View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1240_low_45 (Length: 319)
Name: NF1240_low_45
Description: NF1240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1240_low_45 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 12121807 - 12121589
Alignment:
| Q |
5 |
tttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaatgat |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12121807 |
tttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatctggagttgtaaactttctcaatgat |
12121708 |
T |
 |
| Q |
105 |
ggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttctaccacatgct |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12121707 |
ggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgcatttttctaccacatgct |
12121608 |
T |
 |
| Q |
204 |
tcactcccatctctgtgac |
222 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12121607 |
tcactcccatctctgtgac |
12121589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1508357 - 1508133
Alignment:
| Q |
1 |
cacttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||| | | | |||||||||||| | |||| |||| | |||||||| |
|
|
| T |
1508357 |
cacttttagaatactagcaaacaatgcatccttgacgtgataagtgttccatctctctatcgctgaaacgataaccaagaggaattgttatttttctcaa |
1508258 |
T |
 |
| Q |
101 |
tgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttctaccaca |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | | || | | ||| ||||||||||| ||||||||||||||||||||| |||||| | || |
|
|
| T |
1508257 |
cgatggccttgaaaatatcaatgaggcaagaacatcaccacgtaccttaggaccatatttcaaattgatctctcttagttgtgtgcatttttctagcgca |
1508158 |
T |
 |
| Q |
200 |
tgcttcactcccatctctgtgactg |
224 |
Q |
| |
|
||||||||||||||||| ||||||| |
|
|
| T |
1508157 |
tgcttcactcccatctcggtgactg |
1508133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1513758 - 1513536
Alignment:
| Q |
1 |
cacttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||| | ||||| |||||| || |||| | |||||||| || |
|
|
| T |
1513758 |
cacttttagaatactagcaaacaatgcatccttgaagtgataagagctccatctctctgtcgctgaaatgataaccatatggaggttataactttcttaa |
1513659 |
T |
 |
| Q |
101 |
tgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttctaccaca |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||| ||||||||| ||||||||||| |||||| |||| |
|
|
| T |
1513658 |
cgatggccttgaaaatatcaatgaggcaagaacatcaccattcactttagaacaatatttcaaattgatctctctcagttgtgtgcatttttctagcaca |
1513559 |
T |
 |
| Q |
200 |
tgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
1513558 |
agcttcactcccatctctgtgac |
1513536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1489715 - 1489493
Alignment:
| Q |
1 |
cacttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||| | |||| ||||| || ||||||| |||||||| || |
|
|
| T |
1489715 |
cacttttagaatactagcaaacaatgcatccttgaagtgataagagctccatctctctgtcgctgaattgataatcatatggagttgataactttcttaa |
1489616 |
T |
 |
| Q |
101 |
tgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttctaccaca |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||||||||||||||| ||| |||||| |||| |
|
|
| T |
1489615 |
cgatggccttgaaaatatcaatgaggcaagaacatcatcatgcacttgaccacacattttcaaattgatctctcttagttgtgcgcatttttctagcaca |
1489516 |
T |
 |
| Q |
200 |
tgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
1489515 |
tgcttcactcccttctctgtgac |
1489493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1538121 - 1537899
Alignment:
| Q |
1 |
cacttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaa |
100 |
Q |
| |
|
|||| |||||| |||||||||||||||| ||||||||||||||||||||||| || ||| | |||||||||||| || |||| ||| |||||||| || |
|
|
| T |
1538121 |
cactcttagaaaactagcaaacaatgcatccttgacgtgataagagttccatttctctgtcgctgaaacgataaccatatggagatgttaactttcttaa |
1538022 |
T |
 |
| Q |
101 |
tgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttctaccaca |
199 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| || |||||||| ||| |||||||| ||||||||||||||| ||||| |||||| |||| |
|
|
| T |
1538021 |
cgatggccttgaaaatatcaatgaggtaagaacatcatcatccacttgaacacaccttttcaaattgatctctcttagttgagtgcatttttctagcaca |
1537922 |
T |
 |
| Q |
200 |
tgcttcactcccatctctgtgac |
222 |
Q |
| |
|
| |||||||||| ||| |||||| |
|
|
| T |
1537921 |
tacttcactcccttctgtgtgac |
1537899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 40 - 222
Target Start/End: Complemental strand, 1534306 - 1534123
Alignment:
| Q |
40 |
ataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaatgatggccttgaaaatatcaatgaggcaagaacatcaca |
139 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||| |||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1534306 |
ataagagttccatctccttgtcgctgaaacgataacgatctggagttgttacatttttcaatgatggccttgacaatatcaatgaggcaagaacatcact |
1534207 |
T |
 |
| Q |
140 |
atgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgcactt-tctaccacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
| ||| | | ||||||| |||||||||||||| |||||||| || || |||||||||||||| |||||| |||||||||| |
|
|
| T |
1534206 |
tttcacattacaacaatatatcaaatcgatctcttgtagttgtgcacagttctctaccacatgcttaactcccttctctgtgac |
1534123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 1517850 - 1517716
Alignment:
| Q |
4 |
ttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaatga |
103 |
Q |
| |
|
|||||||||||||| ||||| | || ||||| || |||| |||||||||||||||| | ||||||||||| |||| |||||||| | ||| ||||||| |
|
|
| T |
1517850 |
ttttagaatactagtaaacattacatccttggcgcaataaaagttccatctccttgtcgctgaaacgataatgatctggagttgttacatttttcaatga |
1517751 |
T |
 |
| Q |
104 |
tggccttgaaaatatcaatgaggcaagaacatcac |
138 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||| |
|
|
| T |
1517750 |
tggccttgacaatatcaatgagacaagaacatcac |
1517716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 1496270 - 1496136
Alignment:
| Q |
4 |
ttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaatga |
103 |
Q |
| |
|
||||||| |||||| ||||| | || ||||| || ||||||||||||||||||||| |||||| ||||||||| |||||||| | ||| |||| || |
|
|
| T |
1496270 |
ttttagattactagtaaacattacatccttggcgcaataagagttccatctccttgtcgttgaatggataacgatgtggagttgttacatttttcaacga |
1496171 |
T |
 |
| Q |
104 |
tggccttgaaaatatcaatgaggcaagaacatcac |
138 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||| |
|
|
| T |
1496170 |
tggccttgacaatatcaatgagacaagaacatcac |
1496136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 1553033 - 1552902
Alignment:
| Q |
92 |
ctttctcaatgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgc-actt |
190 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||| ||||||| || ||||| ||||||| |||||||| ||||||||||||||| || | || |
|
|
| T |
1553033 |
ctttctcaatgatggccttgaaaataccaatgaagcaacaacatcatgatccactttaagacaacctttcaaattgatctctcttagttgcaagcaattt |
1552934 |
T |
 |
| Q |
191 |
tctaccacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
||| | ||||||||||||||| |||| ||||| |
|
|
| T |
1552933 |
tctccgacatgcttcactcccttctcggtgac |
1552902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 558243 - 558386
Alignment:
| Q |
1 |
cacttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaa |
100 |
Q |
| |
|
|||||||||| |||||||| ||||||| |||| ||| ||||||| |||||||| ||| | |||||||| || ||| |||||||| ||||||||||| |
|
|
| T |
558243 |
cacttttagattactagcagccaatgcatcctttacgcaataagagctccatctctctgtcgctgaaacgacaaggatatggagttgttaactttctcaa |
558342 |
T |
 |
| Q |
101 |
tgatggccttgaaaatatcaatgaggcaagaacatcacaatgca |
144 |
Q |
| |
|
|||||| ||||||| ||| |||||| ||||| ||| || ||||| |
|
|
| T |
558343 |
tgatggtcttgaaagtattaatgagacaagatcatgaccatgca |
558386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 55505368 - 55505237
Alignment:
| Q |
92 |
ctttctcaatgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| ||| |||| | |||||||| | |||| ||||| | ||||||||||||||||||||| || |
|
|
| T |
55505368 |
ctttctcaatgatggccttgaaaataccattgagtcaacaacactagtatgcactttatcacaaccgttcaagttgatctctcttagttgtgtgcagttt |
55505269 |
T |
 |
| Q |
191 |
tctaccacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||| ||| || ||||||||| |||||||||| |
|
|
| T |
55505268 |
tctaacacgtgtttcactcccttctctgtgac |
55505237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 1548775 - 1548624
Alignment:
| Q |
4 |
ttttagaatactagcaaacaatgcaaccttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttctcaatga |
103 |
Q |
| |
|
|||| |||||||||||||||| || |||||| | || |||||||||||||| ||| | ||| || || || | |||||||| | |||||||||||| |
|
|
| T |
1548775 |
ttttcgaatactagcaaacaagacatccttgatgcgagaagagttccatctcagtgtcactaaaatgacaaagagctggagttgttatctttctcaatga |
1548676 |
T |
 |
| Q |
104 |
tggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaa |
155 |
Q |
| |
|
||| |||||||||| |||||| || | ||||||| ||||| ||||| |||| |
|
|
| T |
1548675 |
tggtcttgaaaataccaatgaagcgacaacatcatcatgcaattgaaaacaa |
1548624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 553384 - 553434
Alignment:
| Q |
161 |
caaatcgatctctcttagttgtgtgca-ctttctaccacatgcttcactcc |
210 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||| |||||||| |
|
|
| T |
553384 |
caaatcgatctctctaagttgtgtgcagttttctaccacatgattcactcc |
553434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 546819 - 546880
Alignment:
| Q |
162 |
aaatcgatctctcttagttgtgtgca-ctttctaccacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||| |||||||||||||| |||||| |||||| |||||| ||||||||| |||||||||| |
|
|
| T |
546819 |
aaattgatctctcttagttttgtgcagttttctagcacatgtttcactcccttctctgtgac |
546880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 644734 - 644786
Alignment:
| Q |
159 |
ttcaaatcgatctctcttagttgtgtgca-ctttctaccacatgcttcactcc |
210 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||| |||||||| |||||||| |
|
|
| T |
644734 |
ttcaaatcgatctctctcagttgtgtgcatttttcaaccacatgtttcactcc |
644786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1530137 - 1530097
Alignment:
| Q |
1 |
cacttttagaatactagcaaacaatgcaaccttgacgtgat |
41 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
1530137 |
cacttttagaatactaggaaacaatgcatccttgacatgat |
1530097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 44575853 - 44575643
Alignment:
| Q |
4 |
ttttagaatactagcaaacaatgcaacc-------ttgacgtgataagagttccatctccttgttgttgaaacgataacgatcaggagttgtaaactttc |
96 |
Q |
| |
|
|||| |||||||||||||||||||| || |||||| ||||||||||||||||| | || ||||| || ||||| ||| |||| ||||||| |
|
|
| T |
44575853 |
ttttcgaatactagcaaacaatgcatcccttgacgttgacgcgataagagttccatctcttggtcactgaaatcatcacgatatggaattgttaactttc |
44575754 |
T |
 |
| Q |
97 |
tcaatgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttctac |
195 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| |||||| | | ||||| | |||||| || |||||| |||||||||| ||||||| |
|
|
| T |
44575753 |
tcaatgatggccttgaaagtatcaacgaggcaagaacatcacgatgcacattatcacaatttctcaaattgagctctctcggttgtgtgcagttttctac |
44575654 |
T |
 |
| Q |
196 |
cacatgcttca |
206 |
Q |
| |
|
|||||| |||| |
|
|
| T |
44575653 |
cacatgattca |
44575643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 45245348 - 45245217
Alignment:
| Q |
92 |
ctttctcaatgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgcacttt |
191 |
Q |
| |
|
|||| |||| |||||||||||||||| || ||| ||| ||||| | ||||||||||| || | |||||| ||||||| | ||||||||||| ||| |
|
|
| T |
45245348 |
ctttttcaacgatggccttgaaaataccatcgagacaataacattagcatgcacttgaaagcagtgcctcaaattgatctctgtaagttgtgtgcaattt |
45245249 |
T |
 |
| Q |
192 |
-ctaccacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||||||||| ||||||||| | |||||||| |
|
|
| T |
45245248 |
tctaccacatgtttcactcccttatctgtgac |
45245217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 222
Target Start/End: Complemental strand, 51114041 - 51113913
Alignment:
| Q |
95 |
tctcaatgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgca-ctttct |
193 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| || || | |||||||| || |||| || |||| ||||||||||||| |||||| ||||| |
|
|
| T |
51114041 |
tctcaatgatggccttgaaaatatcattgaggcaacaaaattagcatgcactttaaaacaaccctttaaattaatctctcttagttttgtgcatttttct |
51113942 |
T |
 |
| Q |
194 |
accacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||||||||||||||||| |||||||||| |
|
|
| T |
51113941 |
accacatgcttcactcccttctctgtgac |
51113913 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 514991 - 514861
Alignment:
| Q |
92 |
ctttctcaatgatggccttgaaaatatcaatgaggcaagaacatcacaatgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgcacttt |
191 |
Q |
| |
|
|||||||||||||||||||||||||| || || ||||| ||||| | ||||||||| | |||| | | |||| ||||||||| ||| ||||||| ||| |
|
|
| T |
514991 |
ctttctcaatgatggccttgaaaataccattggggcaacaacattataatgcactttattacaacctcttaaattgatctctctcagtcgtgtgcagttt |
514892 |
T |
 |
| Q |
192 |
ct-accacatgcttcactcccatctctgtga |
221 |
Q |
| |
|
| |||||||||||||||||| ||||||||| |
|
|
| T |
514891 |
ttcaccacatgcttcactcccgtctctgtga |
514861 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 28934933 - 28935004
Alignment:
| Q |
140 |
atgcacttgaagacaatatttcaaatcgatctctcttagttgtgtgc-actttctaccacatgcttcactcc |
210 |
Q |
| |
|
|||||||| || ||||| | ||||| |||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
28934933 |
atgcactttaacacaatcatccaaatagatctctcttagttgtgtgcaattttctaccacatgcttcactcc |
28935004 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 6415880 - 6415933
Alignment:
| Q |
170 |
ctctcttagttgtgtgcactt-tctaccacatgcttcactcccatctctgtgac |
222 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| |||||||||| |||||||| |
|
|
| T |
6415880 |
ctctcttagttgtgtgcagttctctaccacatgtttcactcccacttctgtgac |
6415933 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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