnnnnnnncaaatattctaataatgtcatgaaagaaagttaattgtaattcaaataattcttctcattggagcatagtcaagatatacac |
260 |
Q |
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| T |
36521948 |
gtgtcatgaagaaaaaaacaaatattctaataatgtcatgaaagaaagttaattgtaattcaaataattcttctcattggagcatagtcaagatatacac |
36521849 |
T |
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| Q |
261 |
taattgatacattgaatgttcaataatggtggtttgatgatagtgatttgataattataagacagattctatt |
333 |
Q |
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| T |
36521848 |
taattgatacattgaatgttcaataatggtggtttgatgatagtgatttgataattataagacagattctatt |
36521776 |
T |
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