View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12415_high_7 (Length: 245)
Name: NF12415_high_7
Description: NF12415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12415_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 37832784 - 37833011
Alignment:
| Q |
18 |
ataaagccactctcaaaaactcaaattctgctaacaacaatcttaaagcatacttataaaaataaacaagcaaaaatcttatgctaggactagggtgaat |
117 |
Q |
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| T |
37832784 |
ataaagccactctcaaaaactcaaattctgctaacaacaatcttaaagcatacttataaaaataaacaagcaaaaatcttatgctaggactagggtgaat |
37832883 |
T |
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| Q |
118 |
tattaagcataagaactagctcaatgtcttaaacgaaactaacaacaaaataaatctctagagtaaatttcagtagtttgtcccatttgtcatcgtccct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37832884 |
tattaagcataagaactagctcaatgtcttaaacgaaactaacaacaaaataaatctctagagtaaatttcagtagtttgtcccatttgtcatcgtccct |
37832983 |
T |
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| Q |
218 |
catgagcaaacaactgcttttacttctt |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
37832984 |
catgagcaaacaactgcttttacttctt |
37833011 |
T |
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