View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1240_low_87 (Length: 208)

Name: NF1240_low_87
Description: NF1240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1240_low_87
NF1240_low_87
[»] chr1 (27 HSPs)
chr1 (2-126)||(10782826-10782950)
chr1 (1-55)||(22031768-22031822)
chr1 (1-55)||(4882029-4882083)
chr1 (1-55)||(44517563-44517617)
chr1 (2-55)||(29205684-29205737)
chr1 (3-52)||(38646980-38647029)
chr1 (1-53)||(13488190-13488242)
chr1 (1-53)||(25032757-25032809)
chr1 (12-55)||(12872032-12872075)
chr1 (12-55)||(13152853-13152896)
chr1 (5-55)||(12967399-12967449)
chr1 (1-55)||(16141026-16141080)
chr1 (1-55)||(28677791-28677845)
chr1 (1-55)||(37822015-37822069)
chr1 (3-53)||(49652231-49652281)
chr1 (1-55)||(51418399-51418453)
chr1 (3-52)||(15276115-15276164)
chr1 (3-52)||(22344581-22344630)
chr1 (2-55)||(42491285-42491338)
chr1 (3-43)||(630462-630502)
chr1 (11-55)||(26199984-26200028)
chr1 (1-53)||(26771500-26771552)
chr1 (3-43)||(27469386-27469426)
chr1 (1-53)||(33486690-33486742)
chr1 (11-55)||(34659307-34659351)
chr1 (3-55)||(44562415-44562467)
chr1 (11-55)||(46589552-46589596)
[»] chr8 (22 HSPs)
chr8 (1-55)||(2234130-2234184)
chr8 (1-55)||(31202863-31202917)
chr8 (1-53)||(41362148-41362200)
chr8 (1-55)||(24790830-24790884)
chr8 (2-55)||(5457466-5457519)
chr8 (1-53)||(2968930-2968982)
chr8 (1-52)||(1809901-1809952)
chr8 (1-56)||(8054473-8054528)
chr8 (12-55)||(9627855-9627898)
chr8 (1-44)||(11162301-11162344)
chr8 (1-55)||(2024884-2024938)
chr8 (1-55)||(9501983-9502037)
chr8 (7-53)||(9799679-9799725)
chr8 (5-55)||(31712740-31712790)
chr8 (1-55)||(37613051-37613105)
chr8 (1-55)||(43936840-43936894)
chr8 (3-52)||(9993062-9993111)
chr8 (3-52)||(31874460-31874509)
chr8 (3-52)||(44295712-44295761)
chr8 (7-55)||(23767139-23767187)
chr8 (3-55)||(32104503-32104555)
chr8 (3-55)||(41996939-41996991)
[»] chr7 (28 HSPs)
chr7 (1-55)||(37593498-37593552)
chr7 (2-55)||(2623008-2623061)
chr7 (2-55)||(44482530-44482583)
chr7 (1-55)||(21603873-21603927)
chr7 (1-55)||(21991077-21991131)
chr7 (2-55)||(26017324-26017377)
chr7 (1-53)||(1280791-1280843)
chr7 (11-55)||(4621032-4621076)
chr7 (1-53)||(11833433-11833485)
chr7 (1-53)||(15674017-15674069)
chr7 (11-55)||(48643478-48643522)
chr7 (2-53)||(36578995-36579046)
chr7 (12-55)||(38277223-38277266)
chr7 (1-55)||(6667810-6667864)
chr7 (1-55)||(9785732-9785786)
chr7 (2-52)||(10574781-10574831)
chr7 (7-53)||(15670464-15670510)
chr7 (1-55)||(24533551-24533605)
chr7 (3-53)||(30992492-30992542)
chr7 (12-54)||(37375709-37375751)
chr7 (1-55)||(39707683-39707737)
chr7 (1-55)||(46025707-46025761)
chr7 (1-55)||(48304044-48304098)
chr7 (3-52)||(134814-134863)
chr7 (2-55)||(9137808-9137861)
chr7 (12-52)||(8180227-8180267)
chr7 (1-53)||(24319877-24319929)
chr7 (11-55)||(34893511-34893555)
[»] chr6 (19 HSPs)
chr6 (1-55)||(5146341-5146395)
chr6 (2-54)||(5527301-5527353)
chr6 (1-55)||(4660843-4660897)
chr6 (1-55)||(12653970-12654024)
chr6 (1-55)||(19402504-19402558)
chr6 (1-55)||(21507506-21507560)
chr6 (1-55)||(23654664-23654718)
chr6 (1-55)||(30813472-30813526)
chr6 (2-55)||(15589777-15589830)
chr6 (3-56)||(19760184-19760237)
chr6 (11-55)||(6127942-6127986)
chr6 (1-55)||(1106515-1106569)
chr6 (1-55)||(12481031-12481085)
chr6 (1-55)||(14782807-14782861)
chr6 (1-55)||(31705580-31705634)
chr6 (1-55)||(35219565-35219619)
chr6 (3-52)||(548541-548590)
chr6 (3-55)||(23843090-23843142)
chr6 (12-56)||(31936284-31936328)
[»] chr5 (24 HSPs)
chr5 (1-55)||(42505065-42505119)
chr5 (1-55)||(6681529-6681583)
chr5 (1-55)||(17331743-17331797)
chr5 (1-55)||(20483601-20483655)
chr5 (1-55)||(23881768-23881822)
chr5 (1-55)||(33164121-33164175)
chr5 (1-55)||(34431479-34431533)
chr5 (2-55)||(9196683-9196736)
chr5 (3-52)||(10923803-10923852)
chr5 (3-52)||(35906665-35906714)
chr5 (2-55)||(39531060-39531113)
chr5 (3-55)||(5378698-5378750)
chr5 (1-43)||(177768-177810)
chr5 (1-55)||(11734497-11734551)
chr5 (1-55)||(17095893-17095947)
chr5 (10-44)||(26877913-26877947)
chr5 (1-55)||(39179497-39179551)
chr5 (2-55)||(6635664-6635717)
chr5 (3-52)||(31646225-31646274)
chr5 (11-55)||(586165-586209)
chr5 (12-52)||(3740758-3740798)
chr5 (3-55)||(4726669-4726721)
chr5 (11-55)||(40775165-40775209)
chr5 (3-43)||(41358430-41358470)
[»] chr3 (23 HSPs)
chr3 (1-55)||(14585877-14585931)
chr3 (7-55)||(19645611-19645659)
chr3 (5-53)||(50981128-50981176)
chr3 (5-53)||(51084262-51084310)
chr3 (1-52)||(1074557-1074608)
chr3 (1-55)||(11819499-11819553)
chr3 (1-55)||(13701662-13701716)
chr3 (1-55)||(24483356-24483410)
chr3 (1-55)||(55090359-55090413)
chr3 (2-55)||(49627764-49627817)
chr3 (1-53)||(2192493-2192545)
chr3 (11-55)||(22844456-22844500)
chr3 (1-40)||(1806140-1806179)
chr3 (2-53)||(48401508-48401559)
chr3 (12-55)||(55455288-55455331)
chr3 (1-55)||(33637809-33637863)
chr3 (1-55)||(53155090-53155144)
chr3 (11-53)||(54706394-54706436)
chr3 (2-55)||(25111829-25111882)
chr3 (3-52)||(43030079-43030128)
chr3 (1-53)||(21084401-21084453)
chr3 (11-55)||(36623923-36623967)
chr3 (3-43)||(43839195-43839235)
[»] chr2 (36 HSPs)
chr2 (1-55)||(16136493-16136547)
chr2 (1-55)||(34416415-34416469)
chr2 (1-55)||(43696283-43696337)
chr2 (12-55)||(27096115-27096158)
chr2 (1-56)||(33012463-33012518)
chr2 (1-55)||(3527401-3527455)
chr2 (1-55)||(13878661-13878715)
chr2 (1-55)||(14018786-14018840)
chr2 (1-55)||(20560785-20560839)
chr2 (1-55)||(25068256-25068310)
chr2 (1-55)||(29543208-29543262)
chr2 (2-52)||(31908472-31908522)
chr2 (1-55)||(32015668-32015722)
chr2 (1-55)||(34471371-34471425)
chr2 (1-55)||(35333920-35333974)
chr2 (2-55)||(36868424-36868477)
chr2 (7-55)||(11550332-11550380)
chr2 (1-52)||(5754697-5754748)
chr2 (1-52)||(44942701-44942752)
chr2 (3-53)||(3390819-3390869)
chr2 (1-55)||(4732477-4732531)
chr2 (1-55)||(4739744-4739798)
chr2 (5-55)||(4878400-4878450)
chr2 (1-55)||(12890769-12890823)
chr2 (1-55)||(15920268-15920322)
chr2 (1-55)||(18089064-18089118)
chr2 (1-55)||(32314840-32314894)
chr2 (2-51)||(10286670-10286719)
chr2 (3-52)||(25771841-25771890)
chr2 (1-54)||(28261558-28261611)
chr2 (3-55)||(11931268-11931320)
chr2 (1-53)||(12705101-12705153)
chr2 (2-54)||(16379761-16379813)
chr2 (11-55)||(18141147-18141191)
chr2 (1-53)||(34962649-34962701)
chr2 (7-55)||(37884053-37884101)
[»] chr4 (28 HSPs)
chr4 (3-55)||(38434994-38435046)
chr4 (1-57)||(45350720-45350776)
chr4 (1-57)||(45360199-45360255)
chr4 (1-55)||(6912095-6912149)
chr4 (1-55)||(13965958-13966012)
chr4 (1-55)||(24826054-24826108)
chr4 (1-55)||(42197968-42198022)
chr4 (11-55)||(7084367-7084411)
chr4 (7-55)||(11209965-11210013)
chr4 (11-55)||(14346835-14346879)
chr4 (3-55)||(44374941-44374993)
chr4 (1-56)||(393925-393980)
chr4 (12-55)||(8517111-8517154)
chr4 (1-55)||(6882359-6882413)
chr4 (1-55)||(18502494-18502548)
chr4 (1-55)||(24100548-24100602)
chr4 (1-51)||(31522361-31522411)
chr4 (13-55)||(43244033-43244075)
chr4 (1-55)||(55600198-55600252)
chr4 (1-55)||(56236483-56236537)
chr4 (3-52)||(4634679-4634728)
chr4 (12-53)||(7060740-7060781)
chr4 (3-52)||(9662249-9662298)
chr4 (2-55)||(20887409-20887462)
chr4 (1-53)||(28837470-28837522)
chr4 (7-55)||(29473994-29474042)
chr4 (7-55)||(41837735-41837783)
chr4 (3-55)||(46716560-46716612)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-55)||(35490-35544)
[»] scaffold0536 (1 HSPs)
scaffold0536 (2-55)||(3311-3364)
[»] scaffold0722 (1 HSPs)
scaffold0722 (1-55)||(5192-5246)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-55)||(3719-3773)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-55)||(403900-403954)
[»] scaffold0603 (1 HSPs)
scaffold0603 (9-53)||(7977-8021)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-53)||(2102-2154)
[»] scaffold0288 (1 HSPs)
scaffold0288 (11-55)||(21018-21062)


Alignment Details
Target: chr1 (Bit Score: 92; Significance: 7e-45; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 10782826 - 10782950
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgtttnnnnnnntagatagtaactctatgtctctatctcgcgaaccacg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||| |||||||    
T  10782826 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgtttaaaaaaatagatagtaactctatgtctctatctcgcaaaccacg 10782925  T
Q  102 atagacgttgtccaatcagtattat 126  Q
    |||||| ||||||||||| ||||||    
T  10782926 atagacattgtccaatcaatattat 10782950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22031822 - 22031768
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  22031822 gtattgtattgatgtactctatcaatttgaatgaatgaatatcaattatttttgt 22031768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4882083 - 4882029
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  4882083 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 4882029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44517563 - 44517617
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  44517563 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 44517617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 29205684 - 29205737
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  29205684 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 29205737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 38646980 - 38647029
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  38646980 attatattgatgtactctatcaatttgaatgaatgaatatcatttatttt 38647029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13488242 - 13488190
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| ||||||||||||||| |||||||||    
T  13488242 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcaattattttt 13488190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25032809 - 25032757
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  25032809 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 25032757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 12872032 - 12872075
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||    
T  12872032 atgtactctatcaatttgaatgaatgaatatcgtttatttttgt 12872075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 13152853 - 13152896
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||    
T  13152853 atgtactctatcaatttgaatgaatgaatatcgtttatttttgt 13152896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 12967449 - 12967399
Alignment:
Q  5 tatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  12967449 tatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 12967399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16141026 - 16141080
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| | |||||||||||||| ||||||||||    
T  16141026 gtattgtatcgatgtactctatcaatttggatgaatgaatatcgtttatttttgt 16141080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28677845 - 28677791
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  28677845 gtattgtatcgatgtactctatcaatttgaataaatgaatatcgtttatttttgt 28677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37822069 - 37822015
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| || ||||||||||||| ||||||||||    
T  37822069 gtattgtatcgatgtactctatcaatttgagtgaatgaatatcgtttatttttgt 37822015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 49652231 - 49652281
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||||||||    
T  49652231 attatatcgatgtactctatcaatttgaatgaatgaatatcatttattttt 49652281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 51418399 - 51418453
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| |||||||  ||||||||||||||| ||| ||||||    
T  51418399 gtattatatcgatgtactctatcaatttaaatgaatgaatatcgtttacttttgt 51418453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 15276164 - 15276115
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  15276164 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 15276115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 22344630 - 22344581
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  22344630 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 22344581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42491285 - 42491338
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| |||||||||||||| | ||||||||||    
T  42491285 tattgtatcgatgtactctatcaatttgaatgaatgaatattgtttatttttgt 42491338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 630502 - 630462
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatc 43  Q
    ||||||| ||||||||| ||||||| |||||||||||||||    
T  630502 attatatcgatgtactctatcaatttgaatgaatgaatatc 630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 26199984 - 26200028
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  26199984 gatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 26200028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26771500 - 26771552
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||  ||||||||    
T  26771500 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttattttt 26771552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 27469426 - 27469386
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatc 43  Q
    ||||||||||||||||| || |||| |||||||||||||||    
T  27469426 attatattgatgtactctattaatttgaatgaatgaatatc 27469386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33486742 - 33486690
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| || |||||    
T  33486742 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttttttttt 33486690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 34659351 - 34659307
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  34659351 gatgtactctatcaatttgaatgaatgaatatcatttatttttgt 34659307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 44562467 - 44562415
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| ||||||| || ||||||||||||  ||||||||||    
T  44562467 attatatcgatgtactctatcaatttgactgaatgaatatcatttatttttgt 44562415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 46589552 - 46589596
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  46589552 gatgtactctatcaatttgaatgaatgaatatcatttatttttgt 46589596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2234184 - 2234130
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  2234184 gtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 2234130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31202863 - 31202917
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  31202863 gtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 31202917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41362148 - 41362200
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  41362148 gtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 41362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24790884 - 24790830
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  24790884 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 24790830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 5457466 - 5457519
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  5457466 tattatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 5457519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2968930 - 2968982
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  2968930 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2968982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1809952 - 1809901
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| |||||||    
T  1809952 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttt 1809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8054528 - 8054473
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgtt 56  Q
    ||||||||| |||||| || ||||||| |||||||||||||||  |||||||||||    
T  8054528 gtattatatcgatgtattctatcaatttgaatgaatgaatatcatttatttttgtt 8054473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 9627855 - 9627898
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  9627855 atgtactctatcaattcgaaagaatgaatattgattatttttgt 9627898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11162301 - 11162344
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcg 44  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||    
T  11162301 gtattgtatcgatgtactccatcaatttgaatgaatgaatatcg 11162344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2024938 - 2024884
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| ||||||| |||||||||||||| | ||| ||||||    
T  2024938 gtattatatcgatgtactctatcaatttgaatgaatgaatattgtttacttttgt 2024884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9501983 - 9502037
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  9501983 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgt 9502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 9799725 - 9799679
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||||||| ||||||| |||||||||||||||  ||||||||    
T  9799725 tattgatgtactctatcaatttgaatgaatgaatatcatttattttt 9799679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 31712790 - 31712740
Alignment:
Q  5 tatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  31712790 tatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 31712740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37613051 - 37613105
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||| ||||| ||||||| |||||||||||||||| ||||||||||    
T  37613051 gtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttatttttgt 37613105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43936894 - 43936840
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||| ||||| |||||||||||||||| ||||||| ||||||||||    
T  43936894 gtattgtatcgatctactctatcaattcgaatgaataaatatcgtttatttttgt 43936840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 9993062 - 9993111
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  9993062 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 9993111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 31874460 - 31874509
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  31874460 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 31874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 44295712 - 44295761
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  44295712 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 44295761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 23767139 - 23767187
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||| || |||| |||||||||||||| | ||||||||||    
T  23767139 tattgatgtactctattaatttgaatgaatgaatattgtttatttttgt 23767187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 32104555 - 32104503
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| ||||||| ||||||||||||||   ||||||||||    
T  32104555 attatatcgatgtactctatcaatttgaatgaatgaatataatttatttttgt 32104503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 41996939 - 41996991
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| |||||||  ||||||||||||||  ||||||||||    
T  41996939 attatatcgatgtactcgatcaatttaaatgaatgaatatcatttatttttgt 41996991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37593498 - 37593552
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  37593498 gtattgtatcgatgtactccatcaatttgaatgaatgaatatcgtttatttttgt 37593552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 2623008 - 2623061
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  2623008 tattatatagatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 2623061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 44482583 - 44482530
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  44482583 tattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 44482530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21603873 - 21603927
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||| | ||||||||    
T  21603873 gtattgtattgatgtactctatcaatttgaatgaatgaatatcgttaatttttgt 21603927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21991077 - 21991131
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  21991077 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 21991131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 26017377 - 26017324
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  26017377 tattatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 26017324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1280843 - 1280791
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||| ||||||||| ||||||| |||| ||||||||||| ||||||||    
T  1280843 gtattatatcgatgtactctatcaatttgaataaatgaatatcgtttattttt 1280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 4621076 - 4621032
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  4621076 gatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 4621032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11833433 - 11833485
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  11833433 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 11833485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15674069 - 15674017
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  15674069 gtattttatcgatgtactcaatcaatttgaatgaatgaatatcgcttattttt 15674017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 48643522 - 48643478
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  48643522 gatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 48643478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 36579046 - 36578995
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||| |||||||| ||||||| ||| |||||||||||| ||||||||    
T  36579046 tattatattaatgtactctatcaatttgaacgaatgaatatcgtttattttt 36578995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 38277223 - 38277266
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||    
T  38277223 atgtactctatcaatttgaatgaatgaatatcgtttatttttgt 38277266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6667810 - 6667864
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||| ||| ||||||| |||||||||||||||| ||||||||||    
T  6667810 gtattgtatcgatgtgctctatcaatttgaatgaatgaatatcgtttatttttgt 6667864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9785732 - 9785786
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||| | ||||||| |||||||||||||||| ||||||||||    
T  9785732 gtattgtatcgatgtaccctatcaatttgaatgaatgaatatcgtttatttttgt 9785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 10574781 - 10574831
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    |||| ||||||||||||| ||||||| |||||||||||||||  |||||||    
T  10574781 tattgtattgatgtactctatcaatttgaatgaatgaatatcatttatttt 10574831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 15670510 - 15670464
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  15670510 tattgatatactcaatcaatttgaatgaatgaatatcgtttattttt 15670464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24533605 - 24533551
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||||||||| ||||||| || ||||| ||||||  ||||||||||    
T  24533605 gtattatattgatgtactctatcaatttgattgaataaatatcttttatttttgt 24533551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 30992542 - 30992492
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||||||||    
T  30992542 attatatcgatgtactctatcaatttgaatgaatgaatatcatttattttt 30992492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 37375751 - 37375709
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttg 54  Q
    |||||||| ||||||| |||||||||||||||| |||||||||    
T  37375751 atgtactctatcaatttgaatgaatgaatatcgtttatttttg 37375709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39707683 - 39707737
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| |||||||  |||| ||||||| |||||||||||||||| ||||||||||    
T  39707683 gtattgtattgatccactctatcaatttgaatgaatgaatatcgtttatttttgt 39707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46025761 - 46025707
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  46025761 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 46025707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48304098 - 48304044
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  48304098 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 48304044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 134863 - 134814
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  134863 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 134814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 9137808 - 9137861
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| |||||||||||| ||||||| |||||||| ||||||  ||||||||||    
T  9137808 tattaaattgatgtactctatcaatttgaatgaataaatatcttttatttttgt 9137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 8180227 - 8180267
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  8180227 atgtactctatcaatttgaatgaatgaatatcgtttatttt 8180267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24319929 - 24319877
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| |||||||  ||||||||||||||| ||||||||    
T  24319929 gtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttattttt 24319877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 34893511 - 34893555
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  34893511 gatgtactctatcaatttgaatgaatgaatatcatttatttttgt 34893555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5146341 - 5146395
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  5146341 gtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 5146395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 5527353 - 5527301
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttg 54  Q
    |||| ||||||||||||| |||||||||||||||||||||||  |||||||||    
T  5527353 tattgtattgatgtactctatcaattcgaatgaatgaatatcatttatttttg 5527301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4660843 - 4660897
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  4660843 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 4660897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12654024 - 12653970
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  12654024 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 12653970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19402558 - 19402504
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  19402558 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 19402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21507560 - 21507506
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| |||| || |||||||||||||||| ||||||||||    
T  21507560 gtattgtattgatgtactctatcagtttgaatgaatgaatatcgtttatttttgt 21507506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23654664 - 23654718
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  23654664 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 23654718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30813472 - 30813526
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  30813472 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 30813526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 15589830 - 15589777
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  15589830 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 15589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 19760184 - 19760237
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgtt 56  Q
    ||||||| ||||||||| ||||||| || |||||||||||| ||||||||||||    
T  19760184 attatatcgatgtactctatcaatttgagtgaatgaatatcaattatttttgtt 19760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 6127942 - 6127986
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  6127942 gatgtactctatcaatttgaatgaatgaatatcgcttatttttgt 6127986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1106569 - 1106515
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||  |||||||||||||||| ||||||||||    
T  1106569 gtattgtatcgatgtactctatcaatctgaatgaatgaatatcgtttatttttgt 1106515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12481085 - 12481031
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  12481085 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 12481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14782861 - 14782807
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||| |||||||| |||||||||||    
T  14782861 gtattgtatcgatgtactctatcaatttgaatgactgaatatctattatttttgt 14782807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31705580 - 31705634
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| |||||||  ||||||||||||||| ||||||||||    
T  31705580 gtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgt 31705634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35219619 - 35219565
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| | ||||| |||||||||||||||| ||||||||||    
T  35219619 gtattgtatcgatgtactctaccaatttgaatgaatgaatatcgtttatttttgt 35219565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 548590 - 548541
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||||||||||||| ||||||| |||| ||||||||||  |||||||    
T  548590 attatattgatgtactctatcaatttgaatcaatgaatatcatttatttt 548541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 23843142 - 23843090
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| ||||||| ||||||||||||||   ||||||||||    
T  23843142 attatatggatgtactctatcaatttgaatgaatgaatattatttatttttgt 23843090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 31936328 - 31936284
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgtt 56  Q
    |||||||| ||||||| ||||||| |||||||| |||||||||||    
T  31936328 atgtactctatcaatttgaatgaacgaatatcgtttatttttgtt 31936284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42505119 - 42505065
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  42505119 gtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 42505065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6681583 - 6681529
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  6681583 gtattgtatcgatgtactctatcaattagaatgaatgaatatcgtttatttttgt 6681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17331743 - 17331797
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  17331743 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 17331797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20483601 - 20483655
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| || |||| |||||||||||||||| ||||||||||    
T  20483601 gtattatatcgatgtactctattaatttgaatgaatgaatatcgtttatttttgt 20483655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23881822 - 23881768
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  23881822 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 23881768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33164175 - 33164121
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| |||||||||  |||||| |||||||||||||||| ||||||||||    
T  33164175 gtattatatcgatgtactctgtcaatttgaatgaatgaatatcgtttatttttgt 33164121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34431479 - 34431533
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  34431479 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 34431533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 9196736 - 9196683
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||  |||||||| ||||||| |||||||||||||||| ||||||||||    
T  9196736 tattatatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 9196683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 10923852 - 10923803
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  10923852 attatattgatgtactctatcaatttgaatgaatgaatatcttttatttt 10923803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 35906665 - 35906714
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  35906665 attatattgatgtactctatcaatttgaatgaatgaatatcttttatttt 35906714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 39531113 - 39531060
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  39531113 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 39531060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 5378698 - 5378750
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  5378698 attatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 5378750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 177810 - 177768
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatc 43  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||    
T  177810 gtattgtatcgatgtactccatcaatttgaatgaatgaatatc 177768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11734551 - 11734497
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  11734551 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 11734497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17095947 - 17095893
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||| ||| ||||||||||    
T  17095947 gtattgtatcgatgtactctatcaatttgaatgaatgaatgtcgtttatttttgt 17095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 26877947 - 26877913
Alignment:
Q  10 tgatgtactccatcaattcgaatgaatgaatatcg 44  Q
    |||||||||| ||||||||||||||||||||||||    
T  26877947 tgatgtactctatcaattcgaatgaatgaatatcg 26877913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39179551 - 39179497
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  39179551 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 39179497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 6635664 - 6635717
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  6635664 tattgtatcgatgtactctatcaatttgaatgaatgaaaatcgtttatttttgt 6635717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 31646225 - 31646274
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  31646225 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 31646274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 586165 - 586209
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  586165 gatgtactctatcaatttgaatgaatgaatatcgtttagttttgt 586209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 3740758 - 3740798
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  3740758 atgtactctatcaatttgaatgaatgaatatcgtttatttt 3740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 4726721 - 4726669
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||  |||||||| ||||||| |||||||||||||||  ||||||||||    
T  4726721 attatatcaatgtactctatcaatttgaatgaatgaatatcatttatttttgt 4726669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 40775165 - 40775209
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  40775165 gatgtactctatcaatttgaatgaatgaatatcatttatttttgt 40775209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 41358430 - 41358470
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatc 43  Q
    ||||||| ||||||||| ||||||| |||||||||||||||    
T  41358430 attatatcgatgtactctatcaatttgaatgaatgaatatc 41358470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14585877 - 14585931
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  14585877 gtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 14585931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 19645611 - 19645659
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  19645611 tattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 19645659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 50981176 - 50981128
Alignment:
Q  5 tatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  50981176 tatattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 50981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 51084310 - 51084262
Alignment:
Q  5 tatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  51084310 tatattgatgtactctatcaatttgaatgaatgaatatcgtttattttt 51084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1074608 - 1074557
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||| |||||||    
T  1074608 gtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttt 1074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11819499 - 11819553
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  11819499 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 11819553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13701716 - 13701662
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  13701716 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 13701662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24483410 - 24483356
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  24483410 gtattctatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 24483356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 55090413 - 55090359
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  55090413 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 55090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 49627817 - 49627764
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  49627817 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 49627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2192493 - 2192545
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  2192493 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 22844456 - 22844500
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||    
T  22844456 gatgtactctatcaattcgaatgaatgaatatcatttatttttgt 22844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1806179 - 1806140
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaat 40  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  1806179 gtattaaatcgatgtactccatcaattcgaatgaatgaat 1806140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 48401508 - 48401559
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  48401508 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 48401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 55455288 - 55455331
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||    
T  55455288 atgtactctatcaatttgaatgaatgaatatcgtttatttttgt 55455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33637809 - 33637863
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  33637809 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgt 33637863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53155144 - 53155090
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| |||||||  ||||||||||||||| ||||||||||    
T  53155144 gtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgt 53155090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 54706436 - 54706394
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||    
T  54706436 gatgtactctatcaatttgaatgaatgaatatcgtttattttt 54706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 25111882 - 25111829
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||||| || |||| |||||||||||||||  ||||||||||    
T  25111882 tattatatcgatgtactctattaatttgaatgaatgaatatcatttatttttgt 25111829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 43030079 - 43030128
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  43030079 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 43030128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21084453 - 21084401
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||||||| ||||| |||||| ||||||||    
T  21084453 gtattgtatcgatgtactctatcaattcgaacgaatggatatcgtttattttt 21084401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 36623967 - 36623923
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  36623967 gatgtactctatcaatttgaatgaatgaatatcatttatttttgt 36623923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 43839235 - 43839195
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatc 43  Q
    ||||||| ||||||||| ||||||| |||||||||||||||    
T  43839235 attatatcgatgtactctatcaatttgaatgaatgaatatc 43839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16136493 - 16136547
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  16136493 gtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 16136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34416469 - 34416415
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  34416469 gtattgtatcgatgtactctatcaattcgaatgaatgaatatcgtttatttttgt 34416415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43696283 - 43696337
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  43696283 gtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 43696337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 27096115 - 27096158
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  27096115 atgtactccatcaatttgaatgaatgaatatcgtttatttttgt 27096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33012463 - 33012518
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgtt 56  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| |||||||||||    
T  33012463 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtt 33012518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3527401 - 3527455
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  3527401 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 3527455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13878715 - 13878661
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  13878715 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 13878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14018840 - 14018786
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  14018840 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 14018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20560839 - 20560785
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  20560839 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 20560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25068256 - 25068310
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  25068256 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 25068310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29543208 - 29543262
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  29543208 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 29543262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 31908522 - 31908472
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    |||| ||||||||||||| ||||||| |||||||||||||||| |||||||    
T  31908522 tattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttt 31908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32015668 - 32015722
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||| |||| |||||    
T  32015668 gtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatctttgt 32015722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34471371 - 34471425
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||||||||||| ||||||||| |||||| ||||||||||    
T  34471371 gtattgtatcgatgtactccatcaatttgaatgaatgtatatcgtttatttttgt 34471425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35333920 - 35333974
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  35333920 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 35333974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 36868424 - 36868477
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||| ||||| ||||||| |||||||||||||||| ||||||||||    
T  36868424 tattatatcgatatactctatcaatttgaatgaatgaatatcgtttatttttgt 36868477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 11550380 - 11550332
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  11550380 tattgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 11550332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5754697 - 5754748
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||||| |||||| || ||||||| |||||||||||||||| |||||||    
T  5754697 gtattatatcgatgtattctatcaatttgaatgaatgaatatcgtttatttt 5754748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44942701 - 44942752
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| |||||||    
T  44942701 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttt 44942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 3390819 - 3390869
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||||||||    
T  3390819 attatatcgatgtactctatcaatttgaatgaatgaatatcttttattttt 3390869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4732477 - 4732531
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| |||| ||||||||||| ||||| ||||    
T  4732477 gtattgtattgatgtactctatcaatttgaattaatgaatatcgtttattattgt 4732531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4739744 - 4739798
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  4739744 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgt 4739798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 4878450 - 4878400
Alignment:
Q  5 tatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  4878450 tatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 4878400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12890823 - 12890769
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  12890823 gtattgtatcgatgtactctatcaatttgaattaatgaatatcgtttatttttgt 12890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15920268 - 15920322
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  15920268 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 15920322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18089118 - 18089064
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||||    
T  18089118 gtattgtatcgatgtactatatcaatttgaatgaatgaatatcgtttatttttgt 18089064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32314840 - 32314894
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||  ||||||| ||||||||||||||| |||||||||||    
T  32314840 gtattgtatcgatgtactttatcaatttgaatgaatgaatatctattatttttgt 32314894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 10286719 - 10286670
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattattt 51  Q
    |||| ||||||||||||| ||||||| |||||||| ||||||| ||||||    
T  10286719 tattgtattgatgtactctatcaatttgaatgaataaatatcgtttattt 10286670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 25771841 - 25771890
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  25771841 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 25771890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28261611 - 28261558
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttg 54  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||| | |||||||||    
T  28261611 gtattgtatcgatgtactctatcaatttgaatgaatgaatattgtttatttttg 28261558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11931268 - 11931320
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||  ||||||| |||||||||||||||  ||||||||||    
T  11931268 attatatcgatgtactttatcaatttgaatgaatgaatatcatttatttttgt 11931320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12705101 - 12705153
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||  ||||||||    
T  12705101 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcctttattttt 12705153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 16379813 - 16379761
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttg 54  Q
    |||| ||||||||||||| ||||||| || || |||||||||| |||||||||    
T  16379813 tattgtattgatgtactctatcaatttgattgtatgaatatcggttatttttg 16379761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 18141191 - 18141147
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  18141191 gatgtactctatcaatttgaatgaatgaatatcatttatttttgt 18141147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34962701 - 34962649
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| |||| |||||||| ||||||| |||||||||||||||  ||||||||    
T  34962701 gtattgtatttatgtactctatcaatttgaatgaatgaatatcatttattttt 34962649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 37884053 - 37884101
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||  ||||||| |||||||||||||||| ||||| ||||    
T  37884053 tattgatgtactatatcaatttgaatgaatgaatatcgtttattattgt 37884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 38434994 - 38435046
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  38434994 attatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 38435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45350776 - 45350720
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgttt 57  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  45350776 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgttt 45350720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45360255 - 45360199
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgttt 57  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  45360255 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgttt 45360199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6912095 - 6912149
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| || ||||||||||    
T  6912095 gtattgtattgatgtactctatcaatttgaatgaatgaataacgtttatttttgt 6912149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13965958 - 13966012
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  13965958 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 13966012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24826054 - 24826108
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  24826054 gtattctatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 24826108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42197968 - 42198022
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  42197968 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 42198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 7084367 - 7084411
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  7084367 gatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 7084411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 11210013 - 11209965
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  11210013 tattgatgtactctatcaatttgaatgaatgaatatcttttatttttgt 11209965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 14346835 - 14346879
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  14346835 gatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 14346879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 44374993 - 44374941
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  44374993 attatatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 44374941  T

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Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 393980 - 393925
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgtt 56  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| |||||||||||    
T  393980 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtt 393925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 8517154 - 8517111
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||    
T  8517154 atgtactctatcaatttgaatgaatgaatatcgtttatttttgt 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6882359 - 6882413
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  6882359 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgt 6882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18502548 - 18502494
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| |||||||  ||||||||||||||| ||||||||||    
T  18502548 gtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgt 18502494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24100548 - 24100602
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  24100548 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 24100602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31522361 - 31522411
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattt 51  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||    
T  31522361 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattt 31522411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 43244075 - 43244033
Alignment:
Q  13 tgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||    
T  43244075 tgtactctatcaatttgaatgaatgaatatcgtttatttttgt 43244033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 55600252 - 55600198
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| |||| |||| ||||||| |||||||||||||||| ||||||||||    
T  55600252 gtattgtatcgatgcactctatcaatttgaatgaatgaatatcgtttatttttgt 55600198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 56236537 - 56236483
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||  ||||||||||    
T  56236537 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcatttatttttgt 56236483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 4634679 - 4634728
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  4634679 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 4634728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 7060740 - 7060781
Alignment:
Q  12 atgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    |||||||| ||||||| |||||||||||||||| ||||||||    
T  7060740 atgtactctatcaatttgaatgaatgaatatcgtttattttt 7060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 9662249 - 9662298
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttt 52  Q
    ||||||| ||||||||| ||||||| |||||||||||||||  |||||||    
T  9662249 attatatcgatgtactctatcaatttgaatgaatgaatatcttttatttt 9662298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 20887462 - 20887409
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| |||||||  ||||||||||||||| ||||||||||    
T  20887462 tattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgt 20887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28837470 - 28837522
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||  ||||||||    
T  28837470 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcagttattttt 28837522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 29474042 - 29473994
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||| | ||||| |||||||||||||||  ||||||||||    
T  29474042 tattgatgtactctaccaatttgaatgaatgaatatcttttatttttgt 29473994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 41837735 - 41837783
Alignment:
Q  7 tattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||||||| ||||||| |||||||| | ||||| ||||||||||    
T  41837735 tattgatgtactctatcaatttgaatgaataattatcgtttatttttgt 41837783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 46716612 - 46716560
Alignment:
Q  3 attatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||| ||||||||  ||||||| |||||||||||||||  ||||||||||    
T  46716612 attatatcgatgtactatatcaatttgaatgaatgaatatcatttatttttgt 46716560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35490 - 35544
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  35490 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 35544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 3311 - 3364
Alignment:
Q  2 tattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  3311 tattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgt 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5246 - 5192
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||||| || |||| |||||||||||||||  ||||||||||    
T  5246 gtattatatcgatgtactctataaatttgaatgaatgaatatcatttatttttgt 5192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3773 - 3719
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||| ||| ||||||    
T  3773 gtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttacttttgt 3719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 403954 - 403900
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||| ||| ||||||||| || |||| |||||||||||||||| ||||||||||    
T  403954 gtattgtatcgatgtactctattaatttgaatgaatgaatatcgtttatttttgt 403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 7977 - 8021
Alignment:
Q  9 ttgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||||||||| ||||||| |||||||||||||||| || |||||    
T  7977 ttgatgtactctatcaatttgaatgaatgaatatcgttttttttt 8021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2154 - 2102
Alignment:
Q  1 gtattatattgatgtactccatcaattcgaatgaatgaatatcgattattttt 53  Q
    ||||| ||| ||||||||  ||||||| |||||||||||||||| ||||||||    
T  2154 gtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttattttt 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 21018 - 21062
Alignment:
Q  11 gatgtactccatcaattcgaatgaatgaatatcgattatttttgt 55  Q
    ||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  21018 gatgtactctatcaatttgaatgaatgaaaatcgtttatttttgt 21062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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