View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12418_low_1 (Length: 855)

Name: NF12418_low_1
Description: NF12418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12418_low_1
NF12418_low_1
[»] chr6 (15 HSPs)
chr6 (377-834)||(26853961-26854418)
chr6 (19-173)||(26854625-26854779)
chr6 (701-848)||(26890735-26890882)
chr6 (691-847)||(27713804-27713960)
chr6 (744-832)||(26631760-26631848)
chr6 (744-832)||(26737735-26737823)
chr6 (744-834)||(27651952-27652041)
chr6 (755-847)||(26966390-26966482)
chr6 (760-848)||(31289542-31289630)
chr6 (744-830)||(27422308-27422394)
chr6 (556-627)||(24062813-24062884)
chr6 (556-626)||(33573668-33573738)
chr6 (555-631)||(13698490-13698566)
chr6 (556-624)||(28592866-28592934)
chr6 (556-627)||(9894219-9894290)
[»] scaffold0349 (1 HSPs)
scaffold0349 (691-847)||(17984-18140)
[»] chr8 (13 HSPs)
chr8 (691-850)||(29269670-29269829)
chr8 (556-626)||(5918840-5918910)
chr8 (555-626)||(15898968-15899039)
chr8 (556-626)||(15044083-15044152)
chr8 (566-631)||(11352970-11353035)
chr8 (556-629)||(35451035-35451108)
chr8 (574-626)||(23085650-23085702)
chr8 (556-624)||(38804458-38804526)
chr8 (556-623)||(18994542-18994609)
chr8 (562-627)||(9280383-9280449)
chr8 (538-628)||(27275432-27275522)
chr8 (542-619)||(288964-289041)
chr8 (557-626)||(19367853-19367922)
[»] chr7 (19 HSPs)
chr7 (79-173)||(9962668-9962762)
chr7 (556-626)||(27513150-27513220)
chr7 (556-627)||(10040607-10040678)
chr7 (408-469)||(15845099-15845160)
chr7 (556-628)||(15646928-15647000)
chr7 (556-626)||(5800451-5800521)
chr7 (556-626)||(20149272-20149342)
chr7 (542-626)||(35213746-35213830)
chr7 (556-627)||(2474852-2474923)
chr7 (408-467)||(9962255-9962314)
chr7 (408-471)||(15453881-15453944)
chr7 (432-471)||(15519628-15519667)
chr7 (556-627)||(19492076-19492147)
chr7 (555-626)||(21080021-21080092)
chr7 (567-626)||(39465675-39465734)
chr7 (408-470)||(15864439-15864501)
chr7 (556-633)||(8036360-8036437)
chr7 (556-629)||(10199447-10199520)
chr7 (556-629)||(23160799-23160872)
[»] chr1 (11 HSPs)
chr1 (556-628)||(37705630-37705702)
chr1 (556-626)||(47402437-47402507)
chr1 (560-633)||(9398168-9398240)
chr1 (557-626)||(34749026-34749094)
chr1 (556-612)||(5965559-5965615)
chr1 (559-626)||(650120-650187)
chr1 (555-626)||(1580999-1581070)
chr1 (556-623)||(34011016-34011083)
chr1 (557-627)||(44645080-44645150)
chr1 (557-627)||(44648438-44648508)
chr1 (556-629)||(10729219-10729292)
[»] scaffold0003 (1 HSPs)
scaffold0003 (744-830)||(64969-65055)
[»] chr2 (16 HSPs)
chr2 (556-626)||(21885130-21885200)
chr2 (556-626)||(34753406-34753476)
chr2 (538-626)||(25915017-25915105)
chr2 (556-626)||(13450355-13450425)
chr2 (556-626)||(9191964-9192034)
chr2 (570-628)||(33133800-33133858)
chr2 (556-628)||(1397275-1397347)
chr2 (555-631)||(13594052-13594128)
chr2 (556-628)||(33134329-33134401)
chr2 (556-628)||(36817310-36817382)
chr2 (559-626)||(18746251-18746318)
chr2 (569-628)||(35125740-35125799)
chr2 (556-626)||(8875261-8875331)
chr2 (556-626)||(9169952-9170022)
chr2 (556-626)||(19134063-19134133)
chr2 (542-587)||(7886174-7886219)
[»] chr4 (10 HSPs)
chr4 (556-620)||(20702726-20702790)
chr4 (556-628)||(17702363-17702435)
chr4 (556-627)||(1363929-1364000)
chr4 (556-627)||(35519274-35519345)
chr4 (556-626)||(5190634-5190704)
chr4 (556-626)||(2290849-2290919)
chr4 (556-626)||(7438047-7438117)
chr4 (556-626)||(37013096-37013165)
chr4 (557-627)||(38720804-38720874)
chr4 (555-620)||(37831137-37831202)
[»] scaffold0707 (1 HSPs)
scaffold0707 (556-626)||(169-239)
[»] scaffold0068 (1 HSPs)
scaffold0068 (556-626)||(57415-57485)
[»] chr5 (4 HSPs)
chr5 (555-624)||(1611812-1611881)
chr5 (556-624)||(8990556-8990624)
chr5 (556-627)||(43370381-43370452)
chr5 (556-621)||(24836953-24837018)
[»] scaffold0014 (1 HSPs)
scaffold0014 (555-627)||(21086-21158)
[»] chr3 (11 HSPs)
chr3 (556-627)||(18461102-18461173)
chr3 (556-627)||(22258405-22258476)
chr3 (556-626)||(5811917-5811987)
chr3 (556-626)||(22102620-22102690)
chr3 (558-628)||(49758211-49758281)
chr3 (556-625)||(21091777-21091846)
chr3 (542-628)||(7777752-7777839)
chr3 (556-627)||(18386715-18386785)
chr3 (555-626)||(18388580-18388651)
chr3 (561-627)||(5530819-5530885)
chr3 (556-626)||(21824221-21824291)
[»] scaffold0092 (1 HSPs)
scaffold0092 (555-626)||(24100-24171)
[»] scaffold0268 (1 HSPs)
scaffold0268 (556-629)||(21411-21484)


Alignment Details
Target: chr6 (Bit Score: 402; Significance: 0; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 377 - 834
Target Start/End: Complemental strand, 26854418 - 26853961
Alignment:
Q  377 atttgggagtacggtaagtgtaaaggttaatgatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattaggcgcactggt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26854418 atttgggagtacggtaagtgtaaaggttaatgatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattaggcgcaatggt 26854319  T
Q  477 agcaaccaaatcataattttaggcgcaattgtaagtgtaaaggttttgccgttaggaagagtcataaaaaatacaatctataattttcatacgttagcgc 576  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26854318 agcaaccaaatcctaattttaggcgcaattgtaagtgtaaaggttttgccgttaggaagagtcataaaaaatacaatttataattttcatacgttagcgc 26854219  T
Q  577 aataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaataattaatcactttatttgagaaatggaatatcacgtcattgaacag 676  Q
    ||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26854218 aataaaaagagcagaatgacgggcaagtgggtgcccgtcttttcgctagttaataattaatcactttatttgagaaatggaatatcacgtcattgaacag 26854119  T
Q  677 agattgtggctaaacttgtatttctaaaagcaaattaatcatacatatatgtgtttctgttcctacgcaagttctgtctcagaaaactgatttggcagaa 776  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  26854118 agattgtggctaaacttgtatttctaaaaggaaattaatcatacatatatgtgtttctgctcctacgcaagttctgtctcagaaaactgacttggcagaa 26854019  T
Q  777 aagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgttgctg 834  Q
    || |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  26854018 aattgtttttacacaagaataacttattaatcacaagagccatacagtgttgttgctg 26853961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 26854779 - 26854625
Alignment:
Q  19 ttaattgtttacactagatggaaaacaacgacaatgattttagggatttttgttccacttattatggttctacggatgtgaatttgaatgatgataaaac 118  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26854779 ttaattgtttacactagatggaaaacaatgacaatgattttacggatttttgttccacttattatggttctacggatgtgaatttgaatgatgataaaac 26854680  T
Q  119 ctatccgaattttgttgggagtcaaggtaaaggtaatgagaatgttgaacataat 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26854679 ctatccgaattttgttgggagtcaaggtaaaggtaatgagaatgttgaacataat 26854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 701 - 848
Target Start/End: Complemental strand, 26890882 - 26890735
Alignment:
Q  701 taaaagcaaattaatcatacatatatgtgtttctgttcctacgcaagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataact 800  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26890882 taaaagcaaattaatcatacatacatgtgttgctgctgctacataagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataact 26890783  T
Q  801 tattaatcacaagagccattcggtgttgttgctgtgacacaggttctg 848  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26890782 tattaatcacaagagccattcggtgttgttgctgtgacacaagttctg 26890735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 691 - 847
Target Start/End: Original strand, 27713804 - 27713960
Alignment:
Q  691 cttgtatttctaaaagcaaattaatcatacatatatgtgtttctgttcctacgcaagttctgtctcagaaaactgatttggcagaaaagtgtttttacaa 790  Q
    ||||||||  ||||||||||||||||||||||| || ||||  || | |||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  27713804 cttgtattattaaaagcaaattaatcatacatacatatgttgttgctgctacacaagttctgtctcagaaaactgatttggcagagaagtgtttttacac 27713903  T
Q  791 aagaataacttattaatcacaagagccattcggtgttgttgctgtgacacaggttct 847  Q
    |||||||||||| |||||||||||| ||| | ||||||||||||  ||||| |||||    
T  27713904 aagaataacttaataatcacaagagacatacagtgttgttgctgctacacaagttct 27713960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 26631848 - 26631760
Alignment:
Q  744 caagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgttgc 832  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |  |||||||||    
T  26631848 caagttctgtctcagaaaacagatttgggagaaaagtgtttttacacaagaataccttattaatcacaagagccatacaatgttgttgc 26631760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 744 - 832
Target Start/End: Complemental strand, 26737823 - 26737735
Alignment:
Q  744 caagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgttgc 832  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |  |||||||||    
T  26737823 caagttctgtctcagaaaacagatttgggagaaaagtgtttttacacaagaataccttattaatcacaagagccatacaatgttgttgc 26737735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 744 - 834
Target Start/End: Original strand, 27651952 - 27652041
Alignment:
Q  744 caagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgttgctg 834  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||  || | ||||||||||||    
T  27651952 caagttctgtctca-aaaactgatttggcagaaaagtgtttttacacatgaataacttattaatcacaaaagttatacagtgttgttgctg 27652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 755 - 847
Target Start/End: Complemental strand, 26966482 - 26966390
Alignment:
Q  755 tcagaaaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgttgctgtgacacaggttct 847  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||| | || |||||||||  ||||| |||||    
T  26966482 tcagaaaactgatttggcagcaaagtgtttttacacaagaataccttattaatctcaagagccatacagttttgttgctgctacacaagttct 26966390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 760 - 848
Target Start/End: Complemental strand, 31289630 - 31289542
Alignment:
Q  760 aaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgttgctgtgacacaggttctg 848  Q
    |||||||  ||||||| ||||||||||||| ||||||| ||||||||||||||||||||| | |||||||| |||  ||||||||||||    
T  31289630 aaactgaactggcagagaagtgtttttacacaagaataccttattaatcacaagagccatacagtgttgtttctgctacacaggttctg 31289542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 744 - 830
Target Start/End: Original strand, 27422308 - 27422394
Alignment:
Q  744 caagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgtt 830  Q
    ||||||||||  ||||||| ||||||||||||||| || ||||||| ||||||| ||||||||| ||||||||||| | ||||||||    
T  27422308 caagttctgttgcagaaaaatgatttggcagaaaactgcttttacacaagaataccttattaattacaagagccatacagtgttgtt 27422394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 627
Target Start/End: Original strand, 24062813 - 24062884
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| |||| ||||||||||||||||  |||  ||||| | |||||||||||||||||||||||||    
T  24062813 ataattttcaaacgtcagcgcaataaaaagagcggaaaaacgggcacgtgagtgcccgtcttttcgctagtt 24062884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 33573668 - 33573738
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |||||||||||| ||||||||   || ||||||||  |||||||||||||||||||||||    
T  33573668 ataattttcaaacgttagcgcaaaaaaaagagcgaaaagacgggtacttgagtgcccgtcttttcgctagt 33573738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 555 - 631
Target Start/End: Original strand, 13698490 - 13698566
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaata 631  Q
    ||||||||||| | |||||||||| ||||||||  | | |||||| | |||||||||||||||||| ||||| ||||    
T  13698490 tataattttcaaatgttagcgcaacaaaaagagtggcaagacgggcacgtgagtgcccgtcttttccctagtaaata 13698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 624
Target Start/End: Original strand, 28592866 - 28592934
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 624  Q
    ||||||||||  | ||||||||||||||||||  ||| |||||||| || | |||||||||||||||||    
T  28592866 ataattttcaaccattagcgcaataaaaagagcggaaagacgggtacgtaaatgcccgtcttttcgcta 28592934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 627
Target Start/End: Complemental strand, 9894290 - 9894219
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| ||||||| |||||||||||||   || |||||| | |||||||||  ||||||||||||||    
T  9894290 ataattttcaaacgttagtgcaataaaaagagtgaaaagacgggaatgtgagtgcctatcttttcgctagtt 9894219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 691 - 847
Target Start/End: Complemental strand, 18140 - 17984
Alignment:
Q  691 cttgtatttctaaaagcaaattaatcatacatatatgtgtttctgttcctacgcaagttctgtctcagaaaactgatttggcagaaaagtgtttttacaa 790  Q
    ||||||||  ||||||||||||||||||||||| || ||||  || | |||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  18140 cttgtattattaaaagcaaattaatcatacatacatatgttgttgctgctacacaagttctgtctcagaaaactgatttggcagagaagtgtttttacac 18041  T
Q  791 aagaataacttattaatcacaagagccattcggtgttgttgctgtgacacaggttct 847  Q
    |||||||||||| |||||||||||| ||| | ||||||||||||  ||||| |||||    
T  18040 aagaataacttaataatcacaagagacatacagtgttgttgctgctacacaagttct 17984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 4e-37; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 691 - 850
Target Start/End: Original strand, 29269670 - 29269829
Alignment:
Q  691 cttgtatttctaaaagcaaattaatcatacatatatgtgtttctgttcctacgcaagttctgtctcagaaaactgatttggcagaaaagtgtttttacaa 790  Q
    ||||||||  |||||||||||||||||| |||| || ||||  || | |||| ||||||||||||| ||||| |||||||||||| |||||||||||||     
T  29269670 cttgtattattaaaagcaaattaatcatgcatacatatgttgttgctgctacacaagttctgtctctgaaaagtgatttggcagagaagtgtttttacac 29269769  T
Q  791 aagaataacttattaatcacaagagccattcggtgttgttgctgtgacacaggttctgct 850  Q
    |||||||||||| |||||||||||||||| | ||||||||||||  ||||| ||||||||    
T  29269770 aagaataacttaataatcacaagagccatacagtgttgttgctgctacacaagttctgct 29269829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 5918840 - 5918910
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |||||||||||||||||||||  ||| |||| | | ||||||| ||||||||||||||||    
T  5918840 ataattttcaaacgttagcgcaataaaaagagcggaaagacgagcacgtgagtgtccgtcttttcgctagt 5918910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 555 - 626
Target Start/End: Original strand, 15898968 - 15899039
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||||| ||||||| |||| ||||||||  ||| |||||  | ||||||||||||||||||||||||    
T  15898968 tataattttcaaacgttagtgcaacaaaaagagcggaaagacggacacgtgagtgcccgtcttttcgctagt 15899039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 15044152 - 15044083
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| ||||||||||||||||| ||| ||||  || || | ||||||||||||||||||||||||    
T  15044152 ataattttcaaacgttagcgcaataaaa-gagcagaaaaacaggcacgtgagtgcccgtcttttcgctagt 15044083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 631
Target Start/End: Original strand, 11352970 - 11353035
Alignment:
Q  566 tacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaata 631  Q
    ||||||||||||||||||||||  ||| ||| || | ||||||| |||||||||| ||||||||||    
T  11352970 tacgttagcgcaataaaaagagcggaaagacaggcacgtgagtgtccgtcttttcactagttaata 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 35451108 - 35451035
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 629  Q
    ||||||||||||||||| ||||||||||||||  |||  ||| | | |||||| | ||||||||||||||||||    
T  35451108 ataattttcatacgttaacgcaataaaaagagcggaaaaacgtgcacgtgagtacacgtcttttcgctagttaa 35451035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 574 - 626
Target Start/End: Original strand, 23085650 - 23085702
Alignment:
Q  574 cgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||||||   ||| |||||||| ||||||||||||||||||||||||    
T  23085650 cgcaataaaaagaacggaaagacgggtatgtgagtgcccgtcttttcgctagt 23085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 624
Target Start/End: Complemental strand, 38804526 - 38804458
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 624  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| |  ||| ||||| |||||||||||    
T  38804526 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacatgaatgcccatcttttcgcta 38804458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 623
Target Start/End: Complemental strand, 18994609 - 18994542
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgct 623  Q
    |||||||||| ||||  |||||||||||||||  ||| |||||| | ||||||||| |||||||||||    
T  18994609 ataattttcaaacgtcggcgcaataaaaagagcggaaagacgggcacgtgagtgccagtcttttcgct 18994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 562 - 627
Target Start/End: Original strand, 9280383 - 9280449
Alignment:
Q  562 ttcatacgttagcgcaataaaaagagaag-aacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||| |||||||||||||||||| | | | || |||||||| |||||||||| ||||||||||||||    
T  9280383 ttcaaacgttagcgcaataaaaaaaaacggaaagacgggtatgtgagtgcccatcttttcgctagtt 9280449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 538 - 628
Target Start/End: Original strand, 27275432 - 27275522
Alignment:
Q  538 tcataaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    ||||| |||||||| | |||||||| || | ||| ||||| |||||| ||| ||| |||| ||| ||||||||| || |||||||||||||    
T  27275432 tcatataaaatacagtttataatttacacatgttcgcgcagtaaaaatagaggaaagacgagtatgtgagtgcctgttttttcgctagtta 27275522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 619
Target Start/End: Original strand, 288964 - 289041
Alignment:
Q  542 aaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtctttt 619  Q
    ||||||||| || ||||||||||| | ||||| | ||||||||||| | ||  ||||| | |||||||||||||||||    
T  288964 aaaaaataccatttataattttcaaatgttagtgtaataaaaagagcaaaaacacgggcacgtgagtgcccgtctttt 289041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 626
Target Start/End: Complemental strand, 19367922 - 19367853
Alignment:
Q  557 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||| |||||||| || ||||||||| |||| |||| | | |||| ||||| |||||||||||||    
T  19367922 taattttcaaacgttagcacagtaaaaagagcagaaagacgagcacgtgaatgcccatcttttcgctagt 19367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 4e-22; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 9962762 - 9962668
Alignment:
Q  79 attatggttctacggatgtgaatttgaatgatgataaaacctatccgaattttgttgggagtcaaggtaaaggtaatgagaatgttgaacataat 173  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||    ||||||| ||||||||||||  || |||||||||||||||||||    
T  9962762 attacggttctacggatgtggatttgaatgatgataaaacctatccggtgattgttggtagtcaaggtaaatctactgagaatgttgaacataat 9962668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 27513220 - 27513150
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| || ||||||||||||||| ||||||| |||||  | ||||||||||||||||||||||||    
T  27513220 ataattttcaaactttagcgcaataaaaatagaagaaagacggacacgtgagtgcccgtcttttcgctagt 27513150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 627
Target Start/End: Original strand, 10040607 - 10040678
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| | ||||||||||||||||||| |||| |||||| | ||| ||| |||||||||||||||||    
T  10040607 ataattttcaaatgttagcgcaataaaaagagcagaaagacgggcacgtgggtggccgtcttttcgctagtt 10040678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 15845160 - 15845099
Alignment:
Q  408 gatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattaggcg 469  Q
    ||||||||||||  ||||||| | ||||||||||||||  ||||||||||||||||||||||    
T  15845160 gatttttattttaagtacggtaagtgtaaaggttttgctgttaggaagagtgatattaggcg 15845099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 628
Target Start/End: Complemental strand, 15647000 - 15646928
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| | |||||||| |||||||| ||| ||||    
T  15647000 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagtgctcgtctttttgctggtta 15646928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 5800451 - 5800521
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| || ||||||||||||||||||  ||| |||||  | ||||||| ||||||||||||||||    
T  5800451 ataattttcaaacattagcgcaataaaaagagcggaaagacggacacgtgagtgtccgtcttttcgctagt 5800521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 20149342 - 20149272
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| ||||||| || ||||||||||  ||| ||||||||  |||||| ||||||||||||||||    
T  20149342 ataattttcaaacgttagtgcgataaaaagagtggaaagacgggtacatgagtgtccgtcttttcgctagt 20149272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 626
Target Start/End: Complemental strand, 35213830 - 35213746
Alignment:
Q  542 aaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||| || |||||| |||| | ||||||||||| |||||||| ||| |||||  |  |||||||||||||||| ||||||    
T  35213830 aaaaaataccatttataatattcaaatgttagcgcaattaaaagagaggaaagacggacatatgagtgcccgtctttttgctagt 35213746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 627
Target Start/End: Complemental strand, 2474923 - 2474852
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| ||||||||||| |||||||||  ||| || | | | ||||||||||||||||| |||||||    
T  2474923 ataattttcaaacgttagcgcagtaaaaagagcggaaagatgagcacgtgagtgcccgtcttttggctagtt 2474852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 467
Target Start/End: Complemental strand, 9962314 - 9962255
Alignment:
Q  408 gatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattagg 467  Q
    ||||||||||||  ||||||| ||||||||||||||    ||||||||||||||||||||    
T  9962314 gatttttattttaagtacggtaaatgtaaaggtttttatgttaggaagagtgatattagg 9962255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 471
Target Start/End: Complemental strand, 15453944 - 15453881
Alignment:
Q  408 gatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattaggcgca 471  Q
    ||||||||||||  ||||||| | ||||||||||||    ||||||||||||||||||||||||    
T  15453944 gatttttattttaagtacggtaagtgtaaaggttttattgttaggaagagtgatattaggcgca 15453881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 471
Target Start/End: Original strand, 15519628 - 15519667
Alignment:
Q  432 tgtaaaggttttgccattaggaagagtgatattaggcgca 471  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  15519628 tgtaaaggttttgctgttaggaagagtgatattaggcgca 15519667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 627
Target Start/End: Original strand, 19492076 - 19492147
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| ||||| | |||||||||||||  ||| ||| |  | |||||||||||||||||||||||||    
T  19492076 ataattttcaaacgttggtgcaataaaaagagcggaaagacagacatgtgagtgcccgtcttttcgctagtt 19492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 21080092 - 21080021
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||||| || |||||| ||||||||||| |||| |||||  | || ||||||| |||||||||||||    
T  21080092 tataattttcaaactttagcgtaataaaaagagtagaaagacggacacgtaagtgcccatcttttcgctagt 21080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 626
Target Start/End: Complemental strand, 39465734 - 39465675
Alignment:
Q  567 acgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||| ||||||||||||| |||| |||| | | ||||||| ||||||||||||||||    
T  39465734 acgttagtgcaataaaaagagtagaaagacgagcacgtgagtgtccgtcttttcgctagt 39465675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 15864501 - 15864439
Alignment:
Q  408 gatttttatttttggtacggttaatgtaaaggttttgccattaggaagagtgatattaggcgc 470  Q
    ||||||||||||   |||||| | |||||| |||||||  |||||||||||||||||||||||    
T  15864501 gatttttattttaaatacggtaagtgtaaatgttttgctgttaggaagagtgatattaggcgc 15864439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 633
Target Start/End: Complemental strand, 8036437 - 8036360
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaataat 633  Q
    |||||||||| |||||| || ||||||||||| |||| ||| |  | |||||||| ||||||||||||| | ||||||    
T  8036437 ataattttcaaacgttaacgtaataaaaagagcagaaagacagacacgtgagtgcacgtcttttcgctaatcaataat 8036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 10199520 - 10199447
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 629  Q
    |||||||||| || ||||||||||||||||||  ||| |||||| |  ||| ||||| |||||| |||||||||    
T  10199520 ataattttcaaactttagcgcaataaaaagagcggaaagacgggcacatgaatgcccatctttttgctagttaa 10199447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 23160872 - 23160799
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 629  Q
    |||||||||| ||||| |||||||  ||| || |||| |||||  | ||||| |||||||||||||||||||||    
T  23160872 ataattttcaaacgtttgcgcaatcgaaatagcagaaagacggacacgtgagggcccgtcttttcgctagttaa 23160799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 628
Target Start/End: Complemental strand, 37705702 - 37705630
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||||| ||||||||||||||||||||| |||| ||| | || ||||||||||||||||||||||||||    
T  37705702 ataattttcaaacgttagcgcaataaaaagagcagaaagacagatatgtgagtgcccgtcttttcgctagtta 37705630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 47402507 - 47402437
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |||||| ||||||||||||||  ||| ||| || | || |||||||||||||||||||||    
T  47402507 ataattttcaaacgttaccgcaataaaaagagtggaaagacaggcacgtaagtgcccgtcttttcgctagt 47402437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 560 - 633
Target Start/End: Original strand, 9398168 - 9398240
Alignment:
Q  560 ttttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaataat 633  Q
    |||||| || |||||||| |||||||||  ||| |||||| | |||||||||||||||||||||| ||||||||    
T  9398168 ttttcaaaccttagcgcattaaaaagagtggaaagacgggcacgtgagtgcccgtcttttcgcta-ttaataat 9398240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 626
Target Start/End: Original strand, 34749026 - 34749094
Alignment:
Q  557 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||| |||||||||||||||||||||  ||| |||||| | ||||||| |||||||||| |||||    
T  34749026 taattttcaaacgttagcgcaataaaaagagtggaaagacgggcatgtgagtg-ccgtcttttcactagt 34749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 5965615 - 5965559
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgccc 612  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||    
T  5965615 ataattttcaaacgttagagcaataaaaagagcagaaagacgggcacgtgagtgccc 5965559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 626
Target Start/End: Complemental strand, 650187 - 650120
Alignment:
Q  559 attttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||| | |||||||||||||||||||  ||| |||||| |  ||||||||||||||| |||||||    
T  650187 attttcaaatgttagcgcaataaaaagagcggaaagacgggcacatgagtgcccgtctttgcgctagt 650120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 1581070 - 1580999
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||||| || ||||||||||||||||||  ||| |||||  |  |||||| ||||||||||||||||    
T  1581070 tataattttcaaactttagcgcaataaaaagagcggaaagacggacacctgagtgtccgtcttttcgctagt 1580999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 623
Target Start/End: Complemental strand, 34011083 - 34011016
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgct 623  Q
    |||||||||| ||||||| |||||||||||||  ||| |||||| | |||| |||| |||||||||||    
T  34011083 ataattttcaaacgttagtgcaataaaaagagcggaaagacgggcacgtgactgcctgtcttttcgct 34011016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 557 - 627
Target Start/End: Original strand, 44645080 - 44645150
Alignment:
Q  557 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    ||||||||| |||||||| ||||||||||||  ||| |||||  | ||||| |||| ||||||||||||||    
T  44645080 taattttcaaacgttagcacaataaaaagaggggaaagacggacatgtgagggcccatcttttcgctagtt 44645150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 557 - 627
Target Start/End: Original strand, 44648438 - 44648508
Alignment:
Q  557 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    ||||||||| |||||||| ||||||||||||  ||| |||||  | |||||||||  ||||||||||||||    
T  44648438 taattttcaaacgttagcacaataaaaagagcggaaagacggacatgtgagtgcctatcttttcgctagtt 44648508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 10729292 - 10729219
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 629  Q
    ||||||| || |||||||||||||||||||||  ||| |||| | | |||| | | ||||||||||||||||||    
T  10729292 ataatttccaaacgttagcgcaataaaaagagcggaaagacgtgcacgtgattacacgtcttttcgctagttaa 10729219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 744 - 830
Target Start/End: Complemental strand, 65055 - 64969
Alignment:
Q  744 caagttctgtctcagaaaactgatttggcagaaaagtgtttttacaaaagaataacttattaatcacaagagccattcggtgttgtt 830  Q
    ||||||||||  ||||||| ||||||||||||||| || ||||||| ||||||| ||||||||| ||||||||||| | ||||||||    
T  65055 caagttctgttgcagaaaaatgatttggcagaaaactgcttttacacaagaataccttattaattacaagagccatacagtgttgtt 64969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 21885200 - 21885130
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| | |||||||||| |||||||||||||    
T  21885200 ataattttcaaacgttagagcaataaaaagagcagaaagacgggcacgtgagtgcccatcttttcgctagt 21885130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 34753406 - 34753476
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| || |||||| ||||||||||| |||| |||||| | ||||||||||||||||||||||||    
T  34753406 ataattttcaaacattagcgtaataaaaagagcagaaagacgggcacgtgagtgcccgtcttttcgctagt 34753476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 538 - 626
Target Start/End: Complemental strand, 25915105 - 25915017
Alignment:
Q  538 tcataaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| ||  | ||||||||||| ||||||||||||||| ||||| |||| |||  | | ||||||||||||||||||||||||    
T  25915105 tcataaaaaacaccgtttataattttcaaacgttagcgcaataataagagcagaaagacaagcacgtgagtgcccgtcttttcgctagt 25915017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 13450355 - 13450425
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| || ||||||||||||||||||  ||| |||||| | |||||| |||||||||||||||||    
T  13450355 ataattttcaaacattagcgcaataaaaagagcggaaagacgggcacgtgagtacccgtcttttcgctagt 13450425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 9192034 - 9191964
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| ||||||||||||||||| |||   || |||||| | ||||||| ||||||||||||||||    
T  9192034 ataattttcaaacgttagcgcaataaaatgagccaaaagacgggcacgtgagtggccgtcttttcgctagt 9191964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 628
Target Start/End: Complemental strand, 33133858 - 33133800
Alignment:
Q  570 ttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    ||||||||||||||||||  ||| |||||| | |||||||| |||||||||||||||||    
T  33133858 ttagcgcaataaaaagagcggaaagacgggcacgtgagtgctcgtcttttcgctagtta 33133800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 628
Target Start/End: Original strand, 1397275 - 1397347
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||| | | ||||||| |||||||||||  ||| |||||||| ||| |||||| |||||||||||||||    
T  1397275 ataattttaaaaggttagcgtaataaaaagagtggaatgacgggtacgtgggtgcccatcttttcgctagtta 1397347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 555 - 631
Target Start/End: Complemental strand, 13594128 - 13594052
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaata 631  Q
    ||||||||||| |||||||||||||||||||||  ||| |||| ||| || |||| || |||||||| |||| ||||    
T  13594128 tataattttcaaacgttagcgcaataaaaagagcggaaagacgtgtacgtaagtgtccatcttttcgttagtaaata 13594052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 628
Target Start/End: Complemental strand, 33134401 - 33134329
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||||| || ||||||||||||||||||  ||| |||||  | ||||||  ||||||||||||||||||    
T  33134401 ataattttcaaacattagcgcaataaaaagagtggaaagacggacatgtgagtatccgtcttttcgctagtta 33134329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 628
Target Start/End: Complemental strand, 36817382 - 36817310
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||||| |||||||||||||||||| ||  |||  ||||||| ||||||| || |||||||| ||||||    
T  36817382 ataattttcaaacgttagcgcaataaaaaaagtggaaaaacgggtacgtgagtgtccatcttttcggtagtta 36817310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 626
Target Start/End: Original strand, 18746251 - 18746318
Alignment:
Q  559 attttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||| || |||||||||||||||||| |||| |||||| |  ||||||| |||||||| ||||||    
T  18746251 attttcaaactttagcgcaataaaaagagcagaaagacggggacatgagtgctcgtctttttgctagt 18746318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 35125799 - 35125740
Alignment:
Q  569 gttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||| |||||||||||| |||| | |||||| |||||||  |||||||||||||||||    
T  35125799 gttagcacaataaaaagagcagaaaggcgggtacgtgagtgtacgtcttttcgctagtta 35125740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 8875331 - 8875261
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| | |||||||||||||||||||  ||| |||||| | ||| | |||||||| |||||||||    
T  8875331 ataattttcaaatgttagcgcaataaaaagagcggaaagacgggcacgtgggagcccgtctattcgctagt 8875261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 9169952 - 9170022
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||| | |||||||||||||||||||||  ||| ||| |  | |||| |||||||||||||||||||    
T  9169952 ataatttttaaacgttagcgcaataaaaagagtggaaagacagtcacgtgattgcccgtcttttcgctagt 9170022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 19134063 - 19134133
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||| || | |||| |||||||||||||| ||||  |||| || ||||||| ||||||||||||||||    
T  19134063 ataatttacacatgttaacgcaataaaaagagcagaaaaacggatatgtgagtgtccgtcttttcgctagt 19134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 587
Target Start/End: Complemental strand, 7886219 - 7886174
Alignment:
Q  542 aaaaaatacaatctataattttcatacgttagcgcaataaaaagag 587  Q
    ||||||||| || ||||||||| | |||||||||||||||||||||    
T  7886219 aaaaaataccatttataatttttaaacgttagcgcaataaaaagag 7886174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 620
Target Start/End: Original strand, 20702726 - 20702790
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttc 620  Q
    |||||||||| |||||||||||||||||||||  ||| |||||| | ||||||||||||||||||    
T  20702726 ataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagtgcccgtcttttc 20702790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 628
Target Start/End: Complemental strand, 17702435 - 17702363
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||||| ||||||||||| |||||||||  ||| || ||| |  |||||||||||||||||||||||||    
T  17702435 ataattttcaaacgttagcgcagtaaaaagagcggaaagaggggcacatgagtgcccgtcttttcgctagtta 17702363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 627
Target Start/End: Original strand, 1363929 - 1364000
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| | ||||||||||||||||||  |||| | |||  | |||||||||||||||||||||||||    
T  1363929 ataattttcaaaggttagcgcaataaaaagaacagaaagtcggacacgtgagtgcccgtcttttcgctagtt 1364000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 627
Target Start/End: Original strand, 35519274 - 35519345
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| |||||| | ||||||||||||  ||| |||||  | |||||||||||||||||||||||||    
T  35519274 ataattttcaaacgttaacacaataaaaagagcggaaagacggacatgtgagtgcccgtcttttcgctagtt 35519345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 5190634 - 5190704
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| | |||||||||||||||||||  ||| ||| |  | ||||||||||||||||||||||||    
T  5190634 ataattttcaaatgttagcgcaataaaaagagcggaaagacagacaggtgagtgcccgtcttttcgctagt 5190704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 2290919 - 2290849
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| || ||||||||||||||||| | ||| || ||| |  |||||| ||||||||||||||||    
T  2290919 ataattttcaaacattagcgcaataaaaagaaaggaaagatgggcacttgagtgtccgtcttttcgctagt 2290849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 7438117 - 7438047
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||| || ||||||||| |||||||| ||  ||| |||||| | ||||| ||||||||||||||||||    
T  7438117 ataatttacaaacgttagcgtaataaaaatagcggaaagacgggcacgtgagggcccgtcttttcgctagt 7438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 37013165 - 37013096
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| || ||||| |||||||||||| ||||  ||||| | ||||||| ||||||||||||||||    
T  37013165 ataattttcaaactttagcacaataaaaagagcagaa-aacgggcatgtgagtgtccgtcttttcgctagt 37013096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 557 - 627
Target Start/End: Complemental strand, 38720874 - 38720804
Alignment:
Q  557 taattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    ||||||||| |||||||| ||||||||||||  ||| |||||  | ||||| |||| ||||||||||||||    
T  38720874 taattttcaaacgttagcacaataaaaagaggggaaagacggacatgtgagggcccatcttttcgctagtt 38720804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 620
Target Start/End: Original strand, 37831137 - 37831202
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttc 620  Q
    ||||||||| | |||||||||||||||||| || |||| ||  || | ||||||||||||||||||    
T  37831137 tataattttgaaacgttagcgcaataaaaatagcagaaagattggcacgtgagtgcccgtcttttc 37831202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 239 - 169
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |||||||||||| ||||||||   || ||||||||  |||||||||||||||||||||||    
T  239 ataattttcaaacgttagcgcaaaaaaaagagcgaaaagacgggtacttgagtgcccgtcttttcgctagt 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 57485 - 57415
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |||||||||||||||||| || |||| |||||| | |||||||||||| ||||| |||||    
T  57485 ataattttcaaacgttagcgcaataaaaatagcagaaagacgggcacgtgagtgcccgtattttctctagt 57415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 555 - 624
Target Start/End: Complemental strand, 1611881 - 1611812
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 624  Q
    ||||||||||| |||||||| |||||||||||| |||| |||||| | ||||||| || |||||||||||    
T  1611881 tataattttcaaacgttagcacaataaaaagagcagaaagacgggcacgtgagtgtccatcttttcgcta 1611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 624
Target Start/End: Original strand, 8990556 - 8990624
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgcta 624  Q
    |||||||||| ||||| || |||||||||||| |||| |||||  | |||||||| |||||||||||||    
T  8990556 ataattttcaaacgttggcacaataaaaagagcagaaagacggacacgtgagtgctcgtcttttcgcta 8990624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 627
Target Start/End: Original strand, 43370381 - 43370452
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| |  |||| ||||||||||||| |||| |||||  | ||||||||||||||||| |||||||    
T  43370381 ataattttcaaatattagtgcaataaaaagagcagaaagacggacaggtgagtgcccgtctttttgctagtt 43370452  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 621
Target Start/End: Original strand, 24836953 - 24837018
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcg 621  Q
    |||||||| | | |||||||||||||||||||  ||| |||| | | |||||||||||||||||||    
T  24836953 ataatttttaaaagttagcgcaataaaaagagcggaaagacgtgcacgtgagtgcccgtcttttcg 24837018  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 627
Target Start/End: Complemental strand, 21158 - 21086
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    ||||||||||| | |||| | ||||||||||||  ||| |||||| | |||||||||||||||||||||||||    
T  21158 tataattttcaaatgttaacacaataaaaagagcggaaagacgggcatgtgagtgcccgtcttttcgctagtt 21086  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000008; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 627
Target Start/End: Complemental strand, 18461173 - 18461102
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| ||||||||||||||||||||||| || ||     | |||||||||||||||||||||||||    
T  18461173 ataattttcaaacgttagcgcaataaaaagagaataaagataaacatgtgagtgcccgtcttttcgctagtt 18461102  T

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Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 556 - 627
Target Start/End: Complemental strand, 22258476 - 22258405
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||||||||||| | ||||||||||||  || |||||| | | || ||||||||||||||||||||    
T  22258476 ataattttcatacgttagtgaaataaaaagagagaaaagacgggcacgagattgcccgtcttttcgctagtt 22258405  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 5811987 - 5811917
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| | ||||||| |||||||||||  ||| |||||| | |||||||| |||||||||||||||    
T  5811987 ataattttcaaatgttagcgaaataaaaagagcggaaagacgggcatgtgagtgctcgtcttttcgctagt 5811917  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 626
Target Start/End: Original strand, 22102620 - 22102690
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |||||| ||||||||||||||  ||| || ||| | |||||||||||||||||| |||||    
T  22102620 ataattttcaaacgttaacgcaataaaaagagtggaaagaggggcacgtgagtgcccgtcttttcactagt 22102690  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 628
Target Start/End: Complemental strand, 49758281 - 49758211
Alignment:
Q  558 aattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtta 628  Q
    |||||||| |||||| ||||||||||||||   || |||||| | |||||||||||||||| |||||||||    
T  49758281 aattttcaaacgttaacgcaataaaaagagcgaaaagacgggcacgtgagtgcccgtctttacgctagtta 49758211  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 625
Target Start/End: Complemental strand, 21091846 - 21091777
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctag 625  Q
    |||||||||| ||||||| |||||||||||||| ||| |||||  | ||||||| || ||||||||||||    
T  21091846 ataattttcaaacgttagtgcaataaaaagagaggaaagacggacacgtgagtgtccatcttttcgctag 21091777  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 628
Target Start/End: Original strand, 7777752 - 7777839
Alignment:
Q  542 aaaaaatacaatctataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtg-cccgtcttttcgctagtta 628  Q
    ||||||||| ||  |||||||||| || |||||| |||||||||||  | | |||||| | ||||||| |||||||||||||||||||    
T  7777752 aaaaaataccattaataattttcaaacattagcgtaataaaaagagcggtaagacgggcacgtgagtgccccgtcttttcgctagtta 7777839  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 627
Target Start/End: Complemental strand, 18386785 - 18386715
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    |||||||||| | |||||||||||||||||||  ||| |||||  | ||||| |||||||||||||||||||    
T  18386785 ataattttca-atgttagcgcaataaaaagagtggaatgacggacatgtgagagcccgtcttttcgctagtt 18386715  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 626
Target Start/End: Complemental strand, 18388651 - 18388580
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||||| ||||||| |||||||||||||  ||| ||| |  | ||||||||||||||||| ||||||    
T  18388651 tataattttcaaacgttagggcaataaaaagagcggaaagactgccacgtgagtgcccgtctttttgctagt 18388580  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 627
Target Start/End: Original strand, 5530819 - 5530885
Alignment:
Q  561 tttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagtt 627  Q
    ||||| ||||||  ||||||||||||| |||| |||||| | |||||||||  ||||||||||||||    
T  5530819 tttcaaacgttaatgcaataaaaagagcagaaagacgggcacgtgagtgccgatcttttcgctagtt 5530885  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 21824291 - 21824221
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    |||||||||| |  |||| |||||||||||||  ||| || ||| | ||||||||||||||||||||||||    
T  21824291 ataattttcaaatattagtgcaataaaaagagctgaaagatgggaacgtgagtgcccgtcttttcgctagt 21824221  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 626
Target Start/End: Original strand, 24100 - 24171
Alignment:
Q  555 tataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagt 626  Q
    ||||||||| | ||||||||||||||||||||   ||| |||| |||  ||||||| |||||||||||||||    
T  24100 tataatttttaaacgttagcgcaataaaaagaacggaaagacgagtacatgagtgctcgtcttttcgctagt 24171  T

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Target: scaffold0268 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 629
Target Start/End: Original strand, 21411 - 21484
Alignment:
Q  556 ataattttcatacgttagcgcaataaaaagagaagaacgacgggtaagtgagtgcccgtcttttcgctagttaa 629  Q
    |||||||||| || ||||||||||||||||||  ||| |||||  | | |||||||| |||||| |||||||||    
T  21411 ataattttcaaactttagcgcaataaaaagagcggaaagacggacacgcgagtgcccatctttttgctagttaa 21484  T

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