View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1240_low_82 (Length: 245)
Name: NF1240_low_82
Description: NF1240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1240_low_82 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 44598830 - 44598937
Alignment:
| Q |
138 |
cctaatacccaattgaagattaagaatcaaatcatagttcttatgtcccttacaaacagtataacccggtttcttaacatctccatcaatcgaataataa |
237 |
Q |
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| T |
44598830 |
cctaatacccaattgaagattaagaatcaaatcatagttcttatgtcccttacaaacagtataacccggtttcttaacatctccatcaatcgaataataa |
44598929 |
T |
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| Q |
238 |
caaggact |
245 |
Q |
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|||||||| |
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| T |
44598930 |
caaggact |
44598937 |
T |
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