View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1240_low_57 (Length: 292)

Name: NF1240_low_57
Description: NF1240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1240_low_57
NF1240_low_57
[»] chr3 (78 HSPs)
chr3 (161-287)||(47451470-47451596)
chr3 (32-134)||(324303-324405)
chr3 (32-134)||(52989672-52989774)
chr3 (32-140)||(54876337-54876445)
chr3 (32-134)||(14966237-14966339)
chr3 (34-135)||(12339773-12339874)
chr3 (34-130)||(10542384-10542480)
chr3 (34-134)||(14179439-14179539)
chr3 (34-130)||(14670995-14671091)
chr3 (34-134)||(43889578-43889678)
chr3 (32-135)||(5223371-5223474)
chr3 (32-134)||(21837493-21837594)
chr3 (34-134)||(12469969-12470069)
chr3 (34-130)||(14682494-14682590)
chr3 (32-140)||(16643234-16643342)
chr3 (34-134)||(16796554-16796654)
chr3 (32-135)||(15465142-15465245)
chr3 (34-134)||(18700259-18700359)
chr3 (32-134)||(17691659-17691760)
chr3 (32-117)||(50242985-50243070)
chr3 (32-130)||(14763676-14763774)
chr3 (32-130)||(23371422-23371520)
chr3 (32-130)||(51300634-51300732)
chr3 (32-117)||(43550392-43550477)
chr3 (32-107)||(44494901-44494976)
chr3 (48-130)||(10834069-10834151)
chr3 (32-125)||(9577700-9577793)
chr3 (32-140)||(28194754-28194863)
chr3 (32-148)||(37427769-37427885)
chr3 (64-137)||(3264997-3265070)
chr3 (69-134)||(11914003-11914068)
chr3 (64-137)||(36527809-36527882)
chr3 (32-119)||(316202-316290)
chr3 (35-128)||(15246093-15246187)
chr3 (35-128)||(15265214-15265308)
chr3 (37-125)||(13919408-13919495)
chr3 (32-122)||(23318665-23318754)
chr3 (43-127)||(8928390-8928474)
chr3 (35-107)||(15207032-15207105)
chr3 (43-127)||(34852617-34852701)
chr3 (33-124)||(32402910-32403002)
chr3 (59-120)||(38311759-38311820)
chr3 (32-123)||(12378003-12378093)
chr3 (42-128)||(14568921-14569007)
chr3 (84-135)||(15964944-15964995)
chr3 (84-135)||(15968868-15968919)
chr3 (84-135)||(15972792-15972843)
chr3 (59-120)||(20248741-20248803)
chr3 (84-135)||(11854708-11854759)
chr3 (84-131)||(19775744-19775791)
chr3 (32-82)||(9533416-9533466)
chr3 (215-287)||(11015115-11015187)
chr3 (84-148)||(15617336-15617400)
chr3 (84-148)||(30065908-30065972)
chr3 (84-135)||(4107480-4107531)
chr3 (84-135)||(4111332-4111383)
chr3 (84-135)||(7109673-7109724)
chr3 (84-135)||(7113608-7113659)
chr3 (84-135)||(11070043-11070094)
chr3 (84-135)||(11165612-11165663)
chr3 (84-135)||(22321639-22321690)
chr3 (84-135)||(22336694-22336745)
chr3 (84-135)||(27409727-27409778)
chr3 (84-135)||(28949699-28949750)
chr3 (84-135)||(37439719-37439770)
chr3 (84-135)||(55022842-55022893)
chr3 (221-287)||(11024133-11024199)
chr3 (90-135)||(4588862-4588907)
chr3 (88-125)||(54520977-54521014)
chr3 (35-118)||(2051151-2051235)
chr3 (215-287)||(11005552-11005624)
chr3 (49-129)||(43926034-43926114)
chr3 (88-117)||(12567723-12567752)
chr3 (88-117)||(13544188-13544217)
chr3 (54-127)||(14647688-14647760)
chr3 (88-125)||(29544812-29544849)
chr3 (103-135)||(11300532-11300564)
chr3 (35-118)||(52523679-52523763)
[»] scaffold0156 (1 HSPs)
scaffold0156 (32-136)||(15809-15913)
[»] chr7 (80 HSPs)
chr7 (32-134)||(46580625-46580727)
chr7 (32-137)||(32301353-32301458)
chr7 (32-134)||(14273583-14273685)
chr7 (34-134)||(16460717-16460817)
chr7 (35-130)||(16998665-16998760)
chr7 (32-140)||(14157054-14157162)
chr7 (34-134)||(14258519-14258619)
chr7 (34-134)||(16579827-16579927)
chr7 (34-134)||(16585736-16585836)
chr7 (32-135)||(1858781-1858884)
chr7 (32-137)||(10501373-10501478)
chr7 (34-130)||(20487614-20487710)
chr7 (32-130)||(11661345-11661443)
chr7 (32-137)||(16008610-16008715)
chr7 (32-135)||(25927201-25927301)
chr7 (32-137)||(42462015-42462120)
chr7 (32-135)||(13918475-13918578)
chr7 (32-130)||(14566241-14566339)
chr7 (32-130)||(18872399-18872497)
chr7 (32-130)||(38519445-38519543)
chr7 (32-117)||(13647492-13647577)
chr7 (32-130)||(18607526-18607624)
chr7 (32-137)||(20619446-20619552)
chr7 (32-117)||(9177615-9177700)
chr7 (32-126)||(11768868-11768964)
chr7 (58-134)||(15720064-15720140)
chr7 (32-128)||(17017417-17017513)
chr7 (35-137)||(9033298-9033401)
chr7 (32-130)||(11525513-11525612)
chr7 (32-130)||(14422023-14422122)
chr7 (32-119)||(14929170-14929257)
chr7 (32-119)||(15352636-15352723)
chr7 (32-130)||(17060373-17060472)
chr7 (32-129)||(130766-130864)
chr7 (32-130)||(16996295-16996392)
chr7 (69-134)||(8940318-8940383)
chr7 (43-127)||(837317-837401)
chr7 (43-127)||(1202497-1202581)
chr7 (43-127)||(16109474-16109558)
chr7 (69-129)||(38898181-38898241)
chr7 (43-127)||(833321-833405)
chr7 (43-127)||(1198501-1198585)
chr7 (32-93)||(9725609-9725670)
chr7 (59-120)||(10896687-10896748)
chr7 (59-120)||(15167285-15167346)
chr7 (48-119)||(48991266-48991337)
chr7 (50-129)||(18203887-18203965)
chr7 (84-135)||(45170089-45170140)
chr7 (54-127)||(38828304-38828377)
chr7 (32-81)||(2530003-2530052)
chr7 (69-117)||(15081900-15081948)
chr7 (84-135)||(18279375-18279426)
chr7 (84-135)||(18283338-18283389)
chr7 (87-137)||(8468783-8468833)
chr7 (35-117)||(16091844-16091925)
chr7 (88-137)||(14270032-14270081)
chr7 (84-135)||(33079-33130)
chr7 (84-135)||(70848-70899)
chr7 (84-135)||(74957-75008)
chr7 (84-135)||(12704742-12704793)
chr7 (84-135)||(12714836-12714887)
chr7 (84-135)||(12718640-12718691)
chr7 (84-135)||(12723551-12723602)
chr7 (35-118)||(15008451-15008533)
chr7 (84-135)||(16907284-16907335)
chr7 (84-135)||(26292367-26292418)
chr7 (84-135)||(39722238-39722289)
chr7 (35-129)||(1867947-1868040)
chr7 (54-127)||(13892670-13892742)
chr7 (35-118)||(20220142-20220222)
chr7 (84-128)||(16114220-16114264)
chr7 (84-128)||(16117373-16117417)
chr7 (33-83)||(147704-147754)
chr7 (88-125)||(11303402-11303439)
chr7 (100-137)||(15113009-15113046)
chr7 (88-125)||(16108659-16108696)
chr7 (88-125)||(23664923-23664960)
chr7 (88-125)||(29796763-29796800)
chr7 (88-125)||(29800582-29800619)
chr7 (54-127)||(34957416-34957488)
[»] chr4 (71 HSPs)
chr4 (32-134)||(10056707-10056809)
chr4 (34-134)||(17048086-17048186)
chr4 (32-130)||(18212805-18212903)
chr4 (32-128)||(16043087-16043183)
chr4 (32-117)||(51463782-51463867)
chr4 (32-130)||(13591876-13591974)
chr4 (32-130)||(24047249-24047347)
chr4 (32-130)||(32306945-32307043)
chr4 (32-117)||(23803179-23803264)
chr4 (32-130)||(14852825-14852924)
chr4 (32-129)||(26050425-26050521)
chr4 (44-148)||(40907126-40907230)
chr4 (32-117)||(12611106-12611188)
chr4 (32-109)||(630618-630695)
chr4 (32-148)||(40906969-40907084)
chr4 (32-130)||(15041911-15042010)
chr4 (32-130)||(15112414-15112513)
chr4 (69-134)||(14746570-14746635)
chr4 (32-119)||(14825551-14825639)
chr4 (161-287)||(45365790-45365916)
chr4 (35-119)||(15791857-15791942)
chr4 (32-129)||(17333352-17333451)
chr4 (43-127)||(4831496-4831580)
chr4 (43-127)||(4834791-4834875)
chr4 (43-127)||(14047715-14047799)
chr4 (35-99)||(26789441-26789506)
chr4 (70-137)||(14185045-14185112)
chr4 (43-136)||(30146453-30146546)
chr4 (201-287)||(49043778-49043864)
chr4 (56-129)||(26045268-26045340)
chr4 (211-287)||(49038498-49038574)
chr4 (213-287)||(7790445-7790519)
chr4 (161-287)||(7908667-7908793)
chr4 (84-135)||(12487683-12487734)
chr4 (84-135)||(14954250-14954301)
chr4 (84-135)||(25689842-25689893)
chr4 (84-135)||(27533998-27534049)
chr4 (160-283)||(48870929-48871052)
chr4 (160-283)||(48876233-48876356)
chr4 (161-287)||(48899105-48899231)
chr4 (90-135)||(10712828-10712873)
chr4 (90-135)||(10926598-10926643)
chr4 (88-140)||(19857584-19857636)
chr4 (211-287)||(48147333-48147409)
chr4 (215-283)||(48886615-48886683)
chr4 (213-287)||(7771760-7771834)
chr4 (221-287)||(7813842-7813908)
chr4 (161-287)||(48155999-48156125)
chr4 (221-287)||(48864400-48864466)
chr4 (161-287)||(45384460-45384588)
chr4 (88-125)||(49547744-49547781)
chr4 (84-135)||(4561417-4561468)
chr4 (84-135)||(5757021-5757072)
chr4 (84-135)||(9556502-9556553)
chr4 (84-135)||(14757505-14757556)
chr4 (84-135)||(33742350-33742401)
chr4 (213-287)||(7773447-7773521)
chr4 (221-287)||(7801002-7801068)
chr4 (213-287)||(7878748-7878822)
chr4 (88-130)||(15497041-15497083)
chr4 (213-287)||(45371696-45371770)
chr4 (161-287)||(48853046-48853172)
chr4 (88-125)||(14048732-14048769)
chr4 (88-125)||(36038025-36038062)
chr4 (88-137)||(52873148-52873197)
chr4 (84-128)||(17810251-17810295)
chr4 (161-287)||(7237313-7237439)
chr4 (230-287)||(7766007-7766064)
chr4 (230-287)||(7786829-7786886)
chr4 (88-125)||(15534336-15534373)
chr4 (35-118)||(52243146-52243230)
[»] chr8 (55 HSPs)
chr8 (32-140)||(19808312-19808420)
chr8 (32-136)||(22237969-22238073)
chr8 (34-135)||(25363154-25363255)
chr8 (32-136)||(17461002-17461106)
chr8 (32-130)||(23659480-23659578)
chr8 (32-135)||(14397812-14397915)
chr8 (32-130)||(37515778-37515876)
chr8 (32-117)||(25484189-25484274)
chr8 (32-130)||(17086103-17086201)
chr8 (32-128)||(16799561-16799658)
chr8 (32-137)||(17438166-17438272)
chr8 (32-128)||(23943943-23944039)
chr8 (44-130)||(20502063-20502149)
chr8 (68-134)||(23409864-23409930)
chr8 (35-119)||(22995927-22996011)
chr8 (32-130)||(5083103-5083202)
chr8 (32-130)||(18833635-18833733)
chr8 (32-126)||(23667885-23667980)
chr8 (35-120)||(14103177-14103262)
chr8 (32-127)||(22253115-22253210)
chr8 (35-129)||(19154838-19154932)
chr8 (32-129)||(20533358-20533455)
chr8 (34-130)||(22963364-22963461)
chr8 (58-130)||(23914110-23914183)
chr8 (34-88)||(21346185-21346239)
chr8 (59-120)||(44476753-44476814)
chr8 (59-120)||(44480015-44480076)
chr8 (69-134)||(16401983-16402054)
chr8 (69-117)||(19936956-19937004)
chr8 (35-118)||(17439458-17439541)
chr8 (84-135)||(18862728-18862779)
chr8 (84-135)||(21410922-21410973)
chr8 (84-135)||(21805414-21805465)
chr8 (84-135)||(21828097-21828148)
chr8 (35-117)||(28397635-28397717)
chr8 (51-125)||(35026831-35026903)
chr8 (35-118)||(37116434-37116517)
chr8 (35-125)||(22419367-22419455)
chr8 (48-117)||(2418839-2418906)
chr8 (59-120)||(8728620-8728682)
chr8 (220-287)||(15349248-15349315)
chr8 (84-135)||(19278366-19278417)
chr8 (84-135)||(21972668-21972719)
chr8 (84-135)||(21976753-21976804)
chr8 (32-83)||(27941604-27941655)
chr8 (84-135)||(43251785-43251836)
chr8 (88-130)||(1327013-1327055)
chr8 (62-103)||(21346241-21346282)
chr8 (35-118)||(17266945-17267028)
chr8 (32-118)||(40492802-40492887)
chr8 (51-92)||(18024465-18024506)
chr8 (54-127)||(21329104-21329176)
chr8 (54-127)||(21967540-21967612)
chr8 (49-118)||(22364748-22364816)
chr8 (54-127)||(34950622-34950694)
[»] scaffold0020 (2 HSPs)
scaffold0020 (35-134)||(169702-169801)
scaffold0020 (32-130)||(142654-142753)
[»] scaffold0290 (1 HSPs)
scaffold0290 (32-137)||(225-330)
[»] scaffold0076 (1 HSPs)
scaffold0076 (32-137)||(24547-24652)
[»] chr5 (40 HSPs)
chr5 (32-133)||(30138878-30138979)
chr5 (34-130)||(22107386-22107482)
chr5 (32-130)||(6765901-6765999)
chr5 (32-137)||(42960608-42960713)
chr5 (32-130)||(37598832-37598930)
chr5 (32-130)||(28370971-28371069)
chr5 (32-130)||(23469876-23469973)
chr5 (32-130)||(25576805-25576902)
chr5 (32-130)||(25574419-25574516)
chr5 (32-130)||(25575612-25575709)
chr5 (35-119)||(21328168-21328252)
chr5 (59-130)||(22336640-22336711)
chr5 (59-130)||(22340178-22340249)
chr5 (32-130)||(21809531-21809629)
chr5 (34-93)||(33895607-33895666)
chr5 (36-130)||(26732787-26732880)
chr5 (36-130)||(26740600-26740693)
chr5 (76-135)||(18356264-18356323)
chr5 (48-130)||(21731426-21731509)
chr5 (46-129)||(27988892-27988978)
chr5 (43-127)||(10816478-10816562)
chr5 (59-120)||(22750264-22750325)
chr5 (43-127)||(23538504-23538588)
chr5 (76-135)||(20910910-20910969)
chr5 (59-120)||(19511516-19511577)
chr5 (30-129)||(15796494-15796594)
chr5 (84-137)||(10753334-10753387)
chr5 (215-287)||(9120128-9120200)
chr5 (84-135)||(15236863-15236914)
chr5 (84-135)||(19472803-19472854)
chr5 (84-135)||(20295819-20295870)
chr5 (84-135)||(40723670-40723721)
chr5 (35-129)||(22178172-22178266)
chr5 (90-135)||(15236924-15236969)
chr5 (45-129)||(29448078-29448162)
chr5 (199-287)||(29688494-29688582)
chr5 (161-286)||(42561906-42562028)
chr5 (88-125)||(9776513-9776550)
chr5 (247-287)||(179423-179463)
chr5 (32-64)||(20572025-20572057)
[»] chr2 (44 HSPs)
chr2 (32-140)||(27472482-27472590)
chr2 (33-130)||(34874163-34874260)
chr2 (35-134)||(21081689-21081788)
chr2 (32-135)||(31345184-31345287)
chr2 (36-134)||(23069237-23069335)
chr2 (31-137)||(34137006-34137112)
chr2 (32-130)||(9241999-9242097)
chr2 (32-130)||(18358683-18358781)
chr2 (32-130)||(19662370-19662468)
chr2 (34-130)||(9784754-9784848)
chr2 (32-117)||(22173743-22173828)
chr2 (32-130)||(21073442-21073540)
chr2 (32-139)||(21237816-21237924)
chr2 (32-137)||(19201924-19202030)
chr2 (32-130)||(30643996-30644094)
chr2 (32-130)||(6261093-6261192)
chr2 (69-134)||(23707275-23707340)
chr2 (69-134)||(24918179-24918244)
chr2 (32-129)||(23287438-23287534)
chr2 (69-134)||(24681483-24681548)
chr2 (69-133)||(24671065-24671129)
chr2 (42-130)||(26392455-26392542)
chr2 (32-128)||(18546894-18546991)
chr2 (43-127)||(22703174-22703258)
chr2 (59-120)||(6482838-6482899)
chr2 (59-120)||(6486305-6486366)
chr2 (84-135)||(1283361-1283412)
chr2 (84-135)||(30345074-30345125)
chr2 (84-135)||(41531087-41531138)
chr2 (43-127)||(13101597-13101682)
chr2 (35-119)||(43947324-43947408)
chr2 (69-117)||(24642807-24642855)
chr2 (44-118)||(23004835-23004909)
chr2 (84-135)||(12901595-12901646)
chr2 (35-118)||(20520145-20520227)
chr2 (84-135)||(24628562-24628613)
chr2 (84-135)||(24649329-24649380)
chr2 (84-135)||(27379516-27379567)
chr2 (84-135)||(27383562-27383613)
chr2 (84-135)||(27601768-27601819)
chr2 (84-128)||(10101728-10101772)
chr2 (99-137)||(22459579-22459617)
chr2 (88-125)||(10684735-10684772)
chr2 (88-125)||(20261374-20261411)
[»] scaffold0125 (1 HSPs)
scaffold0125 (32-134)||(1824-1926)
[»] scaffold0575 (1 HSPs)
scaffold0575 (34-130)||(6111-6207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-134)||(20819-20919)
[»] scaffold0011 (1 HSPs)
scaffold0011 (34-134)||(126024-126124)
[»] scaffold0117 (1 HSPs)
scaffold0117 (32-135)||(39320-39423)
[»] chr6 (57 HSPs)
chr6 (32-135)||(23414952-23415055)
chr6 (32-130)||(14979337-14979435)
chr6 (34-134)||(19773494-19773594)
chr6 (32-135)||(27556710-27556813)
chr6 (34-136)||(15705395-15705497)
chr6 (32-130)||(25619672-25619770)
chr6 (32-130)||(18453255-18453353)
chr6 (32-130)||(23838247-23838345)
chr6 (32-117)||(20556808-20556893)
chr6 (34-134)||(22806001-22806100)
chr6 (35-134)||(28103851-28103950)
chr6 (32-130)||(4476897-4476995)
chr6 (32-134)||(15817471-15817573)
chr6 (32-117)||(25754972-25755057)
chr6 (32-129)||(33443122-33443216)
chr6 (32-134)||(20136739-20136840)
chr6 (32-134)||(22196029-22196130)
chr6 (42-148)||(23539024-23539130)
chr6 (32-128)||(20224018-20224114)
chr6 (32-128)||(22118002-22118098)
chr6 (32-130)||(20182866-20182962)
chr6 (32-130)||(22153029-22153125)
chr6 (32-122)||(18896265-18896354)
chr6 (32-130)||(16493219-16493317)
chr6 (35-129)||(18177624-18177719)
chr6 (35-129)||(18199368-18199463)
chr6 (35-129)||(18204152-18204247)
chr6 (35-129)||(23076806-23076900)
chr6 (35-129)||(23538884-23538978)
chr6 (32-122)||(19362507-19362596)
chr6 (32-128)||(23528056-23528150)
chr6 (32-81)||(25752838-25752887)
chr6 (43-127)||(29416865-29416949)
chr6 (35-129)||(35008224-35008318)
chr6 (84-140)||(31477893-31477949)
chr6 (84-135)||(16760267-16760318)
chr6 (84-135)||(22949080-22949131)
chr6 (84-135)||(22953036-22953087)
chr6 (84-135)||(23871524-23871575)
chr6 (84-135)||(23875480-23875531)
chr6 (91-135)||(18955853-18955897)
chr6 (43-127)||(25738457-25738540)
chr6 (84-135)||(8243833-8243884)
chr6 (84-135)||(11566834-11566885)
chr6 (84-135)||(12618927-12618978)
chr6 (84-135)||(14472243-14472294)
chr6 (84-135)||(18917349-18917400)
chr6 (84-135)||(19870562-19870613)
chr6 (84-135)||(22862918-22862969)
chr6 (84-135)||(23395040-23395091)
chr6 (84-135)||(23989892-23989943)
chr6 (88-130)||(15875456-15875498)
chr6 (54-127)||(7429918-7429990)
chr6 (212-287)||(21016186-21016261)
chr6 (90-135)||(1644680-1644725)
chr6 (88-125)||(12942356-12942393)
chr6 (54-127)||(14594210-14594282)
[»] scaffold0107 (2 HSPs)
scaffold0107 (32-134)||(10034-10136)
scaffold0107 (32-130)||(36253-36351)
[»] chr1 (39 HSPs)
chr1 (32-130)||(13881331-13881429)
chr1 (32-130)||(27653172-27653270)
chr1 (34-134)||(48603521-48603621)
chr1 (32-130)||(22124358-22124456)
chr1 (32-130)||(20958181-20958279)
chr1 (34-130)||(41781542-41781636)
chr1 (32-140)||(28312577-28312685)
chr1 (32-130)||(21043231-21043329)
chr1 (32-117)||(45574756-45574841)
chr1 (32-128)||(52940827-52940923)
chr1 (32-130)||(20437942-20438041)
chr1 (42-130)||(14800602-14800690)
chr1 (42-130)||(14809476-14809564)
chr1 (32-111)||(22130780-22130858)
chr1 (59-130)||(16372070-16372141)
chr1 (35-128)||(48520586-48520679)
chr1 (36-118)||(21533827-21533908)
chr1 (43-127)||(32649787-32649871)
chr1 (32-97)||(47190707-47190772)
chr1 (42-129)||(16381256-16381346)
chr1 (32-94)||(20329118-20329181)
chr1 (33-95)||(11945564-11945626)
chr1 (45-122)||(635944-636022)
chr1 (54-127)||(2332946-2333019)
chr1 (84-135)||(1925212-1925263)
chr1 (84-135)||(20924226-20924277)
chr1 (84-135)||(23819381-23819432)
chr1 (54-127)||(29534624-29534697)
chr1 (89-140)||(51326855-51326906)
chr1 (84-135)||(1010695-1010746)
chr1 (84-135)||(20228892-20228943)
chr1 (84-135)||(21407327-21407378)
chr1 (35-118)||(41049988-41050070)
chr1 (35-118)||(50614068-50614151)
chr1 (35-118)||(50621896-50621979)
chr1 (88-130)||(43543201-43543243)
chr1 (35-118)||(50686698-50686781)
chr1 (84-135)||(52639513-52639564)
chr1 (84-135)||(16375541-16375593)
[»] scaffold0436 (1 HSPs)
scaffold0436 (32-137)||(8097-8202)
[»] scaffold0200 (1 HSPs)
scaffold0200 (32-135)||(17641-17744)
[»] scaffold0051 (1 HSPs)
scaffold0051 (32-135)||(31191-31294)
[»] scaffold1783 (1 HSPs)
scaffold1783 (32-134)||(486-588)
[»] scaffold0096 (1 HSPs)
scaffold0096 (34-130)||(21239-21335)
[»] scaffold0431 (1 HSPs)
scaffold0431 (47-134)||(15030-15117)
[»] scaffold2080 (1 HSPs)
scaffold2080 (32-130)||(710-808)
[»] scaffold0484 (1 HSPs)
scaffold0484 (34-140)||(915-1021)
[»] scaffold0396 (1 HSPs)
scaffold0396 (32-130)||(1967-2065)
[»] scaffold0034 (1 HSPs)
scaffold0034 (35-137)||(120074-120176)
[»] scaffold0032 (1 HSPs)
scaffold0032 (32-134)||(67330-67431)
[»] scaffold0293 (2 HSPs)
scaffold0293 (34-130)||(17575-17671)
scaffold0293 (32-135)||(20160-20263)
[»] scaffold0292 (1 HSPs)
scaffold0292 (34-130)||(6684-6780)
[»] scaffold0026 (1 HSPs)
scaffold0026 (32-130)||(110726-110824)
[»] scaffold0023 (1 HSPs)
scaffold0023 (32-134)||(105149-105251)
[»] scaffold1439 (1 HSPs)
scaffold1439 (32-117)||(269-354)
[»] scaffold0780 (1 HSPs)
scaffold0780 (32-117)||(3277-3362)
[»] scaffold0394 (1 HSPs)
scaffold0394 (32-117)||(12221-12306)
[»] scaffold0019 (2 HSPs)
scaffold0019 (42-130)||(132989-133077)
scaffold0019 (32-128)||(29285-29372)
[»] scaffold0282 (1 HSPs)
scaffold0282 (32-130)||(18117-18215)
[»] scaffold0010 (1 HSPs)
scaffold0010 (32-137)||(713-818)
[»] scaffold0170 (1 HSPs)
scaffold0170 (32-130)||(3029-3128)
[»] scaffold0077 (1 HSPs)
scaffold0077 (32-130)||(55634-55733)
[»] scaffold1539 (1 HSPs)
scaffold1539 (32-137)||(1004-1110)
[»] scaffold0054 (1 HSPs)
scaffold0054 (32-134)||(75778-75880)
[»] scaffold0012 (2 HSPs)
scaffold0012 (32-130)||(221157-221254)
scaffold0012 (84-135)||(189460-189511)
[»] scaffold0347 (1 HSPs)
scaffold0347 (32-109)||(121-198)
[»] scaffold0037 (2 HSPs)
scaffold0037 (32-117)||(82235-82324)
scaffold0037 (90-135)||(80424-80469)
[»] scaffold0331 (1 HSPs)
scaffold0331 (32-130)||(3940-4039)
[»] scaffold0561 (1 HSPs)
scaffold0561 (35-137)||(10539-10641)
[»] scaffold0485 (1 HSPs)
scaffold0485 (32-130)||(10236-10334)
[»] scaffold0205 (1 HSPs)
scaffold0205 (32-128)||(29747-29844)
[»] scaffold0014 (1 HSPs)
scaffold0014 (32-129)||(206474-206570)
[»] scaffold0040 (2 HSPs)
scaffold0040 (32-148)||(11201-11316)
scaffold0040 (32-148)||(22301-22416)
[»] scaffold0639 (1 HSPs)
scaffold0639 (32-130)||(7438-7537)
[»] scaffold0507 (1 HSPs)
scaffold0507 (32-130)||(2620-2719)
[»] scaffold0337 (1 HSPs)
scaffold0337 (32-127)||(9671-9765)
[»] scaffold0169 (1 HSPs)
scaffold0169 (32-130)||(29373-29472)
[»] scaffold0111 (2 HSPs)
scaffold0111 (32-122)||(7510-7601)
scaffold0111 (32-122)||(14629-14720)
[»] scaffold1419 (1 HSPs)
scaffold1419 (35-125)||(101-191)
[»] scaffold0747 (1 HSPs)
scaffold0747 (69-134)||(628-693)
[»] scaffold0599 (1 HSPs)
scaffold0599 (69-134)||(1279-1344)
[»] scaffold0356 (1 HSPs)
scaffold0356 (35-120)||(614-699)
[»] scaffold0278 (1 HSPs)
scaffold0278 (37-137)||(7900-8000)
[»] scaffold0106 (2 HSPs)
scaffold0106 (69-134)||(15225-15290)
scaffold0106 (35-129)||(19599-19693)
[»] scaffold0741 (1 HSPs)
scaffold0741 (69-137)||(4256-4324)
[»] scaffold0047 (1 HSPs)
scaffold0047 (32-119)||(22361-22449)
[»] scaffold0005 (1 HSPs)
scaffold0005 (32-119)||(14070-14158)
[»] scaffold0914 (1 HSPs)
scaffold0914 (37-119)||(1785-1868)
[»] scaffold0013 (1 HSPs)
scaffold0013 (32-130)||(30404-30503)
[»] scaffold0306 (1 HSPs)
scaffold0306 (69-131)||(15069-15131)
[»] scaffold0081 (1 HSPs)
scaffold0081 (32-138)||(4646-4752)
[»] scaffold0046 (2 HSPs)
scaffold0046 (32-122)||(16868-16957)
scaffold0046 (32-122)||(26028-26117)
[»] scaffold0022 (2 HSPs)
scaffold0022 (69-134)||(53825-53890)
scaffold0022 (35-118)||(128922-129005)
[»] scaffold0790 (1 HSPs)
scaffold0790 (35-122)||(6116-6203)
[»] scaffold0009 (1 HSPs)
scaffold0009 (35-130)||(85618-85713)
[»] scaffold0434 (1 HSPs)
scaffold0434 (73-134)||(6932-6993)
[»] scaffold0317 (1 HSPs)
scaffold0317 (69-134)||(6889-6954)
[»] scaffold0066 (1 HSPs)
scaffold0066 (43-127)||(48403-48487)
[»] scaffold0021 (1 HSPs)
scaffold0021 (43-127)||(146261-146345)
[»] scaffold0708 (1 HSPs)
scaffold0708 (32-100)||(2376-2444)
[»] scaffold0072 (1 HSPs)
scaffold0072 (32-122)||(57898-57987)
[»] scaffold0750 (1 HSPs)
scaffold0750 (32-97)||(3701-3766)
[»] scaffold0004 (1 HSPs)
scaffold0004 (33-95)||(332423-332485)
[»] scaffold0415 (1 HSPs)
scaffold0415 (84-135)||(367-418)
[»] scaffold0229 (1 HSPs)
scaffold0229 (84-135)||(11584-11635)
[»] scaffold0157 (1 HSPs)
scaffold0157 (84-135)||(32743-32794)
[»] scaffold0109 (1 HSPs)
scaffold0109 (84-135)||(36025-36076)
[»] scaffold0031 (1 HSPs)
scaffold0031 (84-135)||(36169-36220)
[»] scaffold0006 (2 HSPs)
scaffold0006 (35-118)||(97092-97175)
scaffold0006 (35-118)||(106370-106453)
[»] scaffold0108 (1 HSPs)
scaffold0108 (75-137)||(3323-3385)
[»] scaffold0544 (1 HSPs)
scaffold0544 (32-83)||(2442-2493)
[»] scaffold0452 (1 HSPs)
scaffold0452 (34-88)||(13450-13502)
[»] scaffold0141 (1 HSPs)
scaffold0141 (84-135)||(14170-14221)
[»] scaffold0028 (1 HSPs)
scaffold0028 (84-135)||(58802-58853)
[»] scaffold0357 (2 HSPs)
scaffold0357 (64-129)||(2737-2802)
scaffold0357 (35-118)||(16052-16136)
[»] scaffold0676 (1 HSPs)
scaffold0676 (84-135)||(422-473)
[»] scaffold0525 (1 HSPs)
scaffold0525 (84-135)||(3958-4009)
[»] scaffold0372 (1 HSPs)
scaffold0372 (84-135)||(5184-5235)
[»] scaffold0349 (1 HSPs)
scaffold0349 (84-135)||(12394-12445)
[»] scaffold0029 (3 HSPs)
scaffold0029 (84-135)||(65611-65662)
scaffold0029 (84-135)||(61695-61746)
scaffold0029 (84-135)||(80687-80738)
[»] scaffold0420 (1 HSPs)
scaffold0420 (35-129)||(6235-6329)
[»] scaffold0139 (1 HSPs)
scaffold0139 (35-129)||(38392-38486)
[»] scaffold0138 (1 HSPs)
scaffold0138 (35-129)||(18190-18284)
[»] scaffold1427 (1 HSPs)
scaffold1427 (88-125)||(1583-1620)
[»] scaffold0422 (1 HSPs)
scaffold0422 (88-125)||(3178-3215)
[»] scaffold0016 (1 HSPs)
scaffold0016 (90-135)||(207591-207636)
[»] scaffold0513 (1 HSPs)
scaffold0513 (89-137)||(10858-10906)
[»] scaffold0123 (1 HSPs)
scaffold0123 (35-97)||(25213-25275)
[»] scaffold0301 (1 HSPs)
scaffold0301 (54-127)||(16541-16613)
[»] scaffold0015 (1 HSPs)
scaffold0015 (54-127)||(209001-209073)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-127)||(163071-163143)


Alignment Details
Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 47451470 - 47451596
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47451470 tccaataatatcaccactttttgtagaggttaaggggtaaaagtactgagagggaatgccatcaataggaagaacaagagtcttttcccaagacgaatta 47451569  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    |||||||||||||||||||||||||||    
T  47451570 actttgtattctttcatcacccatatt 47451596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 324405 - 324303
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  324405 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 324306  T
Q  132 gtg 134  Q
    |||    
T  324305 gtg 324303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 52989672 - 52989774
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52989672 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 52989771  T
Q  132 gtg 134  Q
    |||    
T  52989772 gtg 52989774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 54876337 - 54876445
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54876337 tagtaatgtaatatatttgtatatgcattttgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 54876436  T
Q  132 gtgttgtct 140  Q
    ||| |||||    
T  54876437 gtgctgtct 54876445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 14966339 - 14966237
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14966339 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaaattgatgttgattatcatttgatgttgttatatcttgagatgtttac 14966240  T
Q  132 gtg 134  Q
    |||    
T  14966239 gtg 14966237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 12339874 - 12339773
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  12339874 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 12339775  T
Q  134 gt 135  Q
    ||    
T  12339774 gt 12339773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 10542384 - 10542480
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10542384 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgttta 10542480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 14179539 - 14179439
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  14179539 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 14179440  T
Q  134 g 134  Q
    |    
T  14179439 g 14179439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 14671091 - 14670995
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14671091 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgttta 14670995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 43889578 - 43889678
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  43889578 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 43889677  T
Q  134 g 134  Q
    |    
T  43889678 g 43889678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 5223474 - 5223371
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5223474 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 5223375  T
Q  132 gtgt 135  Q
    ||||    
T  5223374 gtgt 5223371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 21837594 - 21837493
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21837594 tagtaatgtaataaatttgtatatgcatt-tgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 21837496  T
Q  132 gtg 134  Q
    |||    
T  21837495 gtg 21837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 12470069 - 12469969
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  12470069 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgttcacgt 12469970  T
Q  134 g 134  Q
    |    
T  12469969 g 12469969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 14682590 - 14682494
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  14682590 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatcttgttatatcttgagatgttta 14682494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 16643342 - 16643234
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||     
T  16643342 tagtaatgtaatatatttgtatatgcattatgtgaattatataggatgtttaagttgatgttgattatcatttgatgttgttatatctcaagatgtttat 16643243  T
Q  132 gtgttgtct 140  Q
    ||| |||||    
T  16643242 gtgatgtct 16643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 16796654 - 16796554
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  16796654 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgaaatgtttacgt 16796555  T
Q  134 g 134  Q
    |    
T  16796554 g 16796554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 15465245 - 15465142
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15465245 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgcttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 15465146  T
Q  132 gtgt 135  Q
    ||||    
T  15465145 gtgt 15465142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 18700259 - 18700359
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  18700259 gtaatataatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttaattatcatttgatattgttatatcttgagatgtttacgt 18700358  T
Q  134 g 134  Q
    |    
T  18700359 g 18700359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 17691659 - 17691760
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  17691659 tagtaatgtaatatatttgtatatgcattttgtgaattatataagatgtttaagttgatgttgataatcatttgatgttattatatc-tgagatgtttac 17691757  T
Q  132 gtg 134  Q
    |||    
T  17691758 gtg 17691760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 50243070 - 50242985
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50243070 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatgatttgatgttgttatat 50242985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 14763676 - 14763774
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  14763676 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 14763774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 23371422 - 23371520
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  23371422 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 23371520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 51300732 - 51300634
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  51300732 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 51300634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 43550392 - 43550477
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  43550392 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgattatgatttgatgttgttatat 43550477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 44494976 - 44494901
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44494976 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgat 44494901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 10834069 - 10834151
Alignment:
Q  48 ttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10834069 ttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 10834151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 9577793 - 9577700
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  9577793 tagtaatgtgacatatttgtatatgcattatgtgaattatataagatgtttaaggtgttgttgattatcatttgatattgttatatcttgagat 9577700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 28194863 - 28194754
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  28194863 tagtaatgtgatatatttgtatatgcattatgtgaattatataaaatgtttaagttgatgattgattattatttgacattgttatatcttgagatgttta 28194764  T
Q  131 cgtgttgtct 140  Q
     ||| |||||    
T  28194763 tgtgctgtct 28194754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 37427885 - 37427769
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||  |||||||||||||||||||||     
T  37427885 tagtaatgtgatatagttgtatatgcattatgtggattatatatgatgtttaagttgttgatgattatcatttgatactgttatatcttgagatgtttat 37427786  T
Q  132 gtgttgtctgtgctgct 148  Q
    ||| || ||||||||||    
T  37427785 gtgctgcctgtgctgct 37427769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 3264997 - 3265070
Alignment:
Q  64 tgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  3264997 tgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcatgagatgtttatgtgttg 3265070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 11914003 - 11914068
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11914003 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 11914068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 36527882 - 36527809
Alignment:
Q  64 tgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  36527882 tgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatatttatgtgttg 36527809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 316290 - 316202
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  || ||| |||||||||||    
T  316290 tagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgattattcttggatattgttatatct 316202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 15246187 - 15246093
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaatta-tataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||| || |||||    
T  15246187 taatgtgatataattgtatatgcattatgtgaattaatataagatgtttaagttgatgttgattatcctttgatattgttatgtctggatatgtt 15246093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 15265308 - 15265214
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaatta-tataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||| || |||||    
T  15265308 taatgtgatataattgtatatgcattatgtgaattaatataagatgtttaagttgatgttgattatcctttgatattgttatgtctggatatgtt 15265214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 13919495 - 13919408
Alignment:
Q  37 atgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| || ||||  ||||||||||||||||    
T  13919495 atgtaatatatttgtatatgcattatgtgaattatttaagatgtttaag-tgttgttgattattatgtgataatgttatatcttgagat 13919408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 23318665 - 23318754
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| ||| ||||| ||||||||||||||    
T  23318665 tagtaatgtgatataattgtatatgcattatgtgaattatataagttgttcaagttgttgttgattgtca-ttgatattgttatatcttga 23318754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 8928390 - 8928474
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  8928390 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 8928474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 15207105 - 15207032
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaatta-tataagatgtttaagttgatgttgattatcatttgat 107  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  15207105 taatgtgatataattgtatatgcattatgtgaattaatataagatgtttaagttgatgttgattatcctttgat 15207032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 34852617 - 34852701
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34852617 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 34852701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 32402910 - 32403002
Alignment:
Q  33 agtaatgtaatatatttgtatatgcattatgtgaattatataagatgttt-aagttgatgttgattatcatttgatgttgttatatcttgaga 124  Q
    |||||||| ||||| || ||||||||||||||||||||| |||||||||| |||||| | |||||||| ||||||| ||||||||||||||||    
T  32402910 agtaatgtgatatagttttatatgcattatgtgaattatctaagatgtttaaagttgctattgattattatttgatattgttatatcttgaga 32403002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 38311759 - 38311820
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  38311759 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatattgttatatctt 38311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 12378093 - 12378003
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgag 123  Q
    ||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||||||| ||||||||  |||||||| |||||||||| ||||    
T  12378093 tagtaatttaatatatt-gtatatgtattatttgaattatttaagatgtttaagttgttgttgatttgcatttgatattgttatatcatgag 12378003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 14568921 - 14569007
Alignment:
Q  42 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||| |||||||||| |||||||||||||||| |||||||| ||||||||||| | ||| ||||| |||||||||| |||| ||||    
T  14568921 atataattgtatatgcgttatgtgaattatatatgatgtttaggttgatgttgactgtcacttgatattgttatatcatgagctgtt 14569007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 15964995 - 15964944
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15964995 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 15964944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 15968919 - 15968868
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15968919 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 15968868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 15972843 - 15972792
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15972843 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 15972792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 20248741 - 20248803
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  20248741 ttatgtggattatataagatgtttaagttgatgttgaattatcatttgatactgttatatctt 20248803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 11854759 - 11854708
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  11854759 agttgttgttgattattatttgatattgttatatcttgagatgtttacgtgt 11854708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 19775791 - 19775744
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  19775791 agttgttgttgattatcatttgatattgttatatcttgagatgtttac 19775744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 9533466 - 9533416
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttt 82  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  9533466 tagtaatgagatatatttgtatatgcattatgtggattatataagatgttt 9533416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 11015115 - 11015187
Alignment:
Q  215 aatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||| |||||||||| || |||||||| ||  ||||||||||||  ||||||||||||||||| |||||||||    
T  11015115 aatgtcatcaatagataggacaagagttttaacccaagacgaatgcactttgtattctttcataacccatatt 11015187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 15617400 - 15617336
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtctgtgctgct 148  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| |||| | || |||||||    
T  15617400 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgtcgcctatgctgct 15617336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 30065972 - 30065908
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtctgtgctgct 148  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| |||| | || |||||||    
T  30065972 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgtcgcctatgctgct 30065908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 4107480 - 4107531
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  4107480 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 4107531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 4111332 - 4111383
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  4111332 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 4111383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 7109724 - 7109673
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  7109724 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 7109673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 7113659 - 7113608
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  7113659 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 7113608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 11070094 - 11070043
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  11070094 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 11070043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 11165612 - 11165663
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  11165612 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 11165663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 22321690 - 22321639
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  22321690 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 22321639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 22336745 - 22336694
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  22336745 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 22336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 27409727 - 27409778
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27409727 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 27409778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 28949750 - 28949699
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  28949750 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 28949699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 37439719 - 37439770
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||| ||||||| | |||||||||||||||||||||||||    
T  37439719 agttgttgttgattattatttgatatggttatatcttgagatgtttacgtgt 37439770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 55022893 - 55022842
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  55022893 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 55022842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 11024133 - 11024199
Alignment:
Q  221 atcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||||| || |||||||||||   |||||||||||  ||||||||||||||||| |||||||||    
T  11024133 atcaatagataggacaagagtcttagtccaagacgaatgcactttgtattctttcataacccatatt 11024199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 4588862 - 4588907
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||    
T  4588862 tgttgattatcatttgaaattgttatatcttgagatgtttatgtgt 4588907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 54521014 - 54520977
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  54521014 gatgttgattaccatttgatgttgttatatcttgagat 54520977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 2051151 - 2051235
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataag-atgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||| ||||||||||||||  ||||||||||| | |||||| || || ||||||||  |||||||| ||||||||||    
T  2051151 taatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcatttgatattgttatatc 2051235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 11005552 - 11005624
Alignment:
Q  215 aatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||||||||||| |  ||||||| |||   |||||||||||  ||||||||||||||||| |||||||||    
T  11005552 aatgccatcaatagataagacaagagccttagtccaagacgaatgcactttgtattctttcataacccatatt 11005624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 43926114 - 43926034
Alignment:
Q  49 tgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||||||  |||||| |||| ||||||| || || ||||||||  |||||||| |||||||||| |||| |||||    
T  43926114 tgtatatgcattacatgaattgtatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgagctgttt 43926034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 117
Target Start/End: Complemental strand, 12567752 - 12567723
Alignment:
Q  88 gatgttgattatcatttgatgttgttatat 117  Q
    ||||||||||||||||||||||||||||||    
T  12567752 gatgttgattatcatttgatgttgttatat 12567723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 117
Target Start/End: Complemental strand, 13544217 - 13544188
Alignment:
Q  88 gatgttgattatcatttgatgttgttatat 117  Q
    ||||||||||||||||||||||||||||||    
T  13544217 gatgttgattatcatttgatgttgttatat 13544188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 14647688 - 14647760
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | |||||||||||||||| | |||| |||| ||| |||||    
T  14647688 atgcattatgtggattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgggatgt 14647760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 29544812 - 29544849
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  29544812 gatgttgattaccatttgatgttgttatgtcttgagat 29544849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 11300532 - 11300564
Alignment:
Q  103 ttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||||||||||||    
T  11300532 ttgatattgttatatcttgagatgtttacgtgt 11300564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 52523679 - 52523763
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataag-atgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||| ||||||||||||||  ||||||||||| | |||||| || || ||||||||  |||| ||| ||||||||||    
T  52523679 taatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcattcgatattgttatatc 52523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 15913 - 15809
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15913 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 15814  T
Q  132 gtgtt 136  Q
    |||||    
T  15813 gtgtt 15809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 46580625 - 46580727
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46580625 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 46580724  T
Q  132 gtg 134  Q
    |||    
T  46580725 gtg 46580727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 32301458 - 32301353
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32301458 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatctttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 32301359  T
Q  132 gtgttg 137  Q
    ||||||    
T  32301358 gtgttg 32301353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 14273685 - 14273583
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14273685 tagtaatgtaatatatttgtatatgtattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 14273586  T
Q  132 gtg 134  Q
    |||    
T  14273585 gtg 14273583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 16460717 - 16460817
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16460717 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgtttacgt 16460816  T
Q  134 g 134  Q
    |    
T  16460817 g 16460817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 16998760 - 16998665
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16998760 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 16998665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 14157054 - 14157162
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14157054 tagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttat 14157153  T
Q  132 gtgttgtct 140  Q
    |||||||||    
T  14157154 gtgttgtct 14157162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 14258619 - 14258519
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  14258619 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 14258520  T
Q  134 g 134  Q
    |    
T  14258519 g 14258519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 16579927 - 16579827
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  16579927 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgtttttgattatcatttgatgttgttatatcttgagatgtttacgt 16579828  T
Q  134 g 134  Q
    |    
T  16579827 g 16579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 16585736 - 16585836
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  16585736 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgtttttgattatcatttgatgttgttatatcttgagatgtttacgt 16585835  T
Q  134 g 134  Q
    |    
T  16585836 g 16585836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 1858781 - 1858884
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1858781 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 1858880  T
Q  132 gtgt 135  Q
    ||||    
T  1858881 gtgt 1858884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 10501373 - 10501478
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10501373 tagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttat 10501472  T
Q  132 gtgttg 137  Q
    ||||||    
T  10501473 gtgttg 10501478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 20487710 - 20487614
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  20487710 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatgtcttgagatattta 20487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 11661443 - 11661345
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11661443 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 11661345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 16008715 - 16008610
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||     
T  16008715 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgtttat 16008616  T
Q  132 gtgttg 137  Q
    ||||||    
T  16008615 gtgttg 16008610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 25927201 - 25927301
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||| |||||||||||||||||||||||    
T  25927201 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagt---tgttgattatcatttgatattgttatatcttgagatgtttac 25927297  T
Q  132 gtgt 135  Q
    ||||    
T  25927298 gtgt 25927301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 42462120 - 42462015
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  42462120 tagtaatgtgatatagttgtatattcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgtttat 42462021  T
Q  132 gtgttg 137  Q
    ||||||    
T  42462020 gtgttg 42462015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 13918475 - 13918578
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||    
T  13918475 tagtaatgtaatatatttgtatatgcattttgtgaattatatatgatgtttaagttgttgttaattatcatttgatatcgttatatcttgagatgtttac 13918574  T
Q  132 gtgt 135  Q
    ||||    
T  13918575 gtgt 13918578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 14566339 - 14566241
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  14566339 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 14566241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 18872497 - 18872399
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18872497 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 18872399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 38519543 - 38519445
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38519543 tagtaatgtgatatagttgtatatgcattatgtggattgtataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 38519445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 13647577 - 13647492
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  13647577 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgattatgatttgatgttgttatat 13647492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 18607624 - 18607526
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  18607624 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatatttttatatattgagatgttta 18607526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 20619552 - 20619446
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  20619552 tagtaatgtgatatatttgtatatgcattatgtgaattatataatatgcttaagttgatgattgattattatttgacattgttatatcttgagatgttta 20619453  T
Q  131 cgtgttg 137  Q
     ||||||    
T  20619452 tgtgttg 20619446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 9177615 - 9177700
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||    
T  9177615 tagtaatgtaatatatttgtatatgcattatgtgaattatttaagatgtttaagttgttgttgattatcatttgatattattatat 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 11768868 - 11768964
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg--attatcatttgatgttgttatatcttgagatg 126  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||| ||||||||||||||||||    
T  11768868 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgaaaatattatttgatattgttatatcttgagatg 11768964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 15720140 - 15720064
Alignment:
Q  58 attatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15720140 attaagtgaattagataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 15720064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 17017417 - 17017513
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||| |||||||| || |||||    
T  17017417 tagtaatgtaatatatttgtatatgcattatatgaattatttaagatgtttaagttgttgttgattatcacttgatgttattatatctggatatgtt 17017513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 9033298 - 9033401
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||| |||||| |||| ||    
T  9033298 taatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgcattattatttgatattgttatatcctgagatatttatgt 9033397  T
Q  134 gttg 137  Q
    ||||    
T  9033398 gttg 9033401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 11525513 - 11525612
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||    
T  11525513 tagtaatttgatatattggtatatgcattatgtgaattatataagatgtttaagttgatgattgattattatttgatattgttatatcctgagatgttta 11525612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 14422122 - 14422023
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttt-aagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  14422122 tagtaatgagatatatttgtatatgcattatgtggatcatataagatgttttaagttgatgttgattatcatttgatattgttatatcttgaggtgttta 14422023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 14929170 - 14929257
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14929170 tagtaatgtaatatatttggatatgcattatgtgaagtatttaagatgtttaagttgatgttgattatcatttgatattgttgtatct 14929257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 15352636 - 15352723
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15352636 tagtaatgtaatatatttggatatgcattatgtgaagtatttaagatgtttaagttgatgttgattatcatttgatattgttgtatct 15352723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 17060373 - 17060472
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||||| ||||||||||||    
T  17060373 tagtaatgtcaaatatttgtatatgcattatgtgaattatataagatgttttaagttgaagttgattatcgtttgatattgttatattttgagatgttta 17060472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 130766 - 130864
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  130766 tagtaatgtgatatagttgtatatgcattatgtggattatataaggtgtttaagttgatgattgattattatttgatattgttatatcttgagatgttt 130864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 16996392 - 16996295
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||  || |||||||| ||||||||| ||||||||||||||||||||||    
T  16996392 tagtaatgtgatatatttgtatatgcattatgtggattatataagatgtttaa-atgttgttgattttcatttgatattgttatatcttgagatgttta 16996295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 8940383 - 8940318
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8940383 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 8940318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 837317 - 837401
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  837317 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 837401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 1202497 - 1202581
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  1202497 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 1202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 16109474 - 16109558
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  16109474 tatatttgtaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgctatatcttgagatgt 16109558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 38898181 - 38898241
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38898181 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatctagagatgttt 38898241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 833321 - 833405
Alignment:
Q  43 tatatttgtatatgcattatgtgaa-ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  833321 tatatttgcaaatgcattatgtgaaattatatatgatgtttaagttg-tgttgattatcaattgatattgttatatcttgagatgt 833405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 1198501 - 1198585
Alignment:
Q  43 tatatttgtatatgcattatgtgaa-ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  1198501 tatatttgcaaatgcattatgtgaaattatatatgatgtttaagttg-tgttgattatcaattgatattgttatatcttgagatgt 1198585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 9725609 - 9725670
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgtt 93  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9725609 tagtaatgtgatatagttgtatatgcattatgtgaatcatataagatgtttaagttgatgtt 9725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 10896687 - 10896748
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  10896687 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatattgttatatctt 10896748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 15167346 - 15167285
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15167346 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatattgttatatctt 15167285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 48991337 - 48991266
Alignment:
Q  48 ttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||||||||| ||||| || ||||||||    
T  48991337 ttgtatatgcattatctgaattatttaagatgtttaagttgttgttgattatcacttgatattattatatct 48991266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 18203965 - 18203887
Alignment:
Q  50 gtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||||| |||| |||||||| |||| |||||| | |||||||||| ||||||| |||||||||||||||||||||    
T  18203965 gtatatgcattgtgtggattatatatgatgattaagt-gttgttgattattatttgatattgttatatcttgagatgttt 18203887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 45170089 - 45170140
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  45170089 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 45170140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 38828377 - 38828304
Alignment:
Q  54 atgcattatgtgaa-ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| | ||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  38828377 atgcattatgtggacttatataggatgtttaagttg-tgttgattatcatttgatattattatatcttgagatgt 38828304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 2530003 - 2530052
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtt 81  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  2530003 tagtgatgtaatatatttgtatatgcattatgtgaattatttaagatgtt 2530052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 15081900 - 15081948
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  15081900 tatatatgatgtttaagttgatgttgattatgatttgatgttgttatat 15081948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 18279426 - 18279375
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  18279426 agttgttgttgattatcatttgatattgttatatcttgagatgtttatgtgt 18279375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 18283389 - 18283338
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  18283389 agttgttgttgattatcatttgatattgttatatcttgagatgtttatgtgt 18283338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 8468833 - 8468783
Alignment:
Q  87 tgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  8468833 tgatgttgattattatttgatgttgttatatcttgaggtgtttaagtgttg 8468783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 16091925 - 16091844
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||| | ||||||||||| |||||||||| |||||||| |||| ||||| || |||||||||||||||||| || ||||||    
T  16091925 taatgttacatatttgtatacgcattatgtggattatatatgatgattaag-tgttgttgattatcatttgatattattatat 16091844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 14270032 - 14270081
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||    
T  14270032 gatgttgattattatttgatgttgttatatcttgaggtgtttaagtgttg 14270081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 33130 - 33079
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  33130 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 33079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 70848 - 70899
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  70848 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 70899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 74957 - 75008
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  74957 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 75008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 12704742 - 12704793
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12704742 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12704793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 12714887 - 12714836
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12714887 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12714836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 12718691 - 12718640
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12718691 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12718640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 12723602 - 12723551
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12723602 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12723551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 15008451 - 15008533
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||  || ||||| ||||||||||    
T  15008451 taatgtgatatatttgtatatgcattacttgaattatatatgatgtttgaggtgttgttgatttgca-ttgatattgttatatc 15008533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 16907284 - 16907335
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  16907284 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 16907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 26292418 - 26292367
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  26292418 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 26292367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 39722289 - 39722238
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  39722289 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 39722238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 1867947 - 1868040
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || |||| |||  || ||||| |||||||||| |||| |||||    
T  1867947 taatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttcatttgca-ttgatattgttatatcatgagctgttt 1868040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 13892742 - 13892670
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | |||||||||||||||| | |||| |||| |||||||||    
T  13892742 atgcattatgtggattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgagatgt 13892670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 20220142 - 20220222
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||| ||||||||||||||  ||||||||||| ||||||| |   ||||||||||  |||||||| ||||||||||    
T  20220142 taatgtgatataattgtatatgcattacatgaattatatatgatgtttga---gatgttgatttgcatttgatattgttatatc 20220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 16114264 - 16114220
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||    
T  16114264 agttgttgttgattatcatttgatattgttatatcctgagatgtt 16114220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 16117417 - 16117373
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||    
T  16117417 agttgttgttgattatcatttgatattgttatatcctgagatgtt 16117373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 147754 - 147704
Alignment:
Q  33 agtaatgtaatatatttgtatatgcattatgtgaattatataagatgttta 83  Q
    |||||||  ||||||||||||| |||||||||| ||||||| |||||||||    
T  147754 agtaatgagatatatttgtataagcattatgtggattatatgagatgttta 147704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 11303439 - 11303402
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  11303439 gatgttgattaccatttgatgttgttatattttgagat 11303402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 15113046 - 15113009
Alignment:
Q  100 catttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  15113046 catttgatattgttatatcttgagatgtttaagtgttg 15113009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 16108659 - 16108696
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  16108659 gatgttgattaccgtttgatgttgttatatcttgagat 16108696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 23664923 - 23664960
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  23664923 gatgttaattaccatttgatgttgttatatcttgagat 23664960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 29796800 - 29796763
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  29796800 gatgttaattaccatttgatgttgttatatcttgagat 29796763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 29800619 - 29800582
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  29800619 gatgttaattaccatttgatgttgttatatcttgagat 29800582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 34957488 - 34957416
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| |  ||||| ||||||||||| |||| |||| |||||||||    
T  34957488 atgcattatgtggattatgtatgatgtttaagtagg-gttgactatcatttgatattgtcatattttgagatgt 34957416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 10056809 - 10056707
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056809 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 10056710  T
Q  132 gtg 134  Q
    |||    
T  10056709 gtg 10056707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 17048086 - 17048186
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  17048086 gtaatgtaatatatttgtacatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 17048185  T
Q  134 g 134  Q
    |    
T  17048186 g 17048186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 18212903 - 18212805
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18212903 tagtaatgagatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 18212805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 16043183 - 16043087
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16043183 tagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 16043087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 51463782 - 51463867
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51463782 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatgatttgatgttgttatat 51463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 13591876 - 13591974
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  13591876 tagtaatgtgatatagttgtatatgcattatgtgaatcatataagatgtttaagttgatgttgattatcatttgatattgttatattttgagatgttta 13591974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 24047249 - 24047347
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  24047249 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttaagatgttta 24047347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 32306945 - 32307043
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  32306945 tagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattattatttaatattgttatatcttgagatgttta 32307043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 23803179 - 23803264
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  23803179 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatgattttatgttgttatat 23803264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 14852825 - 14852924
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||    
T  14852825 tagtaatgtgatatatttgcatatgcattatgtgaattatataagatgtttaagttgatgttgaaatattatttgatattgttatatcttgagatgttta 14852924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 26050425 - 26050521
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| || |||||||| ||||||||| |||||||||||||||||||||    
T  26050425 tagtaatgtgatatatttgtatatgcattatgtggattatataagatgtttaag-tgttgttgattttcatttgatattgttatatcttgagatgttt 26050521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 40907230 - 40907126
Alignment:
Q  44 atatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtctgtg 143  Q
    ||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||||||| |||||| |||||    
T  40907230 atatttgtaaatgcattatgtggattatatatgatgtttatgttgatgttgattatcatttgatatttttatatcttgagatgtttatgtgttgcctgtg 40907131  T
Q  144 ctgct 148  Q
     ||||    
T  40907130 ttgct 40907126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 12611188 - 12611106
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12611188 tagtaatgtaatatatttgtatatgcatt---tgaattatataagatgtttaagttgatgttgattatgatttgatgttgttatat 12611106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 630618 - 630695
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgt 109  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  630618 tagtaatgtaatatatttgtatatgcattatgtggattatataagatgttaaagttgatgttgattatgatttgatgt 630695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 40907084 - 40906969
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| || ||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||     
T  40907084 tagtaatgtgatatagttatatatgcatgatgtggattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgtttat 40906986  T
Q  132 gtgttgtctgtgctgct 148  Q
    ||| ||| |||| ||||    
T  40906985 gtgatgtttgtgttgct 40906969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 15041911 - 15042010
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||| |||||||| |||||||||    
T  15041911 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgattaagttgatgattgattattatttgacattgatatatcttaagatgttta 15042010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 15112513 - 15112414
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||| |||||||| |||||||||    
T  15112513 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgattaagttgatgattgattattatttgacattgatatatcttaagatgttta 15112414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 14746570 - 14746635
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14746570 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 14746635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 14825639 - 14825551
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  || ||| |||||||||||    
T  14825639 tagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgattattcttggatattgttatatct 14825551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 45365790 - 45365916
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||| ||||||||| ||||||||||||  ||| ||| ||||||| |||| ||||||||||||||||| ||||||  ||||||||  ||||||||||       
T  45365790 tccaataatatcaccgctttttgtagagcataaaggggaaaagtattgagtgggaatgccatcaataggaagaacgtgagtctttgtccaagacgaacgc 45365889  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    ||||| |||||||||||||||||||||    
T  45365890 actttatattctttcatcacccatatt 45365916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 15791942 - 15791857
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatct 119  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||    
T  15791942 taatgtgatatagttgtatatgcattatgtgaattatacaagatgtttaagttgatgttgaattatcctttgatattgttatatct 15791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 17333451 - 17333352
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaa--gttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| ||||  |||| || | ||||| ||||||| |||||||||||||||||||||    
T  17333451 tagtaatgtaatatatttgtatatgcattatgtggattatatatgatgattaagtgttgttgattattattatttgatattgttatatcttgagatgttt 17333352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 4831496 - 4831580
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4831496 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 4831580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 4834791 - 4834875
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4834791 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 4834875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 14047799 - 14047715
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||| ||| |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  14047799 tatattcgtaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 14047715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 26789506 - 26789441
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaatt-atataagatgtttaagttgatgttgattat 99  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26789506 taatgtgatatatttgtatatgcattatgtgaattaatataagatgtttaagttgatgttgattat 26789441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 14185112 - 14185045
Alignment:
Q  70 atataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  14185112 atatgagatgtttaagttgatgttgattatcatttgatgatgttatatcttgagacgtttatgtgttg 14185045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 30146546 - 30146453
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgtt 136  Q
    |||||||| | |||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||||    
T  30146546 tatatttgcaaatgcattaagtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgtctatgtgtt 30146453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 49043778 - 49043864
Alignment:
Q  201 aagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||   ||| |||||||  |||||||||||||||||||||||||||    
T  49043778 aagtaatgagtgggaatgacatcaatagaaaaaacaagagtcttagtccatgacgaatgcactttgtattctttcatcacccatatt 49043864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 26045268 - 26045340
Alignment:
Q  56 gcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||| |||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||    
T  26045268 gcattatgtggattatataagatgtttaagt-gttgttgattttcatttgatattgttatatcttgagatgttt 26045340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 49038498 - 49038574
Alignment:
Q  211 agggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||||||||  |||||| ||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||    
T  49038498 agggaatgccactaatagacagaacaagagtcttagtccaagacgaatgaactttgtattctttcatcacccatatt 49038574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 7790519 - 7790445
Alignment:
Q  213 ggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||| |||||||||||||||||||||| ||   |||||||||||  |||||||||||||||||||||||||||    
T  7790519 ggaatggcatcaatagaaagaacaagagttttagtccaagacgaatgcactttgtattctttcatcacccatatt 7790445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 7908793 - 7908667
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||| |||||||||  |||||||||||  ||  |||| |||||| |||   |||||| |||||| ||||||||||||||| || | |||||| ||||      
T  7908793 tccaataatatcaccgttttttgtagagtgtatagggtgaaagtagtgatcaggaatggcatcaacagaaagaacaagagttttattccaagatgaatgc 7908694  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    |||||||||||||||||||||||||||    
T  7908693 actttgtattctttcatcacccatatt 7908667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 12487734 - 12487683
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  12487734 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 12487683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 14954250 - 14954301
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  14954250 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 14954301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 25689893 - 25689842
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  25689893 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 25689842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 27534049 - 27533998
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  27534049 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 27533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 48871052 - 48870929
Alignment:
Q  160 ctccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatt 259  Q
    |||||| ||||||||||||||||||| ||   || ||| ||||| | | |  || |||| |||||| |||||||||||||||||||  ||||||||| ||    
T  48871052 ctccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcggaaatgtcatcaacagaaagaacaagagtctttgtccaagacgagtt 48870953  T
Q  260 aactttgtattctttcatcaccca 283  Q
     ||||||||||| |||||||||||    
T  48870952 cactttgtattcattcatcaccca 48870929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 283
Target Start/End: Complemental strand, 48876356 - 48876233
Alignment:
Q  160 ctccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatt 259  Q
    |||||| ||||||||||||||||||| ||   || ||| ||||| | | |  || |||| |||||| |||||||||||||||||||  ||||||||| ||    
T  48876356 ctccaataatatcaccactttttgtacagcacaatggggaaaaggactcatcggaaatgtcatcaacagaaagaacaagagtctttgtccaagacgagtt 48876257  T
Q  260 aactttgtattctttcatcaccca 283  Q
     ||||||||||| |||||||||||    
T  48876256 cactttgtattcattcatcaccca 48876233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 48899231 - 48899105
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||| |||||  |||||||||||| ||   || |||||||||||   || ||||||||||||||||| |||||||||||||  |  |||||| || ||     
T  48899231 tccaataatatagccactttttgtacagcacaatgggtaaaagtacatagtgggaatgccatcaataggaagaacaagagtcactgtccaagaggatttt 48899132  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    ||||| |||||||||||||||||||||    
T  48899131 actttatattctttcatcacccatatt 48899105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 10712873 - 10712828
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  10712873 tgttgattatcatttgatattgttatatcttgagatgtttacgtgt 10712828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 10926643 - 10926598
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  10926643 tgttgattatcatttgatattgttatatcttgagatgtttacgtgt 10926598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 19857636 - 19857584
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtct 140  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  19857636 gatgttgattattatttgatgttgttatatcttgaggtgtttaagtgttgtct 19857584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 48147333 - 48147409
Alignment:
Q  211 agggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||||||||||||||| | |  |||||||||   |||||||||||  |||||||||||||||||||||||||||    
T  48147333 agggaatgccatcaatagacaaattaagagtcttagtccaagacgaatgcactttgtattctttcatcacccatatt 48147409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 48886683 - 48886615
Alignment:
Q  215 aatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcaccca 283  Q
    |||| |||||| |||||||||||||||||||  ||||||||| || ||||||||||| |||||||||||    
T  48886683 aatgtcatcaacagaaagaacaagagtctttgtccaagacgagttcactttgtattcattcatcaccca 48886615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 7771834 - 7771760
Alignment:
Q  213 ggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||| |||||| ||||||||||||||| ||   ||| |||||||  |||||||||||||||||||||||||||    
T  7771834 ggaatggcatcaacagaaagaacaagagttttagtccatgacgaatgcactttgtattctttcatcacccatatt 7771760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 7813908 - 7813842
Alignment:
Q  221 atcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||| ||||||||||||||| || | |||||||||||  |||||||||||||||| ||||||||||    
T  7813908 atcaacagaaagaacaagagttttattccaagacgaatgcactttgtattctttcaacacccatatt 7813842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 48155999 - 48156125
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||||||| |||||| |||||||||||  ||  ||||||||| || |||    |||||||||||||| ||| |||||||| ||   |||||| ||||      
T  48155999 tccaacaatgtcaccattttttgtagagcatattgggtaaaaggaaagagtataaatgccatcaataggaaggacaagagttttagtccaagaagaatgc 48156098  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    ||||||||||| |||||||||||||||    
T  48156099 actttgtattcgttcatcacccatatt 48156125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 48864466 - 48864400
Alignment:
Q  221 atcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||||| |||||||||| ||||   |||||||||||  |||||||||||||||||||||||||||    
T  48864466 atcaataggaagaacaagaatcttagtccaagacgaatgcactttgtattctttcatcacccatatt 48864400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 45384460 - 45384588
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatg--ccatcaatagaaagaacaagagtcttttcccaagacgaat 258  Q
    ||||| ||||||||| ||||||||||||  ||| ||| ||| | |  |||| |||||   ||||||| || ||||||| ||||||||  |||||||||||    
T  45384460 tccaataatatcaccgctttttgtagagcataaaggggaaagggatagagaaggaatataccatcaaaaggaagaacacgagtctttgtccaagacgaat 45384559  T
Q  259 taactttgtattctttcatcacccatatt 287  Q
      ||||| |||||||||||||||||||||    
T  45384560 gcactttatattctttcatcacccatatt 45384588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 49547744 - 49547781
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49547744 gatgttgattatcatttgatgttgttatatcttgagat 49547781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 4561417 - 4561468
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  4561417 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 4561468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 5757021 - 5757072
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  5757021 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 5757072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 9556553 - 9556502
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  9556553 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 9556502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 14757505 - 14757556
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  14757505 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 14757556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 33742401 - 33742350
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  33742401 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 33742350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 7773447 - 7773521
Alignment:
Q  213 ggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||| | |||| ||||||||||||||  ||   |||||||||||  |||||||||||||||||||||||||||    
T  7773447 ggaatggcttcaacagaaagaacaagagatttaatccaagacgaatgcactttgtattctttcatcacccatatt 7773521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 7801068 - 7801002
Alignment:
Q  221 atcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||| ||||||||||||||| || | |||||||||||  |||||||| ||||||| ||||||||||    
T  7801068 atcaacagaaagaacaagagttttattccaagacgaatgcactttgtaatctttcaacacccatatt 7801002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 7878822 - 7878748
Alignment:
Q  213 ggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||| ||||||  |||||||||||||| ||   |||||| ||||  |||||||||||||||||||||||||||    
T  7878822 ggaatgacatcaaccgaaagaacaagagttttaatccaagatgaatgcactttgtattctttcatcacccatatt 7878748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 15497041 - 15497083
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  15497041 gatgttgattattatttgatgttgttatatcttgaggtgttta 15497083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 45371696 - 45371770
Alignment:
Q  213 ggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||| |||||| |||| |||||||| ||||||   |||||||||||  ||||||||||||||||| |||||||||    
T  45371696 ggaacgccatcgataggaagaacaaaagtcttagtccaagacgaatgcactttgtattctttcataacccatatt 45371770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 287
Target Start/End: Complemental strand, 48853172 - 48853046
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||| |||||||||||| |||||| |   ||  ||| ||||||| |||| |||||||  |  || ||||||||||||||||||   ||||||||||       
T  48853172 tccaataatatcaccactctttgtacaacatattggggaaaagtagtgagtgggaatggaactaaaagaaagaacaagagtcttagtccaagacgaacgc 48853073  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    ||||||||||||||||| |||||||||    
T  48853072 actttgtattctttcatgacccatatt 48853046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 14048769 - 14048732
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14048769 gatgttgattaccatttgatgttgttatatcttgagat 14048732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 36038062 - 36038025
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  36038062 gatgttgattaccatttgatgttgttatatcttgagat 36038025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 52873148 - 52873197
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||||||||||| |||||||||||||||| |||||| |||||| ||||||    
T  52873148 gatgttgattattatttgatgttgttataccttgaggtgtttaagtgttg 52873197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 17810295 - 17810251
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||    
T  17810295 agttgttgttgattatcatttgatattgttatatcctgagatgtt 17810251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 287
Target Start/End: Original strand, 7237313 - 7237439
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaatta 260  Q
    ||||| |||||||||| |||||||||||  ||  |||| |||||| |||   ||||||| || || || ||| |||||||| ||   |||| ||||||      
T  7237313 tccaataatatcaccattttttgtagagtgtatagggtgaaagtagtgaccaggaatgcgatgaagaggaagcacaagagttttagtccaaaacgaatgc 7237412  T
Q  261 actttgtattctttcatcacccatatt 287  Q
    | |||||||||||||||||||||||||    
T  7237413 attttgtattctttcatcacccatatt 7237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 7766064 - 7766007
Alignment:
Q  230 aagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||||| |||||   ||| |||||||  |||||||||||||||||||||||||||    
T  7766064 aagaacaagtgtcttagtccatgacgaatacactttgtattctttcatcacccatatt 7766007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 7786886 - 7786829
Alignment:
Q  230 aagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||||||||||| | ||||||  |||  || ||||||||||||||||||||||||    
T  7786886 aagaacaagagtcttattccaagataaatgcacgttgtattctttcatcacccatatt 7786829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 15534373 - 15534336
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  15534373 gatgttgattaccatttgatgttgttatattttgagat 15534336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 52243146 - 52243230
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataag-atgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||| ||||||||||||||  || |||||||| | |||||| || || |||||| | ||||||||| ||||||||||    
T  52243146 taatgtgatataattgtatatgcattacttggattatatatgaatgtttgagatgttgttgaatttcatttgatattgttatatc 52243230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 19808312 - 19808420
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19808312 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttatgttgatgttgattatcatttgatgttgttatatcttgagatgtttac 19808411  T
Q  132 gtgttgtct 140  Q
    ||| |||||    
T  19808412 gtgctgtct 19808420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 22237969 - 22238073
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22237969 tagtaatgtattatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 22238068  T
Q  132 gtgtt 136  Q
    |||||    
T  22238069 gtgtt 22238073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 25363154 - 25363255
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  25363154 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 25363253  T
Q  134 gt 135  Q
    ||    
T  25363254 gt 25363255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 17461002 - 17461106
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||     
T  17461002 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctctagatgtttat 17461101  T
Q  132 gtgtt 136  Q
    |||||    
T  17461102 gtgtt 17461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 23659578 - 23659480
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  23659578 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctcaagatgttta 23659480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 14397812 - 14397915
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  14397812 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgctgttgattatcaattgatattgttatatcttgagatgtttac 14397911  T
Q  132 gtgt 135  Q
    ||||    
T  14397912 gtgt 14397915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 37515876 - 37515778
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  37515876 tagtaatgtgatataattgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgatatgttta 37515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 25484189 - 25484274
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25484189 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatgatttgatgttattatat 25484274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 17086103 - 17086201
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  17086103 tagtaatgtgatatagttgtatatgcattatgtgaattatataagatatttaagttgatgttgattattatttggtattgttatatcttgagatgttta 17086201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 16799658 - 16799561
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||||    
T  16799658 tagtaatgtaatatatttgtatatgcattatgtgaaatatataagatgttttaagttgatgttgattatcatttgatattgttatatctggatatgtt 16799561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 17438166 - 17438272
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  17438166 tagtaatgtgatatatttgtatatgcattatgtgaattatataatatgcttaagttgatgattgattattatttgacattgttatatcttgagatgttta 17438265  T
Q  131 cgtgttg 137  Q
     ||||||    
T  17438266 tgtgttg 17438272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 23943943 - 23944039
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||||||| || |||||    
T  23943943 tagtaatgtaatatatttgtatatgcattatgtgaattatttaagatgtttaagttgttgttgattatcacttgatattattatatctggatatgtt 23944039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 20502063 - 20502149
Alignment:
Q  44 atatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||||| ||||    
T  20502063 atatttgtatatgcattatgtgaattatataagatgtttatgttgttgttggttatcatttgatattgttatatcttgagatattta 20502149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 23409930 - 23409864
Alignment:
Q  68 ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23409930 ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 23409864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 22996011 - 22995927
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22996011 taatgtgatatagttgtatatgcattatgtgatttatgtaagatgtttaagttgatgttgattatcatttgatattgttatatct 22995927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 5083103 - 5083202
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  5083103 tagtaatgtgatatatttgtatatgcattatgtgaatcatataagatccttaagttgatgattgattattatttgacattgttatatcttgagatgttta 5083202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 18833733 - 18833635
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||| |||||||||||    
T  18833733 tagtaatgtgatatatgtgtatatgcattatgtgaattatataagatgttttaagttgatgttgtttattatttgatattgttatatc-tgagatgttta 18833635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 23667980 - 23667885
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgtt-gattatcatttgatgttgttatatcttgagatg 126  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||| ||||||| ||||||||||||||||||    
T  23667980 tagtaatgtgatatatttgtatatgcattatatgaattatataagatgtttaagttgatgttaaaatattatttgatattgttatatcttgagatg 23667885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 14103177 - 14103262
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    |||||| ||||| ||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14103177 taatgtgatataattgtatacgcattacatgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatctt 14103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 22253115 - 22253210
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    ||||||||| ||| | || ||||||||||||||| || | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  22253115 tagtaatgtgataaagttatatatgcattatgtggatcacataagatgtttaagttgatgttaattatcatttgatattgttatatcttgagatgt 22253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 19154838 - 19154932
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| || ||||| || |||||||| || ||||||    
T  19154838 taatgtaatatatttgtatatgcattatctgaattatttaagatgtttaagttgttgttgattagcacttgatattattatatctggatatgttt 19154932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 20533358 - 20533455
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| ||||||| |||| ||||| || |||||||| || ||||||    
T  20533358 tagtaatgtaatataattgtatatgcattttgtgaattatttaagatgtttaagttgttgttgatcatcacttgatattattatatctggatatgttt 20533455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 22963364 - 22963461
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||| ||||| ||||||||||||| ||||||||||| || ||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  22963364 gtaatgtgatataattgtatatgcattgtgtgaattataaaatatgttaaagttgatgttgaattattatttgatattgttatatcttgagatgttta 22963461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 23914183 - 23914110
Alignment:
Q  58 attatgtgaatta-tataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23914183 attatgtgaattaatataagatgtttaagttgttgctgattatcatttgatgttgttatatcttgagatgttta 23914110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 21346185 - 21346239
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21346185 gtaatgtaatatatttgtatatgcattatgtgaattatataagatatttaagttg 21346239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 44476814 - 44476753
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  44476814 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatattgttatatctt 44476753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 44480076 - 44480015
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  44480076 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatattgttatatctt 44480015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 16401983 - 16402054
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatc------atttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||    
T  16401983 tatatatgatgtttaagttgatgttgattatcatttgaatttgatgttgttatatcttgagatgtttacgtg 16402054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 19936956 - 19937004
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19936956 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatat 19937004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 17439458 - 17439541
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| ||||||||||    
T  17439458 taatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatc 17439541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 18862728 - 18862779
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  18862728 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 18862779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 21410973 - 21410922
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  21410973 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 21410922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 21805465 - 21805414
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  21805465 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 21805414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 21828097 - 21828148
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  21828097 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 21828148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 28397717 - 28397635
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||  || ||| |||||||||    
T  28397717 taatgtgatatatt-gtatatgcattatgtgaattatatgagatgttttaagttgatgttgattattcttggatattgttatat 28397635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 35026831 - 35026903
Alignment:
Q  51 tatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||||||||||||||||||||| ||||||| |   ||||||||||||| |||||| |||||||||||||||||    
T  35026831 tatatgcattatgtgaattatatatgatgttttaa--gatgttgattatcgtttgatattgttatatcttgagat 35026903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 37116517 - 37116434
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| ||||||||||    
T  37116517 taatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatc 37116434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 22419367 - 22419455
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| ||||  |||||||||||||||||||||||| || ||||||| |   ||||||||||||| |||||  |||||||||||||||||    
T  22419367 taatgtgatatgattgtatatgcattatgtgaattatttatgatgtttta--agatgttgattatcgtttgaaattgttatatcttgagat 22419455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 2418839 - 2418906
Alignment:
Q  48 ttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    ||||||||||||||||||||||||||| ||||||| |   ||||||||||||| |||||| |||||||||    
T  2418839 ttgtatatgcattatgtgaattatatatgatgtttca--agatgttgattatcgtttgatattgttatat 2418906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 8728620 - 8728682
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||  |||||||||||    
T  8728620 ttatgtggattatataagatgtttaagttgatgttgaattaccatttgatactgttatatctt 8728682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 15349315 - 15349248
Alignment:
Q  220 catcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||||  |||||||||| |||||  |||||| || || |||||||||||||||||||||||||||    
T  15349315 catcaatattaagaacaagaatctttgtccaagaagagttcactttgtattctttcatcacccatatt 15349248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 19278366 - 19278417
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  19278366 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 19278417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 21972668 - 21972719
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  21972668 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 21972719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 21976753 - 21976804
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  21976753 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 21976804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 27941604 - 27941655
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttta 83  Q
    ||||||||  |||||||||||||||||||||||| ||||||| |||||||||    
T  27941604 tagtaatgagatatatttgtatatgcattatgtggattatatgagatgttta 27941655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 43251836 - 43251785
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  43251836 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 43251785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 1327013 - 1327055
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  1327013 gatgttgattattatttgatgttgttatatcttgaggtgttta 1327055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 21346241 - 21346282
Alignment:
Q  62 tgtgaattatataagatgtttaagttgatgttgattatcatt 103  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  21346241 tgtgaattatataagatatttaagttgttgttgattatcatt 21346282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 17266945 - 17267028
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| |||||  |||||||||||||   |||||||||| ||||||| || || ||||||||  |||||||| ||||||||||    
T  17266945 taatgtgatataaatgtatatgcattacaagaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatc 17267028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 40492802 - 40492887
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||| |||||||||||||||||||||| |   |||||||| || ||||||| || || ||||||||  |||||||| ||||||||||    
T  40492802 tagtgatgtaatatatttgtatatgcaat-catgaattatttatgatgtttgagatgttgttgatttgcatttgatattgttatatc 40492887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 18024465 - 18024506
Alignment:
Q  51 tatatgcattatgtgaattatataagatgtttaagttgatgt 92  Q
    |||||||||||| || |||||| |||||||||||||||||||    
T  18024465 tatatgcattatatggattatacaagatgtttaagttgatgt 18024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 21329176 - 21329104
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| || || || ||||||||||| | |||||||||||||||| | |||| |||| |||||||||    
T  21329176 atgcattatgtggataatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgagatgt 21329104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 21967540 - 21967612
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | |||||||||||||||| | |||| |||| ||| |||||    
T  21967540 atgcattatgtggattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgggatgt 21967612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 22364816 - 22364748
Alignment:
Q  49 tgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||||||||||  ||||||||||| ||||||| || || |||||||| || |||||| ||||||||||    
T  22364816 tgtatatgcattacatgaattatatatgatgtttgagatgttgttgattttc-tttgatattgttatatc 22364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 34950694 - 34950622
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||  || ||||||||||| | |||||||||||||||| | ||||||||| ||| |||||    
T  34950694 atgcattatgtggattaagtatgatgtttaagtag-tgttgattatcatttggtattgttatattttgggatgt 34950622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 169702 - 169801
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  169702 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 169801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 142753 - 142654
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  142753 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacattgttatatcttgagatgttta 142654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 330 - 225
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  330 tagtaatgtaatatatttgtatatgcattatttgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgatatgtttac 231  T
Q  132 gtgttg 137  Q
    ||||||    
T  230 gtgttg 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 24547 - 24652
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  24547 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgaaatgtttaa 24646  T
Q  132 gtgttg 137  Q
    ||||||    
T  24647 gtgttg 24652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 30138878 - 30138979
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30138878 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgtttac 30138977  T
Q  132 gt 133  Q
    ||    
T  30138978 gt 30138979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 22107386 - 22107482
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22107386 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgttta 22107482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 6765999 - 6765901
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6765999 tagtaatgtattatatttgtatatgcattatgtgaattatataagatgcttaagttgatgttgattattatttgatgttgttatatcttgagatgttta 6765901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 42960713 - 42960608
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||     
T  42960713 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgtttat 42960614  T
Q  132 gtgttg 137  Q
    ||||||    
T  42960613 gtgttg 42960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 37598832 - 37598930
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  37598832 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 37598930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 28370971 - 28371069
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  28370971 tagtaatgagatatatttgcatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 28371069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 23469973 - 23469876
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  23469973 tagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgat-atggtatatcttgagatgttta 23469876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 25576805 - 25576902
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  25576805 tagtaatgtgatatagttgtatatgcatgatgtgaattatataagatgtttaagttgatgttgattatta-ttgatattgttatatcttgagatgttta 25576902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 25574419 - 25574516
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  | ||||||||||||||||||||    
T  25574419 tagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatta-ttgaaatagttatatcttgagatgttta 25574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 25575612 - 25575709
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  | ||||||||||||||||||||    
T  25575612 tagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatta-ttgaaatagttatatcttgagatgttta 25575709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 21328168 - 21328252
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  21328168 taatgtgatatagttgtatatgcattatgtgatttatgtaagatgtttaagttgatgttgattatcatttgatattgctatatct 21328252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 22336711 - 22336640
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  22336711 ttatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 22336640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 22340249 - 22340178
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  22340249 ttatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 22340178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 21809531 - 21809629
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| | ||| ||||| ||||||| ||||||||||||||||    
T  21809531 tagtaatgtgatatatt-gtatatgcattatgtgatttacataagatgtttaagttgatgttgaaatattatttggtgttgttctatcttgagatgttta 21809629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 33895607 - 33895666
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgtt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33895607 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgtt 33895666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 26732787 - 26732880
Alignment:
Q  36 aatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||| ||  ||||||||| ||||||| |||||||||| |||||||||||    
T  26732787 aatgtgatatatttgtatatgcattatgtggattaaataagatgtttaag-tgtcgttgattattatttgatattgttatatcctgagatgttta 26732880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 26740600 - 26740693
Alignment:
Q  36 aatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||| || |||||||||| ||||||| |||||||||| | |||||||||    
T  26740600 aatgtgatatatttgtatatgcattatgtggattaaataagatgtttaag-tgttgttgattattatttgatattgttatatccttagatgttta 26740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 18356323 - 18356264
Alignment:
Q  76 gatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  18356323 gatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 18356264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 21731426 - 21731509
Alignment:
Q  48 ttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| | ||| ||||| ||||||| ||||||||||||||||    
T  21731426 ttgtatatgcattatgtgatttacataagatgtttaagttgatgttgaaatattatttggtgttgttctatcttgagatgttta 21731509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 27988892 - 27988978
Alignment:
Q  46 atttgtatatgcatt-atgtgaattatataagatgtttaa--gttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||| |||||||||| |||| |||||    
T  27988892 atttgtatatgcattgatgtgaattatacaagatgtttaaatgttgatgttgattatcatttgatattgttatatcatgagctgttt 27988978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 10816562 - 10816478
Alignment:
Q  43 tatatttgtatatgcattatgtgaa-ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| | ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10816562 tatatttgcaaatgcattatgtggagttatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 10816478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 22750325 - 22750264
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  22750325 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatattgttatatctt 22750264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 23538588 - 23538504
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  23538588 tatatttgaaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatgatttgatattgttatatcttgagatgt 23538504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 20910910 - 20910969
Alignment:
Q  76 gatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  20910910 gatgtataagttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 20910969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 19511577 - 19511516
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  19511577 ttatgtggattatataagatgtttaagttgatgttgattaccatttgatatcgttatatctt 19511516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 15796594 - 15796494
Alignment:
Q  30 gctagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaag-ttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||| |||||| ||||| |||||||| || |||| ||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||| |||| ||||    
T  15796594 gctaataatgtgatataattgtatatacagtatgcgaattataagagatgtttaagattgatgttgattatcatttgatattgctatatcatgagctgtt 15796495  T
Q  129 t 129  Q
    |    
T  15796494 t 15796494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 10753387 - 10753334
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  10753387 agttgttgttgattatcatttgatattgttatatcttgagatgtttacatgttg 10753334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 9120200 - 9120128
Alignment:
Q  215 aatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    |||||| |||||||| | ||||||||| || | |||||| ||||  |||||||||||||||||||||||||||    
T  9120200 aatgccgtcaatagacaaaacaagagttttcttccaagaggaatgcactttgtattctttcatcacccatatt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 15236863 - 15236914
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  15236863 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 15236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 19472803 - 19472854
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  19472803 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 19472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 20295870 - 20295819
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  20295870 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 20295819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 40723670 - 40723721
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| ||||||||||||||| || ||| |||||||||||||||||||||||    
T  40723670 agttgttgttgattatcatttaatattgatatatcttgagatgtttacgtgt 40723721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 22178172 - 22178266
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||  |||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| |||| ||||| |||| |||||    
T  22178172 taatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttt 22178266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 15236924 - 15236969
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  15236924 tgttgattatcatttgatattgttatatcctgagatgtttatgtgt 15236969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 29448162 - 29448078
Alignment:
Q  45 tatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||||||||||  |||||||  || ||||||| || || ||||||||  |||||||| |||||||||| |||| |||||    
T  29448162 tatttgtatatgcattacatgaattacgtatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgagctgttt 29448078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 29688582 - 29688494
Alignment:
Q  199 aaaagtaatgagagggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||| |||  ||||||| || ||| ||||||||| |||||||||  ||||||||| |  || ||||||| ||||||||||||||||    
T  29688582 aaaagtagtgaatgggaatgtcaccaaaagaaagaacgagagtctttgtccaagacgattgcacattgtattttttcatcacccatatt 29688494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 42561906 - 42562028
Alignment:
Q  161 tccaacaatatcaccactttttgtagaggttaaggggtaaaagtaatgagagggaatgccatca---atagaaagaacaagagtcttttcccaagacgaa 257  Q
    ||||| |||||||||| |||||||| ||| ||| ||| |||||||      ||||||| |||||   |||| |||||||||| ||||   |||||| |||    
T  42561906 tccaataatatcaccattttttgtataggataaagggcaaaagta------gggaatgtcatcataaataggaagaacaagaatcttagtccaagatgaa 42561999  T
Q  258 ttaactttgtattctttcatcacccatat 286  Q
    |  ||||||||||||||||||||||||||    
T  42562000 tgcactttgtattctttcatcacccatat 42562028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 9776550 - 9776513
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  9776550 gatgttaattaccatttgatgttgttatatcttgagat 9776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 179463 - 179423
Alignment:
Q  247 cccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  179463 cccaagatgaatgcactttgtattctttcatcacccatatt 179423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 20572057 - 20572025
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgt 64  Q
    ||||||||||||||| |||||||||||||||||    
T  20572057 tagtaatgtaatatagttgtatatgcattatgt 20572025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 27472590 - 27472482
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27472590 tagtaatataatatatttgtatatgcattatgtgaattatataatatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 27472491  T
Q  132 gtgttgtct 140  Q
    ||| |||||    
T  27472490 gtgctgtct 27472482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 34874163 - 34874260
Alignment:
Q  33 agtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34874163 agtattgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 34874260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 21081689 - 21081788
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  21081689 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgtttttatatctttagatgtttacgtg 21081788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 31345287 - 31345184
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  31345287 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 31345188  T
Q  132 gtgt 135  Q
    ||||    
T  31345187 gtgt 31345184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 23069237 - 23069335
Alignment:
Q  36 aatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  23069237 aatgtaatatatttttatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgtg 23069335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 34137112 - 34137006
Alignment:
Q  31 ctagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  34137112 ctagtaatgtgatataattgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatattgttatctcttgagatgttta 34137013  T
Q  131 cgtgttg 137  Q
     ||||||    
T  34137012 tgtgttg 34137006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 9242097 - 9241999
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9242097 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 9241999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 18358683 - 18358781
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18358683 tagtaatgtattatatttgtatatgcaatatgtgaattatataagatgcttaagttgatgttgattattatttgatgttgttatatcttgagatgttta 18358781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 19662370 - 19662468
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  19662370 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 19662468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 9784848 - 9784754
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||||||||    
T  9784848 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaag--gttgttgattatcattggatgttgttatatcttgagatgttta 9784754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 22173743 - 22173828
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22173743 tagtaatgtaatatatttgtatatgcattaagtgaattatataagatgtttaagttgatgttgattatgatttgatgttgttatat 22173828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 21073442 - 21073540
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21073442 tagtaatgagatatatttgtatattcattatgtggattatataagatatttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 21073540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 21237924 - 21237816
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||||    
T  21237924 tagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgatgatgaattattatttgatattgttatatcttgagatgttta 21237825  T
Q  131 cgtgttgtc 139  Q
     ||| ||||    
T  21237824 tgtgctgtc 21237816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 19201924 - 19202030
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  19201924 tagtaatgtgatatatttgtatatgcattatatgaattatataagatgcttaagttgatgattgattattatttgacattgttatatcttgagatgttta 19202023  T
Q  131 cgtgttg 137  Q
     ||||||    
T  19202024 tgtgttg 19202030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 30643996 - 30644094
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  30643996 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagtagatattgattatcatttgatattgttatatcttgagacgttta 30644094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 6261093 - 6261192
Alignment:
Q  32 tagtaatgtaatatatttgtatat-gcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  6261093 tagtaatgagatatatttgtatattgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagacgttta 6261192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 23707275 - 23707340
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23707275 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 23707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 24918244 - 24918179
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24918244 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 24918179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 23287534 - 23287438
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||| || |||||||||| ||||||| |||||||||||||||||||||    
T  23287534 tagtaatgtgatatatttgtatatgcaatatgtggattatatatgatgattaag-tgttgttgattattatttgatattgttatatcttgagatgttt 23287438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 24681548 - 24681483
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24681548 tatatatgatgtttaagttgatgttgatcatcatttgatgttgttatatcttgagatgtttacgtg 24681483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 24671129 - 24671065
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24671129 tatatatgatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgtttacgt 24671065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 26392542 - 26392455
Alignment:
Q  42 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |  |||||||||| ||||||| |||||||||| |||||||||||    
T  26392542 atatatttgtatatgcattatgtggattagataagatgtttaag-tattgttgattattatttgatattgttatatcctgagatgttta 26392455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 18546894 - 18546991
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaatta-tataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||||||| ||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||| |||||| ||||||| ||| || |||||    
T  18546894 tagtaatgtgatacatttgtatatgcattatgtaaattaatgtaagatgtctaagttgatgttgattatcctttgatattgttatgtctggatatgtt 18546991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 22703258 - 22703174
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  22703258 tatatttgcaaatgcattatgtggaattatatatgatgtttaaattg-tgttgattatcatttgatattgttatatcttgagatgt 22703174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 6482899 - 6482838
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  6482899 ttatgtggattatataagatgtttaagttgatgttaattaccatttgatattgttatatctt 6482838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 6486366 - 6486305
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  6486366 ttatgtggattatataagatgtttaagttgatgttaattaccatttgatattgttatatctt 6486305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 1283412 - 1283361
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  1283412 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 1283361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 30345074 - 30345125
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  30345074 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 30345125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 41531087 - 41531138
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  41531087 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 41531138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 13101597 - 13101682
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgat-gttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||  || ||||||||||||||||    
T  13101597 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgataatttttatatcttgagatgt 13101682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 43947324 - 43947408
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtt-taagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||| ||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||  || ||| |||||||||||    
T  43947324 taatgtgatatatt-gtatatgcactatgtgaattatatgagatgttgtaagttgatgttgattattcttggatattgttatatct 43947408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 24642807 - 24642855
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  24642807 tatatatgatgtttaagttgatgttgattatgatttgatgttgttatat 24642855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 23004909 - 23004835
Alignment:
Q  44 atatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||||||||||||||||||| |||||||| ||||||| || || ||||||||  |||||||| || |||||||    
T  23004909 atatttgtatatgcattatgtggattatatatgatgtttgagatgttgttgatttgcatttgatattattatatc 23004835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 12901595 - 12901646
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12901595 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12901646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 20520145 - 20520227
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||  || ||||| ||||||||||    
T  20520145 taatgtgatatatttgtatatgcattacttgaattatatatgatgtttgagatgttgttgatttgca-ttgatattgttatatc 20520227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 24628562 - 24628613
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  24628562 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 24628613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 24649380 - 24649329
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  24649380 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 24649329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 27379516 - 27379567
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27379516 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 27379567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 27383562 - 27383613
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27383562 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 27383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 27601819 - 27601768
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  27601819 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 27601768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 10101728 - 10101772
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||    
T  10101728 agttgttgttgattatcatttgatattgttatatcctgagatgtt 10101772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 22459579 - 22459617
Alignment:
Q  99 tcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  22459579 tcatttgatgttgttatatctttagatgtttatgtgttg 22459617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 10684735 - 10684772
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  10684735 gatgttaattaccatttgatgttgttatatcttgagat 10684772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 20261411 - 20261374
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  20261411 gatgttgattaccatttgatgttgttatattttgagat 20261374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 1824 - 1926
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1824 tagtaatgtaatatatttgtatatgcattatgtgaatcatataagatgtttaagttgatgttgattatcatttgatgatgttatatcttgagatgtttac 1923  T
Q  132 gtg 134  Q
    |||    
T  1924 gtg 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 6111 - 6207
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6111 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgttta 6207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 20919 - 20819
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  20919 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 20820  T
Q  134 g 134  Q
    |    
T  20819 g 20819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 126124 - 126024
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  126124 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttacgt 126025  T
Q  134 g 134  Q
    |    
T  126024 g 126024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 39423 - 39320
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39423 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 39324  T
Q  132 gtgt 135  Q
    ||||    
T  39323 gtgt 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 23415055 - 23414952
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23415055 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 23414956  T
Q  132 gtgt 135  Q
    ||||    
T  23414955 gtgt 23414952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 14979337 - 14979435
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  14979337 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctcaagatgttta 14979435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 19773494 - 19773594
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  19773494 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgttcttgattatcatttgatattgttatatcttgagatgtttacgt 19773593  T
Q  134 g 134  Q
    |    
T  19773594 g 19773594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 27556813 - 27556710
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  27556813 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgttgatcatcatttgatgttgttatatattgagatgtttac 27556714  T
Q  132 gtgt 135  Q
    ||||    
T  27556713 gtgt 27556710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 15705395 - 15705497
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |    
T  15705395 gtaatgtaatatatttgtttatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttactt 15705494  T
Q  134 gtt 136  Q
    |||    
T  15705495 gtt 15705497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 25619672 - 25619770
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  25619672 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatttttaagttgatgttgattatcatttgatgttgttatatctcaagatgttta 25619770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 18453353 - 18453255
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18453353 tagtaatgtgatatagttgtatatgcattttgtgaattatataagatgtttaagttgatgttgattatcatttgattttgttatatcttgagatgttta 18453255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 23838345 - 23838247
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23838345 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 23838247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 20556808 - 20556893
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20556808 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatgatttgatgttgttatat 20556893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 22806100 - 22806001
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  22806100 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgttt-agttgttgttgattatcatttgatattgttatatcttgtgatgtttacgt 22806002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 28103851 - 28103950
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28103851 taatgtgatataaatgtatatgcattatgtgaattatataagttgtttaagttgatgttgattatcatttgatgttgttataccttgagatgtttacgtg 28103950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 4476995 - 4476897
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  4476995 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 4476897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 15817471 - 15817573
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  15817471 tagtaatgtggtatatttgaatatgcattatgtgaattatatatgatgtttaagttgatgttaattatcatttgatattgttatatcttgagatgtttac 15817570  T
Q  132 gtg 134  Q
    |||    
T  15817571 gtg 15817573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 25755057 - 25754972
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  25755057 tagtaatgtaatatatttgtatatgcattatgtgaattttataagatgtttaagttgatgttgattatgatttgatgttgttatat 25754972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 33443216 - 33443122
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||| ||||||| |||||||||||||||||||||    
T  33443216 tagtaatgtaatatatttgtatatgcattatgtgaattatttaagatgtttaagt---tgttgattattatttgatattgttatatcttgagatgttt 33443122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 20136840 - 20136739
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||| |||| ||||| |||||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20136840 tagttatgtgatataattgtatat-cattatgtggattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 20136742  T
Q  132 gtg 134  Q
    |||    
T  20136741 gtg 20136739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 22196029 - 22196130
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||| |||| ||||| |||||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22196029 tagttatgtgatataattgtatat-cattatgtggattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 22196127  T
Q  132 gtg 134  Q
    |||    
T  22196128 gtg 22196130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 23539130 - 23539024
Alignment:
Q  42 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtctg 141  Q
    ||||||||||| |||||||||||| |||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||| || ||| || |||    
T  23539130 atatatttgtaaatgcattatgtggattatatatgatgtttatgttgatgttaattatcatttgatattgttatatcttgagatgtatatgtgctgcctg 23539031  T
Q  142 tgctgct 148  Q
    || ||||    
T  23539030 tgttgct 23539024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 20224114 - 20224018
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||||||| || |||||    
T  20224114 tagtaatgtaatatatttgtgtatgaattatgtgaattatttaagatgtttaagttgttgttgattatcacttgatattattatatctggatatgtt 20224018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 22118098 - 22118002
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||||||| || |||||    
T  22118098 tagtaatgtaatatatttgtgtatgaattatgtgaattatttaagatgtttaagttgttgttgattatcacttgatattattatatctggatatgtt 22118002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 20182962 - 20182866
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||  ||||||||| || ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  20182962 tagtaatgtgatatagttgtatatgcatt--gtgaattatgtatgatgtttaagttgttgttaattatcatttgatattgttatatcttgagatgttta 20182866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 22153029 - 22153125
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||  ||||||||| || ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  22153029 tagtaatgtgatatagttgtatatgcatt--gtgaattatgtatgatgtttaagttgttgttaattatcatttgatattgttatatcttgagatgttta 22153125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 18896265 - 18896354
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||    
T  18896265 tagtaatgggatataattgtatatgcattatgtgaattatataagatgtttaagttgttgttgattgtca-ttgatattgttatatcttga 18896354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 16493317 - 16493219
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| | ||| ||||| ||||||| ||||||||||||||||    
T  16493317 tagtaatgtgatatatt-gtatatgcattatgtgatttacataagatgtttaagttgatgttgaaatattatttggtgttgttctatcttgagatgttta 16493219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 18177624 - 18177719
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaag-ttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||  ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| |||| |||||    
T  18177624 taatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgattatcatttgatattgttatatcatgagttgttt 18177719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 18199368 - 18199463
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaag-ttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||  ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| |||| |||||    
T  18199368 taatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgattatcatttgatattgttatatcatgagttgttt 18199463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 18204247 - 18204152
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaag-ttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||  ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| |||| |||||    
T  18204247 taatgtgatataaatgtatatgcattaagtgaattatatatgatgtttaagattgatgttgattatcatttgatattgttatatcatgagttgttt 18204152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 23076900 - 23076806
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||||| ||||| || |||||||| || ||||||    
T  23076900 taatgtgatatatttgtatatgcattacatgaattatatatgatgtttaagttgttgttgattatcacttgatattattatatctggatatgttt 23076806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 23538978 - 23538884
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| ||||| |||||||||| |||||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||||| |||| |||||    
T  23538978 taatgtgatatagttgtatatgcgttatgtgaatgatatatgatgtttaggttgatgttgattgtcatttgatattgttatatcatgagctgttt 23538884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 19362596 - 19362507
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| ||||| || ||||||||||||||||||||| ||||||||| |||||| |||||||| ||| ||||| ||||||||||||||    
T  19362596 tagtaatgtgatataattttatatgcattatgtgaattatttaagatgttcaagttgttgttgattgtca-ttgatattgttatatcttga 19362507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 23528056 - 23528150
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||||||| || || ||||||||||||||||||||||||||| ||||||||||| |||||||||  || |||||  |||||| |||||||||||||    
T  23528056 tagtaatgtgatgtagttgtatatgcattatgtgaattatatatgatgtttaagtcgatgttgatcgtcctttga--ttgttacatcttgagatgtt 23528150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 25752887 - 25752838
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25752887 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtt 25752838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 29416865 - 29416949
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  29416865 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttaattatcatttgatattgttatatcttgagatgt 29416949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 35008318 - 35008224
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||||||||||| |||||  ||||||||||| ||||||||||||| | |||||||||| ||||| || |||||||| || ||||||    
T  35008318 taatgtgatatatttgtatattcattacatgaattatatatgatgtttaagttgtttttgattatcacttgatattattatatctggatatgttt 35008224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 31477893 - 31477949
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtct 140  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  31477893 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgtcgtct 31477949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 16760318 - 16760267
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  16760318 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 16760267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 22949131 - 22949080
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  22949131 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 22949080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 22953087 - 22953036
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  22953087 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 22953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 23871575 - 23871524
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  23871575 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 23871524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 23875531 - 23875480
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  23875531 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 23875480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 18955853 - 18955897
Alignment:
Q  91 gttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18955853 gttgattatcatttgatattgttatatcttgagatgtttacgtgt 18955897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 25738540 - 25738457
Alignment:
Q  43 tatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| |||||  | |||||||||||||| ||||||||| | ||||| |||| ||||||||||||||    
T  25738540 tatatttgcaaatgcattatgtggattatgaatgatgtttaagttga-gttgattattaattgatattgtcatatcttgagatgt 25738457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 8243884 - 8243833
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  8243884 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 8243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 11566885 - 11566834
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  11566885 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 11566834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 12618927 - 12618978
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12618927 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12618978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 14472294 - 14472243
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  14472294 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 14472243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 18917349 - 18917400
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  18917349 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 18917400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 19870613 - 19870562
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  19870613 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 19870562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 22862969 - 22862918
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  22862969 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 22862918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 23395091 - 23395040
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  23395091 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 23395040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 23989943 - 23989892
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  23989943 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 23989892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 15875498 - 15875456
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  15875498 gatgttgattattatttgatgttgttatatcttgaggtgttta 15875456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 7429990 - 7429918
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||||||||| || ||||||||||| | |||||||||||||||| | |||| |||| ||| |||||    
T  7429990 atgcattatgtgaattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgggatgt 7429918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 21016261 - 21016186
Alignment:
Q  212 gggaatgccatcaatagaaagaacaagagtcttttcccaagacgaattaactttgtattctttcatcacccatatt 287  Q
    ||||||| |||||||||| | |  |||||||||   |||||||||||  ||||||||||||||||| |||||||||    
T  21016261 gggaatgtcatcaatagagaaagtaagagtcttagtccaagacgaatgtactttgtattctttcataacccatatt 21016186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 1644725 - 1644680
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||| |||||||||  ||||||||||| ||||    
T  1644725 tgttgattatcatttgatattgttatattctgagatgtttatgtgt 1644680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 12942393 - 12942356
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  12942393 gatgttgattaccatttgatgttgttatattttgagat 12942356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 14594210 - 14594282
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | |||||||||||||||| | |||| |||| ||| |||||    
T  14594210 atgcattatgtggattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgggatgt 14594282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 10034 - 10136
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10034 tagtaatgtaatatatttgtatatacattctgtgaattatataagatgtttaagatgatgttgattatcatttgatgttgttatatcttgagatgtttac 10133  T
Q  132 gtg 134  Q
    |||    
T  10134 gtg 10136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 36351 - 36253
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  36351 tagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgtcgttgattatcatttgatattgttatatcttgagatgttta 36253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 13881331 - 13881429
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  13881331 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctcaagatgttta 13881429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 27653172 - 27653270
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27653172 tagtaatgtattatatttgtatatgcattatgagaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 27653270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 48603621 - 48603521
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  48603621 gtaatgtaatatatttgtatatacattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttagatcttgagatgtttacgt 48603522  T
Q  134 g 134  Q
    |    
T  48603521 g 48603521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 22124456 - 22124358
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  22124456 tagtaatgtgatatagttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgttta 22124358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 20958279 - 20958181
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  20958279 tagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgtcatatcttgagatgttta 20958181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 41781542 - 41781636
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| |||||||    
T  41781542 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaag--gttgttgattatcatttgatgttgttatatcttgaaatgttta 41781636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 28312685 - 28312577
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||  |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  28312685 tagtaatgagatatatttgtatatacattatgtggattttataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgtttat 28312586  T
Q  132 gtgttgtct 140  Q
    ||| |||||    
T  28312585 gtgctgtct 28312577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 21043231 - 21043329
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  21043231 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatttttattatcatttgatattgttatatcttgagatgttta 21043329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 45574756 - 45574841
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  45574756 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgattatgatttgatgttcttatat 45574841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 52940827 - 52940923
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  52940827 tagtaatgtgatgtagttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattattatttggtattgttatatcttgagatgtt 52940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 20437942 - 20438041
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttt-aagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20437942 tagtaatgagatatatttgtatatgcattatgtggattatataagatgttttaagttgatgttgattatcatttgatattgttatatcttgaggtgttta 20438041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 14800690 - 14800602
Alignment:
Q  42 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  14800690 atatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgattattatttgatattgttatatcttgatatgttta 14800602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 14809564 - 14809476
Alignment:
Q  42 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  14809564 atatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgattattatttgatattgttatatcttgatatgttta 14809476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 22130780 - 22130858
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  22130780 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatg-tgattatgatttgatgttg 22130858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 16372141 - 16372070
Alignment:
Q  59 ttatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  16372141 ttatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 16372070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 48520679 - 48520586
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||| |||||||||    
T  48520679 taatgtgatatagttgtatatgcattatgtgaattatataagatgttttaagttgatgttgtttattatttgatattgttatatc-tgagatgtt 48520586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 21533827 - 21533908
Alignment:
Q  36 aatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||| ||||||||||    
T  21533827 aatgtgatatatttgtatatgcattatgtggattatataagatgtttaag-tgttgttgattattatttgatattgttatatc 21533908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 32649871 - 32649787
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32649871 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 32649787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 47190772 - 47190707
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatt 97  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47190772 tagtaatgtgatatagttgtatatgcattatgtaaattatataagatgtttaagttgatgttgatt 47190707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 16381346 - 16381256
Alignment:
Q  42 atatatttgtatatgcatt-atgtgaattatataagatgtttaa--gttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    ||||||||||||||||||| |||||||||||| || ||||||||  ||||||||||||||||||||||| |||||||||| |||| |||||    
T  16381346 atatatttgtatatgcattgatgtgaattatacaatatgtttaaatgttgatgttgattatcatttgatattgttatatcatgagttgttt 16381256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 20329181 - 20329118
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttg 94  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  20329181 tagtaatgtaatatatttgtatatgcattatgttaattatataagatgttttaagttgatgttg 20329118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 11945626 - 11945564
Alignment:
Q  33 agtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttga 95  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  11945626 agtaatgtaatatatttgtatatacattctgtgaattatataagatgtttaagttgctgttga 11945564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 635944 - 636022
Alignment:
Q  45 tatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||| ||| ||||||  ||||||||||||||    
T  635944 tatttgtatatgcattatgtgaattatataaaatgcttaagttgatgattgaatattatttgacattgttatatcttga 636022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 2332946 - 2333019
Alignment:
Q  54 atgcattatgtgaa-ttatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| | ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2332946 atgcattatgtggacttatataggatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 2333019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 1925212 - 1925263
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  1925212 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 1925263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 20924226 - 20924277
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  20924226 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 20924277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 23819381 - 23819432
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  23819381 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 23819432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 29534697 - 29534624
Alignment:
Q  54 atgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| |||| |||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  29534697 atgcattatgtggaattttatatgatgtttaagttg-tgttgattatcatttgatatcgttatatcttgagatgt 29534624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 51326906 - 51326855
Alignment:
Q  89 atgttgattatcatttgatgttgttatatcttgagatgtttacgtgttgtct 140  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  51326906 atgttgattattatttgatgttgttatatcttgagatgtttaggtgctgtct 51326855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 1010746 - 1010695
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  1010746 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 1010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 20228892 - 20228943
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  20228892 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 20228943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 21407378 - 21407327
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  21407378 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 21407327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 41049988 - 41050070
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| |||| || || || ||||||||  |||||||| ||||||||||    
T  41049988 taatgtgatatatttgtatatgcattacttgaattatatatgatg-ttgagatgttgttgatttgcatttgatattgttatatc 41050070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 50614068 - 50614151
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| |||||  |||||||||||||  ||||||||| ||||||||| || || ||||||||  |||||||| ||||||||||    
T  50614068 taatgtgatataaatgtatatgcattacatgaattataaaagatgtttgagatgttgttgatttgcatttgatattgttatatc 50614151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 50621896 - 50621979
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| |||||  |||||||||||||  ||||||||| ||||||||| || || ||||||||  |||||||| ||||||||||    
T  50621896 taatgtgatataaatgtatatgcattacatgaattataaaagatgtttgagatgttgttgatttgcatttgatattgttatatc 50621979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 43543243 - 43543201
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  43543243 gatgttgattattatttgatgttgttatatcttgaggtgttta 43543201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 50686781 - 50686698
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| |||||  |||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||  ||||||||||    
T  50686781 taatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgacattgttatatc 50686698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 52639564 - 52639513
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  52639564 agttgttgttgattatcattcgatattgttatatcctgagatgtttatgtgt 52639513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 16375541 - 16375593
Alignment:
Q  84 agttgatgttgattatcatttg-atgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||| || |||||||||| ||||||||||| ||||    
T  16375541 agttgttgttgattatcatttgaatattgttatatcctgagatgtttatgtgt 16375593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 8202 - 8097
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8202 tagtaatgtgatatagttgtatatgcattatgtgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttat 8103  T
Q  132 gtgttg 137  Q
    ||||||    
T  8102 gtgttg 8097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 17744 - 17641
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17744 tagtaatgtaatatatttgtatatgaattatgtgaattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 17645  T
Q  132 gtgt 135  Q
    ||||    
T  17644 gtgt 17641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 31294 - 31191
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  31294 tagtaatgtaatatatttgtatatgcattatgtgaattatatatgatgtttaagttgttgtttattatcatttgatattgttatatcttgagatgtttac 31195  T
Q  132 gtgt 135  Q
    ||||    
T  31194 gtgt 31191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 588 - 486
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  588 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgtttaagttaatgttaattatcatttgatattgttatatcttgagatgtttac 489  T
Q  132 gtg 134  Q
    |||    
T  488 gtg 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 21335 - 21239
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  21335 gtaatgtaatatatttgtatatgcattatgttaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgttta 21239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 15030 - 15117
Alignment:
Q  47 tttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15030 tttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcatttgatgttgttatatcttgagatgtttacgtg 15117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 710 - 808
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  710 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgtttaagttgttgttgattatcttttgatattgttatatcttgagatgttta 808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 1021 - 915
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgt 133  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||    
T  1021 gtaatgtaatatatttatatatgtattatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttatgt 922  T
Q  134 gttgtct 140  Q
    | |||||    
T  921 gctgtct 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 2065 - 1967
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2065 tagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 120176 - 120074
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  120176 taatgtaatatatttgtatatgcattatgtgaactatatcagatgtttaagttattgttgattatcatttgatattgttatatcttgagatgtttacgtg 120077  T
Q  135 ttg 137  Q
    |||    
T  120076 ttg 120074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 67431 - 67330
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  67431 tagtaatgtaatatatttttatatgcattatgtgaattgtataagatgtttaagttgatgttgattatcatttgatgttgttatatcttg-ggtgtttac 67333  T
Q  132 gtg 134  Q
    |||    
T  67332 gtg 67330  T

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Target: scaffold0293 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 17671 - 17575
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17671 gtaatgtgatatagttgtatatgccttatgtgaattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 17575  T

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Target: scaffold0293; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 20160 - 20263
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||||||||||| |||||||| |||||||||||||||  |||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||    
T  20160 tagtaatgtaatatatttttatatgcactatgtgaattatatataatgtttaagttgttgttgattagcatttgatattgttaaatcttgagatgtttac 20259  T
Q  132 gtgt 135  Q
    ||||    
T  20260 gtgt 20263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 6780 - 6684
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6780 gtaatgtaatatatttgtatatgtagtatgtgaattatataagatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgttta 6684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 110824 - 110726
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  110824 tagtaatgagatatatttgtatatgcattatgtggattatataagatgtttaagttgatattgattatcatttgatattgttatatcttgagatgttta 110726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 105251 - 105149
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  105251 tagtaatgtgatatatttgtatatgcattttttgaattatataagatgtttaatttgatgttaattatcatttgatattgttatatcttgagatgtttac 105152  T
Q  132 gtg 134  Q
    |||    
T  105151 gtg 105149  T

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Target: scaffold1439 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 354 - 269
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  354 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagctgatgttgattatgatttgatgttgttatat 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 3277 - 3362
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  3277 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttaatgttgattatcatttaatgttgttatat 3362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 12306 - 12221
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  12306 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttcaagttgatgttgattatgatttgatgttgttatat 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 133077 - 132989
Alignment:
Q  42 atatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  133077 atatatttgtatatgcattatgtggattatataagatgtttaagttgatgttgattatcatttgatattgttatatcttgaaatgttta 132989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 29372 - 29285
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||| |||||||||||||| |||||    
T  29372 tagtaatgtaatatatttgtatatgcattatgtgaagta---------tttaagatgatgttgattatcatttgatattgttatatcttgatatgtt 29285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 18117 - 18215
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  18117 tagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgtttattatcatttgatattgttatatcttgagatattta 18215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 818 - 713
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||     
T  818 tagtaatgtgatatagttgtatatgcattatgtggattatataagatgtttaagttgatgttgattattatttcatgatgtgatatcttgagatgtttat 719  T
Q  132 gtgttg 137  Q
    ||||||    
T  718 gtgttg 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 3128 - 3029
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  3128 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacattgttatatcttgagatgttta 3029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 55634 - 55733
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||    
T  55634 tagtaatgtgatatatttgcatatgcattatgtgaattatataagatgtttaagttgatgttgaaatattatttgatattgttatatcttgagatgttta 55733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 1110 - 1004
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  || |||||||||||||||||||    
T  1110 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacattcttatatcttgagatgttta 1011  T
Q  131 cgtgttg 137  Q
     ||||||    
T  1010 tgtgttg 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 75778 - 75880
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||| | |||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  75778 tagtaatgtgataaaattgtatttgcattatgtggattatatatgatgtttaagttgttgttgattatcatttgatattgttatatcttgagatgtttac 75877  T
Q  132 gtg 134  Q
    |||    
T  75878 gtg 75880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 221157 - 221254
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  221157 tagtaatgtgatatagttgtatatgcattatgtggattatataagac-tttaagttgatgttgattatcatttgatattgttatatcttgagatgttta 221254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 189460 - 189511
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  189460 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 189511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 198 - 121
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  198 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttaaagttgatgttgattatgatttgatgt 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 82324 - 82235
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcat----tatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatat 117  Q
    ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  82324 tagtaatgtaatatatttgtatatgcatgcattatgtgaattatataagatgtttaagttgatgttgattatgatttgatgttgttatat 82235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 80424 - 80469
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  80424 tgttgattatcatttgatattgttatatcttgagatgtttatgtgt 80469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 4039 - 3940
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttt-aagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||    
T  4039 tagtaatgagatatatttgtatatgcattatgtggattatataagatgttttaagttgatgttgattatcatttggtaatgttatatcttgagatgttta 3940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 10641 - 10539
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| ||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||    
T  10641 taatgtgatataattgtatacgcattacatgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttacatctagagatgtttatgtg 10542  T
Q  135 ttg 137  Q
    |||    
T  10541 ttg 10539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 10334 - 10236
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| || || |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||    
T  10334 tagtaatgtgatgtagttgtatatgcattatgtggattatataagatgtttaagttgatgatgattattatttgatattgttacatcttgagatgttta 10236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 29844 - 29747
Alignment:
Q  32 tagtaatgtaatatattt-gtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtt 128  Q
    |||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||    
T  29844 tagtaatgtaatatattttgtatgtgcattatgtgaagtatttaagatgtttaagttgatgttgattatcatttgatattgttatatctggatatgtt 29747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 206474 - 206570
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| ||||| || |||||||||| ||||||| |||||||||||||||||||||    
T  206474 tagtaatgtaatatatttgtatatgcattatgtggattatacaagatgattaag-tgttgttgattattatttgatattgttatatcttgagatgttt 206570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 11316 - 11201
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| ||||||||||||||| || |||||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||     
T  11316 tagtaatgtgatatagttgtatatgcattatttggattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcctgagatgtttat 11218  T
Q  132 gtgttgtctgtgctgct 148  Q
    ||| || ||||| ||||    
T  11217 gtgctgcctgtgttgct 11201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 22416 - 22301
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    ||||||||| ||||| ||||||||||||||| || |||||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||     
T  22416 tagtaatgtgatatagttgtatatgcattatatggattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcctgagatgtttat 22318  T
Q  132 gtgttgtctgtgctgct 148  Q
    ||| || ||||| ||||    
T  22317 gtgctgcctgtgttgct 22301  T

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Target: scaffold0639 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 7438 - 7537
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||| ||||||||||||||||||    
T  7438 tagtaatgtgatatatttgtgtatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacattgatatatcttgagatgttta 7537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 2620 - 2719
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  | | ||||||||||||||||||    
T  2620 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacatggatatatcttgagatgttta 2719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 9671 - 9765
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    ||||||||  ||||||||||||||||||| | || |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  9671 tagtaatgagatatatttgtatatgcattgtatggattatataagatgtttaagt-gatgttgattatcatttgatattgttatatcttgagatgt 9765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 29373 - 29472
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttg-attatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||| |||||    
T  29373 tagtaatgtgatatatttgcatatgtattatgtgaattatataagatgtttaagttgatgttgaaatattatttgatattgttatatcttgagaagttta 29472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 7601 - 7510
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||||    
T  7601 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacattgttatatcttga 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 14720 - 14629
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||  ||||||||||||||    
T  14720 tagtaatgtgatatatttgtatatgcattatgtgaattatataagatgcttaagttgatgattgattattatttgacattgttatatcttga 14629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 191 - 101
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagat 125  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||| || |||||||||||| |||||||||||||||||    
T  191 taatgtgatataattgtatatgcattatgtgaattttatatgatgtttaagttgatgatgtttatcatttgatattgttatatcttgagat 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 693 - 628
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  693 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 1279 - 1344
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1279 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 614 - 699
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatctt 120  Q
    |||||| ||||| ||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  614 taatgtgatataattgtatacgcattacatgaattatatatgatgtttaagttgatgttgattatcatttgatgttgttatatctt 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 8000 - 7900
Alignment:
Q  37 atgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||| ||||||||||| ||||    
T  8000 atgtaatatatttgtgtatggattatgtgaattatataagatgttttaagttgatgttgcttattatttgatattgttatatc-tgagatgtttatgtgt 7902  T
Q  136 tg 137  Q
    ||    
T  7901 tg 7900  T

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Target: scaffold0106 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 15225 - 15290
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15225 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 15290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 19599 - 19693
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataaga-tgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||  |||||  ||||||||| |||||||||||    
T  19599 taatgtgatatatttgtatatgcattatgtgaattatatgagattttttaagttgatgttgattattgtttgacattgttatat-ttgagatgttt 19693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 4256 - 4324
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4256 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgatatgtttacgtgttg 4324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 22449 - 22361
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  || ||| |||||||||||    
T  22449 tagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgattattcttggatattgttatatct 22361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 14070 - 14158
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatg-tttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  || ||| |||||||||||    
T  14070 tagtaatgtaatatatttgtatatgcattatgtgaattatatgagatgttttaagttgatgttgattattcttggatattgttatatct 14158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 1868 - 1785
Alignment:
Q  37 atgtaatatatttgtatatgcattatgtgaattat-ataagatgtttaagttgatgttgattatcatttgatgttgttatatct 119  Q
    |||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||    
T  1868 atgtgatatatttgtatatgcattatgtgaattattataaggagtttaagttgatgttgattatcatttgatattgttatatct 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 30503 - 30404
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatg-ttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| || |||||||| ||||||  ||||||| ||||||||||||||    
T  30503 tagtaatgtgatatatttgtatatgcattatgtgaattatataaaatgcttaagttgttgattgattattatttgacattgttatgtcttgagatgttta 30404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 15131 - 15069
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15131 tatatatgatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 15069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 4646 - 4752
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttac 131  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||||| || |||||||||| |||| || |||||||| || ||||| |     
T  4646 tagtaatgtaatatatttgtatatgcattatgtgaattatttgaaatgtttaagttgttgatgattatcatatgatattattatatctggatatgttaat 4745  T
Q  132 gtgttgt 138  Q
    |||||||    
T  4746 gtgttgt 4752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 16868 - 16957
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||||| ||||||||||||||    
T  16868 tagtaatgtgatataattgtatatgcattatgtgaattatataagatgttcaagttgttgttgattgtca-ttgatattgttatatcttga 16957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 26028 - 26117
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| ||  ||||| ||||||||||||||    
T  26028 tagtaatgtgatataattgtatatgcattatgtgaattatataagatgttcaagttgttgttgattgtc-cttgatattgttatatcttga 26117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 53825 - 53890
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53825 tatatatgatgtttaagtagatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 53890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 128922 - 129005
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| |||||||||||||| |||||  ||||||||||| ||||||| || || ||||||||  |||||||| ||||||||||    
T  128922 taatgtgatatatttgtatatccattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatc 129005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 6203 - 6116
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||||||||| | || |||||||||||| ||||||||||||||    
T  6203 taatgtgatataattgtatatgcattatgtgaattttatatgatgtttaagttgaggatgtttatcatttgatattgttatatcttga 6116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 85713 - 85618
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttta 130  Q
    |||||| ||||| | ||||| ||||||  ||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  85713 taatgtgatataatcgtatacgcattacatgaattatatatgatgcttaagttgatgttgattattatttgatgttgttatatcttgaggtgttta 85618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 6932 - 6993
Alignment:
Q  73 taagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6932 taagttgtttaagttgatgttgattatcatttaatgttgttatatcttgagatgtttacgtg 6993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 6889 - 6954
Alignment:
Q  69 tatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtg 134  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  6889 tatatatgatgtttaagttgatgttgagtatcatttaatgttgttatatcttgagatgtttacgtg 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 48487 - 48403
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  48487 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 48403  T

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Target: scaffold0021 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 146345 - 146261
Alignment:
Q  43 tatatttgtatatgcattatgtg-aattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  146345 tatatttgcaaatgcattatgtggaattatatatgatgtttaagttg-tgttgattatcatttgatattgttatatcttgagatgt 146261  T

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Target: scaffold0708 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 2376 - 2444
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatc 100  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  2376 tagtaatttaatatatttgtatatgcattatgtgaattatttaagatgtttaagttgtagttgattatc 2444  T

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Target: scaffold0072 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 57987 - 57898
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttga 122  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||| ||||| |||||| |||||||| ||| ||||| ||||||||||||||    
T  57987 tagtaatgtgatataattgtatatgcattatgtgaattatttaaaatgttcaagttgttgttgattgtca-ttgatattgttatatcttga 57898  T

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Target: scaffold0750 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 3766 - 3701
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatt 97  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||    
T  3766 tagtaatgtaatatatttgtatatgtattatgtggattatataagatgtttaagtgaatgttgatt 3701  T

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Target: scaffold0004 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 332485 - 332423
Alignment:
Q  33 agtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttga 95  Q
    |||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  332485 agtaatgtgatatatttgtatatgcattatgtgaattataaattatgtttaagttgatgttga 332423  T

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Target: scaffold0415 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 418 - 367
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  418 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 11584 - 11635
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  11584 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 11635  T

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Target: scaffold0157 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 32743 - 32794
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  32743 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 32794  T

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Target: scaffold0109 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 36025 - 36076
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  36025 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 36076  T

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Target: scaffold0031 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 36169 - 36220
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  36169 agttgttgttgattatcatttgatattgttatatcttgagatgtttacgtgt 36220  T

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Target: scaffold0006 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 97175 - 97092
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| ||||||||||    
T  97175 taatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatc 97092  T

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Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 106453 - 106370
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||||||||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| ||||||||||    
T  106453 taatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatc 106370  T

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Target: scaffold0108 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 3385 - 3323
Alignment:
Q  75 agatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||    
T  3385 agatgtttcagttgatgttgattgtcatttgatattgttatatcttgagatatttatgtgttg 3323  T

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Target: scaffold0544 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 2442 - 2493
Alignment:
Q  32 tagtaatgtaatatatttgtatatgcattatgtgaattatataagatgttta 83  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  2442 tagtaatgagatatatttgtatatgcattatgtggattatataagatgttta 2493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 13450 - 13502
Alignment:
Q  34 gtaatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttg 88  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  13450 gtaatgtaatatatttgtat--gcattatctgaattatataagatgtttaagttg 13502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 14170 - 14221
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  14170 agttgttgttgattatcatttgatattgttatatcttgatatgtttacgtgt 14221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 58802 - 58853
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  58802 agttgttgttgattatcatttgatattgttatatcttgagatgtttatgtgt 58853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 2802 - 2737
Alignment:
Q  64 tgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||||| |||||||||||||||| |||||||||||| ||||| || |||||||| || ||||||    
T  2802 tgaattatttaagatgtttaagttgttgttgattatcacttgatattattatatctggatatgttt 2737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 16052 - 16136
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataag-atgtttaagttgatgttgattatcatttgatgttgttatatc 118  Q
    |||||| ||||| ||||||||||||||  ||||||||||||| |||||| || || ||||||||  |||||||| ||||||||||    
T  16052 taatgtgatataattgtatatgcattacttgaattatataagaatgtttgagatgttgttgatttacatttgatattgttatatc 16136  T

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Target: scaffold0676 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 473 - 422
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  473 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 3958 - 4009
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  3958 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 4009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 5184 - 5235
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  5184 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 5235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 12445 - 12394
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  12445 agttgttgttgattatcatttgatattgttatatcctgagatgtttatgtgt 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 65611 - 65662
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  65611 agttgttgttgattatcgtttgatattgttatatcctgagatgtttacgtgt 65662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 61695 - 61746
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  61695 agttgttgttgattatcattagatattgttatatcctgagatgtttatgtgt 61746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 80738 - 80687
Alignment:
Q  84 agttgatgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    ||||| ||||||||||||||| || |||||||||| ||||||||||| ||||    
T  80738 agttgttgttgattatcatttaatattgttatatcctgagatgtttatgtgt 80687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 6235 - 6329
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||  |||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| |||| ||||| |||| |||||    
T  6235 taatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttt 6329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 38486 - 38392
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||| |||||||||||||  ||||||||||| ||||||| || || |||||| |  |||||||| |||| ||||| |||| |||||    
T  38486 taatgtgatatatatgtatatgcattacatgaattatatatgatgtttgagatgttgttgaattgcatttgatattgtcatatcatgagctgttt 38392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 18190 - 18284
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgttt 129  Q
    |||||| |||||  |||||||||||||  ||||||||||| ||||||| || || ||||||||  |||||||| |||| ||||| |||| |||||    
T  18190 taatgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttt 18284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 1620 - 1583
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1620 gatgttgattaccatttgatgttgttatatcttgagat 1583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 3215 - 3178
Alignment:
Q  88 gatgttgattatcatttgatgttgttatatcttgagat 125  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  3215 gatgttgattaccatttgatgttgttatatcttgagat 3178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 207591 - 207636
Alignment:
Q  90 tgttgattatcatttgatgttgttatatcttgagatgtttacgtgt 135  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||    
T  207591 tgttgattatcatttgatattgttatatcttgatatgtttatgtgt 207636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 10858 - 10906
Alignment:
Q  89 atgttgattatcatttgatgttgttatatcttgagatgtttacgtgttg 137  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| ||||||    
T  10858 atgttgagtattatttgatgttgttatatcttgaggtgtttaagtgttg 10906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 25275 - 25213
Alignment:
Q  35 taatgtaatatatttgtatatgcattatgtgaattatataagatgtttaagttgatgttgatt 97  Q
    |||||| |||||||||||||| |||||  ||||||||||| ||||||| || || ||||||||    
T  25275 taatgtgatatatttgtatatacattacatgaattatatatgatgtttgagatgttgttgatt 25213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 16541 - 16613
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | |||||||||||||||| | |||| |||| ||| |||||    
T  16541 atgcattatgtggattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgggatgt 16613  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 209073 - 209001
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | |||||||||||||||| | |||| |||| ||| |||||    
T  209073 atgcattatgtggattatgtatgatgtttaagtag-tgttgattatcatttggtattgtcatattttgggatgt 209001  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 163071 - 163143
Alignment:
Q  54 atgcattatgtgaattatataagatgtttaagttgatgttgattatcatttgatgttgttatatcttgagatgt 127  Q
    |||||||||||| ||||| || ||||||||||| | ||| |||||||||||| | |||| |||| |||||||||    
T  163071 atgcattatgtggattatgtatgatgtttaagtag-tgtagattatcatttggtattgtcatattttgagatgt 163143  T

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