View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12410_high_6 (Length: 210)

Name: NF12410_high_6
Description: NF12410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12410_high_6
NF12410_high_6
[»] chr7 (67 HSPs)
chr7 (1-195)||(19119446-19119642)
chr7 (1-143)||(34745864-34746007)
chr7 (11-160)||(5336020-5336168)
chr7 (1-163)||(14593857-14594012)
chr7 (1-163)||(16013380-16013535)
chr7 (1-108)||(45558483-45558590)
chr7 (1-150)||(48735923-48736072)
chr7 (1-163)||(11594057-11594220)
chr7 (1-163)||(12841297-12841460)
chr7 (1-96)||(25578025-25578120)
chr7 (1-159)||(28627955-28628114)
chr7 (1-163)||(31682624-31682787)
chr7 (1-166)||(35906223-35906389)
chr7 (1-137)||(40979950-40980087)
chr7 (1-137)||(43281797-43281934)
chr7 (48-163)||(36514277-36514392)
chr7 (1-136)||(45836504-45836640)
chr7 (1-163)||(49029373-49029536)
chr7 (1-137)||(39906394-39906531)
chr7 (1-149)||(42177041-42177189)
chr7 (71-162)||(24549780-24549872)
chr7 (1-93)||(38607160-38607252)
chr7 (1-163)||(18605168-18605331)
chr7 (80-158)||(30814772-30814851)
chr7 (1-163)||(37618042-37618205)
chr7 (71-145)||(40830317-40830392)
chr7 (1-139)||(45601597-45601736)
chr7 (1-119)||(29650526-29650644)
chr7 (1-55)||(35865909-35865963)
chr7 (4-126)||(38921111-38921236)
chr7 (2-108)||(40138971-40139077)
chr7 (7-143)||(22174117-22174254)
chr7 (1-137)||(34869543-34869680)
chr7 (1-137)||(36652115-36652252)
chr7 (1-52)||(6375077-6375128)
chr7 (1-159)||(7273201-7273360)
chr7 (1-52)||(24777170-24777221)
chr7 (1-52)||(28208350-28208401)
chr7 (1-60)||(31681042-31681101)
chr7 (1-52)||(34035176-34035227)
chr7 (1-51)||(17759483-17759533)
chr7 (1-55)||(31869124-31869178)
chr7 (1-46)||(31840445-31840490)
chr7 (1-137)||(38900080-38900216)
chr7 (1-32)||(6682582-6682613)
chr7 (1-163)||(18637659-18637822)
chr7 (1-163)||(18651093-18651256)
chr7 (1-60)||(32631765-32631824)
chr7 (2-41)||(35172088-35172127)
chr7 (1-32)||(47155194-47155225)
chr7 (71-117)||(30144919-30144965)
chr7 (98-163)||(36136861-36136927)
chr7 (1-43)||(40630652-40630694)
chr7 (2-52)||(46355879-46355929)
chr7 (71-163)||(1569113-1569206)
chr7 (71-163)||(13859100-13859193)
chr7 (2-126)||(30664702-30664827)
chr7 (71-108)||(30914594-30914631)
chr7 (71-163)||(31005320-31005413)
chr7 (1-46)||(33073144-33073189)
chr7 (71-163)||(33349898-33349991)
chr7 (71-163)||(35559085-35559178)
chr7 (114-163)||(36101901-36101950)
chr7 (71-163)||(38135305-38135398)
chr7 (5-118)||(48919255-48919368)
chr7 (119-163)||(39812054-39812098)
chr7 (1-45)||(48515491-48515535)
[»] chr4 (86 HSPs)
chr4 (1-160)||(31961288-31961448)
chr4 (1-160)||(31897450-31897610)
chr4 (5-117)||(44360230-44360342)
chr4 (1-163)||(10209131-10209294)
chr4 (3-143)||(46372141-46372282)
chr4 (1-150)||(10775493-10775641)
chr4 (3-150)||(42285727-42285873)
chr4 (1-142)||(35555672-35555811)
chr4 (1-93)||(50869902-50869994)
chr4 (1-163)||(2589169-2589332)
chr4 (2-78)||(13262395-13262471)
chr4 (18-108)||(6478722-6478812)
chr4 (1-117)||(17900624-17900740)
chr4 (1-163)||(31959836-31959999)
chr4 (1-163)||(51550271-51550433)
chr4 (1-137)||(8286562-8286699)
chr4 (71-159)||(26356720-26356809)
chr4 (1-137)||(32479161-32479298)
chr4 (1-160)||(42639042-42639202)
chr4 (1-163)||(4440950-4441113)
chr4 (1-163)||(39708530-39708693)
chr4 (1-86)||(35622698-35622783)
chr4 (1-104)||(25257618-25257719)
chr4 (1-127)||(8598963-8599090)
chr4 (1-163)||(21236955-21237118)
chr4 (1-163)||(33190870-33191033)
chr4 (1-163)||(52569537-52569700)
chr4 (1-158)||(56375392-56375550)
chr4 (1-149)||(40018211-40018360)
chr4 (1-160)||(35690371-35690531)
chr4 (1-60)||(6958260-6958319)
chr4 (1-163)||(48174115-48174278)
chr4 (1-163)||(48622565-48622728)
chr4 (12-94)||(6318838-6318920)
chr4 (1-55)||(27450202-27450256)
chr4 (71-144)||(45569101-45569175)
chr4 (68-149)||(38903807-38903888)
chr4 (71-163)||(47147470-47147563)
chr4 (1-54)||(49939756-49939809)
chr4 (1-128)||(6957730-6957858)
chr4 (1-128)||(12494795-12494923)
chr4 (1-128)||(20999132-20999260)
chr4 (1-117)||(26024872-26024988)
chr4 (1-113)||(37042686-37042798)
chr4 (1-163)||(436326-436489)
chr4 (5-163)||(1777043-1777202)
chr4 (71-149)||(7682002-7682081)
chr4 (6-144)||(18966721-18966860)
chr4 (1-127)||(23906319-23906446)
chr4 (1-76)||(36556782-36556857)
chr4 (1-60)||(51811301-51811359)
chr4 (1-55)||(32633428-32633482)
chr4 (1-69)||(5367673-5367742)
chr4 (1-137)||(33227332-33227469)
chr4 (71-146)||(934523-934598)
chr4 (1-128)||(21528420-21528548)
chr4 (71-163)||(49738642-49738731)
chr4 (71-158)||(50679606-50679694)
chr4 (1-52)||(19061957-19062008)
chr4 (1-52)||(19969390-19969441)
chr4 (71-145)||(21879245-21879320)
chr4 (1-163)||(26037527-26037690)
chr4 (1-52)||(31339733-31339784)
chr4 (1-55)||(7066521-7066574)
chr4 (101-166)||(20192127-20192193)
chr4 (71-140)||(26025011-26025081)
chr4 (1-67)||(26356953-26357019)
chr4 (1-149)||(45184155-45184302)
chr4 (92-149)||(49987519-49987577)
chr4 (1-43)||(50238637-50238679)
chr4 (1-43)||(50238723-50238765)
chr4 (1-166)||(53707888-53708054)
chr4 (71-163)||(28351656-28351749)
chr4 (80-148)||(40268364-40268433)
chr4 (98-163)||(41009469-41009534)
chr4 (1-34)||(42619094-42619127)
chr4 (1-149)||(53540401-53540550)
chr4 (7-55)||(883388-883436)
chr4 (68-108)||(7544612-7544652)
chr4 (72-163)||(43434021-43434113)
chr4 (1-33)||(44047392-44047424)
chr4 (1-41)||(45209227-45209267)
chr4 (1-41)||(49686913-49686953)
chr4 (2-46)||(52227918-52227962)
chr4 (74-149)||(53517641-53517717)
chr4 (1-41)||(55007966-55008006)
[»] chr2 (58 HSPs)
chr2 (3-163)||(5759019-5759180)
chr2 (1-160)||(44437743-44437903)
chr2 (1-143)||(12489824-12489967)
chr2 (1-163)||(42543332-42543495)
chr2 (4-142)||(4598587-4598726)
chr2 (1-100)||(12470919-12471018)
chr2 (5-104)||(20129627-20129726)
chr2 (1-117)||(28960233-28960350)
chr2 (1-163)||(19235006-19235169)
chr2 (1-68)||(19334174-19334241)
chr2 (1-163)||(28508775-28508938)
chr2 (3-163)||(37481641-37481802)
chr2 (3-163)||(43832195-43832356)
chr2 (1-85)||(29968633-29968717)
chr2 (1-166)||(9556391-9556557)
chr2 (3-163)||(3866169-3866330)
chr2 (1-137)||(18424400-18424536)
chr2 (2-133)||(38430011-38430143)
chr2 (19-117)||(2807589-2807685)
chr2 (1-60)||(3635345-3635404)
chr2 (71-149)||(26784432-26784511)
chr2 (1-55)||(45367647-45367701)
chr2 (3-52)||(19224990-19225039)
chr2 (1-137)||(25834802-25834938)
chr2 (5-117)||(33594298-33594411)
chr2 (1-137)||(35643071-35643208)
chr2 (1-137)||(38452708-38452845)
chr2 (2-137)||(2610711-2610847)
chr2 (1-128)||(33287553-33287681)
chr2 (1-52)||(227398-227449)
chr2 (1-52)||(451670-451721)
chr2 (1-163)||(3243675-3243838)
chr2 (1-52)||(12474949-12475000)
chr2 (1-52)||(30306241-30306292)
chr2 (1-163)||(38435049-38435212)
chr2 (1-51)||(4807805-4807855)
chr2 (71-117)||(7431981-7432027)
chr2 (1-134)||(12734826-12734960)
chr2 (1-67)||(15025688-15025754)
chr2 (1-137)||(7326182-7326319)
chr2 (1-46)||(17670683-17670728)
chr2 (11-108)||(31386862-31386958)
chr2 (5-46)||(32541820-32541861)
chr2 (1-149)||(37470155-37470304)
chr2 (1-126)||(12026034-12026153)
chr2 (80-163)||(33504320-33504404)
chr2 (1-108)||(8197563-8197670)
chr2 (1-108)||(8202323-8202430)
chr2 (1-52)||(12520084-12520135)
chr2 (5-60)||(23997803-23997858)
chr2 (1-52)||(38328392-38328443)
chr2 (2-52)||(17429259-17429309)
chr2 (71-140)||(26670888-26670958)
chr2 (71-151)||(19024287-19024368)
chr2 (3-32)||(24101779-24101808)
chr2 (3-127)||(31959654-31959779)
chr2 (1-46)||(39709223-39709268)
chr2 (71-158)||(36183553-36183641)
[»] chr3 (50 HSPs)
chr3 (1-163)||(37351504-37351667)
chr3 (2-150)||(26990323-26990471)
chr3 (1-142)||(27893207-27893349)
chr3 (1-163)||(31454247-31454412)
chr3 (1-138)||(50631903-50632041)
chr3 (1-106)||(31452983-31453088)
chr3 (19-163)||(11581541-11581686)
chr3 (1-163)||(48508332-48508495)
chr3 (1-137)||(5168955-5169092)
chr3 (1-158)||(52138902-52139060)
chr3 (1-137)||(22195-22332)
chr3 (74-162)||(43254989-43255078)
chr3 (1-76)||(3987519-3987594)
chr3 (1-127)||(47233618-47233745)
chr3 (1-137)||(12096727-12096864)
chr3 (2-55)||(53519786-53519839)
chr3 (1-60)||(311331-311390)
chr3 (3-149)||(2340741-2340888)
chr3 (1-60)||(40273227-40273286)
chr3 (92-149)||(31261055-31261113)
chr3 (71-163)||(21200645-21200738)
chr3 (2-166)||(28245531-28245696)
chr3 (1-118)||(52156106-52156223)
chr3 (4-163)||(42510041-42510201)
chr3 (71-149)||(20262423-20262502)
chr3 (1-60)||(31566183-31566242)
chr3 (1-127)||(51447739-51447866)
chr3 (1-60)||(53262342-53262401)
chr3 (19-101)||(45373311-45373392)
chr3 (1-137)||(54128501-54128639)
chr3 (3-52)||(38850330-38850379)
chr3 (5-89)||(46367413-46367497)
chr3 (5-52)||(7895906-7895953)
chr3 (1-60)||(25191578-25191637)
chr3 (71-137)||(39600773-39600840)
chr3 (1-52)||(47555354-47555405)
chr3 (5-163)||(54279117-54279276)
chr3 (7-137)||(54365003-54365134)
chr3 (71-143)||(29475805-29475876)
chr3 (101-166)||(33272145-33272211)
chr3 (12-137)||(35033269-35033395)
chr3 (71-117)||(36820069-36820115)
chr3 (98-163)||(38430945-38431011)
chr3 (71-149)||(49841729-49841806)
chr3 (1-46)||(7278679-7278724)
chr3 (93-138)||(11284115-11284160)
chr3 (7-104)||(36304123-36304220)
chr3 (1-46)||(41529976-41530021)
chr3 (1-41)||(34610467-34610507)
chr3 (1-52)||(48532166-48532218)
[»] chr8 (53 HSPs)
chr8 (1-163)||(32043687-32043847)
chr8 (1-163)||(16351475-16351637)
chr8 (3-163)||(7531668-7531829)
chr8 (1-143)||(39953286-39953429)
chr8 (1-138)||(30812838-30812976)
chr8 (1-126)||(26685941-26686067)
chr8 (1-137)||(43733330-43733466)
chr8 (9-116)||(38901849-38901956)
chr8 (2-149)||(79138-79286)
chr8 (1-163)||(11523745-11523908)
chr8 (2-149)||(23492146-23492293)
chr8 (8-117)||(30456323-30456432)
chr8 (1-133)||(36545276-36545409)
chr8 (71-150)||(10079999-10080079)
chr8 (1-163)||(36565263-36565426)
chr8 (1-137)||(12491160-12491297)
chr8 (71-163)||(38178352-38178445)
chr8 (1-137)||(42854026-42854163)
chr8 (11-163)||(3079637-3079788)
chr8 (2-137)||(8932826-8932962)
chr8 (3-86)||(15215436-15215519)
chr8 (1-163)||(29520747-29520909)
chr8 (1-163)||(40813421-40813584)
chr8 (71-160)||(2216388-2216477)
chr8 (1-55)||(14742104-14742158)
chr8 (5-134)||(23023351-23023481)
chr8 (1-137)||(2796676-2796813)
chr8 (1-54)||(18473994-18474047)
chr8 (71-163)||(35643698-35643791)
chr8 (5-137)||(42469753-42469886)
chr8 (9-160)||(30783072-30783224)
chr8 (1-163)||(16917280-16917442)
chr8 (1-52)||(32569732-32569783)
chr8 (1-163)||(32931058-32931220)
chr8 (21-96)||(34196565-34196640)
chr8 (114-163)||(25985615-25985664)
chr8 (62-145)||(4011198-4011282)
chr8 (68-163)||(16715370-16715466)
chr8 (98-149)||(45512614-45512666)
chr8 (1-52)||(25473425-25473476)
chr8 (1-52)||(30689944-30689995)
chr8 (93-163)||(37826388-37826459)
chr8 (1-52)||(44529434-44529485)
chr8 (1-31)||(1335556-1335586)
chr8 (114-160)||(29700376-29700422)
chr8 (9-55)||(36042404-36042450)
chr8 (98-163)||(45419332-45419398)
chr8 (1-46)||(16035749-16035794)
chr8 (71-163)||(30559790-30559883)
chr8 (2-162)||(35914624-35914785)
chr8 (114-163)||(38409158-38409207)
chr8 (1-60)||(12025978-12026040)
chr8 (1-41)||(14742860-14742900)
[»] chr1 (76 HSPs)
chr1 (2-163)||(28528452-28528614)
chr1 (3-149)||(51584855-51585002)
chr1 (1-139)||(7083011-7083150)
chr1 (1-163)||(10272355-10272516)
chr1 (38-146)||(27637690-27637799)
chr1 (4-163)||(52442554-52442713)
chr1 (6-162)||(40419737-40419893)
chr1 (2-163)||(50771578-50771741)
chr1 (7-159)||(12261741-12261894)
chr1 (59-163)||(37263428-37263532)
chr1 (1-163)||(50806766-50806927)
chr1 (1-163)||(26016534-26016697)
chr1 (1-108)||(13578924-13579030)
chr1 (5-149)||(6641222-6641367)
chr1 (1-137)||(25979253-25979390)
chr1 (1-117)||(30445255-30445365)
chr1 (1-149)||(38868993-38869142)
chr1 (1-163)||(1210842-1211005)
chr1 (1-127)||(29807989-29808116)
chr1 (1-163)||(49347415-49347578)
chr1 (1-137)||(30202152-30202289)
chr1 (1-137)||(52921203-52921340)
chr1 (1-160)||(32404548-32404708)
chr1 (49-163)||(43898326-43898444)
chr1 (1-163)||(22090193-22090356)
chr1 (5-163)||(34792375-34792534)
chr1 (71-149)||(44008690-44008769)
chr1 (1-137)||(4001477-4001614)
chr1 (1-149)||(6025716-6025865)
chr1 (1-137)||(37311777-37311914)
chr1 (1-161)||(38807693-38807854)
chr1 (71-149)||(853877-853956)
chr1 (1-163)||(4029219-4029382)
chr1 (1-52)||(28533676-28533727)
chr1 (1-137)||(696392-696530)
chr1 (1-55)||(15086128-15086182)
chr1 (1-86)||(37263532-37263618)
chr1 (1-149)||(28511823-28511972)
chr1 (11-163)||(39318226-39318379)
chr1 (1-54)||(48861397-48861450)
chr1 (71-146)||(8342973-8343049)
chr1 (1-136)||(51440787-51440923)
chr1 (1-163)||(2544696-2544853)
chr1 (1-52)||(5113952-5114003)
chr1 (1-159)||(8796310-8796469)
chr1 (1-163)||(9599416-9599579)
chr1 (71-149)||(15577529-15577608)
chr1 (38-136)||(19969271-19969370)
chr1 (1-52)||(29577461-29577512)
chr1 (71-149)||(30834069-30834148)
chr1 (1-143)||(36339826-36339968)
chr1 (1-52)||(43240401-43240452)
chr1 (105-163)||(49377421-49377480)
chr1 (1-108)||(52532638-52532745)
chr1 (1-55)||(15437150-15437204)
chr1 (59-108)||(3662518-3662567)
chr1 (71-163)||(8672015-8672108)
chr1 (20-109)||(17640108-17640197)
chr1 (71-163)||(32231046-32231139)
chr1 (1-69)||(14224277-14224344)
chr1 (1-136)||(41560353-41560489)
chr1 (3-46)||(3777284-3777327)
chr1 (1-147)||(3818878-3819025)
chr1 (22-117)||(15242150-15242244)
chr1 (73-143)||(29577236-29577307)
chr1 (114-149)||(43423830-43423865)
chr1 (1-52)||(44751693-44751744)
chr1 (1-52)||(44941798-44941849)
chr1 (71-145)||(7921953-7922027)
chr1 (1-31)||(39140745-39140775)
chr1 (71-127)||(8203226-8203283)
chr1 (1-46)||(43028830-43028875)
chr1 (3-55)||(8391978-8392030)
chr1 (60-100)||(9468454-9468494)
chr1 (1-60)||(32082778-32082838)
chr1 (1-41)||(41165502-41165542)
[»] chr6 (36 HSPs)
chr6 (1-164)||(10617256-10617420)
chr6 (17-163)||(7513427-7513575)
chr6 (17-163)||(7080437-7080584)
chr6 (1-117)||(38907-39031)
chr6 (18-140)||(14315039-14315161)
chr6 (1-143)||(34527-34670)
chr6 (1-163)||(28085473-28085636)
chr6 (1-137)||(30031379-30031516)
chr6 (1-163)||(8364653-8364816)
chr6 (1-163)||(12890672-12890835)
chr6 (1-119)||(608303-608421)
chr6 (5-138)||(34143791-34143925)
chr6 (5-138)||(34156407-34156541)
chr6 (52-117)||(27755819-27755883)
chr6 (2-55)||(33084135-33084188)
chr6 (1-61)||(30789096-30789156)
chr6 (1-60)||(3206481-3206540)
chr6 (1-60)||(9706971-9707030)
chr6 (1-52)||(31819040-31819091)
chr6 (1-163)||(32756018-32756181)
chr6 (71-163)||(9593800-9593891)
chr6 (1-54)||(4245894-4245947)
chr6 (62-149)||(1747724-1747812)
chr6 (4-143)||(31818648-31818788)
chr6 (1-52)||(1615245-1615296)
chr6 (1-60)||(5258170-5258229)
chr6 (12-55)||(10453269-10453312)
chr6 (1-52)||(34934852-34934903)
chr6 (5-127)||(35043467-35043590)
chr6 (71-128)||(1681613-1681671)
chr6 (1-51)||(21886314-21886364)
chr6 (12-54)||(32949726-32949768)
chr6 (114-163)||(3963896-3963945)
chr6 (80-163)||(4948405-4948489)
chr6 (80-163)||(4955376-4955460)
chr6 (71-160)||(21870158-21870247)
[»] chr5 (52 HSPs)
chr5 (12-163)||(1525741-1525893)
chr5 (1-163)||(2713041-2713196)
chr5 (5-148)||(33667547-33667691)
chr5 (38-150)||(31635979-31636092)
chr5 (11-150)||(10082777-10082917)
chr5 (1-90)||(3442893-3442982)
chr5 (1-105)||(37065632-37065737)
chr5 (26-163)||(14749404-14749542)
chr5 (43-163)||(21952454-21952573)
chr5 (1-163)||(11002443-11002606)
chr5 (1-94)||(28411843-28411936)
chr5 (1-163)||(28976881-28977044)
chr5 (12-109)||(1174641-1174738)
chr5 (1-137)||(38685090-38685227)
chr5 (20-108)||(1935275-1935363)
chr5 (1-163)||(12492406-12492569)
chr5 (1-163)||(38578540-38578706)
chr5 (71-168)||(18698886-18698984)
chr5 (1-137)||(3301967-3302104)
chr5 (1-163)||(2915518-2915680)
chr5 (1-163)||(4496481-4496644)
chr5 (18-117)||(21916024-21916123)
chr5 (1-134)||(27998567-27998701)
chr5 (71-163)||(9917542-9917635)
chr5 (1-137)||(10639425-10639562)
chr5 (1-137)||(13561408-13561545)
chr5 (1-160)||(7678578-7678737)
chr5 (1-128)||(29816514-29816642)
chr5 (1-163)||(1287601-1287764)
chr5 (71-149)||(36123274-36123353)
chr5 (1-166)||(38684574-38684740)
chr5 (1-54)||(1275471-1275524)
chr5 (2-103)||(16133995-16134095)
chr5 (1-163)||(2075495-2075659)
chr5 (2-137)||(34273136-34273272)
chr5 (1-52)||(30213784-30213835)
chr5 (1-55)||(1935399-1935453)
chr5 (1-55)||(9121100-9121154)
chr5 (71-163)||(12576952-12577045)
chr5 (71-163)||(24178607-24178700)
chr5 (71-163)||(42199383-42199476)
chr5 (71-163)||(42199490-42199583)
chr5 (5-117)||(17213218-17213329)
chr5 (98-160)||(6859481-6859544)
chr5 (1-52)||(15252766-15252817)
chr5 (1-52)||(20456982-20457033)
chr5 (1-43)||(408516-408558)
chr5 (5-55)||(14911378-14911428)
chr5 (1-137)||(16347402-16347537)
chr5 (66-150)||(15369884-15369968)
chr5 (71-163)||(20456870-20456963)
chr5 (73-143)||(9235166-9235235)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-108)||(163216-163322)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-163)||(970-1133)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-137)||(82842-82974)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-137)||(16701-16838)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-128)||(25554-25682)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-52)||(540-591)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-52)||(28911-28962)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-163)||(31565-31728)
scaffold0018 (71-149)||(178512-178591)
[»] scaffold0325 (1 HSPs)
scaffold0325 (72-145)||(11912-11986)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-43)||(11573-11613)
[»] scaffold0194 (1 HSPs)
scaffold0194 (19-86)||(12019-12086)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-84)||(58248-58331)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-78)||(99308-99386)


Alignment Details
Target: chr7 (Bit Score: 178; Significance: 3e-96; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 19119446 - 19119642
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19119446 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccatcttgata 19119545  T
Q  101 gtttctctaatagttttctaggtcttccactacctctagtgatttgactcttctccatctg--atatatatatactctctgtactacaacatccaca 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  19119546 gtttctctaatagttttctaggtcttccactacctctagtgatttgactctcctccatctgatatatatatatactctctgtactacaacatccaca 19119642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34746007 - 34745864
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||| |||||| |||||| |||||||| |||| |||||||||| | |||    
T  34746007 ccactaagtggggtcggctacatgaatcaaacaacgccatagcgttctatcaaaaaccatgtttttctccaactcatttatctttagatccttcctaata 34745908  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    |||||||| || | |||||||||||| || ||| ||||||||||    
T  34745907 gtttctcttatggtttttctaggtctacccctaactctagtgat 34745864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 5336168 - 5336020
Alignment:
Q  11 gggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaa 110  Q
    |||||||||||||||||||||||||| |||||| ||  ||||||| ||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||  |    
T  5336168 gggtcggctacatgaatcaaacgacgccatagtattcaatcaaaaaccatgtctttctccaactcattaatctctagatcattcttaatagtatctc--a 5336071  T
Q  111 tag-ttttctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    ||| ||||| |||| |||| ||||||| |||||||||||||  ||||||||    
T  5336070 tagtttttcaaggttttcccctacctcgagtgatttgactcccctccatct 5336020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14594012 - 14593857
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||||||||| | |||||  | ||||||| |||||||| ||||||| ||||| ||        ||||||| | |||||| |||    
T  14594012 ccactaagtggggtcggctacatgaattatacgacaccgtagtgttctatcaaaaaccatgtccttctccaa--------tctctaggttcttcttaata 14593921  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||| |||||||    
T  14593920 gtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcctctctatctgat 14593857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16013535 - 16013380
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||||||||| | |||||  | ||||||| |||||||| ||||||| ||||| ||        ||||||| | |||||| |||    
T  16013535 ccactaagtggggtcggctacatgaattatacgacaccgtagtgttctatcaaaaaccatgtccttctccaa--------tctctaggttcttcttaata 16013444  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||| |||||||| |||||||||||| |||| |||||||    
T  16013443 gtttctcttatagtttttctaggtcttcccctacctctggtgatttgactcctctctatctgat 16013380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 45558590 - 45558483
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||| ||||||  |||||||||||||| |||| ||||||||| |||||||| ||||||||||| | |||||||| |||||||||||||||   |||    
T  45558590 ccactaagcggggtcaactacatgaatcaaatgacgccatagtgttctatcaaaaaccatgtctttcaccaactcatttatctctagatccttcccaata 45558491  T
Q  101 gtttctct 108  Q
    ||||||||    
T  45558490 gtttctct 45558483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 48735923 - 48736072
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| ||||||||||||||||||||| |||||| || | ||| || |||||||||||||||||||||| ||||||||| || |  | |||    
T  48735923 ccactaagtggggttggctacatgaatcaaacgacgccatagtattct-tcataaaccatgtctttctcaaactcatttatctctagaaccctactaata 48736021  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactc 150  Q
    |  ||||| |||| ||||| ||||||  | |||||||||||||| ||||||    
T  48736022 gcctctcttatagtttttcaaggtctagccctacctctagtgatctgactc 48736072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11594220 - 11594057
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  11594220 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 11594121  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  11594120 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 11594057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 12841297 - 12841460
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||  | |   |  |||||||||| ||||| ||||||  | ||     
T  12841297 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcattgacctctaaatcctttctaatg 12841396  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||||||||| |||||||||| ||||||||  | | |||||||| |||||| ||||    
T  12841397 gtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgat 12841460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 25578120 - 25578025
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttctt 96  Q
    ||||||||| || | ||||||| ||||| ||| ||| ||||||||| |||||||| ||||||||||||| || ||||| |||||||||||||||||    
T  25578120 ccactaagtaggtttggctacacgaatctaacaacgccatagtgttttatcaaaaaccatgtctttctccaattcattaatctctagatccttctt 25578025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 28627955 - 28628114
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| |||||||||||| ||||||  ||| |||| |||| ||||| || |||  | |   || |||||||| ||||||| ||| ||| | |||    
T  28627955 ccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaata 28628054  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatc 159  Q
    |||||||| |||||||| ||||||||||| |||||||| ||||||||||| | |||||||    
T  28628055 gtttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatc 28628114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31682624 - 31682787
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||  | |   || || ||||||| ||||| ||||||  | ||     
T  31682624 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcattgacctctaaatcctttctaatg 31682723  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  31682724 gtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttgat 31682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 35906223 - 35906389
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||| | ||||||  | ||     
T  35906223 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctcgaaatcctttctaatg 35906322  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| |||||||    
T  35906323 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatatgatata 35906389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 40979950 - 40980087
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||| ||  | |||    
T  40979950 ccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcttttctaata 40980049  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||||||| |||||||| ||||||||||| ||||||||    
T  40980050 gtttctcttatagttttcctaggtcttcctctacctct 40980087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 43281934 - 43281797
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  43281934 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatg 43281835  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||| ||| |||||| |||||||||| ||||||||    
T  43281834 gtttctcgaatggttttcttaggtcttcctctacctct 43281797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 36514277 - 36514392
Alignment:
Q  48 tatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaat-agttttctaggtcttccactacctctagtgatttg 146  Q
    |||||||| ||||||||||||| || ||||| |||||||||||||||||||||| |||||| ||   ||||||| ||| ||| ||||||||||||| |||    
T  36514277 tatcaaaaaccatgtctttctccaattcatttatctctagatccttcttgatagcttctcttatgttttttctatgtc-tcccctacctctagtgacttg 36514375  T
Q  147 actcttctccatctgat 163  Q
    ||||  ||| |||||||    
T  36514376 actcccctctatctgat 36514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 45836504 - 45836640
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  45836504 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 45836603  T
Q  101 gtttctctaatagtt-ttctaggtcttccactacctc 136  Q
    ||||||||||||||| | |||||||| || |||||||    
T  45836604 gtttctctaatagttgtcctaggtctccctctacctc 45836640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 49029536 - 49029373
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  49029536 ccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 49029437  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  49029436 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 49029373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 39906394 - 39906531
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || || ||||||| ||||| ||||||  | ||     
T  39906394 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcattgacctctaaatcctttctaatg 39906493  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  39906494 gtttctctaatagttttcctaggtcttcctctacctct 39906531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 42177041 - 42177189
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| |||  |||||  |||||||||||||||| ||||  |||| |  |||| | ||| | ||||||||| ||||||||||| ||||| |||    
T  42177041 ccactaagtggg-tcgattacatagatcaaacgacgtcataatgttcaatcatataccatatttttatgaaactcatttatctctagatctttcttaata 42177139  T
Q  101 gtttctctaata-gttttctaggtcttccactacctctagtgatttgact 149  Q
    | |||||| ||| |||||||| ||||||| | ||||||| ||||||||||    
T  42177140 gattctcttataggttttctacgtcttcctccacctctaatgatttgact 42177189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 24549780 - 24549872
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtt-ttctaggtcttccactacctctagtgatttgactcttctccatctga 162  Q
    |||||||| ||||||||||| ||||| ||||||||||| |||||| ||  ||||||||  |||||||||||||||||| ||  ||||||||||    
T  24549780 aactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttctacctctagtgatttgaatcccctccatctga 24549872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38607252 - 38607160
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatcctt 93  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||||||    
T  38607252 ccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcctt 38607160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 18605168 - 18605331
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| | | ||||||| ||||||| |||||||| ||||| |||  |||   || | |||||  |||||||| || |||| ||||||| | |||    
T  18605168 ccactaagtggagccagctacataaatcaaaggacgtcatggtgttctatacaaactaatatttttcttcaactcatttatttctaaatccttcataata 18605267  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||  ||||||| |||||||| ||  ||| ||||||||||||||||| ||| |||||||    
T  18605268 gtttctcttgtagtttttctaggtctacccatacatctagtgatttgactctcctcgatctgat 18605331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 30814772 - 30814851
Alignment:
Q  80 atctctagatccttcttgatagtttctctaatagt-tttctaggtcttccactacctctagtgatttgactcttctccat 158  Q
    ||||||||||| ||||| ||||||||||| ||||| |||||||||||||| || ||||||||||| ||||| | ||||||    
T  30814772 atctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgatctgactatcctccat 30814851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37618205 - 37618042
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||  ||||||||| ||||| |  |||  | |   || |||| ||||| ||||| ||||||  | ||     
T  37618205 ccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttattgacctctaaatcctttctaatg 37618106  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  37618105 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 37618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 40830392 - 40830317
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgattt 145  Q
    |||||||| || |||||||||||||| ||||||||||| |||| ||||||||||||||| ||  ||||||||||||    
T  40830392 aactcattaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctctagtgattt 40830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 45601736 - 45601597
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| | || |||||||| ||||||  ||  ||||||||| ||||| ||  ||| | ||  || |||||||| ||||||||||| ||||| ||     
T  45601736 ccactaagtgagttcagctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatg 45601637  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctag 139  Q
    |||||||| |||| ||||||||||||||| ||||||||||    
T  45601636 gtttctcttatagtttttctaggtcttcctctacctctag 45601597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29650644 - 29650526
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| | ||||||| |||||||| |||| | |   ||||||||||||| ||||| ||| ||  | ||     
T  29650644 ccactaagtggggtcggctacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcattgacctctaaatcttttctaatg 29650545  T
Q  101 gtttctctaatagttttct 119  Q
    ||||||| ||| |||||||    
T  29650544 gtttctcgaatggttttct 29650526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35865963 - 35865909
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||    
T  35865963 ccactaagtggggttggctacatgaaccaaacgacgccatagtgttttatcaaaa 35865909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 38921111 - 38921236
Alignment:
Q  4 ctaagtggggtcgg--ctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    ||||||||||||||  |||||||||||||| |||| |||||  || |||||||| ||||||||||||| |||   || | || |||||||||||| ||||    
T  38921111 ctaagtggggtcggtcctacatgaatcaaatgacgccatagccttctatcaaaaaccatgtctttctccaacctgttaacctgtagatccttcttaatag 38921210  T
Q  102 tttctctaatag-ttttctaggtctt 126  Q
    || ||||  ||| |||||||||||||    
T  38921211 ttcctcttctagtttttctaggtctt 38921236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 40138971 - 40139077
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||| |||||||| |||||| ||||||||| | || ||||| | | ||| | | | |||||| |||| ||||||||||| ||||| ||||    
T  40138971 cactaagtggggtctgctacatggatcaaatgacgtcataatattctatcatatgtcatatttctatcaaacgcattaatctctagatctttcttaatag 40139070  T
Q  102 tttctct 108  Q
    |||||||    
T  40139071 tttctct 40139077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 22174254 - 22174117
Alignment:
Q  7 agtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttct 106  Q
    |||||||||||||||||| ||||||| ||| |||| |||| ||||| |  |||| | | | || || ||||| ||||||||||| || || |||||||||    
T  22174254 agtggggtcggctacatggatcaaacaacgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttct 22174155  T
Q  107 ctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    || |||| ||||||| || |||| || |||||||||||    
T  22174154 cttatagtttttctacgttttcctctgcctctagtgat 22174117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 34869680 - 34869543
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| | |||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  34869680 ccactaattagggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 34869581  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  34869580 gtttctctaatagttttcctaggtcttcctctacctct 34869543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 36652252 - 36652115
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   |  |||||||||| ||||  ||||||  | ||     
T  36652252 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggattcaactcattgacctctgaatcctttctaatg 36652153  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  36652152 gtttctctaatagttttcttaggtcttcctctacctct 36652115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6375128 - 6375077
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  6375128 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 6375077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 7273360 - 7273201
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| | ||||| || |||| | |   || |||||||||| ||||  ||  ||  | ||     
T  7273360 ccactaagtggggtcggctacatggatcaaattacgtcatagtgctatatcataaaccatatttgaatccaactcattgacctctgaatattttctaatg 7273261  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatc 159  Q
    |||||||| ||||||||| |||||||||| ||||||||  |||  ||||||| |||||||    
T  7273260 gtttctcttatagttttcataggtcttcctctacctcttttgacctgactctcctccatc 7273201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24777221 - 24777170
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||||| || |||||||||||||||||| |||||||||||||| |||||    
T  24777221 ccactaagtaggatcggctacatgaatcaaatgacgtcatagtgttctatca 24777170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28208350 - 28208401
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  28208350 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 28208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31681042 - 31681101
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| ||||||  |||||||||| || ||||| |||||||    
T  31681042 ccactaagtggggtcggctacatggatcaaattacgtcatagtattctatcataagccat 31681101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34035176 - 34035227
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  34035176 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 34035227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17759533 - 17759483
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatc 51  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||| ||||    
T  17759533 ccactaagtggggtcggctacatgaatcaaacaacaccatagtgttctatc 17759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31869124 - 31869178
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||||||||| |||||| |||| || |||||| ||||||||    
T  31869124 ccactaagtggggtcggctacatggatcaaatgacgccagagtgttctatcaaaa 31869178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31840490 - 31840445
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||    
T  31840490 ccactaagtagggtaggctacatgaatcaaacgacgccatagtgtt 31840445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38900216 - 38900080
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| ||||||||||| |||||| |||| |||||||||  |||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  38900216 ccactaagtggg-tcggctacatggatcaaatgacgccatagtgttcaatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 38900118  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  38900117 gtttctctaatagttttcctaggtcttcctctacctct 38900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6682613 - 6682582
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  6682613 ccactaagtggggtcggctacatgaatcaaac 6682582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18637822 - 18637659
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| | | ||||||| ||||||| ||| |||| ||||| |||  |||   || | |||||  |||||||| || |||| ||||||| | |||    
T  18637822 ccactaagtggaggcagctacataaatcaaaggacatcatggtgttctatacaaactaatatttttcttcaactcatttatttctaaatccttcataata 18637723  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||  || |||| |||||||| ||  ||| ||||||||||||||||| ||| |||||||    
T  18637722 gtttctcttgtattttttctaggtctacccatacatctagtgatttgactctcctcgatctgat 18637659  T

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Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18651256 - 18651093
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| | | ||||||| ||||||| ||| |||| ||||| |||  |||   || | |||||  |||||||| || |||| ||||||| | |||    
T  18651256 ccactaagtggaggcagctacataaatcaaaggacatcatggtgttctatacaaactaatatttttcttcaactcatttatttctaaatccttcataata 18651157  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||  || |||| |||||||| ||  ||| ||||||||||||||||| ||| |||||||    
T  18651156 gtttctcttgtattttttctaggtctacccatacatctagtgatttgactctcctcgatctgat 18651093  T

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Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32631824 - 32631765
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||  |||||| |||| ||||| ||| |||||||| ||||    
T  32631824 ccactaagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccat 32631765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 35172088 - 35172127
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  35172088 cactaagtagggtcggctacatgaatcaaacgacatcata 35172127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 47155194 - 47155225
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  47155194 ccactaagtggggtcggctacatgaatcaaac 47155225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 30144965 - 30144919
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    |||||||| ||||||||||| ||||| |||||||||| |||||||||    
T  30144965 aactcattaatctctagatctttcttaatagtttctcgaatagtttt 30144919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 36136927 - 36136861
Alignment:
Q  98 atagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| |||||||| ||||||||||| |||| |||  |||| ||||||| |||||||||||    
T  36136927 atagtttctcttatagtttttctaggtcttcctctacttcttctgatctgactctcctccatctgat 36136861  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40630694 - 40630652
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagt 43  Q
    |||||||||||||||||||||||| |||||| |||| ||||||    
T  40630694 ccactaagtggggtcggctacatggatcaaatgacgccatagt 40630652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 46355879 - 46355929
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||||||||||||||||||| |||||| || | ||||||||| |||||    
T  46355879 cactaagtggggtcggctacatggatcaaatgatggcatagtgttctatca 46355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 1569206 - 1569113
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||||||||||| ||||| |||||| |||| |||| ||||||||| || || || |||||||  || ||||| | |||||||||||    
T  1569206 aactcattaatctctagatctttcttaatagttactcttatagtttttctaggactacctctgcctctagcaatctgactatcctccatctgat 1569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 13859100 - 13859193
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||  ||||| ||||||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  13859100 aactcattggcctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttgat 13859193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 30664827 - 30664702
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||| || ||||||||||||| || | |  |||||| ||| |||||||| || ||||||  |  || |||||||| ||||||||||| ||||| ||||    
T  30664827 cactaaatgaggtcggctacatggataatattacgtcaaagtattgtatcataaaccatgttatgatccaactcattaatctctagatctttcttaatag 30664728  T
Q  102 tttctctaatagt-tttctaggtctt 126  Q
    ||||| | ||||| ||||||| ||||    
T  30664727 tttcttttatagtctttctagatctt 30664702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 30914594 - 30914631
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctct 108  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  30914594 aactcattaatctctagatccttcatgatagtttctct 30914631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 31005413 - 31005320
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||||||  ||||||    || |||||||||||||||||| |||||||||| ||||||||  | | |||||||| |||||| ||||    
T  31005413 aactcattgatctctgaatcctttcaaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 31005320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33073189 - 33073144
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  33073189 ccactaagtgggatcggctacatggatcaaatgacgtcatattgtt 33073144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 33349898 - 33349991
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||| ||||| ||| ||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  33349898 aactcattgacctctaaatcatttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 33349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 35559085 - 35559178
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||| ||||| ||| ||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  35559085 aactcattgacctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 35559178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 36101901 - 36101950
Alignment:
Q  114 ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||| || ||||||||||| ||||| |||||||| ||||    
T  36101901 ttttctaggtcttcctctgcctctagtgatctgactattctccatatgat 36101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 38135305 - 38135398
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||||||| ||| || || ||||||||||| ||| |||| ||||||||||  || |||||| |||| ||||| | |||||||||||    
T  38135305 aactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatctgcctctaatgatctgactatcctccatctgat 38135398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 48919368 - 48919255
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||| ||||||| |||||| |||| ||||||| | ||||| || |||| | |   ||||||||||||| ||||| ||| ||  | || ||||    
T  48919368 taagtggggtcgactacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcattgacctctaaatcatttctaatggttt 48919269  T
Q  105 ctctaatagttttc 118  Q
     |||||||||||||    
T  48919268 ttctaatagttttc 48919255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 39812098 - 39812054
Alignment:
Q  119 taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| |||||||||||||| || | |||||||||||    
T  39812098 taggtcttccacttcctctagtgatttggctttcctccatctgat 39812054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48515535 - 48515491
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgt 45  Q
    |||||||||||||||||||||| | ||||||  ||||||||||||    
T  48515535 ccactaagtggggtcggctacacggatcaaattacgtcatagtgt 48515491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 31961288 - 31961448
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||| ||||||||||| ||| | |||    
T  31961288 ccactaagtgaggtcggctacatgaatcaaacgacgtcatagtgttctatcaacaaccatgtctttctccaactcatttatctctagatctttcctaata 31961387  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||| |||| |||||||||||| || ||||||||||||||||||||| |||||||||    
T  31961388 gtttctcttatagtttttctaggtctacccctacctctagtgatttgactcctctccatct 31961448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 31897450 - 31897610
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||| |||||| | ||||||||||||| |||||||| ||||||||||||||| | |||    
T  31897450 ccactaagtgaggttggctacatgaatcaaacggcgtcatagtgttctatcaacaaccatgtctttctccaactcatttatctctagatccttcctaata 31897549  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||| |||| |||||||||||| || |||||||||||||| ||||||  ||||||||    
T  31897550 gtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatct 31897610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 44360342 - 44360230
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||  ||| ||||||||||||| |||||    
T  44360342 taagtggggtcggctacatgaatcaaacgacgtcatagtgttctatcaaaaaccgtgtctttctccaactcattggcctcaagatccttcttgacagttt 44360243  T
Q  105 ctctaatagtttt 117  Q
    |||||||||||||    
T  44360242 ctctaatagtttt 44360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 10209294 - 10209131
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||| |||||||||||||| ||  ||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||| |||    
T  10209294 ccactaagtggggtcggctacttgaatcaaacgacgcca--gtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaata 10209197  T
Q  101 gtttctctaatag-ttttctaggtct--tccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||| ||||||||||||   || ||||| ||||| || ||||||| |||||||||||    
T  10209196 gtttctcttatagtttttctaggtctccccccctaccactagtcatatgactctcctccatctgat 10209131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 46372282 - 46372141
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    ||||||||||||| ||||||||||||||| ||||  |  ||||| |||||||| ||||||||||||| |||||||| ||||||||||||||| | |||||    
T  46372282 actaagtggggtcagctacatgaatcaaaggacgctacggtgttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 46372183  T
Q  103 ttctctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    |||||| |||| |||||||||||| || ||||||||||||||    
T  46372182 ttctcttatagtttttctaggtctacccctacctctagtgat 46372141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10775493 - 10775641
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||| ||||||||||| |||| |||||||| | ||||  ||||| |||||||| ||||||||||||| ||||||||| | |||||||||||||||||     
T  10775493 ccactatgtggggtcggcgacataaatcaaacaatgtca--gtgttctatcaaaaaccatgtctttctccaactcattgttttctagatccttcttgatg 10775590  T
Q  101 gtttctctaatagtt-ttctaggtcttccactacctctagtgatttgactc 150  Q
    ||||||||||||||| || |||||||||| ||| || |||| |||||||||    
T  10775591 gtttctctaatagttcttttaggtcttcctctatctttagttatttgactc 10775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 42285727 - 42285873
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    |||||||||||| ||||||||||||||||| | | |||||| || |||||||| ||||||||||||| |||||||| ||||||||||||||| | |||||    
T  42285727 actaagtggggttggctacatgaatcaaacaatgccatagtattctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 42285826  T
Q  103 ttctctaatag-ttttctaggtcttccactacctctagtgatttgactc 150  Q
    |  ||| |||| |||||||||||| || | |||||||||||| ||||||    
T  42285827 t--tcttatagcttttctaggtctacccccacctctagtgatctgactc 42285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 35555672 - 35555811
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||| |||||||||||||||||||||||| |||| |||  |||||||| ||||||||||||| |||||||| |||||||||    |||| |||    
T  35555672 ccactaaatggagtcggctacatgaatcaaacgacgccatactgtactatcaaaaaccatgtctttctccaactcatttatctctaga---ctcttaata 35555768  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtga 142  Q
    |||||||| |||| |||||||||||| || |||||||||||||    
T  35555769 gtttctcttatagtttttctaggtctacccctacctctagtga 35555811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50869902 - 50869994
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatcctt 93  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||| || ||||| ||||||||||||| |||||||| ||||||||||||||    
T  50869902 ccactaagtggggtcagctgcatgaatcaaacgacgccatagtgttctaccaaaaaccatgtctttctctaactcatttatctctagatcctt 50869994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2589332 - 2589169
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||||||  |||||||||||||||||||| ||||||||| |||||||| |||| | ||  || |||||||| |||||||||||| ||||||||    
T  2589332 ccactaactggggttagctacatgaatcaaacgacgccatagtgttctatcaaaaaccatattttcatccaactcattaatctctagatccatcttgata 2589233  T
Q  101 gtttctctaat-agttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||   ||||||||||| | | ||||||||||| |||| ||||  |||||| ||||    
T  2589232 gtttctcttatgctttttctaggtcgtgctctacctctagtaatttaactcccctccatttgat 2589169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 13262471 - 13262395
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcatt 78  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||    
T  13262471 cactaagtggagtcggctacatgaatcaaacgacgtcatagttttctatcaaaaaccatgtctttctccaactcatt 13262395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 6478722 - 6478812
Alignment:
Q  18 ctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    |||||||||||||| ||||  ||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||| | |||||||||||    
T  6478722 ctacatgaatcaaaggacgctatagtgttgtatcaaaaaccatgtctttctctaactcatttacctctagatccttcctaatagtttctct 6478812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17900740 - 17900624
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||| ||||||||||| ||| ||||||| | ||| |||| ||||||||||||  |||||||| ||||||| ||| ||| |||||    
T  17900740 ccactaagtggggtcagctaaatgaatcaaacaacgccatagtgctctattaaaaaccatgtctttctacaactcatttatctctatatctttcctgata 17900641  T
Q  101 gtttctctaatagtttt 117  Q
    |||||||| | ||||||    
T  17900640 gtttctcttaaagtttt 17900624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31959836 - 31959999
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | |||    
T  31959836 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaata 31959935  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  31959936 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 31959999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 51550271 - 51550433
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||  ||| ||||||  ||||||| |||| |||| |||| ||||||||| |||||||||||| |||||||| ||||||||||||||| | |||    
T  51550271 ccactaagtgcagtcagctacaaaaatcaaatgacgacataatgttctatcaaaagtcatgtctttctc-aactcatttatctctagatccttcctaata 51550369  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |  ||||| || | ||||| |||||| || |||||| ||||||| ||||||  |||||||||||    
T  51550370 gcatctcttatggtttttccaggtctacccctacctttagtgatctgactcccctccatctgat 51550433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 8286699 - 8286562
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||| ||||| || |||  | |   || |||||||||| ||||| ||||||  | ||     
T  8286699 ccactaagtgggggcggctacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcattgacctctaaatcctttctaatg 8286600  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  8286599 gtttctctaatagttttcctaggtcttcctctacctct 8286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 26356809 - 26356720
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatc 159  Q
    |||||||| ||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||||||||||||  |||||||    
T  26356809 aactcattaatctctagatccttcataacagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatc 26356720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32479298 - 32479161
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||| | ||  || |||||||||| ||||| ||| ||  | ||     
T  32479298 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcattgacctctaaatcttttctaatg 32479199  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||| ||| |||||| |||||||||| ||||||||    
T  32479198 gtttctcgaatggttttcttaggtcttcctctacctct 32479161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 42639042 - 42639202
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||| ||||| |||||||||||| | |||||| |||| |||| |||||||  |||| | | | || |||||||| ||| ||||||| ||||| |||    
T  42639042 ccactaagcggggttggctacatgaattacacgacgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaata 42639141  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    ||||||||   |||||| |||| | |||| |||||||||||||||||||||  ||||||||    
T  42639142 gtttctcttgcagtttttctagatattcctctacctctagtgatttgactcccctccatct 42639202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4441113 - 4440950
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  4441113 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 4441014  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  4441013 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 4440950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39708693 - 39708530
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||| ||||||| ||||||  ||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  39708693 ccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 39708594  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||| ||||||||  |||  ||||||| |||||||||||    
T  39708593 gtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgat 39708530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35622698 - 35622783
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctcta 86  Q
    ||||||||||||||| ||||| |||||||||||| | | ||| ||| |||||||| ||||||||||||| |||||||| |||||||    
T  35622698 ccactaagtggggtcagctacctgaatcaaacgatgccctagcgttctatcaaaaaccatgtctttctccaactcatttatctcta 35622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25257618 - 25257719
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||| || ||||||||||||||||||||||||| | ||   |||| ||||||||  |||||||||||  |||||||||||||||||||| || ||||||    
T  25257618 ccactcagaggggtcggctacatgaatcaaacgatgccaa--tgttctatcaaaaaacatgtctttcttcaactcattgatctctagatcttttttgata 25257715  T
Q  101 gttt 104  Q
    ||||    
T  25257716 gttt 25257719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8598963 - 8599090
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||| |||||||  || | | | | || |||||||| |  | |||||| ||||| |||    
T  8598963 ccactaagtggcgtcggctacatgaatcaaacgacgccataatgttctatcaaataccttatttctttctaactcattaacatttagatctttcttaata 8599062  T
Q  101 gtttctctaatag-ttttctaggtcttc 127  Q
    |||||||| |||| ||||||||||||||    
T  8599063 gtttctcttatagtttttctaggtcttc 8599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 21237118 - 21236955
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  21237118 ccactaagtggggttggctacatgtatcaaatgacgccatagtgttctatcatataccaaatttggatccaactcattgacctctaaatcctttctaatg 21237019  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  21237018 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 21236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33190870 - 33191033
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||| |||||||||||||||||  ||||| |||||||||||||| ||||| |  |||  | |   |  |||||||||| ||||| ||||||  | ||     
T  33190870 ccactaggtggggtcggctacatgggtcaaatgacgtcatagtgttctatcatacaccaaatttggattcaactcattgacctctaaatcctttctaatg 33190969  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | ||||||||||||||| ||||    
T  33190970 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactcttctccatttgat 33191033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 52569537 - 52569700
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  52569537 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 52569636  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||| ||||||||||| |||||||||| ||||||||  | | |||||||| |||||| ||||    
T  52569637 gtttctttaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgat 52569700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 56375550 - 56375392
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||| ||||| |  |||  | |   || |||||||| | ||||| ||||||  | ||     
T  56375550 ccactaagtgaggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattcacctctaaatcctttctaatg 56375451  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccat 158  Q
    |||||||||||||||||| |||||||||| ||||||||  | | |||||||| ||||||    
T  56375450 gtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccat 56375392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40018211 - 40018360
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||||||| | || |||| ||||| |   ||| ||  | || |||||||||||||||||||| ||||| | |    
T  40018211 ccactaagtggggtcggctacatggatcaaacgacgccgtaatgttctatcatatatcatatccctatccaactcattgatctctagatctttcttaaca 40018310  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||| ||| |||| ||||||| |||||    | |||||||||||||||||    
T  40018311 gtttttcttatagtttttctaagtctttatttgcctctagtgatttgact 40018360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 35690531 - 35690371
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| |||| |||| ||||| || || ||  |   ||||||||||| | ||||| ||  ||| | |||    
T  35690531 ccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactcattaacctctaaatttttcgtaata 35690432  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||| |||||||| ||||||||||| ||||||||  |||| ||||| | ||||||||    
T  35690431 gtttctcttatagtttttctaggtcttcctctacctcttttgatctgactttcctccatct 35690371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6958260 - 6958319
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||| ||||    
T  6958260 ccactaagtagggtcggctacatgaatcaaacgacgccatagtgttctatccaaaaccat 6958319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48174115 - 48174278
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||| |||||| |||| |||| |||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  48174115 ccactaagtggggtctgctacatggatcaaatgacgccataatgttttatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 48174214  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||||||||| |||||||||| ||||||||  | | |||||||| |||||| ||||    
T  48174215 gtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgat 48174278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48622565 - 48622728
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| || ||| |||| ||||||||| ||||| |  |||  | |   ||||||||||||| ||||| ||| ||  | ||     
T  48622565 ccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcattgacctctaaatcttttctaatg 48622664  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
     |||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  48622665 atttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 48622728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 6318920 - 6318838
Alignment:
Q  12 ggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttc 94  Q
    |||||| |||||||||||||||||  ||||| ||| |||||||| |||||| |||||| || |||||  ||||||||||||||    
T  6318920 ggtcggttacatgaatcaaacgacaccatagagttctatcaaaaaccatgtttttctccaattcatttttctctagatccttc 6318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27450202 - 27450256
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||    
T  27450202 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaa 27450256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 45569101 - 45569175
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagt-tttctaggtcttccactacctctagtgatt 144  Q
    |||||||||||||||||||  ||||| ||||||||||| ||| | |||||||||||||| || ||||||||||||    
T  45569101 aactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctctagtgatt 45569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 38903807 - 38903888
Alignment:
Q  68 tcaaactcattgatctctagatccttcttgatagtttctctaatagttttctaggtcttccactacctctagtgatttgact 149  Q
    ||||||||||| |||| ||| || ||||| ||||||||||| ||||||||||||||||||  || |||||||  ||||||||    
T  38903807 tcaaactcattaatctttaggtctttcttaatagtttctcttatagttttctaggtcttcatctgcctctagccatttgact 38903888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 47147563 - 47147470
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||||||||||| ||||| |||||||||   |||||||| ||||||||||| || |||||||||||  ||||  ||||||||||||    
T  47147563 aactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctctagtgatccgactactctccatctgat 47147470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49939756 - 49939809
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaa 54  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||    
T  49939756 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaa 49939809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6957858 - 6957730
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| ||||| |   ||  | |   || |||||||||| ||||| ||||||  | ||     
T  6957858 ccactaagtgggatcggctacatggatcaaatgacgtcatagtgttctatcatacatcaaatttggatccaactcattgacctctaaatcctttctaatg 6957759  T
Q  101 gtttctctaatagtttt-ctaggtcttcc 128  Q
    ||||||||||||||||| |||||||||||    
T  6957758 gtttctctaatagttttcctaggtcttcc 6957730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 12494923 - 12494795
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||| || ||| |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  12494923 ccactaagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 12494824  T
Q  101 gtttctctaatagtttt-ctaggtcttcc 128  Q
    ||||||||||||||||| |||||||||||    
T  12494823 gtttctctaatagttttcctaggtcttcc 12494795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20999260 - 20999132
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||| |||||||||||||||| | |||||||||||||||| || | || || | ||||| | ||| |  |||||||| | ||||||||| ||||| |||    
T  20999260 ccactgagtggggtcggctacaaggatcaaacgacgtcataatgctctaccatatgccatatatttattcaactcattaaactctagatctttcttaata 20999161  T
Q  101 gtttctctaatag-ttttctaggtcttcc 128  Q
    |||| | | |||| |||||||||||||||    
T  20999160 gtttatattatagtttttctaggtcttcc 20999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26024872 - 26024988
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| ||||||||||||| || |||  ||  |||| |||| ||||| || ||||||||   || |||||||| ||||||||||| ||||| |||    
T  26024872 ccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaatctctagatctttcttaata 26024971  T
Q  101 gtttctctaatagtttt 117  Q
    |||||||  ||||||||    
T  26024972 gtttctcatatagtttt 26024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 37042686 - 37042798
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||| |||||||||||||| ||||||||||  |||| |||| |||||||  || | | | | || |||||| | ||||||||||| ||||| |||    
T  37042686 ccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataatctctagatctttcttaata 37042785  T
Q  101 gtttctctaatag 113  Q
    |||||||| ||||    
T  37042786 gtttctcttatag 37042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 436489 - 436326
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| || | ||||||||| ||||| |  |||  | |   |  |||||||||| ||||| ||||||  |  |     
T  436489 ccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggattcaactcattgacctctaaatcctttctagtg 436390  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  436389 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 436326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 1777043 - 1777202
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||||||||||| |||||| |||| |||| |||| ||||| |  |||  | |   || |||||||||| ||||| ||| ||  | || ||||    
T  1777043 taagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttctaatggttt 1777142  T
Q  105 ctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  1777143 ctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 1777202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 7682002 - 7682081
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| |||| |||||  ||||||||||||||||| |||| ||||| ||||||||| || ||||||||||| |||||    
T  7682002 aactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtcttcctctgcctctagtgatgtgact 7682081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 18966860 - 18966721
Alignment:
Q  6 aagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttc 105  Q
    |||||||||||||||||||||||||||| || |||| |||| | ||| |   ||| |||   || | |||| | |||| |||||| ||||| ||||||||    
T  18966860 aagtggggtcggctacatgaatcaaacggcgccataatgttttgtcatatatcatatctcaatccagctcactaatctgtagatctttcttaatagtttc 18966761  T
Q  106 tctaatagtt-ttctaggtcttccactacctctagtgatt 144  Q
    ||| |||||| || |||||||||  |||||||||||||||    
T  18966760 tcttatagttgttttaggtcttcttctacctctagtgatt 18966721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23906319 - 23906446
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  23906319 ccactaagtggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 23906418  T
Q  101 gtttctctaatag-ttttctaggtcttc 127  Q
    ||||||||||||| ||||||||||||||    
T  23906419 gtttctctaatagtttttctaggtcttc 23906446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36556782 - 36556857
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactca 76  Q
    |||| |||||||||||| |||| ||||||||| ||| ||||||||  |||||||| ||||| ||||||| ||||||    
T  36556782 ccacaaagtggggtcgggtacacgaatcaaacaacgccatagtgtcctatcaaaaaccatgcctttctccaactca 36556857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51811301 - 51811359
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| |||||||| ||||    
T  51811301 ccactaagtggg-tcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccat 51811359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32633428 - 32633482
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||| ||||||||    
T  32633428 ccactaagtggggttggctacatgtatcaaatgacgccatagtgttctatcaaaa 32633482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5367742 - 5367673
Alignment:
Q  1 ccactaagtggggtcgg-ctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctc 69  Q
    |||||||||||| |||| ||||||||||||||||||  ||| ||||| ||||||||  ||||||||||||    
T  5367742 ccactaagtgggttcgggctacatgaatcaaacgacaccatcgtgttctatcaaaaatcatgtctttctc 5367673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33227469 - 33227332
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||| ||||| ||||||||||| |||||| |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  33227469 ccactaggtgggatcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 33227370  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||| |||||||||||| ||||||||||  ||||||||    
T  33227369 gtttttctaatagttttcctaggtcttcatctacctct 33227332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 934523 - 934598
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttg 146  Q
    |||||||| ||||||||| | ||||| |||||||||||||||| ||||||| ||||||| || ||||||||| ||||    
T  934523 aactcattaatctctagaactttcttaatagtttctctaatagtttttcta-gtcttcctctgcctctagtgttttg 934598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 21528548 - 21528420
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| | |  ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  21528548 ccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatg 21528449  T
Q  101 gtttctctaatagttttc-taggtcttcc 128  Q
    ||||||| ||| |||||| ||||||||||    
T  21528448 gtttctcgaatggttttcttaggtcttcc 21528420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 49738642 - 49738731
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || |||||||||||||| ||||||| | | |||| |||||||||||||    | |||||||||||||||||| |||| |||||||    
T  49738642 aactcattaatttctagatccttcttaatagtttttattatagtttttctaggtctt----tgcctctagtgatttgactcatctctatctgat 49738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 50679694 - 50679606
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccat 158  Q
    |||||||||| ||||| ||||||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| ||||||    
T  50679694 aactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccat 50679606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19061957 - 19062008
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||||| |||||    
T  19061957 ccactaggtggggtcggctacatggatcaaatgacgccatagtgttctatca 19062008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19969441 - 19969390
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||| ||| |||||    
T  19969441 ccactaagtggggtcggctacatggatcaaatgacgccatagcgttctatca 19969390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 21879245 - 21879320
Alignment:
Q  71 aactcattgatctctagatccttcttg-atagtttctctaatagttttctaggtcttccactacctctagtgattt 145  Q
    |||||||| ||||||||||| |||||| ||||||||||| ||||||||   |||||||| | |||||| |||||||    
T  21879245 aactcattcatctctagatctttcttgaatagtttctcttatagttttacgggtcttcctcgacctctggtgattt 21879320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26037527 - 26037690
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||| ||  ||| ||||||||| ||||| || |||| | |   || |||||||| | ||||| ||| ||| | |||    
T  26037527 ccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattcacctctaaatctttcctaata 26037626  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || ||||| |||||| |||| || |||||  | |  ||||||| |||||||||||    
T  26037627 gtttctcttatggttttcctaggttttcctctgcctcttttaacctgactctcctccatctgat 26037690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31339784 - 31339733
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||||||||||||| |||||| | |||||||||||||| |||| |||||    
T  31339784 ccactaagtggggtcggatacatggaccaaacgacgtcataatgttctatca 31339733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7066521 - 7066574
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    ||||||| ||||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  7066521 ccactaaatggggtcagctacatgaatcaaatgacg-catagtgttctatcaaaa 7066574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 20192193 - 20192127
Alignment:
Q  101 gtttctctaatagttttct-aggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    ||||||||||||||||| | ||||||||||||||||||  | | |||||||| |||||| |||||||    
T  20192193 gtttctctaatagttttttcaggtcttccactacctcttttaacttgactctcctccatttgatata 20192127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 26025011 - 26025081
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagt 140  Q
    |||||||| ||||||||||| ||||| |||||||||| || |||||| | ||||||||| || ||||||||    
T  26025011 aactcattaatctctagatctttcttaatagtttctcaaaaagttttaccaggtcttcctctgcctctagt 26025081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26357019 - 26356953
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttc 67  Q
    |||||||||||||  |  |||||||||||||||||  ||||||||| | |||||| |||||||||||    
T  26357019 ccactaagtggggctgattacatgaatcaaacgacaacatagtgttctttcaaaaaccatgtctttc 26356953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45184155 - 45184302
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||| ||  |||||||| |||| ||| | || |||||  |   |  |||||||| ||||||  ||| ||| | |||    
T  45184155 ccactaagtggggtcggctacatgaatcgaattacgtcataatgttttattataaaccatgagtaaattcaactcattaatctctttatctttcataata 45184254  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||  ||| |||| ||||||||||||||| |||||||| |||||| ||||    
T  45184255 gtt--tcttatagtttttctaggtcttcctctacctcttgtgattagact 45184302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 49987577 - 49987519
Alignment:
Q  92 ttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    ||||| ||||||||||| |||||||| ||||||||||| || |||||||||| ||||||    
T  49987577 ttcttaatagtttctcttatagtttttctaggtcttcctctgcctctagtgaattgact 49987519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50238637 - 50238679
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagt 43  Q
    |||||||||||||||||||||||| |||||| |||| ||||||    
T  50238637 ccactaagtggggtcggctacatggatcaaatgacgccatagt 50238679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50238723 - 50238765
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagt 43  Q
    |||||||||||||||||||||||| |||||| |||| ||||||    
T  50238723 ccactaagtggggtcggctacatggatcaaatgacgccatagt 50238765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 53708054 - 53707888
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||  |||| ||| ||| |||||| |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  53708054 ccactaagtgatgtcgactaaatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 53707955  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    ||||||||||||||||| || |||||||| ||||||||  | | |||||| | |||||| |||||||    
T  53707954 gtttctctaatagttttcctcggtcttcctctacctcttttaacttgactatcctccatttgatata 53707888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 28351749 - 28351656
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||| | ||||||| ||| ||| | ||||||||||| |||||||| ||||||||| | |||||||| || || ||||| | |||||||||||    
T  28351749 aactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctccatctgat 28351656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 40268364 - 40268433
Alignment:
Q  80 atctctagatccttcttgatagtttctctaatagttttctaggtcttccact-acctctagtgatttgac 148  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||| ||||| ||  || |||||||||||||    
T  40268364 atctctagatttttcttaatagtttctcttatagttttctaggccttcctctgccccctagtgatttgac 40268433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 41009469 - 41009534
Alignment:
Q  98 atagtttctctaatagttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| ||||||||| ||||||||| ||||| ||  |||  ||||||| |||||||||||    
T  41009469 atagtttctcttatagttttccaggtcttcctctaccacttttgacctgactctcctccatctgat 41009534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42619127 - 42619094
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacga 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  42619127 ccactaagtggggtcggctgcatgaatcaaacga 42619094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 53540550 - 53540401
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||| |||||||| ||||| ||| ||||||  | | |||| |||| ||||| || |||| | ||| || |||||||| ||||| |  || ||| | |||    
T  53540550 ccactcagtggggttggctatatggatcaaattatgccataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaata 53540451  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    |||| ||| |||||||| ||||||||||| || ||||||||||| |||||    
T  53540450 gtttatcttatagtttttctaggtcttcctctgcctctagtgatctgact 53540401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 883388 - 883436
Alignment:
Q  7 agtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||| || ||| || ||||||||||| ||||||||    
T  883388 agtggggtcggctacatggattaaatgatgtcatagtgttctatcaaaa 883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 7544612 - 7544652
Alignment:
Q  68 tcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    
T  7544612 tcaaactcattaatctctagatctttcttaatagtttctct 7544652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 43434113 - 43434021
Alignment:
Q  72 actcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||| ||||| ||| || |  || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  43434113 actcattgacctctaaatcattttcaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 43434021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44047392 - 44047424
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  44047392 ccactaagtggggttggctacatgaatcaaacg 44047424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45209227 - 45209267
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    |||||||||||||||||||||||| ||||||| ||| ||||    
T  45209227 ccactaagtggggtcggctacatggatcaaactacgccata 45209267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49686953 - 49686913
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    ||||||||||||||||||||||||  |||||||||| ||||    
T  49686953 ccactaagtggggtcggctacatggttcaaacgacgccata 49686913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 52227918 - 52227962
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||| || |||||||||||| |||||||||||| |||||||||    
T  52227918 cactaaatgaggtcggctacataaatcaaacgacgccatagtgtt 52227962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 53517717 - 53517641
Alignment:
Q  74 tcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    ||||| |||||||| || || |||||||||||||| | |||||| ||| ||||||| || ||||||||||| |||||    
T  53517717 tcattaatctctagttcttttttgatagtttctcttacagtttttctaagtcttcctctgcctctagtgatctgact 53517641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 55008006 - 55007966
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    |||||||||||||||||||||||| ||||||  ||||||||    
T  55008006 ccactaagtggggtcggctacatggatcaaattacgtcata 55007966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 5759019 - 5759180
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    ||||||||||||| ||||| |||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5759019 actaagtggggtcagctacctgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttctccaactcattgatctctagatccttcttggtagt 5759118  T
Q  103 ttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| |||||||||| || | |||||||||||||||||| ||  |||||||||||    
T  5759119 ttctctaatagtttttctaggtatttccctacctctagtgatttgattcccctccatctgat 5759180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44437743 - 44437903
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| |||||||| |||||| |||||| |||||||| ||||||||||||||||| |||    
T  44437743 ccactaagtggggtcggctacatgaattaaacaacgccatagtgttctatcaaaaaccatgtttttctccaactcatttatctctagatccttcttaata 44437842  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||  |||| |||||||||||| || |||||||||||||| ||||||  ||||||||    
T  44437843 gtttctcatatagtttttctaggtctacccctacctctagtgatctgactcccctccatct 44437903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12489824 - 12489967
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||| |||||||| ||||||||||||||| | |||    
T  12489824 ccactaagtggggtcggctacatgaatcaaacgacgccaaagtgttatatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaata 12489923  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    |||||||  |||| |||||||||||| || |||| |||||||||    
T  12489924 gtttctcatatagtttttctaggtctacccctacttctagtgat 12489967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42543495 - 42543332
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||| |||||||||||||||||| ||| ||||| ||| ||||||||  || ||||||||| |||||||| ||||||||||||||| | |||    
T  42543495 ccactaagtggggccggctacatgaatcaaacaacgccatagcgttctatcaaaaagcacgtctttctccaactcatttatctctagatccttcctaata 42543396  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||| |||||||||||| || |||||||||||||| ||||||  |||||| ||||    
T  42543395 gtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatttgat 42543332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 4598587 - 4598726
Alignment:
Q  4 ctaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtt 103  Q
    ||||||||  |||| ||||||||||||| |||| ||||||||| |||||||| | ||||||||||| |||||||| ||||||||||||||| | |||| |    
T  4598587 ctaagtggaatcggttacatgaatcaaatgacgccatagtgttctatcaaaatctatgtctttctccaactcatttatctctagatccttcctaatagct 4598686  T
Q  104 tctctaatag-ttttctaggtcttccactacctctagtga 142  Q
    ||||  |||| |||||||||| | ||||||||||||||||    
T  4598687 tctcgtatagtttttctaggtttaccactacctctagtga 4598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12470919 - 12471018
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  12470919 ccactaaatggggtcggctacatgaagcaaacgacgccatagtgatatatcaaaaaccatgtctttctccaactcatttatctctagatccttcatgata 12471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 20129627 - 20129726
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| || | |||||| |||||| || ||||| |||||||||| ||||||||||||||    
T  20129627 taagtcgggtcggctacatgaatcaaacgacgtcatagtgttatattaacaaccatgtatttctccaattcattaatctctagattcttcttgatagttt 20129726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28960233 - 28960350
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||| |||| ||||||||||||||||||  ||||||| | |||||||| |||| |||||||| |||||||| ||||||||||||||||| | |    
T  28960233 ccactaaatggagtcgactacatgaatcaaacgacaccatagtgctctatcaaaaaccatatctttctccaactcatttatctctagatccttcttaaca 28960332  T
Q  101 gtttctc-taatagtttt 117  Q
    ||||||| ||||||||||    
T  28960333 gtttctcttaatagtttt 28960350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19235006 - 19235169
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| || ||||||||| || |||||||| || | |||| |||||||  |||| | | | || || ||||| ||||||||||| ||||  |||    
T  19235006 ccactaagtggagttggctacatggattaaacgacgacagaatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaata 19235105  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||    
T  19235106 gtttctcttatagtttttctaggtcttcctctatctctagtgatttgactcccctccatctgat 19235169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19334174 - 19334241
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttct 68  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  19334174 ccactaagtggagtcggctacatgaatcaaatgacgtcatagtgttctatcaaaaaccatgtctttct 19334241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28508938 - 28508775
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||  | |   || |||||||||| ||||| ||||||  | ||     
T  28508938 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctctaaatcctttctaatg 28508839  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| |||| |||  | | |||||||| |||||| ||||    
T  28508838 gtttctctaatagttttcctaggtcttcctctacatcttttaacttgactctcctccatttgat 28508775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 37481641 - 37481802
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    |||| ||||||||| ||| |||||||||| |||  |||| | || |||||||  |||| | ||| || |||||||| ||| ||||||| ||||| |||||    
T  37481641 actacgtggggtcgactagatgaatcaaaagacaccataattttctatcaaataccatatttttatccaactcatttatcgctagatctttcttaatagt 37481740  T
Q  103 ttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| |||||| |||||||  ||||||| |||||| | ||||  |||||||||||    
T  37481741 ttctctaatagtttttcttggtcttcatctacctccagtgatctaactcccctccatctgat 37481802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 43832356 - 43832195
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    ||||||| ||||| |||||||| |||||| | ||||||| |||| ||| | |   ||| || || || |||||||| ||||||||||||||||| |||||    
T  43832356 actaagttgggtcagctacatggatcaaatgccgtcataatgttctataatacatcatatccttatccaactcattaatctctagatccttcttaatagt 43832257  T
Q  103 ttctctaatagttt-tctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||| ||||||| | |||||||||| || | |||| |||||||| |  ||||||||||||    
T  43832256 ttctcttatagtttgtttaggtcttcctctgcgtctactgatttgattactctccatctgat 43832195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29968633 - 29968717
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctct 85  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||| |||  ||| ||||| ||||||| ||||| |||||||||    
T  29968633 ccactaagtggagtcggctacatgaatcaaacaacgccatagtgttctattgaaaaccatggctttctccaactcgttgatctct 29968717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 9556391 - 9556557
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| |||||||||||| ||||||  ||  | || |||| ||||| || |||| ||||  || |||||||| ||| ||||||| ||||| |||    
T  9556391 ccactaagtggagtcggctacatgtatcaaattacaccctaatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaata 9556490  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    |||| ||| |||| ||||| |||||||||  | ||||||||  ||||||| | ||||||||||||||    
T  9556491 gtttatcttatagtttttcaaggtcttcctttgcctctagtagtttgactatcctccatctgatata 9556557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 3866330 - 3866169
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    |||||||||||||||||||||| |||||| || ||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | || ||    
T  3866330 actaagtggggtcggctacatggatcaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggt 3866231  T
Q  103 ttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||| |||||| |||| ||||||||  | ||||| |||| |||||| ||||    
T  3866230 ttctctaatagttttcctaggttttcctctacctcttttaatttgtctctcctccatttgat 3866169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18424400 - 18424536
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||| ||| |||||| |||||| |||||||||||||| ||||| || |||| |     ||||||| ||||||||||| ||||||  | ||     
T  18424400 ccactaagtggggacgg-tacatggatcaaatgacgtcatagtgttctatcataaaccatattcggatcaaacttattgatctctaaatcctttataatg 18424498  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||| ||||||| ||||||||    
T  18424499 gtttctctaatagttttcctatgtcttcctctacctct 18424536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 38430143 - 38430011
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | || |    
T  38430143 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatgg 38430044  T
Q  102 tttctctaatagttttc-taggtcttccactac 133  Q
    |||||| ||| |||||| |||||||||| ||||    
T  38430043 tttctcgaatggttttcttaggtcttcctctac 38430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 2807685 - 2807589
Alignment:
Q  19 tacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    ||||| |||||||||| ||||||||||| |||||||   ||||| |||||| || ||||| |||||| |||||||||||||| ||||||| ||| ||||    
T  2807685 tacataaatcaaacgatgtcatagtgttctatcaaat--catgtatttctcgaattcattaatctctggatccttcttgataatttctcttataatttt 2807589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3635345 - 3635404
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||    
T  3635345 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccat 3635404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 26784432 - 26784511
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| ||||||| ||| ||||| ||||||||||| |||| ||||||||||||| | || |||||||||||||||||    
T  26784432 aactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctagtgatttgact 26784511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45367647 - 45367701
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||| ||||||||    
T  45367647 ccactaagtggggtcggcgacatggatcaaatgacgtcatagtgttctatcaaaa 45367701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 19225039 - 19224990
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  19225039 actaagtggggtcggctacatggatcaaacgacatcatagtgttctatca 19224990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 25834938 - 25834802
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| || |||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  25834938 ccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 25834839  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||||| ||| |||||| ||||||||||| ||||||||    
T  25834838 gtttctttaa-agttttcctaggtcttcctctacctct 25834802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 33594298 - 33594411
Alignment:
Q  5 taagtgggg-tcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtt 103  Q
    ||||||||| ||| |||||||| ||||||||| |||||||||| |||| ||| |||| |||||||| |||| ||| ||||||  ||| ||| | ||||||    
T  33594298 taagtggggatcgactacatgagtcaaacgacatcatagtgttctatccaaaaccatttctttctccaacttatttatctctgtatctttcataatagtt 33594397  T
Q  104 tctctaatagtttt 117  Q
    ||||| ||| ||||    
T  33594398 tctcttataatttt 33594411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 35643208 - 35643071
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| || ||| || ||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  35643208 ccactaagtggggtcggctacatgtattaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 35643109  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||| | ||||||||    
T  35643108 gtttctctaatagttttcctaggtctttctctacctct 35643071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 38452708 - 38452845
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||| || |||  ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  38452708 ccactaagtggggtcggctacatggatcgaatgacaccatagtgttttatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 38452807  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  38452808 gtttctctaatagttttcctaggtcttcctctacctct 38452845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 2610847 - 2610711
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||||| |||||| ||||||  ||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | || |    
T  2610847 cactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatgg 2610748  T
Q  102 tttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  2610747 tttctctaatagttttcataggtcttcctctacctct 2610711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33287681 - 33287553
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| || ||||||| | ||||||| | |||||| |||| ||||| || |||| | |   || |||||||| || |||||||| ||||| |||    
T  33287681 ccactaagtggagttggctacaaggatcaaactatgtcataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaata 33287582  T
Q  101 gtttctctaatag-ttttctaggtcttcc 128  Q
    |||||||| |||| |||||||||||||||    
T  33287581 gtttctcttatagtttttctaggtcttcc 33287553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 227449 - 227398
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  227449 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 451670 - 451721
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  451670 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 451721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3243675 - 3243838
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||| || |||||| |||| ||||||||| ||||| |  |||    |   || |||||||||| ||||| ||||||  | ||     
T  3243675 ccactaagtggggtcggctacctggatcaaatgacgccatagtgttctatcatacaccaaacttggatccaactcattgacctctaaatcctttctaatg 3243774  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| || |||||  | | |||||||| |||||| ||||    
T  3243775 gtttctctaatagttttcctaggtcttcctctgcctcttttaacttgactctcctccatttgat 3243838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12474949 - 12475000
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  12474949 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 12475000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30306292 - 30306241
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  30306292 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 30306241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38435212 - 38435049
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| ||||||||||| ||||||  ||| |||| ||||  |||| || |||  | |   || ||| |||| ||||||||||| ||||| |||    
T  38435212 ccactaagtgggatcggctacatggatcaaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaatctctagatctttcttaata 38435113  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||  ||| |||||||||||| || || ||||||||||| ||||| | |||||| ||||    
T  38435112 gtttctcttgtagtttttctaggtctacctctgcctctagtgatctgactatcctccatatgat 38435049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4807855 - 4807805
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatc 51  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||    
T  4807855 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatc 4807805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 7431981 - 7432027
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||    
T  7431981 aactcattaatctctagatccttcttaatagtttctccaatagtttt 7432027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 12734960 - 12734826
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||| ||||||| ||||||  ||  ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  12734960 ccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 12734861  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacc 134  Q
    ||||||||||||||||| |||||||| || |||||    
T  12734860 gtttctctaatagttttcctaggtctccctctacc 12734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15025754 - 15025688
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttc 67  Q
    ||||||||| |  ||||||||||||||||||||| | ||||||||| |||||||| | |||||||||    
T  15025754 ccactaagttgcatcggctacatgaatcaaacgatgccatagtgttctatcaaaaactatgtctttc 15025688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7326182 - 7326319
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||| ||  | ||     
T  7326182 ccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcatttctaatg 7326281  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||| ||||||| ||||||||    
T  7326282 gtttctctaatagttttcctatgtcttcctctacctct 7326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17670728 - 17670683
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||    
T  17670728 ccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 17670683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 31386862 - 31386958
Alignment:
Q  11 gggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    |||| ||||| |||||||||||||| | |||||| | |||||||| || | | ||| || |||||||| ||||||||||| ||| |||||||||||||    
T  31386862 gggttggctatatgaatcaaacgacattatagtgct-tatcaaaaaccgtatttttatccaactcattaatctctagatcattcatgatagtttctct 31386958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 32541820 - 32541861
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  32541820 taagtggggtcggctacatgaatcaaacgaccccatagtgtt 32541861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37470155 - 37470304
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| |  |||||||| ||||||| ||  |||| |||| ||||| | ||||| | |   || |||||||| |||||||||||  || | |||    
T  37470155 ccactaagtgggattagctacatggatcaaactacaccataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaata 37470254  T
Q  101 gtttctctaatagttttct-aggtcttccactacctctagtgatttgact 149  Q
    |||||||| |||||||| | ||||||||| ||||| |||||||| |||||    
T  37470255 gtttctcttatagttttttcaggtcttcctctaccactagtgatctgact 37470304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12026034 - 12026153
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||| |||||||||||| ||| | || ||||| |       | | | ||||||||||| ||||||||||| ||||| |||    
T  12026034 ccactaagtggggtcagctacatggatcaaacgacgttataatattttatcata-------tttctatcaaactcattaatctctagatctttcttaata 12026126  T
Q  101 gtttctctaatagttt-tctaggtctt 126  Q
    |||||||  ||||||| ||||||||||    
T  12026127 gtttctcctatagtttctctaggtctt 12026153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 33504404 - 33504320
Alignment:
Q  80 atctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| ||||| ||||||||||| |||| |||||||||| || | || ||||||||||| |||||   |||||||||||    
T  33504404 atctctagatctttcttaatagtttctcttatagtttttctaggtttttctctgcctctagtgatctgactaccctccatctgat 33504320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8197563 - 8197670
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||| |||||||||||||| ||||||||||| |||| | || ||||| |   ||| | | | || |||||||| |||| |||||| ||||| |||    
T  8197563 ccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaata 8197662  T
Q  101 gtttctct 108  Q
    ||||||||    
T  8197663 gtttctct 8197670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8202323 - 8202430
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||| |||||||||||||| ||||||||||| |||| | || ||||| |   ||| | | | || |||||||| |||| |||||| ||||| |||    
T  8202323 ccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaata 8202422  T
Q  101 gtttctct 108  Q
    ||||||||    
T  8202423 gtttctct 8202430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12520084 - 12520135
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| |||||    
T  12520084 ccactaagtggggtcggctacatggatcaaattacgccatagtgttttatca 12520135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 23997858 - 23997803
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    ||||||||||||| |||||||||||||  ||| ||||||||| |||||||| ||||    
T  23997858 taagtggggtcggatacatgaatcaaataacgccatagtgttttatcaaaaaccat 23997803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38328392 - 38328443
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| || | ||||||||| |||||    
T  38328392 ccactaagtggggtcggctacatggatcaaatgaagccatagtgttctatca 38328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 17429309 - 17429259
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||||||||||||||||||||||||||  | |||||| |||| |||||    
T  17429309 cactaagtggggtcggctacatgaatcaaattatgtcataatgttctatca 17429259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 26670958 - 26670888
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagttttc-taggtcttccactacctctagt 140  Q
    |||||||| ||||||| ||| ||||| ||||||||| | ||||||||  |||||||||| |||||||||||    
T  26670958 aactcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctctacctctagt 26670888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 19024368 - 19024287
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtt-ttctaggtcttccactacctctagtgatttgactct 151  Q
    |||||||| |||| |||||| ||||| ||||||||||| || ||| ||||| | |||||  |||||||| ||||||||||||    
T  19024368 aactcattaatctttagatctttcttaatagtttctcttatggttcttctacgccttcctatacctctaatgatttgactct 19024287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 24101779 - 24101808
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaac 32  Q
    ||||||||||||||||||||||||||||||    
T  24101779 actaagtggggtcggctacatgaatcaaac 24101808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 31959779 - 31959654
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    ||||||||||||| |||||||| ||||||  | | ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | || ||    
T  31959779 actaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggt 31959680  T
Q  103 ttctctaatagtttt-ctaggtcttc 127  Q
    |||||| |||||||| ||||||||||    
T  31959679 ttctcttatagttttcctaggtcttc 31959654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39709223 - 39709268
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||||    
T  39709223 ccactaagtggggtcggctacatggatcaaattacgccatagtgtt 39709268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 36183641 - 36183553
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccat 158  Q
    ||||||||||  |||| ||||||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| ||||||    
T  36183641 aactcattgacttctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccat 36183553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37351667 - 37351504
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || ||||| |||| |||||||| | |||||| ||||||||||| ||||||||     
T  37351667 ccactaagtggggtcggctacatgaatcaaacgacgtcgtagtgttctaacaaaaaccatatctttctccatctcattaatctctagatctttcttgatt 37351568  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| |||   ||||||||||    
T  37351567 gtttctctaatagtttttctaggtcttcccctacctctagtgatttgcctcccttccatctgat 37351504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 26990471 - 26990323
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagc-catgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||| |||||||||| || || | || || ||||||||   |||||||||||| ||||||||||||||||||||||||||||||    
T  26990471 cactaagtggggtcggctacgtgaatcaaacaacatcgt-gt-ttctatcaaaaaaacatgtctttctccaactcattgatctctagatccttcttgata 26990374  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactc 150  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  26990373 gtttctctaatagtttttctaggtcttcccctacctcgagtgatttgactc 26990323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 27893349 - 27893207
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| ||||||||||||||||||| | | ||||||||| | ||||||  |||||||||||| |||||||| |||||||| ||||| || |||    
T  27893349 ccactaagtgggatcggctacatgaatcaaacaatgccatagtgttctttcaaaaatcatgtctttctccaactcattaatctctaggtcctttttaata 27893250  T
Q  101 gtttctctaatagt-tttctaggtcttccactacctctagtga 142  Q
    |||||||| ||||| |||||||||||||| ||||||| |||||    
T  27893249 gtttctcttatagtctttctaggtcttcctctacctcaagtga 27893207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31454247 - 31454412
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||| |||||||| ||||||||||||| || ||||| || ||||||||||  || |||    
T  31454247 ccactaagtggggtcggctaaatgaatcaaatgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaatatctagatcctaattaata 31454346  T
Q  101 gtttctctaatag-ttttctaggtcttccactac--ctctagtgatttgactcttctccatctgat 163  Q
    ||||| || |||| ||||||||||| ||| ||||  |||||  ||||||||||  |||||||||||    
T  31454347 gtttcccttatagtttttctaggtcatcccctacatctctaaagatttgactcccctccatctgat 31454412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 50631903 - 50632041
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| |||| |||||||||||| | | |||| |||| |||||||||| |||||||| ||| ||| |||||||||||||||||||||||||    
T  50631903 ccactaagtggggttggctgcatgaatcaaacaatggcataatgttctatcaaaagctatgtctttgtcatactgattgatctctagatccttcttgata 50632002  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctcta 138  Q
    ||| || | ||||||||  ||||| |||| |||||||||    
T  50632003 gttactttcatagttttattaggttttcctctacctcta 50632041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31452983 - 31453088
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||||||||||||||| |||||| || | |||||| ||||||||||| | || ||||| || ||||||||||||||||||    
T  31452983 ccactaagtggggtctgctacatgaatcaaacgacgccatagtattatgtcaaaaaccatgtctttcaccaattcattaatatctagatccttcttgata 31453082  T
Q  101 gtttct 106  Q
    ||||||    
T  31453083 gtttct 31453088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 11581686 - 11581541
Alignment:
Q  19 tacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-tttt 117  Q
    ||||||||||||||||   |||| |||| ||| ||||  |||||||||||  |||||||| |||| |||||| ||||| ||||||||||| |||| ||||    
T  11581686 tacatgaatcaaacgataccataatgttctataaaaaatcatgtctttcttcaactcatttatctatagatctttcttaatagtttctcttatagttttt 11581587  T
Q  118 ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||   ||||||||||||||||||||  || ||||||||    
T  11581586 ctaggtcttctcatacctctagtgatttgactcacctacatctgat 11581541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 48508495 - 48508332
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  48508495 ccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattgacctctaaatcctttctaatg 48508396  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||| ||||||||  |||  ||||||| |||||||||||    
T  48508395 gtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgat 48508332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 5169092 - 5168955
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| || || ||||||  | ||     
T  5169092 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctataaatcctttctaatg 5168993  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||||||| |||||| |||||||||| ||||||||    
T  5168992 gtttctctaatggttttcttaggtcttcctctacctct 5168955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 52139060 - 52138902
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  52139060 ccactaagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 52138961  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccat 158  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| ||||||    
T  52138960 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccat 52138902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22332 - 22195
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||  |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||||||  | ||     
T  22332 ccactaagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcctttctaatg 22233  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||||||| |||||| || ||||||| ||||||||    
T  22232 gtttctctaatggttttcttaagtcttcctctacctct 22195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 43255078 - 43254989
Alignment:
Q  74 tcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctga 162  Q
    ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||| || |||||||||||||| |||||   ||||||||||    
T  43255078 tcatttatctctagatccttcctgatagtttctctcatagtttttctaggtctacccctacctctagtgatctgacttccctccatctga 43254989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3987594 - 3987519
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactca 76  Q
    |||| |||||||||||| |||||||||||||| ||| ||||||||  |||||||| ||||||||||||| ||||||    
T  3987594 ccacaaagtggggtcgggtacatgaatcaaacaacgccatagtgtcctatcaaaaaccatgtctttctccaactca 3987519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 47233618 - 47233745
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||| |||||||| |||| | |   || || ||||||| |||||  |||||  | ||     
T  47233618 ccactaactggggtcggctacatgaatcaaatgacgccatagtgttctatcaaaaaccatatttggatctaattcattgacctctaattcctttctaatg 47233717  T
Q  101 gtttctctaatagttttc-taggtcttc 127  Q
    |||||||||||||||||| |||||||||    
T  47233718 gtttctctaatagttttcttaggtcttc 47233745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 12096727 - 12096864
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  12096727 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 12096826  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||| |||||||||||| ||||||||||| ||||||||    
T  12096827 gtttttctaatagttttcctaggtcttcctctacctct 12096864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 53519839 - 53519786
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  53519839 cactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaa 53519786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 311331 - 311390
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||    
T  311331 ccactaagtggggtcggctacatgtatcaaatgacgccatagtgttctatcaaaaaccat 311390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 2340741 - 2340888
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    |||||||||||| |||| |||| ||||||| ||| |||| |||| ||||| |   |||  |  ||||  ||||||| ||||||||||| ||||| |||||    
T  2340741 actaagtggggttggcttcatggatcaaacaacgccataatgttctatcatatatcattaccctctccgactcattaatctctagatctttcttaatagt 2340840  T
Q  103 ttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    |||||| |||||||| ||||||||| | ||| || |||||||||||||    
T  2340841 ttctcttatagttttcctaggtctttctctagctttagtgatttgact 2340888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40273227 - 40273286
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||    
T  40273227 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccat 40273286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 31261055 - 31261113
Alignment:
Q  92 ttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||    
T  31261055 ttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgact 31261113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 21200738 - 21200645
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || |||||||| ||||  ||||||| |||||||||||| ||||||||||| || || ||||||||||||||  ||||||| ||||    
T  21200738 aactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtcttcctctccccctagtgatttgactactctccatgtgat 21200645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 28245696 - 28245531
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||| ||| | |  |||  | |   || |||||||||| ||||| ||| ||  | || |    
T  28245696 cactaagtgggatcggctacatggatcaaatgacgtcatagtgttctattatacaccaaatttggatccaactcattgacctctaaatcatttctaatcg 28245597  T
Q  102 tttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    |||||||||||||||| ||||||||||  ||||||||  | | |||||||| |||||| |||||||    
T  28245596 tttctctaatagttttcctaggtcttcatctacctcttttaacttgactctcctccatttgatata 28245531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 52156106 - 52156223
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||| | |||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  52156106 ccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 52156205  T
Q  101 gtttctctaatagttttc 118  Q
     |||||||||||||||||    
T  52156206 atttctctaatagttttc 52156223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 42510041 - 42510201
Alignment:
Q  4 ctaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtt 103  Q
    ||||||||||||||||||||| ||||||  ||| |||| ||||  |||| || |||| | ||  || |||||||| || || | ||| ||| | || |||    
T  42510041 ctaagtggggtcggctacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttcctaatggtt 42510140  T
Q  104 tctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||| |||||||| |||||||||||  | ||||||||||| ||||| | |||||||||||    
T  42510141 tctctgatagtttttctaggtcttcctttgcctctagtgatctgactatcctccatctgat 42510201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 20262423 - 20262502
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||||||||||||||| |||||||||| || ||| |||| |||| | |||||||| || ||||||||| |||||||    
T  20262423 aactcattgatctctagatctttcttgatagattatcttatagtttttattggtcttcctctgcctctagtgctttgact 20262502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31566183 - 31566242
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| |||  ||||||||| |||||||| ||||    
T  31566183 ccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcaaaaaccat 31566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 51447739 - 51447866
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||||| ||||||||||||||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  51447739 ccactaaatggggccggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 51447838  T
Q  101 gtttctctaatagtttt-ctaggtcttc 127  Q
    ||||||||||||||||| ||||||||||    
T  51447839 gtttctctaatagttttcctaggtcttc 51447866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53262401 - 53262342
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||  |||||| |||| ||||||||| |||||||| ||||    
T  53262401 ccactaagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccat 53262342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 45373392 - 45373311
Alignment:
Q  19 tacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||| || || |||||||| | | ||| ||| ||||||||||    
T  45373392 tacatgaatcaaacgacgccatagtgttctatcaaaa-ccatgtcgttatccaactcatttaccactaaatctttcttgatag 45373311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 54128639 - 54128501
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||| ||||||| ||||||  | | |||| |||| ||||| || |||| | |   || |||||||||| ||||| ||| ||| | |||    
T  54128639 ccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattgacctctaaatctttccttata 54128540  T
Q  101 gtttctct-aatagtttt-ctaggtcttccactacctct 137  Q
    |||||||| ||||||||| ||||||||||| ||||||||    
T  54128539 gtttctcttaatagtttttctaggtcttcctctacctct 54128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 38850379 - 38850330
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  38850379 actaagtggggtcggctacatggatcaaattacgtcatagtgttctatca 38850330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 46367413 - 46367497
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagat 89  Q
    |||||||||| ||||||||| |||||||||||||||| |||| ||||| |   ||| || || || |||||||| ||||||||||    
T  46367413 taagtggggtaggctacatggatcaaacgacgtcataatgttctatcatatatcatatccttatccaactcattcatctctagat 46367497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 7895906 - 7895953
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  7895906 taagtggggtcggctacatggatcaaatgacgccatagtgttctatca 7895953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25191637 - 25191578
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||| || |||||||| |||||| |||| ||||||||| |||||||| ||||    
T  25191637 ccactaagtgggatcagctacatggatcaaatgacgccatagtgttctatcaaaaaccat 25191578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 39600773 - 39600840
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctct 137  Q
    |||||||| | ||||| ||| ||||| ||||||||||| |||| ||||||||||||||| ||||||||    
T  39600773 aactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctct 39600840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47555354 - 47555405
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||| |||||    
T  47555354 ccactaagtggggttggctacatggatcaaatgacgccatagtgttctatca 47555405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 54279276 - 54279117
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||| ||||||||||  |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | || ||||    
T  54279276 taagtgggatcggctacattgatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 54279177  T
Q  105 ctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| ||||||||||  ||||||||  | | |||||||| |||||| ||||    
T  54279176 ctctaatagttttcctaggtcttcttctacctcttttaacttgactctcctccatttgat 54279117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 54365003 - 54365134
Alignment:
Q  7 agtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttct 106  Q
    |||| ||||||||||||| ||||||  ||||||||||||| ||||| || |||| | ||  || ||| |||| ||||| |  || ||| | |||||||||    
T  54365003 agtgtggtcggctacatggatcaaattacgtcatagtgttctatcataaaccatattttggtctaacacattaatctccaagtctttcctaatagtttct 54365102  T
Q  107 ctaatag-ttttctaggtcttccactacctct 137  Q
    || |||| ||||||||||||||| || |||||    
T  54365103 cttatagtttttctaggtcttcctctgcctct 54365134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 29475876 - 29475805
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    |||||||| ||||||||||| ||||| ||||||  ||| |||| ||||||||||||||| || |||||||||||    
T  29475876 aactcattaatctctagatctttcttaatagtt--tcttatagcttttctaggtcttcctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 33272145 - 33272211
Alignment:
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    |||||||||||||||||| |||||||||| ||||||||  | | |||||||| |||||| |||||||    
T  33272145 gtttctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatata 33272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 35033395 - 35033269
Alignment:
Q  12 ggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaat 111  Q
    ||||||||||||| ||||||  ||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | || ||||||| |||    
T  35033395 ggtcggctacatggatcaaataacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaat 35033296  T
Q  112 agttttc-taggtcttccactacctct 137  Q
     |||||| |||||||||| ||||||||    
T  35033295 ggttttcttaggtcttcctctacctct 35033269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 36820069 - 36820115
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    |||||||| ||||||||||| ||||| ||||||||||| ||||||||    
T  36820069 aactcattaatctctagatctttcttaatagtttctcttatagtttt 36820115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 38431011 - 38430945
Alignment:
Q  98 atagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||  ||||||| ||| ||||||| ||||||||  |||||||||||| |||||||||||    
T  38431011 atagtttctcttgtagtttttctaagtcttcctctacctcttttgatttgactctcctccatctgat 38430945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 49841806 - 49841729
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| |||| |||||| || || ||||||||||| ||  |||||| |||||||| ||||||||||| ||||||||    
T  49841806 aactcattaatctttagatctttgttaatagtttctcttatttttttct-ggtcttcctctacctctagtaatttgact 49841729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7278724 - 7278679
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||||||||||||||||| |||||| ||||| ||| ||||    
T  7278724 ccactaagtggggtcggctacatggatcaaatgacgttataatgtt 7278679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 11284160 - 11284115
Alignment:
Q  93 tcttgatagtttctctaatagttttctaggtcttccactacctcta 138  Q
    |||| ||||||||||| ||||||||||||||||||| |||| ||||    
T  11284160 tcttaatagtttctcttatagttttctaggtcttcctctacatcta 11284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 36304220 - 36304123
Alignment:
Q  7 agtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||||||||| ||||||  ||| |||| |||  ||||| || |||| | ||  || |||||||| ||||||||||| ||||| |||||||    
T  36304220 agtggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41530021 - 41529976
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||||    
T  41530021 ccactaagtggggtcggctacatggatcaaattacgccatagtgtt 41529976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34610507 - 34610467
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  34610507 ccactaagtggggtcggctaaatgaatcaaattacgtcata 34610467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48532218 - 48532166
Alignment:
Q  1 ccactaagtggggtcggctaca-tgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||| || |||||| |||| ||||||||| |||||    
T  48532218 ccactaagtggggtcggctacattggatcaaatgacgccatagtgttctatca 48532166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32043847 - 32043687
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| | ||||||||||||||| |  ||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  32043847 ccactaagtggggtcag-tacatgaatcaaacggc--catagtgttctatcaaaaaccatgtctttctccaactcattgatctttagatccttcttgata 32043751  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||| |  |||||||||||    
T  32043750 gtttctctaatagtttttttaggtcttcccctacctctagtgatttgacacccctccatctgat 32043687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16351637 - 16351475
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||| |||    
T  16351637 ccactaagtggggtcgtctacatgaatcaaacgatgccatagtgttctattaaaaaccatgtctttctc-aactcattaatctctagatccttcttaata 16351539  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| ||||||||||||||  ||| ||| ||||| |||||||  |||||||||||    
T  16351538 gtttctctaatagtttttctaggtcttctcctatctcaagtgacttgactcccctccatctgat 16351475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 7531668 - 7531829
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    |||||||| | ||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||| | |||||    
T  7531668 actaagtgagttcggctacatgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 7531767  T
Q  103 ttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||  |||| |||||||||||| ||  ||||||||||||| ||||||  |||||||||||    
T  7531768 ttctcgtatagtttttctaggtctacccttacctctagtgatctgactcccctccatctgat 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 39953286 - 39953429
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||   ||||||| |||||| |||||| |||||||| ||||||||||||||| | |||    
T  39953286 ccactaagtggggtcggctacatgaatcaaacaactccatagtgtcccatcaaaaaccatgtttttctctaactcatttatctctagatccttcctaata 39953385  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgat 143  Q
    ||||||||  ||||||| |||||||| || ||||||||||||||    
T  39953386 gtttctcttttagttttcctaggtctacccctacctctagtgat 39953429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30812838 - 30812976
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||| || |||||||| ||||||||||||||| | | |    
T  30812838 ccactaagtggggtcggctacatgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttttccaactcatttatctctagatccttcctaaca 30812937  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctcta 138  Q
    ||||||   |||| |||||||||||| || |||||||||    
T  30812938 gtttcttgtatagtttttctaggtctacccctacctcta 30812976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26685941 - 26686067
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| |||||||||||||||||| |  ||||||||| |||||||| ||||||||||||| |||||||  |||||||| |||| ||| | |    
T  26685941 ccactaagtggggttggctacatgaatcaaacggcaccatagtgttctatcaaaaaccatgtctttctccaactcatcaatctctaggtcctacttaaca 26686040  T
Q  101 gtttctctaatag-ttttctaggtctt 126  Q
    |||||||| |||| |||||||||||||    
T  26686041 gtttctcttatagcttttctaggtctt 26686067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 43733466 - 43733330
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||| |||| ||| | |  | ||| || |||||||| |||||||||||||||| ||||    
T  43733466 ccactaagtgggatcggctacatgaatgaaacgacgccatagtgttctatccaaaac-acatttttatccaactcattaatctctagatccttctcgata 43733368  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctct 137  Q
    ||||||||  ||| ||||||||||||||| ||||||||    
T  43733367 gtttctcttgtagtttttctaggtcttcctctacctct 43733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 38901849 - 38901956
Alignment:
Q  9 tggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    ||||||| ||||||||||||||| | || ||||||||| |||||||| ||||||||||||| || ||||| |||||||||| |||| | |||||||| ||    
T  38901849 tggggtccgctacatgaatcaaatgccgccatagtgttatatcaaaaaccatgtctttctccaaatcattaatctctagattcttcctaatagtttccct 38901948  T
Q  109 aatagttt 116  Q
     |||||||    
T  38901949 tatagttt 38901956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 79286 - 79138
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||||| |||||| ||||||||||| |||  |||| ||||| | ||||| | | | || | |||||| ||||||||||| ||||| ||||    
T  79286 cactaagtggggtcgggtacatggatcaaacgacgccattatgttctatcacaggccatatttctatccagctcattaatctctagatctttcttaatag 79187  T
Q  102 tttctctaatagt-tttctaggtcttccactacctctagtgatttgact 149  Q
    ||||||| ||||| |||||| | ||||| || | |||||||||||||||    
T  79186 tttctcttatagtgtttctaagccttcctctgcttctagtgatttgact 79138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11523745 - 11523908
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  11523745 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 11523844  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  11523845 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 11523908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 23492293 - 23492146
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    ||||||||||||||||||||||| || ||| |||  ||||||||| ||||| |   ||| | | | || |||||||| ||| ||| ||| ||||   |||    
T  23492293 cactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcattaatcgctacatctttctgagtag 23492194  T
Q  102 tttctctaatagttttctaggtcttccactacctctagtgatttgact 149  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||    
T  23492193 tttctctaatagttttctaggtcttcctctatatctagtgatttgact 23492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 30456323 - 30456432
Alignment:
Q  8 gtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctc 107  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||| | || |||||||| |||| | | || |||||||| ||  | ||||||||||    
T  30456323 gtggagtcggctacatgaatcaaacgacgccatagtgttctatcaaaaacaatatctttctcgaacttagttatatctagatcatttctaatagtttctc 30456422  T
Q  108 taatagtttt 117  Q
    | ||||||||    
T  30456423 ttatagtttt 30456432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36545409 - 36545276
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  36545409 ccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 36545310  T
Q  101 gtttctctaatagtttt-ctaggtcttccactac 133  Q
    ||||||||||||||||| ||||||||||| ||||    
T  36545309 gtttctctaatagttttcctaggtcttcctctac 36545276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 10079999 - 10080079
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagttt-tctaggtcttccactacctctagtgatttgactc 150  Q
    |||||||| ||||||||||| ||||| | ||||| ||| ||||||| |||||||||||| |||||||||||||||||||||    
T  10079999 aactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagtgatttgactc 10080079  T

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Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 36565263 - 36565426
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  36565263 ccactaagtggggtcggctacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 36565362  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  36565363 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 36565426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 12491160 - 12491297
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  12491160 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 12491259  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    |||||||||||||||||| |||||||||  ||||||||    
T  12491260 gtttctctaatagttttcataggtcttcatctacctct 12491297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 38178352 - 38178445
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || ||||| || || || ||||||||||| |||||||| ||||||||||| |||||||||| ||||||||| | |||||||||||    
T  38178352 aactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactatcctccatctgat 38178445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42854026 - 42854163
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| |||||||||||||||| |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  42854026 ccactaaatggggtcggctacatggatcaaatgacgccatagtgttatatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatg 42854125  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||| ||| |||||| |||||||||| ||||||||    
T  42854126 gtttctcgaatggttttcttaggtcttcctctacctct 42854163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 3079637 - 3079788
Alignment:
Q  11 gggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaa 110  Q
    |||||||||||||| ||||||| || ||||| |||  |||||||  |||| | | | || |||||||  ||| | ||||| ||||| ||||||||||| |    
T  3079637 gggtcggctacatggatcaaaccacttcataatgtc-tatcaaataccatatgtgtatccaactcatcaatccccagatctttcttaatagtttctctta 3079735  T
Q  111 tagttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||| ||||||||||||  ||||||||||||||| ||||  || ||||||||    
T  3079736 tagttatctaggtcttcctttacctctagtgatttcactccccttcatctgat 3079788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 8932962 - 8932826
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||| |||||||| |||||| |||| ||||||||| ||||||||||||| | ||  || |||||||| | || || ||| ||  | || |    
T  8932962 cactaagtggggtcagctacatggatcaaatgacgccatagtgttttatcaaaagccatattttgatccaactcattaacctttaaatcttttctaatgg 8932863  T
Q  102 tttctctaatagttttc-taggtcttccactacctct 137  Q
    |||||| ||| |||||| |||||||||| ||||||||    
T  8932862 tttctcgaatggttttcttaggtcttcctctacctct 8932826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 15215436 - 15215519
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctcta 86  Q
    |||||||||||||||||||||| |||| | |||||||||||||| ||| |||| |||| | |   |||||||||||||||||||    
T  15215436 actaagtggggtcggctacatggatcatatgacgtcatagtgttctattaaaaaccatatttggatcaaactcattgatctcta 15215519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29520909 - 29520747
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| |||||| ||||||||| ||||||  ||| |||| |||| ||||| || |||| | |   || |||||||| ||||||| ||| ||| | | |    
T  29520909 ccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaatctctaaatcgttcctaaca 29520810  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||| ||||| |||||||| ||||||||||| | |||||||||||    
T  29520809 gtttctcttatagtttttctagg-cttcctctacctcttgtgatttgactatcctccatctgat 29520747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40813584 - 40813421
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||| ||||| |  |||  | |   || |||||| ||| ||||| ||||||  | ||     
T  40813584 ccactaagtggggttggctacatggatcaaatgatgtcatagtgttctatcacacaccaaatttggatccaactcactgacctctaaatcctttctaatg 40813485  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||||||||| |||||||||| ||||||||  | | |||||||| |||||| ||||    
T  40813484 gtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgat 40813421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 2216477 - 2216388
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||||||||||| ||| ||||| ||||||||||| ||  |||| ||||||||||| |||||||||||||| ||||| | ||||||||    
T  2216477 aactcattgatctctaaatc-ttcttaatagtttctcttatgttttttctaggtcttcctctacctctagtgatctgactatcctccatct 2216388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14742104 - 14742158
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||    
T  14742104 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaa 14742158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 23023481 - 23023351
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    ||||||||||||| |||||| |||||||||||||||| | || ||||| |   |||||   | || |||||||| |||| |||||| |||||  ||||||    
T  23023481 taagtggggtcggttacatggatcaaacgacgtcataatattctatcatatatcatgttcctatccaactcattaatctgtagatctttcttagtagttt 23023382  T
Q  105 ctctaatagtttt-ctaggtcttccactacc 134  Q
    |||| |||||||| ||||||||||| |||||    
T  23023381 ctcttatagtttttctaggtcttcctctacc 23023351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 2796813 - 2796676
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||| ||||||||||||||  ||| |||| |||| |||||||| |||  | |   |  |||| ||||| ||||| ||||||  | ||     
T  2796813 ccactaagtggggtcgtctacatgaatcaaattacgccatactgttctatcaaaaaccaaatttgagttcaactaattgacctctaaatcctttctaatg 2796714  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  2796713 gtttctctaatagttttcttaggtcttcctctacctct 2796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18473994 - 18474047
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaa 54  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||| |||||||    
T  18473994 ccactaagtggtgtcggctacatgaatcaaacgaagtcataatgttctatcaaa 18474047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 35643698 - 35643791
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||||||||||| ||||| ||| ||||||| |||| ||||||||||||||| || |||||||| || ||||| | ||||| |||||    
T  35643698 aactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctctagtaatctgactatcctccagctgat 35643791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 42469753 - 42469886
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    ||||||||||| |||||||| |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | || ||||    
T  42469753 taagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 42469852  T
Q  105 ctctaatagttttc-taggtcttccactacctct 137  Q
    ||| ||| |||||| |||||||||| ||||||||    
T  42469853 ctcgaatggttttcttaggtcttcctctacctct 42469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 30783072 - 30783224
Alignment:
Q  9 tggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    |||||||||||||||| ||||||| || ||||| |||| ||| | || || | | |   || |||||||| ||||||||||| ||||  |||||||||||    
T  30783072 tggggtcggctacatggatcaaactacctcataatgttttattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttctct 30783171  T
Q  109 aatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
     || ||||| |||| |||||| || ||||||||||| ||||| | ||||||||    
T  30783172 tatggttttactagatcttcctctgcctctagtgatctgactatcctccatct 30783224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16917442 - 16917280
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||| |||||||||| |||||| |  |||| | |||| ||||| |  |||| | | | || |||||||| ||||||| ||| | |||||||    
T  16917442 ccactaagtggggacggctacatggatcaaaagcagtcaaa-tgttctatcatataccatatttctatccaactcattaatctctaaatcttccttgata 16917344  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||| |  |||| ||||||||||||||  |||||| ||||||||||||| | ||| |||||||    
T  16917343 gtttcacctatagcttttctaggtcttcttctacctgtagtgatttgactatcctcaatctgat 16917280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32569732 - 32569783
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||| |||||    
T  32569732 ccactaaatggggtcggctacataaatcaaatgacgtcatagtgttctatca 32569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32931220 - 32931058
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  | | |||| |||| ||||| |  |||| | ||  || |||||||| || || | ||| ||| | |||    
T  32931220 ccactaagtggggtcggctacatggatcaaattatgccataatgttctatcatacaccatat-ttcgtccaactcattaatttcaaaatctttcctaata 32931122  T
Q  101 gtttctctaatagttttct-aggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| | ||||||||| || ||||||||||| ||||| | |||||||||||    
T  32931121 gtttctctgatagtttttttaggtcttcctctgcctctagtgatatgactatcctccatctgat 32931058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 34196640 - 34196565
Alignment:
Q  21 catgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttctt 96  Q
    ||||||||||||||||  |||||||| |||||||   |||||||||||  || ||||| |||||||||||||||||    
T  34196640 catgaatcaaacgacgctatagtgttctatcaaacatcatgtctttctttaaatcattaatctctagatccttctt 34196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 25985664 - 25985615
Alignment:
Q  114 ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||| |||||||||||||||||||||  || ||||||||    
T  25985664 ttttctaggtcttcctctacctctagtgatttgactcccctacatctgat 25985615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 4011282 - 4011198
Alignment:
Q  62 tctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgattt 145  Q
    ||||| || |||||||| |||| |||||| ||||| ||||||||||| |||| ||||||||||||||| ||  |||||| |||||    
T  4011282 tctttatccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctctagcgattt 4011198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 16715466 - 16715370
Alignment:
Q  68 tcaaactcattgatctctagatccttcttgatagtttctctaat-agttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||| |||| |||||| ||||||||||||| |||||||| || |  |||||||| ||||| || || ||||||||||||||  || |||||||||    
T  16715466 tcaaacccattaatctcttgatccttcttgatggtttctcttataaactttctaggccttcctctgccactagtgatttgactactccccatctgat 16715370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 45512614 - 45512666
Alignment:
Q  98 atagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    ||||||||||| |||||||| ||||||||||| || |||||||||||||||||    
T  45512614 atagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgact 45512666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25473425 - 25473476
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||| |||||    
T  25473425 ccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatca 25473476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30689995 - 30689944
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||| |||||    
T  30689995 ccactaagtggggtcggctacatggatcaaattacgtcataatgttatatca 30689944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 37826459 - 37826388
Alignment:
Q  93 tcttgatagtttctctaatagttt-tctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||| ||||||||||| ||||||| ||||||||| || || |||||||||||||||||  ||| ||||||||    
T  37826459 tcttaatagtttctcttatagtttatctaggtctccctctgcctctagtgatttgactactcttcatctgat 37826388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44529485 - 44529434
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| || | ||||||||| |||||    
T  44529485 ccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatca 44529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1335586 - 1335556
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  1335586 ccactaagtggggtcggctacatgaatcaaa 1335556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 29700422 - 29700376
Alignment:
Q  114 ttttctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    ||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  29700422 ttttctaggtcttcctctacctctagtgatatgactatcctccatct 29700376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 36042450 - 36042404
Alignment:
Q  9 tggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    ||||||| |||||||| |||||| |||||||||||||| ||||||||    
T  36042450 tggggtccgctacatggatcaaatgacgtcatagtgttctatcaaaa 36042404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 45419398 - 45419332
Alignment:
Q  98 atagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| |||||||| ||||||||||| ||||||||   ||| ||||||| |||||||||||    
T  45419398 atagtttctcttatagtttttctaggtcttcctctacctcttcagatctgactctcctccatctgat 45419332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16035749 - 16035794
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    ||||||||||||||| |||||||||||||||  |||||||| ||||    
T  16035749 ccactaagtggggtcagctacatgaatcaaattacgtcataatgtt 16035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 30559883 - 30559790
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||||||| ||| ||| ||||||||||||| |||| |||| || ||||||  ||| ||||||||||  |||| | |||||||||||    
T  30559883 aactcattaatctctaaatctttcctgatagtttctcttatagtttttttaagtcttcatctatctctagtgatccgactatcctccatctgat 30559790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 35914624 - 35914785
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||| |||||||| ||||||  ||| |||| |||| ||||| || |||| | ||  || |||||||| ||||  |  || ||| | ||||    
T  35914624 cactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcattaatcttcaagtctttcctaatag 35914723  T
Q  102 tttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctga 162  Q
    ||||||| |||| ||||||| ||||||| ||  |||||| ||| ||||| | ||||||||||    
T  35914724 tttctcttatagtttttctatgtcttcctctgtctctagggatctgactatcctccatctga 35914785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 38409158 - 38409207
Alignment:
Q  114 ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||| || ||||||| |||| ||||||||| |||||||||||    
T  38409158 ttttctaggtctacccctacctccagtggtttgactctcctccatctgat 38409207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12026040 - 12025978
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaa---cgacgtcatagtgttgtatcaaaagccat 60  Q
    ||||||||| ||||||| |||||| ||||||   ||||||||||||||| |||||||| ||||    
T  12026040 ccactaagtagggtcggttacatggatcaaatgacgacgtcatagtgttctatcaaaaaccat 12025978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14742860 - 14742900
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  14742860 ccactaagtggggttggctacatggatcaaactacgtcata 14742900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 28528614 - 28528452
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  28528614 cactaagtggggtcggctacatgaatcaaacgacgccatagtggtctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatag 28528515  T
Q  102 tttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||| | |||| |||| |||||||||| |||| ||||| ||||||||||  |||||| ||||    
T  28528514 tttctgttatagtttttttaggtcttcccctacttctagggatttgactcccctccatttgat 28528452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 51585002 - 51584855
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagt 102  Q
    ||||||||||||| |||||||||||||||| | ||||||||||| |||||||| | ||||||||||| | |||||| || || |||||| |||| |||||    
T  51585002 actaagtggggtctgctacatgaatcaaacaatgtcatagtgttctatcaaaaacaatgtctttctccagctcattaatgtccagatccctcttaatagt 51584903  T
Q  103 ttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  51584902 ttctcttatagtttttctaggtcttcccctacctctagtgatttgact 51584855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7083150 - 7083011
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||| ||||| || | ||||||||||| |||||||| |||||||| ||| |||| |||    
T  7083150 ccactaagcggggtcagctacatgaatcaaacgacgccatagtgttctatcataaccgatgtctttctccaactcattaatctctagttccatcttaata 7083051  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctag 139  Q
    |||||||| |||| ||||||||||||||| ||||||||||    
T  7083050 gtttctcttatagcttttctaggtcttcccctacctctag 7083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 10272516 - 10272355
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||||||  |   ||||| |||||||| ||| || ||||||  ||| ||| || |||||||||||||| |||    
T  10272516 ccactaagtggggtcggctacatgaatcaaacgacaccg--gtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaata 10272419  T
Q  101 gtttctctaata-gttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||   ||||||||||    
T  10272418 gtttctcttataagttttctaggtcttcccctacctctagtgatttgactcccatccatctgat 10272355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 27637690 - 27637799
Alignment:
Q  38 catagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctc 136  Q
    |||||| || |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||| |||||||||| |||||||    
T  27637690 catagtattctatcaaaaaccatgtctttctccaactcattgatcactagatccttcttgatagtttctctaaaagtttttttaggtcttcccctacctc 27637789  T
Q  137 tagtgatttg 146  Q
    ||||||||||    
T  27637790 tagtgatttg 27637799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 52442554 - 52442713
Alignment:
Q  4 ctaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtt 103  Q
    ||||||||||||||||||| |||||||||| | ||||| |||| || ||||| | |||||||| || |||||||| |  |||||||||||||||||||||    
T  52442554 ctaagtggggtcggctacaagaatcaaacggcatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtt 52442652  T
Q  104 tctctaatagtt-ttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||| ||| || ||||||||||||| |||||||||| ||||||||||   ||||||||||    
T  52442653 tctcttatatttgttctaggtcttcctctacctctagagatttgactcccttccatctgat 52442713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 40419893 - 40419737
Alignment:
Q  6 aagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttc 105  Q
    |||||||||||||||||||||| |||||||| ||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||| | ||||||||    
T  40419893 aagtggggtcggctacatgaat-aaacgacgccatagtgatctatcaaaaaccatgtctttctccaactcatttatctctagatccttcataatagtttc 40419795  T
Q  106 tctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctga 162  Q
    |   |||| ||||||| |||| || ||||||||||| || | ||||  ||||||||||    
T  40419794 ttgtatagattttctatgtctacccctacctctagttatctaactcccctccatctga 40419737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 50771578 - 50771741
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaag-ccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| || |||| |||||||| ||||| | ||| ||||| ||| ||||  ||||||||||||| |||| ||| |||||||| |||||||| |||    
T  50771578 cactaagtggagttggctgcatgaatcgaacgatgccatggtgttctattaaaaaaccatgtctttctccaacttattaatctctaggtccttcttaata 50771677  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||| || |||| ||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  50771678 gtttcgcttatagtttttctaggtcttcccctacctctagtcatttgactcccctccatctgat 50771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 12261741 - 12261894
Alignment:
Q  7 agtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttct 106  Q
    |||||||||  |||||||||||||||||| ||| || ||| |||||||| ||||||||||||| |||| ||| ||| |||  | ||||||  ||||||||    
T  12261741 agtggggtcatctacatgaatcaaacgacatcacagcgttctatcaaaaaccatgtctttctccaactaattaatccctaatttcttcttactagtttct 12261840  T
Q  107 ctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatc 159  Q
    || |||| ||||||||||||| | | |||||||||||||||||||| |||||||    
T  12261841 cttatagtttttctaggtcttaccccacctctagtgatttgactctcctccatc 12261894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 37263532 - 37263428
Alignment:
Q  59 atgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagt-tttctaggtcttccactacctctagtgatttgactcttctcca 157  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |  |||||    
T  37263532 atgtgtttctccaactcattgatctctagatc-ttcttgatagtttcactaatagtatttctaggtcttcccctacctctagtgatttgacacccctcca 37263434  T
Q  158 tctgat 163  Q
    ||||||    
T  37263433 tctgat 37263428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 50806927 - 50806766
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||||||||| |||||||||||||| ||| ||||||||| ||||| || |||| | ||| || ||| |||| ||||||  |||||||||||||    
T  50806927 ccactaaatggggtcggttacatgaatcaaacaacgccatagtgttttatcataaaccatatttttatccaacgcattaatctct--atccttcttgata 50806830  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || | ||||||||||||||  |||| ||||||||||||||||  |||||| ||||    
T  50806829 gtttctcttattgtttttctaggtcttcatctacttctagtgatttgactcccctccatttgat 50806766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26016697 - 26016534
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| || |||||||| ||||||||||| || | |||| || ||||| |||||| |||||| |||||||| ||||||||||| ||| | |||    
T  26016697 ccactaagtgggctcagctacatgtatcaaacgacgccacaatgttctaccaaaaaccatgtttttctctaactcatttatctctagatcattcctaata 26016598  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||| |||||||||||| |   ||||||||||||| ||||||  || ||||||||    
T  26016597 gtttctcttatagtttttctaggtctactcttacctctagtgatctgactccccttcatctgat 26016534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13578924 - 13579030
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||| ||||||| ||  ||| | |||    
T  13578924 ccactaagtggagtcggctatatgaatcaaacgacgtcatagtgttctatcaaaattcatg-ctttctcaaactcatttatctctaaatatttcataata 13579022  T
Q  101 gtttctct 108  Q
    ||||||||    
T  13579023 gtttctct 13579030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 6641367 - 6641222
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    ||||||| ||||  |||||||||||||||||| ||||||||| |||| |||  |||| |||||||||||||||| ||||||| ||  ||| ||| |||||    
T  6641367 taagtggcgtcgcttacatgaatcaaacgacgccatagtgttttatcgaaaatcatgcctttctcaaactcatttatctctatattattcctgacagttt 6641268  T
Q  105 ctctaatagttt-tctaggtcttccactacctctagtgatttgact 149  Q
     ||| ||||||| ||||||||| ||   ||||||||||||||||||    
T  6641267 ttcttatagtttgtctaggtctacccacacctctagtgatttgact 6641222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25979253 - 25979390
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  25979253 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 25979352  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    |||||||||||||||||| | |||||||| ||||||||    
T  25979353 gtttctctaatagttttcatgggtcttcctctacctct 25979390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30445365 - 30445255
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||| |||||||| |||      | || |||||||| |||||||||||| ||||||||    
T  30445365 ccactaagtggagttggctacatgaatcaaacgacgtcatggtgttctatcaaaaacca------tatccaactcattaatctctagatccctcttgata 30445272  T
Q  101 gtttctctaatagtttt 117  Q
    |||||||| || |||||    
T  30445271 gtttctcttatcgtttt 30445255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 38869142 - 38868993
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||| ||||| |  |||| | | | || ||| |||| ||| ||||||| ||||| |||    
T  38869142 ccactaagtggggtcggctacatggatcaaacgacgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaata 38869043  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
     ||||||| |||| ||||||||||||||  || |||||| ||||||||||    
T  38869042 atttctcttatagtttttctaggtcttcttctgcctctaatgatttgact 38868993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 1211005 - 1210842
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  1211005 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 1210906  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  1210905 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 1210842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29808116 - 29807989
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||  |||||||||||||||||| | || ||||||||| |||||||| |||| | ||| |  ||||| || || | |||||||||||||||     
T  29808116 ccactaagtggaatcggctacatgaatcaaatgtcgccatagtgttttatcaaaaaccatatttttattcaactcgttaatatttagatccttcttgatc 29808017  T
Q  101 gtttctctaatag-ttttctaggtcttc 127  Q
    |||||||| |||| ||||||||||||||    
T  29808016 gtttctcttatagtttttctaggtcttc 29807989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 49347415 - 49347578
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  49347415 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 49347514  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  49347515 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 49347578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30202152 - 30202289
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  30202152 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 30202251  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  30202252 gtttctctaatagttttcctaggtcttcctctacctct 30202289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 52921340 - 52921203
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||| ||||| || |||| | |   || || ||||||| ||||| ||||||  | ||     
T  52921340 ccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcattgacctctaaatcctttctaatg 52921241  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  52921240 gtttctctaatagttttcctaggtcttcctctacctct 52921203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 32404548 - 32404708
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| |||  |||| ||||| || |||||| |   |  |||||||| ||||||| ||| ||| | |||    
T  32404548 ccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaaatctttcctaata 32404647  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||| |||| |||| |||||||||| |||||||| ||||| ||||| | ||||||||    
T  32404648 gtttctcttatagtttttgtaggtcttcctctacctcttgtgatatgactatcctccatct 32404708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 43898444 - 43898326
Alignment:
Q  49 atcaaaagccatgtctttctcaaactcattgatctctagatccttctt---gatagtttctctaatag-ttttctaggtcttccactacctctagtgatt 144  Q
    ||||||| |||||| |||||| |||||||| |||||||||||||||||    ||||||||||| |||| ||||| ||||||| | |||||| | ||||||    
T  43898444 atcaaaaaccatgtttttctccaactcattaatctctagatccttcttctaaatagtttctcttatagtttttccaggtctttccctacctttggtgatt 43898345  T
Q  145 tgactcttctccatctgat 163  Q
    ||||||  |||||||||||    
T  43898344 tgactcccctccatctgat 43898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22090356 - 22090193
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  22090356 ccacttagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 22090257  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||| ||  | | |||||||| |||||| ||||    
T  22090256 gtttctctaatagttttcctaggtcttcctctaccccttttaacttgactctcctccatttgat 22090193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 34792375 - 34792534
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||  | |   || |||||||||| || || ||||||  | || ||||    
T  34792375 taagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattgacctttaaatcctttctaatggttt 34792474  T
Q  105 ctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  34792475 ctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 34792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 44008769 - 44008690
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaata-gttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||||||||||||||| |||| |||||||||||| | |  ||||||||||||||| || |||||||||||||||||    
T  44008769 aactcattgatctctagatctttctcgatagtttctcttagattttttctaggtcttcctctgcctctagtgatttgact 44008690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 4001477 - 4001614
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||| ||| |||||||| |||| | |   || |||||||||| ||||| ||| || || ||     
T  4001477 ccactaagtggggttggctacatggatcaaatgatgtcatagggttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttttaatg 4001576  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||| ||| |||||| |||||||||| ||||||||    
T  4001577 gtttctcgaatggttttcttaggtcttcctctacctct 4001614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 6025865 - 6025716
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||  ||||||||||| |||||| |||| |||  |||| ||||| |  |||| | | | || |||||||| ||||||||||| || ||  ||    
T  6025865 ccactaagtggaatcggctacatggatcaaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctagatcttttttacta 6025766  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgact 149  Q
    || ||||| |||||||| ||||||||||| || |||||||||||||||||    
T  6025765 gtatctcttatagtttttctaggtcttcctctgcctctagtgatttgact 6025716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37311777 - 37311914
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  37311777 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatg 37311876  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||| ||| ||||| |||||||| || ||||||||    
T  37311877 gtttctcaaatggttttcctaggtctacctctacctct 37311914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 38807693 - 38807854
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| | ||||  ||| ||||||||| ||||| || |||| | |   || ||||| |||| ||||| ||||||  | ||     
T  38807693 ccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaactcgttgacctctaaatcctttctaatg 38807792  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctg 161  Q
    |||||||| ||||||||| |||||||||| ||| ||||  |||| ||||||| |||||||||    
T  38807793 gtttctcttatagttttcttaggtcttcccctagctcttttgatctgactctcctccatctg 38807854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 853877 - 853956
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||| | ||||||||||||||||| ||||||||||  |||| |||| |||||||||| || |||||||||||||||||    
T  853877 aactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgcctctagtgatttgact 853956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4029382 - 4029219
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| | || ||||||||| ||||| |  |||  | |   || |||||||||| || || ||||||  | ||     
T  4029382 ccactaagtggggtcggctacatggatcaaatgtcgccatagtgttatatcatacaccaaatttggatccaactcattgacctttaaatcctttctaatg 4029283  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  4029282 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 4029219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28533727 - 28533676
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  28533727 ccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatca 28533676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 696530 - 696392
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtc-atagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgat 99  Q
    |||||||||||||||||||||||  |||||| |||| | |||||||| |||||||| |||| | |   ||||||||||||| ||||| ||| ||  | ||    
T  696530 ccactaagtggggtcggctacattgatcaaatgacgccaatagtgttctatcaaaaaccatatttggatcaaactcattgacctctaaatcttttctaat 696431  T
Q  100 agtttctctaatagttttc-taggtcttccactacctct 137  Q
     ||||||| ||| |||||| |||||||||| ||||||||    
T  696430 ggtttctcgaatggttttcttaggtcttcctctacctct 696392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15086182 - 15086128
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||    
T  15086182 ccactaagtggggttggctacatggatcaaatgacgtcatagtgttctatcaaaa 15086128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37263618 - 37263532
Alignment:
Q  1 ccactaagtggggtcggctacatgaatc-aaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctcta 86  Q
    |||||||||||||  |||||| |||||  |||||||| ||||||||| ||||||||  ||||| |||||| ||||||||||||||||    
T  37263618 ccactaagtggggctggctacgtgaatttaaacgacgccatagtgttctatcaaaaatcatgtgtttctccaactcattgatctcta 37263532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28511823 - 28511972
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||  ||||||  ||| |||| |||| ||||| || |||||| ||  || |||||||| ||||| |  || ||| |  ||    
T  28511823 ccactaagtggggtcggctacattgatcaaattacgccataatgttctatcataaaccatgttttggtccaactcattaatctccaagtctttcctagta 28511922  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
     |||||||||||| ||||||||||||| | || ||||||||||| |||||    
T  28511923 atttctctaatagtttttctaggtctttctctgcctctagtgatctgact 28511972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 39318379 - 39318226
Alignment:
Q  11 gggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaa 110  Q
    |||||||||||||| ||||||  ||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | || |||||||| |    
T  39318379 gggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctta 39318280  T
Q  111 tagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||| ||||||||||| ||||||||  |||   |||||| |||||||||||    
T  39318279 tagttttcctaggtcttcctctacctcttttgacccgactctcctccatctgat 39318226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48861397 - 48861450
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaa 54  Q
    |||||||||||||||||| |||||||||||||||||||||| || | |||||||    
T  48861397 ccactaagtggggtcggcgacatgaatcaaacgacgtcataatgctctatcaaa 48861450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 8342973 - 8343049
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttg 146  Q
    |||||||| ||||||||||| || || || |||||||| |||||||| ||||||||||| ||| |||||||||||||    
T  8342973 aactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctatctctagtgatttg 8343049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 51440787 - 51440923
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||| ||||||||||||| |||| | ||||||| ||||| |  |||  | |   || |||||||||| || || ||||||  | ||     
T  51440787 ccactaagtggggtcggttacatgaatcaaatgacgccgtagtgttctatcatacaccaaatttggatccaactcattgacctataaatcctttctaatg 51440886  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctc 136  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  51440887 gtttctctaatagttttcctaggtcttcctctacctc 51440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2544853 - 2544696
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  | | |||| |||| ||| | || |||| | |  ||| ||||||||||| || | ||| |     |||    
T  2544853 ccactaagtggggtcggctacatggatcaaattatgccataatgttctattataaaccatatttcgctccaactcattgatttccaaatctt-----ata 2544759  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||||| | |||||||||||    
T  2544758 gtttctctgatagtttttctaggtcttcctctacctctagtg-tttgactatcctccatctgat 2544696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5114003 - 5113952
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||| || |||||||||||||||||||| |||||||||||||| |||||    
T  5114003 ccactaattgaggtcggctacatgaatcaaatgacgtcatagtgttctatca 5113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 8796469 - 8796310
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| || |||  ||| |||| |||| ||||| || |||| | |   || || ||||| || |||||||| ||||| |||    
T  8796469 ccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaatatctagatctttcttaata 8796370  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatc 159  Q
    |||||||| | || |||| | |||||||| || ||||||||||| ||||| | |||||||    
T  8796369 gtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactatcctccatc 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9599416 - 9599579
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||  |||| |||||||| ||||||  ||| ||||  ||| ||||| || |||| |||   ||||||||||| | ||||| ||  ||| | |||    
T  9599416 ccactaagtaaggtcagctacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaata 9599515  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||  ||||||| ||||||||||| ||||||||  |||| ||||||| |||||||||||    
T  9599516 gtttctcttgtagtttttctaggtcttcctctacctcttatgatctgactctcctccatctgat 9599579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 15577608 - 15577529
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctc-taatagttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| ||||||| ||||||||| |||||||||| || || |||| ||| |||||| |||||||||||||| |||||    
T  15577608 aactcattaatctctatatccttcttaatagtttctcttattatttttttagatcttcctctacctctagtgatgtgact 15577529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 19969271 - 19969370
Alignment:
Q  38 catagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctc 136  Q
    ||||||||| | |||||  |||||  |||||| |||||||| ||||||||||| || || ||||||||||| |||| ||||||||||||||  |||||||    
T  19969271 catagtgttctgtcaaagaccatgaatttctccaactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttctcctacctc 19969370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29577512 - 29577461
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  29577512 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 29577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 30834069 - 30834148
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| ||||||||||| ||| | ||||||||||| |||| ||||||||||||||| || ||||||  |||||||||    
T  30834069 aactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgact 30834148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 36339826 - 36339968
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| ||| |||||||| ||||||  || ||||| |||| |||||  | |||||| | | || |||||||| || || | ||| ||| | |||    
T  36339826 ccactaagtggagtcagctacatggatcaaattacttcataatgttttatcattaaccatgtttctgtccaactcattaatttcaa-atctttcctaata 36339924  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgat 143  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||    
T  36339925 gtttctctgatagtttttctaggtcttcctctacctctagtgat 36339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43240401 - 43240452
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||| |||||    
T  43240401 ccactaagtgaggtcggctacatgaatcaaatgacgccatagtgttctatca 43240452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 49377480 - 49377421
Alignment:
Q  105 ctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||  ||||||||||||    
T  49377480 ctctaatagtttttctaggtcttcctctgcctctagtgatttgactactctccatctgat 49377421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 52532638 - 52532745
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||||||||||  ||| |||| |||| ||||| || |||| | ||  || |||||||| || |||| ||| ||| | |||    
T  52532638 ccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaaatctttcctaata 52532737  T
Q  101 gtttctct 108  Q
    ||||||||    
T  52532738 gtttctct 52532745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15437150 - 15437204
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||| ||||||| ||||||||||||||||||||  ||||||||| ||||||||    
T  15437150 ccactatgtggggttggctacatgaatcaaacgacaccatagtgttctatcaaaa 15437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 3662567 - 3662518
Alignment:
Q  59 atgtctttctcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    |||||||| ||||||||||| ||| |||||||||||| ||||||||||||    
T  3662567 atgtctttatcaaactcattaatcactagatccttctcgatagtttctct 3662518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 8672108 - 8672015
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||| ||||| ||||||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  8672108 aactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 8672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 17640108 - 17640197
Alignment:
Q  20 acatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctcta 109  Q
    ||||||||||||||||| |||| |||| ||| | |||| || | ||| || |||||||| ||||||||||||||| | ||||||| ||||    
T  17640108 acatgaatcaaacgacgccataatgttctattacaagcaatatttttatccaactcattaatctctagatccttccttatagtttttcta 17640197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 32231046 - 32231139
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||| ||||| ||||||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  32231046 aactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 32231139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14224344 - 14224277
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctc 69  Q
    ||||||||| ||||||||| ||||||| ||| |||| ||||||| | |||||||| |||||||||||||    
T  14224344 ccactaagtagggtcggctgcatgaat-aaatgacgccatagtggtctatcaaaaaccatgtctttctc 14224277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 41560489 - 41560353
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| |||| |||| ||||| || |||| | |   || |||||||| ||||||| ||   || | |||    
T  41560489 ccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcattaatctctaaatgtatcctaata 41560390  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctc 136  Q
    |||||||| |||| ||||||||||||||  |||||||    
T  41560389 gtttctcttatagcttttctaggtcttcttctacctc 41560353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 3777284 - 3777327
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||    
T  3777284 actaagtgggatcggctacatggatcaaatgacgtcatagtgtt 3777327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 3818878 - 3819025
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||  |||||||||||| |||||| | || |||| ||||  |||| || |||| | | | |  |||||||| ||||||| ||| ||||| |||    
T  3818878 ccactaagtgcagtcggctacatggatcaaatggcgacataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaata 3818977  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttga 147  Q
    |||||||| |||| ||||| ||||||||| ||  |||||||| |||||    
T  3818978 gtttctcttatagtttttcaaggtcttcctctttctctagtggtttga 3819025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 15242244 - 15242150
Alignment:
Q  22 atgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    ||||||||||||||  |||||| || ||| |||| |||||| ||||||    ||||| |||||| ||||||| ||||||||| |||||||||||||    
T  15242244 atgaatcaaacgaccccatagtattatataaaaaaccatgtttttctctgcttcatt-atctcttgatcctttttgatagttcctctaatagtttt 15242150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 29577236 - 29577307
Alignment:
Q  73 ctcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgat 143  Q
    |||||| ||||||||||| ||||| ||||||| | |  ||||||| ||||||||||| ||||||||||||||    
T  29577236 ctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttcctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 149
Target Start/End: Complemental strand, 43423865 - 43423830
Alignment:
Q  114 ttttctaggtcttccactacctctagtgatttgact 149  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43423865 ttttctaggtcttcctctacctctagtgatttgact 43423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44751744 - 44751693
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||| ||||||||||||| |||||| |||| ||||||||| |||||    
T  44751744 ccactaagtgaggtcggctacatggatcaaatgacgccatagtgttctatca 44751693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44941798 - 44941849
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| |||||    
T  44941798 ccactaagtggggtcggctacatggatcaaattacgccatagtgttctatca 44941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 7922027 - 7921953
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagttttctaggtcttccactacctctagtgattt 145  Q
    |||||||| ||||||||||| || ||  |||||||| | ||||||||  ||||||||  ||||||||||||||||    
T  7922027 aactcattaatctctagatcgtttttactagtttcttttatagttttgaaggtcttcatctacctctagtgattt 7921953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 39140775 - 39140745
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  39140775 ccactaagtggggtcggctacatgaatcaaa 39140745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 8203226 - 8203283
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttc 127  Q
    |||||||| ||||||||||| || || ||||||||||| |||| ||||||||||||||    
T  8203226 aactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttc 8203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43028830 - 43028875
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgtt 46  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||    
T  43028830 ccactaagtggggtcgcttacatgaatcaaacgacaccatagtgtt 43028875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8392030 - 8391978
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||| ||||||||| |||||| |||| |||||| || ||||||||    
T  8392030 actaagtggggttggctacatggatcaaatgacgccatagtattctatcaaaa 8391978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 9468494 - 9468454
Alignment:
Q  60 tgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||| ||||||||||||| ||| |||||||||    
T  9468494 tgtctttctcaaaatcattgatctctatatctttcttgata 9468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32082778 - 32082838
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgac-gtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| ||| | | ||||||| |||||||| ||||    
T  32082778 ccactaagtggggtcggctacatggatcaaatgactgccgtagtgttctatcaaaaaccat 32082838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41165542 - 41165502
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcata 41  Q
    |||||||||||||||||||||||| |||||| |||| ||||    
T  41165542 ccactaagtggggtcggctacatggatcaaatgacgccata 41165502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 10617256 - 10617420
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||| ||||||||| |||||||| ||| || |||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||     
T  10617256 ccactaagtggggccggctacataaatcaaacaacgccaaagtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatg 10617355  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgata 164  Q
    |||||||| |||| |||||||||| |||  |||||||||||||||||||||  |||||| |||||    
T  10617356 gtttctcttatagtttttctaggttttcttctacctctagtgatttgactcccctccatttgata 10617420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 7513427 - 7513575
Alignment:
Q  17 gctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagttt 116  Q
    |||||||||||||||| ||| ||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||| | | ||||||||| |||||||    
T  7513427 gctacatgaatcaaacaacgccatagtgttctatcaaaaaccatgtctttctccaactcattcatctctagatccttcctaaaagtttctcttatagttt 7513526  T
Q  117 -tctaggtctt-ccactacctctagtgatttgactcttctccatctgat 163  Q
     || ||||||| || || ||||||||||||||||||  ||| |||||||    
T  7513527 atccaggtcttccccctgcctctagtgatttgactcccctcaatctgat 7513575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 7080584 - 7080437
Alignment:
Q  17 gctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-tt 115  Q
    |||||||||||||||  ||||||||| ||  ||||||||  ||||| ||||||  | ||||| |||| |||||| ||||||||||||||||| |||| ||    
T  7080584 gctacatgaatcaaattacgtcatagagtcctatcaaaaatcatgtatttctccgattcattaatctttagatctttcttgatagtttctcttatagttt 7080485  T
Q  116 ttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    || ||||| |||| |||| ||||  |||||||||| ||||||||||||    
T  7080484 ttataggttttcctctacttctaaagatttgactcatctccatctgat 7080437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 39031 - 38907
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaag--------ccatgtctttctcaaactcattgatctctagatcct 92  Q
    ||||| |||||  ||||||||||||||||||| ||| ||||||||| ||||||||         ||||||||||||| |||||||| |||||||||||||    
T  39031 ccacttagtggactcggctacatgaatcaaacaacgccatagtgttctatcaaaaagtcaaaaaccatgtctttctccaactcatttatctctagatcct 38932  T
Q  93 tcttgatagtttctctaatagtttt 117  Q
    || | ||||||||||| ||||||||    
T  38931 tcctaatagtttctcttatagtttt 38907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 14315039 - 14315161
Alignment:
Q  18 ctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    ||||||| ||||||||||| |||| | ||  |||||||  |||||||||||| || ||||| |||| |||||||||| | ||||||| | ||||| ||||    
T  14315039 ctacatgtatcaaacgacgacataatattcaatcaaaaaacatgtctttctctaaatcatttatctttagatccttcgtaatagtttatttaatattttt 14315138  T
Q  118 ctaggtcttccactacctctagt 140  Q
    |||||||| || |||||||||||    
T  14315139 ctaggtctacccctacctctagt 14315161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34527 - 34670
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||| ||||||  ||| |||| |||| ||||| || |||| | |   || |||||||| |||| |||||| ||||| ||     
T  34527 ccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaatctttagatctttcttaatg 34626  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    |||||||| |||| ||||||||||||||| || |||||||||||    
T  34627 gtttctcttatagtttttctaggtcttcctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28085636 - 28085473
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||  ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  28085636 ccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 28085537  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  28085536 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctactccatttgat 28085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 30031516 - 30031379
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||| ||||||||||||| ||||||  ||| ||||||||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  30031516 ccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgacctctaaatcctttctaatt 30031417  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| |||||||| || ||||||||    
T  30031416 gtttctctaatagttttcctaggtctccctctacctct 30031379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8364816 - 8364653
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||| ||||||||||||||| ||||||  ||| |||| |||| ||||| || |||||| |   || |||| ||| || |||| ||| ||||| |||    
T  8364816 ccactaagcggggtcggctacatggatcaaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaata 8364717  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||| |||| |||||||||  || ||||||||||| ||||  | |||||||||||    
T  8364716 gtttctcttatagtttttttaggtcttcatcttcctctagtgatctgacaatcctccatctgat 8364653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12890835 - 12890672
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||  ||| ||||||||| ||||| || |||| | |   || ||||||||||  |||| ||||||  | ||     
T  12890835 ccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcattgacgtctaaatcctttctaatg 12890736  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||| ||||||||||  ||||||||  |||  | ||||| |||||||||||    
T  12890735 gtttctcttatagttttcctaggtcttcatctacctcttttgaccttactctcctccatctgat 12890672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 608421 - 608303
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||| |||||||||||||| |||||| ||||||||||| || |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  608421 ccactaagtagggtcggctacatggatcaaatgacgtcatagtattctatcaaaaaccatatttggatccaactcattgaactctaaatcttttctaatg 608322  T
Q  101 gtttctctaatagttttct 119  Q
    ||||||| |||||||||||    
T  608321 gtttctcgaatagttttct 608303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 34143791 - 34143925
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||| ||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | || ||||    
T  34143791 taagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttgtaatggttt 34143890  T
Q  105 ctctaatagtttt-ctaggtcttccactacctcta 138  Q
    ||||||||||||| ||||||||||| |||||||||    
T  34143891 ctctaatagttttcctaggtcttcctctacctcta 34143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 34156407 - 34156541
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||| ||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | || ||||    
T  34156407 taagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttgtaatggttt 34156506  T
Q  105 ctctaatagtttt-ctaggtcttccactacctcta 138  Q
    ||||||||||||| ||||||||||| |||||||||    
T  34156507 ctctaatagttttcctaggtcttcctctacctcta 34156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 27755819 - 27755883
Alignment:
Q  52 aaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    |||| ||||||||||||| || ||||||||||||| |||||||| |||| ||||||||||||||||    
T  27755819 aaaatccatgtctttctccaaatcattgatctctatatccttctagata-tttctctaatagtttt 27755883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 33084188 - 33084135
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||| |||||||||||||||||||||||||| |||||| || ||||||||    
T  33084188 cactaagtagggtcggctacatgaatcaaacgacgccatagtattctatcaaaa 33084135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30789096 - 30789156
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatg 61  Q
    ||||||||| || ||||||||||| |||||| |||||||||||||| |||||||| |||||    
T  30789096 ccactaagtaggatcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccatg 30789156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3206481 - 3206540
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||| |||| ||||    
T  3206481 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctattaaaaaccat 3206540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9707030 - 9706971
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    |||||||||||||||||||||||| |||||| || | ||||||||| |||||||| ||||    
T  9707030 ccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccat 9706971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31819091 - 31819040
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  31819091 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 31819040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32756181 - 32756018
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| ||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||| ||  | ||     
T  32756181 ccactaagtgggatcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttctaatg 32756082  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||| | ||||||||  | | |||||||| |||||| ||||    
T  32756081 gtttctctaatagttttcctaggtctttctctacctcttttaacttgactctcctccatttgat 32756018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 9593800 - 9593891
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||||||  || ||| | ||||||||||| ||| |||| ||||||||||| ||||||||  |||||||||||| |||||||||||    
T  9593800 aactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctct--tgatttgactctcctccatctgat 9593891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4245894 - 4245947
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaa 54  Q
    ||||||||||||||||||||| || ||||||||| |||||| |||| |||||||    
T  4245894 ccactaagtggggtcggctacttggatcaaacgatgtcataatgttctatcaaa 4245947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 1747724 - 1747812
Alignment:
Q  62 tctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    ||||| || |||||||| |||||||||||||||||   ||||||||| || | ||||||||||||||| || |||||||  ||||||||    
T  1747724 tctttatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctctagaaatttgact 1747812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 31818788 - 31818648
Alignment:
Q  4 ctaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtt 103  Q
    ||||||||||||||||||||| ||||||  ||| |||| |||| ||||| || ||||   ||  || |||||||| ||||| | | | ||| | ||||||    
T  31818788 ctaagtggggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagtt 31818689  T
Q  104 tctctaatag-ttttctaggtcttccactacctctagtgat 143  Q
    ||||| |||| ||||||||||||||  |||||| |||||||    
T  31818688 tctcttatagtttttctaggtcttctcctacctttagtgat 31818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1615245 - 1615296
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||| || ||||||||||||| |||||| |||||||||||||| |||||    
T  1615245 ccactaaatgaggtcggctacatggatcaaatgacgtcatagtgttctatca 1615296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5258170 - 5258229
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccat 60  Q
    ||||||||||||||||||||| || |||||| |||| |||||||||  ||||||| ||||    
T  5258170 ccactaagtggggtcggctacgtggatcaaatgacgccatagtgtttaatcaaaaaccat 5258229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 10453312 - 10453269
Alignment:
Q  12 ggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||    
T  10453312 ggtcggctacatgaatcaaaagacgccatagtgttctatcaaaa 10453269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34934852 - 34934903
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| || | ||||||||| |||||    
T  34934852 ccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatca 34934903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 35043467 - 35043590
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||| || |||||||  |||||| |||||||||||||| |||||||| |||| | |   || ||| |||||| ||||| ||||||  | || ||||    
T  35043467 taagtgggatcagctacattgatcaaatgacgtcatagtgttctatcaaaaaccatatttggatccaacacattgacctctaaatcctttctaatggttt 35043566  T
Q  105 ctctaatagttttc-taggtcttc 127  Q
    ||||||| |||||| |||||||||    
T  35043567 ctctaatggttttcttaggtcttc 35043590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 1681613 - 1681671
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaat-agttttctaggtcttcc 128  Q
    |||||||| ||||||||||||||||| ||||||||||| || | |||| ||||||||||    
T  1681613 aactcattaatctctagatccttcttaatagtttctcttataacttttttaggtcttcc 1681671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21886364 - 21886314
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatc 51  Q
    ||||||| |||||||||||||||| |||||| |||||||| ||||| ||||    
T  21886364 ccactaaatggggtcggctacatggatcaaatgacgtcattgtgttctatc 21886314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 32949726 - 32949768
Alignment:
Q  12 ggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaa 54  Q
    |||||| ||||||||||||||||||||||| |||| |||||||    
T  32949726 ggtcggttacatgaatcaaacgacgtcataatgttctatcaaa 32949768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 3963945 - 3963896
Alignment:
Q  114 ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||| |||||||| ||||||||||||  |||| ||||||    
T  3963945 ttttctaggtcttcctctacctctggtgatttgactcccctccttctgat 3963896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 4948405 - 4948489
Alignment:
Q  80 atctctagatccttcttgatagtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| ||||  ||||||| |||  |||||||  |||||||||| |||||||||||| ||||||| |  ||||||||||    
T  4948405 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgat 4948489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 4955376 - 4955460
Alignment:
Q  80 atctctagatccttcttgatagtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||| ||||  ||||||| |||  |||||||  |||||||||| |||||||||||| ||||||| |  ||||||||||    
T  4955376 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgat 4955460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 21870158 - 21870247
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt---ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||| ||||||||||||||    ||||||||||  ||||||||   ||||||||||| || ||| |||||||||||||  |||||||||    
T  21870158 aactcattaatctctagatcctta---atagtttctcagatagtttttttctaggtcttcctctgcctttagtgatttgactactctccatct 21870247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 1525893 - 1525741
Alignment:
Q  12 ggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaat 111  Q
    ||||||||||||||||||||| ||| ||||| ||| |||||||| ||||||||||||| |||||||| |||||| |||||||| | |||||||||||  |    
T  1525893 ggtcggctacatgaatcaaacaacgccatagcgttctatcaaaaaccatgtctttctccaactcatttatctctggatccttcctaatagtttctcttgt 1525794  T
Q  112 ag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    || |||||||||||| || |||||||||||||| ||||||| |||||||||||    
T  1525793 agtttttctaggtctacccctacctctagtgatctgactctcctccatctgat 1525741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2713196 - 2713041
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||| ||||        |||||||||| |||||||| ||||||||||||||||| |||    
T  2713196 ccactaagtgggctcggctacatgaatcaaacgatgccatagtgttctatc--------tgtctttctccaactcattcatctctagatccttcttaata 2713105  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| |||| ||||||||||||||| ||  |||||||||||||||||| |||||||||||    
T  2713104 gtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgat 2713041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 33667691 - 33667547
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||| ||||||| ||||||||| ||| || |||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||| |||  ||    
T  33667691 taagtggggttggctacacgaatcaaacaacgccaaagtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaataactt 33667592  T
Q  105 ctctaatag-ttttctaggtcttccactacctctagtgatttgac 148  Q
    |||| |||| ||||||||||||||| |||| ||||||||||||||    
T  33667591 ctcttatagtttttctaggtcttcccctacatctagtgatttgac 33667547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 31635979 - 31636092
Alignment:
Q  38 catagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctc 136  Q
    ||||||||| || ||||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||| |||    
T  31635979 catagtgttctaccaaaaaccatgtgtttctccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctc 31636078  T
Q  137 tagtgatttgactc 150  Q
    ||||||||||||||    
T  31636079 tagtgatttgactc 31636092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 10082777 - 10082917
Alignment:
Q  11 gggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaa 110  Q
    ||||| ||||||||||||| |||||||||||||||  || ||||| ||||||||||||| |||||||| |||||||||||||| ||  |||||||||| |    
T  10082777 gggtcagctacatgaatcagacgacgtcatagtgtgttaacaaaaaccatgtctttctccaactcattaatctctagatccttgttactagtttctctta 10082876  T
Q  111 tag-ttttctaggtcttccactacctctagtgatttgactc 150  Q
    ||| ||||||||||||| | ||| |||| ||||||||||||    
T  10082877 tagtttttctaggtcttaccctatctctggtgatttgactc 10082917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3442893 - 3442982
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatc 90  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| || ||||| |||||||||||    
T  3442893 ccactaagtggggtcggctacatgaatcaaacgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaatctctagatc 3442982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37065737 - 37065632
Alignment:
Q  1 ccactaag-tggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgat 99  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||| | ||    
T  37065737 ccactaagctggggtcggctacatgaatcaaacgacttcatagtgctctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaat 37065638  T
Q  100 agtttc 105  Q
    ||||||    
T  37065637 agtttc 37065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 14749542 - 14749404
Alignment:
Q  26 atcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtc 124  Q
    |||||| |||| ||||||||| |||||||| |||| | | | || ||||| || ||||||||||||||||||||||||||||| |||| |||||||||||    
T  14749542 atcaaatgacgccatagtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtc 14749443  T
Q  125 ttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||| || ||| ||||||||||||||  |||||||||||    
T  14749442 ttcctctgcctttagtgatttgactcccctccatctgat 14749404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 21952573 - 21952454
Alignment:
Q  43 tgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtg 141  Q
    |||| |||||||| ||||||||||||| ||| |||| ||||||||||||||||  ||||||||||  |||||||| ||||||||||| ||||||||||||    
T  21952573 tgttctatcaaaaaccatgtctttctccaacccattaatctctagatccttctcaatagtttctc--atagtttttctaggtcttcccctacctctagtg 21952476  T
Q  142 atttgactcttctccatctgat 163  Q
    |||||||||  |||||||||||    
T  21952475 atttgactcccctccatctgat 21952454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11002443 - 11002606
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||| |||||| ||||||||||||||| | | ||||||||| |||||||| | ||| ||||||| |||||||| ||||||||||| ||  | |||    
T  11002443 ccactaagtagggtcgactacatgaatcaaacaatgccatagtgttctatcaaaaactatgcctttctccaactcatttatctctagatcgttactaata 11002542  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||| ||| |||| |||||||||||| || | |||||||||||| ||||||  || ||||||||    
T  11002543 gtttgtcttatagtttttctaggtctaccccaacctctagtgatctgactcccctacatctgat 11002606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28411936 - 28411843
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttc 94  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||  ||||| |||||| || ||||| |||||||||||||||    
T  28411936 ccactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccaagtcatttatctctagatccttc 28411843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28976881 - 28977044
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  28976881 ccactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttataatg 28976980  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  28976981 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 28977044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 1174738 - 1174641
Alignment:
Q  12 ggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctcta 109  Q
    |||| ||| ||| ||| |||| ||| |||||||||  ||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  1174738 ggtcagctgcatcaattaaacaacgccatagtgttacatcaaaaaccatgtctttctcaaactcattaatctctagatccttcttaatagattctcta 1174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38685227 - 38685090
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| |||| |||| ||||| || |||| | |   || |||||||||| ||||| ||||||  | ||     
T  38685227 ccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatg 38685128  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  38685127 gtttctctaatagttttcctaggtcttcctctacctct 38685090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1935363 - 1935275
Alignment:
Q  20 acatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctct 108  Q
    ||||||||||||||||  ||||||||| | |||||| || |||||||||| |||||||| ||||||||||||||| | |||||||||||    
T  1935363 acatgaatcaaacgacaccatagtgttctgtcaaaaaccttgtctttctccaactcatttatctctagatccttcctaatagtttctct 1935275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 12492406 - 12492569
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  12492406 ccactaagtggggtcggctacatgcatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 12492505  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  12492506 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 12492569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38578540 - 38578706
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtcttt-ctcaaactc--attgatctctagatccttcttg 97  Q
    ||||||||||||| | ||||||| ||||||| |||||||| ||||| ||| ||||   |||| ||| ||| |||||  ||| || |||||||||||| |     
T  38578540 ccactaagtggggccagctacataaatcaaaggacgtcatggtgttctataaaaactaatgttttttctccaactctcatttatttctagatccttcata 38578639  T
Q  98 atagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||  ||||||| |||||||| || |||| ||||||||||||||||| ||| |||||||    
T  38578640 atagtttctcttgtagtttttctaggtctacccctacatctagtgatttgactctcctcgatctgat 38578706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 18698984 - 18698886
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgatatata 168  Q
    |||||| | ||||||||||| |||||||||  |||||| |||||||| |||||| |||| || |||||||||||||||||  |||||||||||||||||    
T  18698984 aactcactaatctctagatctttcttgatacattctcttatagtttttctaggtattcctctgcctctagtgatttgactactctccatctgatatata 18698886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3302104 - 3301967
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| | ||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  3302104 ccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttataatg 3302005  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||||||| |||||| |||||||||| ||||||||    
T  3302004 gtttctctaatggttttcttaggtcttcctctacctct 3301967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2915518 - 2915680
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| || |||  | |   || |||||||||| ||||| ||||||  | ||     
T  2915518 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataa-ccaaatttggatccaactcattgacctctaaatcctttctaatg 2915616  T
Q  101 gtttctctaatagtt-ttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||| | ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  2915617 gtttctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatttgat 2915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4496644 - 4496481
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| || | ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  4496644 ccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 4496545  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  4496544 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 4496481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 21916123 - 21916024
Alignment:
Q  18 ctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagtttctctaatagtttt 117  Q
    ||||||||||||||||| ||||||| ||| ||||||||   |||| |||||| |||||||| ||||||||||||||| | || |||||||| || |||||    
T  21916123 ctacatgaatcaaacgatgtcatagagttctatcaaaaataatgtatttctccaactcatttatctctagatccttcctaattgtttctcttatcgtttt 21916024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27998701 - 27998567
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||||| |||||| |||||||||||||||| | || ||||| |   |||||   | || |||||||| |||| |||||| |||||  ||    
T  27998701 ccactaagtggggtcggttacatggatcaaacgacgtcataatattctatcatatatcatgttcctatctaactcattaatctgtagatctttcttagta 27998602  T
Q  101 gtttctctaatag-ttttctaggtcttccactacc 134  Q
    |||||||| |||| ||||||||||||||| |||||    
T  27998601 gtttctcttatagtttttctaggtcttcctctacc 27998567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 9917542 - 9917635
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||||||| ||| ||||  |||||||||||||||| ||||||||||| ||| ||  |||| ||||||||||| | |||||||||||    
T  9917542 aactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactatcctccatctgat 9917635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10639562 - 10639425
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  10639562 ccacaaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 10639463  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  10639462 gtttctctaatagttttcctaggtcttcctctacctct 10639425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 13561408 - 13561545
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||   |   || |||||||||| ||||| ||| ||  | ||     
T  13561408 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcattgacctctaaatcttttctaatg 13561507  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||| ||| |||||| |||||||||| ||||||||    
T  13561508 gtttctcgaatggttttcttaggtcttcctctacctct 13561545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 7678737 - 7678578
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| ||||||| || ||||| |||| ||| | || || | | |   || |||||||| ||||||||||| ||||  |||    
T  7678737 ccactaagtggggtcggctacatggatcaaactacctcataatgtt-tattataaaccgtatttcgatccaactcattaatctctagatctttctaaata 7678639  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    |||||||| || ||||| |||| |||||| || ||||||||||| ||||| | ||||||||    
T  7678638 gtttctcttatggttttactagatcttcctctgcctctagtgatctgactatcctccatct 7678578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29816642 - 29816514
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  29816642 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 29816543  T
Q  101 gtttctctaatagtttt-ctaggtcttcc 128  Q
    ||||||||||||||||| |||||||||||    
T  29816542 gtttctctaatagttttcctaggtcttcc 29816514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1287601 - 1287764
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||  |||| ||||||||  ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  1287601 ccactaagtggggtcggctacatggatcaactgacgccatagtgtactatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 1287700  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  1287701 gtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 1287764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 36123274 - 36123353
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| |||||||||||||||||||| ||||| || |||| ||||||| |||||||  |||||||||||||| ||||    
T  36123274 aactcattaatctctagatccttcttgatggtttcccttatagcttttctaagtcttcctttacctctagtgattcgact 36123353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 38684740 - 38684574
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||  ||||||||||||||  ||| |||| |||| ||||||   |||| | | | || |||| ||| ||||||||||| ||||| | |    
T  38684740 ccactaagtggggtcaactacatgaatcaaataacgccataatgttctatcaagtaccatatttctatccaactaattaatctctagatctttcttaaaa 38684641  T
Q  101 gtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgatata 166  Q
    ||||||||  ||| |||||||||||||||  ||| |||||||||| || ||  |||||||| |||||    
T  38684640 gtttctcttgtagtttttctaggtcttcctttacatctagtgattggaatcccctccatctaatata 38684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1275524 - 1275471
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaa 54  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| |||||||    
T  1275524 ccactaagtggggtcggctacatggatcaaatgacgtcataatgttctatcaaa 1275471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 16133995 - 16134095
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    |||||||||||||| | |||||||||||||| |||| ||| |||| ||  |||| ||||||||||||| || ||||| |||| |||||||||| | ||||    
T  16133995 cactaagtggggtcaggtacatgaatcaaacaacgtaatattgttctaataaaa-ccatgtctttctccaaatcatttatctttagatccttcataatag 16134093  T
Q  102 tt 103  Q
    ||    
T  16134094 tt 16134095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2075495 - 2075659
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttct-tgat 99  Q
    |||||||||||||| |||||||||||||||| |||| |||||| || ||||| |  |||  | |   || |||||||||| ||||| |||||| | | ||    
T  2075495 ccactaagtggggttggctacatgaatcaaatgacgccatagtattctatcatacaccaaatttggatccaactcattgacctctaaatccttttctaat 2075594  T
Q  100 agtttctctaatagtt-ttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
     ||||||||||||||| | ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  2075595 ggtttctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatttgat 2075659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 34273272 - 34273136
Alignment:
Q  2 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatag 101  Q
    ||||||||| ||| ||||||||| ||| || |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | || |    
T  34273272 cactaagtgaggttggctacatggatcgaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatgg 34273173  T
Q  102 tttctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  34273172 tttctctaatagttttcctaggtcttcctctacctct 34273136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30213835 - 30213784
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  30213835 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 30213784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1935453 - 1935399
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||||| ||||||||||| ||| || |||||| ||||||||    
T  1935453 ccactaagtggggtcggctatatgaatcaaacaacgccagagtgttctatcaaaa 1935399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9121100 - 9121154
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||| | ||||||    
T  9121100 ccactaagtgaggtcggctacatgaatcaaacgatgccatagtgttctgtcaaaa 9121154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 12576952 - 12577045
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| ||||||||||| ||||| ||||||| |||  ||||||| ||||||||||| || |||||||||||  ||||   |||||||||||    
T  12576952 aactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctctagtgataggactaccctccatctgat 12577045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 24178700 - 24178607
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||| ||||| ||||||  | || ||||||||||||||||| ||||||||||| ||||||||  | | |||||||| |||||| ||||    
T  24178700 aactcattgaactctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgat 24178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 42199476 - 42199383
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || |||||||| ||||  ||||||| |||||||| ||||||||||||| | || || ||||||||||||||  ||||||| ||||    
T  42199476 aactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgat 42199383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 42199583 - 42199490
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||| || |||||||| ||||  ||||||| |||||||| ||||||||||||| | || || ||||||||||||||  ||||||| ||||    
T  42199583 aactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgat 42199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 17213329 - 17213218
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    ||||||||||| |||  ||||||||| | |||||| | | || ||||||||   ||||||||||| |||||||| |||||||||||||| || |||||||    
T  17213329 taagtggggtcagctctatgaatcaatc-acgtcaaaatattctatcaaaaattatgtctttctctaactcattaatctctagatccttgttaatagttt 17213231  T
Q  105 ctctaatagtttt 117  Q
     |||  |||||||    
T  17213230 ttcttctagtttt 17213218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 6859544 - 6859481
Alignment:
Q  98 atagtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatct 160  Q
    ||||||||||| |||||||| ||||||||||| || ||||||||| ||||||| | ||||||||    
T  6859544 atagtttctcttatagtttttctaggtcttcctcttcctctagtggtttgactatcctccatct 6859481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15252766 - 15252817
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    ||||||||||||||||||||||||||| |||| || ||||| |||| |||||    
T  15252766 ccactaagtggggtcggctacatgaattaaactacatcataatgttctatca 15252817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20457033 - 20456982
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| |||| |||| |||||    
T  20457033 ccactaagtggggtcggctacatggatcaaatgacgccataatgttctatca 20456982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 408516 - 408558
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagt 43  Q
    |||||||||||||||||||||||| |||||| |||| ||||||    
T  408516 ccactaagtggggtcggctacatggatcaaatgacgccatagt 408558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 14911428 - 14911378
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaa 55  Q
    |||||||||||||||||||| |||||| |||| |||||| || ||||||||    
T  14911428 taagtggggtcggctacatggatcaaatgacgccatagtattctatcaaaa 14911378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 16347402 - 16347537
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||| |||||||||||||| |||||| |||| |  |||||| ||||| || |||| | | | || || ||||||| ||||| ||| ||  | ||     
T  16347402 ccactaagtagggtcggctacatggatcaaatgacgcc--agtgttctatcataaaccatatttgtatccaaatcattgacctctaaatcttttctaatg 16347499  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||||| |||||||||| ||||||||||| ||||||||    
T  16347500 gtttctttaatagttttcctaggtcttcctctacctct 16347537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 15369884 - 15369968
Alignment:
Q  66 tctcaaactcattgatctctagatccttcttgatagtttctctaata-gttttctaggtcttccactacctctagtgatttgactc 150  Q
    |||| |||||||| |||| |||||  ||||| ||||||||||| |||  |||||||||||| ||| ||||||||||||| ||||||    
T  15369884 tctccaactcatttatctttagatttttcttaatagtttctcttatactttttctaggtctacca-tacctctagtgatatgactc 15369968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 20456963 - 20456870
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||| ||||| ||||| ||||||  | || |||||||||||||||||| |||||||||| ||||||||  | | |||||||| |||||| ||||    
T  20456963 aacttattgacctctaaatcctttctaatggtttctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgat 20456870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 9235235 - 9235166
Alignment:
Q  73 ctcattgatctctagatccttcttgatagtttctctaatagtttt-ctaggtcttccactacctctagtgat 143  Q
    |||||| ||||||| ||| ||||| |||||||||||  ||||||| ||||||||||| || |||||||||||    
T  9235235 ctcattaatctctatatctttcttaatagtttctct--tagtttttctaggtcttcctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 163216 - 163322
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||| |||| || || |||| | |||    
T  163216 ccactaaatggagtcggctatatgaatcaaacgacgtcatagtgttctatcaaaatcaatg-ctttctcaaactcatttatctttaaatacttcataata 163314  T
Q  101 gtttctct 108  Q
    ||||||||    
T  163315 gtttctct 163322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 970 - 1133
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||| ||||||| |||||||| |||||| |||| ||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||| || || ||     
T  970 ccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttttaatg 1069  T
Q  101 gtttctctaatagttttc-taggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    |||||||||||||||||| |||||||||| ||||||||  | ||||||||||||||||| ||||    
T  1070 gtttctctaatagttttcctaggtcttcctctacctcttttaatttgactcttctccatttgat 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 82974 - 82842
Alignment:
Q  5 taagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgatagttt 104  Q
    |||||||||||||||||||| |||||| |||||||||||||| ||||| ||  ||| | |   || |||||||||| ||||| ||||||  | || ||||    
T  82974 taagtggggtcggctacatggatcaaatgacgtcatagtgttctatcataaatcatatttggatccaactcattgacctctaaatcctttctaatggttt 82875  T
Q  105 ctctaatagtttt-ctaggtcttccactacctct 137  Q
    |||| |||||||| ||||||||||| ||||||||    
T  82874 ctct-atagttttcctaggtcttcctctacctct 82842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 16838 - 16701
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||| |||||||||||  |||||| |||| ||||||||| |||||||| |||| | |   || |||||||||| ||||| ||| ||  | ||     
T  16838 ccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatg 16739  T
Q  101 gtttctctaatagttttc-taggtcttccactacctct 137  Q
    ||||||| ||| |||||| |||||||||| ||||||||    
T  16738 gtttctcgaatggttttcttaggtcttcctctacctct 16701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25554 - 25682
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    ||||||||||||||| |||||||| || ||| |||||||||||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  25554 ccactaagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 25653  T
Q  101 gtttctctaatagtttt-ctaggtcttcc 128  Q
    ||||||||||||||||| |||||||||||    
T  25654 gtttctctaatagttttcctaggtcttcc 25682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 591 - 540
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  591 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28911 - 28962
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatca 52  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  28911 ccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 28962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31728 - 31565
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccttcttgata 100  Q
    |||||||||||||||||||||||| |||||| ||| ||| |||||| ||||| |  |||  | |   || |||||||||| ||||| ||||||  | ||     
T  31728 ccactaagtggggtcggctacatggatcaaatgacttcacagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatg 31629  T
Q  101 gtttctctaatagtttt-ctaggtcttccactacctctagtgatttgactcttctccatctgat 163  Q
    ||||||||||||||||| || |||||||| |||| |||  | | |||||||| |||||| ||||    
T  31628 gtttctctaatagttttcctgggtcttcctctacatcttttaacttgactctcctccatttgat 31565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 178512 - 178591
Alignment:
Q  71 aactcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgatttgact 149  Q
    |||||||| ||||||| ||| ||||| ||||||||||| |||| ||||||||||||| | |  ||||||||||| |||||    
T  178512 aactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtcttactccgcctctagtgatatgact 178591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 11986 - 11912
Alignment:
Q  72 actcattgatctctagatccttcttgatagtttctctaatag-ttttctaggtcttccactacctctagtgattt 145  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| |||||||| |||||   | |||||||||||||    
T  11986 actcattaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctctagtgattt 11912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 11573 - 11613
Alignment:
Q  3 actaagtggggtcggctacatgaatcaaacgacgtcatagt 43  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  11573 actaagtggggtcggctacatggatcaaatgacgtcatagt 11613  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 12019 - 12086
Alignment:
Q  19 tacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctcta 86  Q
    ||||| ||||||| ||||  ||| |||||||||||||  ||||| |||||| ||||||||||||||||    
T  12019 tacataaatcaaatgacgctatattgttgtatcaaaaaacatgtttttctccaactcattgatctcta 12086  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 58248 - 58331
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctc 84  Q
    ||||||||| |||||||||||||| ||||||  ||| |||| |||| ||||| || |||| ||||  || ||||||||||||||    
T  58248 ccactaagttgggtcggctacatggatcaaattacgacataatgttctatcataaaccatatcttggtccaactcattgatctc 58331  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 99308 - 99386
Alignment:
Q  1 ccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtat-caaaagccatgtctttctcaaactcatt 78  Q
    |||||| |||| ||||||||||||| |||||||||  ||||| ||| ||| ||||| |||||||| |||| ||||||||    
T  99308 ccactatgtggtgtcggctacatgattcaaacgacaccatagcgttctatacaaaaaccatgtctgtctccaactcatt 99386  T

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