View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12419_high_12 (Length: 453)

Name: NF12419_high_12
Description: NF12419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12419_high_12
NF12419_high_12
[»] chr8 (49 HSPs)
chr8 (1-442)||(24692032-24692470)
chr8 (11-74)||(17006914-17006977)
chr8 (11-74)||(17570270-17570333)
chr8 (1-62)||(28463626-28463688)
chr8 (351-426)||(9379037-9379112)
chr8 (23-77)||(8587170-8587224)
chr8 (20-78)||(33057667-33057725)
chr8 (9-78)||(12763716-12763785)
chr8 (19-60)||(15688047-15688088)
chr8 (9-78)||(25601062-25601131)
chr8 (9-77)||(28999110-28999178)
chr8 (9-77)||(31654613-31654681)
chr8 (21-81)||(39571199-39571259)
chr8 (9-79)||(54674-54744)
chr8 (9-79)||(2890224-2890294)
chr8 (21-79)||(7785776-7785834)
chr8 (9-79)||(7785840-7785910)
chr8 (9-79)||(7805761-7805831)
chr8 (20-58)||(31758700-31758738)
chr8 (21-78)||(54611-54668)
chr8 (21-78)||(2890161-2890218)
chr8 (9-62)||(3304340-3304393)
chr8 (9-62)||(6552670-6552723)
chr8 (9-62)||(12343202-12343255)
chr8 (9-62)||(13578872-13578925)
chr8 (9-62)||(32114537-32114590)
chr8 (21-78)||(43199353-43199410)
chr8 (9-62)||(43199416-43199469)
chr8 (9-62)||(44498249-44498302)
chr8 (21-77)||(6552729-6552785)
chr8 (21-77)||(33289261-33289317)
chr8 (21-80)||(12763651-12763710)
chr8 (20-79)||(27422263-27422322)
chr8 (21-80)||(32211360-32211419)
chr8 (21-79)||(7805697-7805755)
chr8 (24-66)||(41450889-41450931)
chr8 (21-79)||(44498185-44498243)
chr8 (31-80)||(4245665-4245714)
chr8 (21-78)||(8587244-8587301)
chr8 (21-62)||(12343155-12343196)
chr8 (21-62)||(13578931-13578972)
chr8 (21-62)||(15888367-15888408)
chr8 (9-62)||(15888414-15888467)
chr8 (21-78)||(25600999-25601056)
chr8 (9-62)||(32211425-32211478)
chr8 (9-62)||(39571265-39571318)
chr8 (21-77)||(3304278-3304334)
chr8 (19-63)||(17006983-17007027)
chr8 (19-63)||(17570220-17570264)
[»] chr5 (34 HSPs)
chr5 (238-439)||(17181794-17181995)
chr5 (19-65)||(36595786-36595832)
chr5 (9-77)||(26350412-26350480)
chr5 (9-80)||(36563600-36563671)
chr5 (21-79)||(13033125-13033183)
chr5 (9-77)||(11795168-11795236)
chr5 (9-80)||(4443957-4444028)
chr5 (11-62)||(35584437-35584488)
chr5 (21-80)||(41989404-41989463)
chr5 (18-76)||(5174835-5174893)
chr5 (21-79)||(9395424-9395482)
chr5 (21-79)||(13103098-13103156)
chr5 (355-409)||(16762997-16763051)
chr5 (9-79)||(37149017-37149087)
chr5 (21-74)||(4444034-4444087)
chr5 (9-62)||(9395365-9395418)
chr5 (9-62)||(13033066-13033119)
chr5 (9-62)||(13103039-13103092)
chr5 (21-78)||(17025698-17025755)
chr5 (9-62)||(23359957-23360010)
chr5 (21-78)||(36563537-36563594)
chr5 (21-77)||(6126898-6126954)
chr5 (9-80)||(17025621-17025692)
chr5 (9-79)||(582987-583057)
chr5 (24-73)||(3346896-3346946)
chr5 (9-79)||(20848072-20848142)
chr5 (21-62)||(11795242-11795283)
chr5 (21-78)||(21576020-21576077)
chr5 (21-62)||(23360016-23360057)
chr5 (23-68)||(27081016-27081061)
chr5 (21-78)||(37642028-37642085)
chr5 (9-78)||(38361753-38361822)
chr5 (9-62)||(41989469-41989522)
chr5 (21-77)||(37148955-37149011)
[»] chr1 (45 HSPs)
chr1 (9-78)||(11897053-11897122)
chr1 (1-78)||(16448161-16448239)
chr1 (16-79)||(21537938-21538001)
chr1 (22-81)||(11897129-11897188)
chr1 (19-78)||(30800497-30800556)
chr1 (21-79)||(47588335-47588393)
chr1 (21-78)||(17556827-17556884)
chr1 (9-65)||(47588399-47588455)
chr1 (21-79)||(14984911-14984969)
chr1 (9-62)||(17556767-17556821)
chr1 (9-79)||(26471127-26471197)
chr1 (9-79)||(27159420-27159490)
chr1 (9-79)||(44668155-44668225)
chr1 (9-62)||(9981662-9981715)
chr1 (9-62)||(14984852-14984905)
chr1 (21-78)||(25694393-25694450)
chr1 (9-62)||(31842857-31842910)
chr1 (1-77)||(37552141-37552218)
chr1 (9-62)||(39402028-39402081)
chr1 (21-62)||(44955221-44955262)
chr1 (9-62)||(47216761-47216814)
chr1 (9-62)||(47777543-47777596)
chr1 (21-77)||(11796007-11796063)
chr1 (23-79)||(12483626-12483682)
chr1 (21-77)||(27159358-27159414)
chr1 (21-77)||(31842795-31842851)
chr1 (21-77)||(39401966-39402022)
chr1 (21-77)||(44668093-44668149)
chr1 (21-77)||(47777481-47777537)
chr1 (21-80)||(1050962-1051021)
chr1 (9-80)||(11795930-11796001)
chr1 (23-78)||(12213550-12213605)
chr1 (21-80)||(34042770-34042829)
chr1 (21-79)||(9981721-9981779)
chr1 (33-67)||(11989791-11989825)
chr1 (9-79)||(12483690-12483760)
chr1 (9-62)||(1050903-1050956)
chr1 (9-54)||(11774536-11774581)
chr1 (23-72)||(12043609-12043658)
chr1 (9-62)||(23278063-23278116)
chr1 (9-62)||(34042711-34042764)
chr1 (9-62)||(44955268-44955321)
chr1 (21-62)||(47216714-47216755)
chr1 (23-79)||(5392222-5392278)
chr1 (21-77)||(26471065-26471121)
[»] chr7 (40 HSPs)
chr7 (1-77)||(7269458-7269535)
chr7 (21-77)||(9575483-9575539)
chr7 (22-78)||(28469480-28469536)
chr7 (19-66)||(36033237-36033284)
chr7 (24-78)||(7661075-7661129)
chr7 (9-79)||(22285697-22285767)
chr7 (21-79)||(36583469-36583527)
chr7 (9-62)||(7482240-7482293)
chr7 (21-77)||(94318-94374)
chr7 (9-77)||(36016258-36016326)
chr7 (9-81)||(46840856-46840928)
chr7 (9-80)||(1565791-1565862)
chr7 (21-79)||(1738445-1738503)
chr7 (9-79)||(1738509-1738579)
chr7 (9-79)||(7240747-7240817)
chr7 (21-79)||(7240823-7240881)
chr7 (21-79)||(7482299-7482357)
chr7 (21-78)||(1565728-1565785)
chr7 (9-62)||(9268771-9268824)
chr7 (21-78)||(9268830-9268887)
chr7 (9-62)||(23314201-23314254)
chr7 (9-62)||(31319461-31319514)
chr7 (9-62)||(38063975-38064028)
chr7 (9-62)||(38441475-38441528)
chr7 (11-74)||(14706698-14706762)
chr7 (21-77)||(22285773-22285829)
chr7 (21-77)||(46840934-46840990)
chr7 (20-62)||(7269420-7269462)
chr7 (21-79)||(38063911-38063969)
chr7 (9-62)||(94380-94433)
chr7 (9-62)||(28536813-28536866)
chr7 (21-62)||(31319414-31319455)
chr7 (21-62)||(33418450-33418491)
chr7 (21-62)||(36016211-36016252)
chr7 (9-62)||(36583410-36583463)
chr7 (21-62)||(38441534-38441575)
chr7 (21-77)||(23314139-23314195)
chr7 (23-75)||(24097953-24098005)
chr7 (9-61)||(33418392-33418444)
chr7 (22-58)||(46877665-46877701)
[»] chr6 (33 HSPs)
chr6 (9-78)||(7597039-7597108)
chr6 (23-78)||(3788113-3788168)
chr6 (9-79)||(13853655-13853725)
chr6 (264-385)||(3353607-3353728)
chr6 (21-77)||(8417793-8417849)
chr6 (21-80)||(8099604-8099663)
chr6 (21-80)||(9644770-9644829)
chr6 (21-80)||(9650787-9650846)
chr6 (9-79)||(8383031-8383101)
chr6 (9-79)||(8417855-8417925)
chr6 (21-79)||(14236697-14236755)
chr6 (21-79)||(26602397-26602455)
chr6 (9-79)||(33052856-33052926)
chr6 (9-62)||(2830350-2830403)
chr6 (9-78)||(6143553-6143622)
chr6 (9-62)||(6330130-6330183)
chr6 (21-78)||(6330189-6330246)
chr6 (21-78)||(11572144-11572201)
chr6 (9-62)||(11572207-11572260)
chr6 (21-78)||(13853592-13853649)
chr6 (232-281)||(24735560-24735609)
chr6 (9-62)||(26602338-26602391)
chr6 (21-78)||(28747133-28747190)
chr6 (21-77)||(2830409-2830465)
chr6 (21-77)||(8382969-8383025)
chr6 (38-79)||(3788034-3788075)
chr6 (21-78)||(6068640-6068697)
chr6 (9-62)||(8099545-8099598)
chr6 (9-62)||(13043773-13043826)
chr6 (9-62)||(35031063-35031116)
chr6 (21-77)||(17992062-17992118)
chr6 (9-61)||(28747196-28747248)
chr6 (21-81)||(33052790-33052850)
[»] chr4 (50 HSPs)
chr4 (9-62)||(17344228-17344281)
chr4 (1-77)||(1716301-1716376)
chr4 (9-80)||(43900546-43900617)
chr4 (22-80)||(17344288-17344346)
chr4 (21-78)||(3993050-3993107)
chr4 (21-77)||(42797806-42797862)
chr4 (9-80)||(41469828-41469899)
chr4 (1-63)||(50430471-50430534)
chr4 (9-79)||(3372119-3372189)
chr4 (21-79)||(3422134-3422192)
chr4 (19-77)||(4780367-4780425)
chr4 (21-79)||(41469764-41469822)
chr4 (9-67)||(41615738-41615796)
chr4 (9-79)||(47833609-47833679)
chr4 (21-79)||(47838615-47838673)
chr4 (9-79)||(48336261-48336331)
chr4 (9-62)||(20538748-20538801)
chr4 (9-62)||(24704385-24704438)
chr4 (21-78)||(24704444-24704501)
chr4 (9-78)||(29845644-29845713)
chr4 (9-62)||(33621811-33621864)
chr4 (9-78)||(40913251-40913320)
chr4 (9-62)||(46797740-46797793)
chr4 (9-78)||(47838679-47838748)
chr4 (20-77)||(51894582-51894639)
chr4 (21-78)||(52756749-52756806)
chr4 (9-62)||(53337385-53337438)
chr4 (21-77)||(6121893-6121949)
chr4 (21-77)||(47833685-47833741)
chr4 (19-62)||(38160387-38160430)
chr4 (23-58)||(41594673-41594708)
chr4 (9-79)||(3992974-3993044)
chr4 (21-79)||(33621870-33621928)
chr4 (9-79)||(42797730-42797800)
chr4 (21-79)||(48336337-48336395)
chr4 (9-62)||(3422076-3422128)
chr4 (9-62)||(3904745-3904798)
chr4 (9-62)||(5986891-5986944)
chr4 (9-62)||(6121955-6122008)
chr4 (21-62)||(7579384-7579425)
chr4 (9-62)||(25855098-25855151)
chr4 (9-62)||(26231592-26231645)
chr4 (9-62)||(33551216-33551269)
chr4 (9-62)||(52756690-52756743)
chr4 (21-78)||(53337444-53337501)
chr4 (21-77)||(3372195-3372251)
chr4 (23-79)||(5986952-5987008)
chr4 (21-77)||(20538686-20538742)
chr4 (22-66)||(23226014-23226058)
chr4 (21-77)||(46797799-46797855)
[»] chr3 (59 HSPs)
chr3 (9-81)||(9111556-9111628)
chr3 (9-78)||(33942994-33943063)
chr3 (9-77)||(35513473-35513541)
chr3 (9-80)||(8817448-8817519)
chr3 (22-80)||(9027139-9027197)
chr3 (9-78)||(46208029-46208098)
chr3 (21-78)||(46208104-46208161)
chr3 (9-77)||(17653712-17653780)
chr3 (21-77)||(21295326-21295382)
chr3 (9-77)||(37508921-37508989)
chr3 (9-65)||(51406685-51406741)
chr3 (21-80)||(10298053-10298112)
chr3 (21-68)||(33942941-33942988)
chr3 (21-80)||(40690993-40691052)
chr3 (1-79)||(42170399-42170478)
chr3 (9-80)||(44785458-44785529)
chr3 (9-79)||(4238592-4238662)
chr3 (9-79)||(21295388-21295458)
chr3 (9-79)||(22721929-22721999)
chr3 (9-79)||(34080092-34080162)
chr3 (9-62)||(2787894-2787947)
chr3 (9-62)||(10297994-10298047)
chr3 (9-62)||(19557114-19557167)
chr3 (9-78)||(36095742-36095811)
chr3 (21-78)||(49823380-49823437)
chr3 (9-62)||(49823443-49823496)
chr3 (9-61)||(6013398-6013450)
chr3 (21-77)||(19557052-19557108)
chr3 (20-80)||(26019477-26019537)
chr3 (21-77)||(34080030-34080086)
chr3 (21-77)||(38964466-38964522)
chr3 (363-427)||(42087505-42087569)
chr3 (21-77)||(48340471-48340527)
chr3 (21-80)||(17653786-17653845)
chr3 (31-70)||(29285842-29285881)
chr3 (9-79)||(8437423-8437493)
chr3 (21-79)||(8817384-8817442)
chr3 (20-58)||(14848276-14848314)
chr3 (20-78)||(34988074-34988132)
chr3 (9-79)||(38964390-38964460)
chr3 (20-62)||(42170361-42170403)
chr3 (33-79)||(42299651-42299697)
chr3 (9-79)||(42507417-42507487)
chr3 (23-73)||(43323064-43323114)
chr3 (21-62)||(4238668-4238709)
chr3 (21-78)||(8437499-8437556)
chr3 (21-62)||(9111509-9111550)
chr3 (45-78)||(9190145-9190178)
chr3 (21-62)||(22722005-22722046)
chr3 (21-62)||(37508995-37509036)
chr3 (9-62)||(40691058-40691111)
chr3 (21-62)||(42507370-42507411)
chr3 (21-62)||(44785411-44785452)
chr3 (9-62)||(48340412-48340465)
chr3 (21-78)||(51406747-51406804)
chr3 (21-77)||(2787832-2787888)
chr3 (20-80)||(9213513-9213573)
chr3 (22-78)||(26001065-26001121)
chr3 (23-59)||(33128224-33128260)
[»] chr2 (40 HSPs)
chr2 (9-58)||(16734802-16734851)
chr2 (21-79)||(41492894-41492952)
chr2 (21-82)||(3055632-3055693)
chr2 (23-68)||(12170408-12170453)
chr2 (9-62)||(16044379-16044432)
chr2 (9-62)||(37666672-37666725)
chr2 (7-62)||(36688897-36688952)
chr2 (21-80)||(37990010-37990069)
chr2 (9-80)||(41478701-41478772)
chr2 (21-79)||(6648517-6648575)
chr2 (21-79)||(9047753-9047811)
chr2 (9-79)||(15372224-15372294)
chr2 (9-79)||(37990075-37990145)
chr2 (21-79)||(41478637-41478695)
chr2 (9-62)||(3055573-3055626)
chr2 (9-62)||(4683994-4684047)
chr2 (9-62)||(13197772-13197825)
chr2 (9-62)||(15896857-15896910)
chr2 (21-78)||(38917521-38917578)
chr2 (9-62)||(44397562-44397615)
chr2 (9-62)||(44398701-44398754)
chr2 (21-78)||(44398760-44398817)
chr2 (21-77)||(12337937-12337993)
chr2 (21-77)||(13197710-13197766)
chr2 (21-77)||(15372300-15372356)
chr2 (21-77)||(15896916-15896972)
chr2 (9-77)||(31150653-31150721)
chr2 (21-56)||(31726809-31726844)
chr2 (21-79)||(16243781-16243839)
chr2 (12-78)||(30852682-30852748)
chr2 (21-79)||(37666608-37666666)
chr2 (9-62)||(4553072-4553125)
chr2 (9-62)||(9047817-9047870)
chr2 (9-62)||(13344499-13344552)
chr2 (21-78)||(13344558-13344615)
chr2 (9-62)||(16243845-16243898)
chr2 (21-78)||(30099181-30099238)
chr2 (21-62)||(44397621-44397662)
chr2 (21-77)||(16044317-16044373)
chr2 (23-79)||(23227348-23227404)
[»] scaffold0011 (2 HSPs)
scaffold0011 (9-77)||(231365-231433)
scaffold0011 (27-86)||(231294-231353)
[»] scaffold0009 (2 HSPs)
scaffold0009 (9-80)||(49502-49573)
scaffold0009 (23-77)||(49581-49635)
[»] scaffold0482 (2 HSPs)
scaffold0482 (9-79)||(12858-12928)
scaffold0482 (21-79)||(12934-12992)
[»] scaffold0204 (2 HSPs)
scaffold0204 (9-79)||(23783-23853)
scaffold0204 (21-79)||(23859-23917)
[»] scaffold1707 (2 HSPs)
scaffold1707 (9-62)||(1350-1403)
scaffold1707 (21-62)||(1409-1450)
[»] scaffold0464 (2 HSPs)
scaffold0464 (9-62)||(6193-6246)
scaffold0464 (21-79)||(6129-6187)
[»] scaffold0415 (1 HSPs)
scaffold0415 (9-78)||(13788-13857)
[»] scaffold0063 (1 HSPs)
scaffold0063 (21-78)||(53340-53397)


Alignment Details
Target: chr8 (Bit Score: 334; Significance: 0; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 24692032 - 24692470
Alignment:
Q  1 atctggttaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttgacatcaaaattttagaaa- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||     
T  24692032 atctggttaaaattcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatttgacatcaaaattttagaaaa 24692131  T
Q  100 ttttacataattaacnnnnnnngaaatcttttagaacagcattagattggatcattagtatacactgaaattcagctcttatcgcttagattcgttnnnn 199  Q
    ||||||||||  ||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  24692132 ttttacataacaaa----aaaagaaatcttttagaacagcattagattggatcattagtatacactgaaattcagctcttatcgcttagattcgttaaaa 24692227  T
Q  200 nnnntaaatagatcaggagtaagaattaaaagttacaatacaaacctcagtctgaagtttttgattctgagcttgaagtgcatcattatcagccttaata 299  Q
         ||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24692228 aaaaaaaaaaaatcatgagtaagaattaaaagctacaatacaaacctcagtctgaagtttttgattctgagcttgaagtgcatcattatcagccttaata 24692327  T
Q  300 gtatcatattgtcttttaagaacatcatagtctttctctaactgttttgtcttccacctagcccttctgttttgaaaccatatagcaatctgtcttggct 399  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24692328 gtatcatattgtcttttgagaacatcatagtctttctctaactgttttgtcttccacctagcccttctgttttgaaaccatatagcaatttgtcttggct 24692427  T
Q  400 gcaatccaagagctcttgctagctgcattttcctcacaggttc 442  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  24692428 gcaatccaagagctcttgctagctgcattttcctctcaggttc 24692470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 17006977 - 17006914
Alignment:
Q  11 aattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaaggga 74  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  17006977 aattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 17570270 - 17570333
Alignment:
Q  11 aattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaaggga 74  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  17570270 aattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28463688 - 28463626
Alignment:
Q  1 atctggtt-aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||| |||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaata 28463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 426
Target Start/End: Complemental strand, 9379112 - 9379037
Alignment:
Q  351 ttccacctagcccttctgttttgaaaccatatagcaatctgtcttggctgcaatccaagagctcttgctagctgca 426  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||||||||||||  |||| |||| |||||    
T  9379112 ttccatctagctcttttgttttgaaaccatatagcaacttgtcttggctgcaatccaagctctctagctaactgca 9379037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 8587224 - 8587170
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||| |||||||||||||||||| || || ||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 33057667 - 33057725
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| || | |||||||    
T  33057667 cagatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 12763716 - 12763785
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||||| || ||| |||||    
T  12763716 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 15688088 - 15688047
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaa 60  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  15688088 tcagatacatcaacttttgttgacccaactttctcttataaa 15688047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 25601062 - 25601131
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| ||||| ||| |||||    
T  25601062 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 28999110 - 28999178
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||  ||||||||||| ||||||||||| |||||||| |||||||||| | |||| ||||||    
T  28999110 aaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaataaaaccgaatggagta 28999178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 31654681 - 31654613
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||||||||    
T  31654681 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 39571259 - 39571199
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 81  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||||    
T  39571259 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttg 39571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 54674 - 54744
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  54674 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 2890224 - 2890294
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  2890224 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 7785834 - 7785776
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  7785834 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7785840 - 7785910
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  7785840 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7805761 - 7805831
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  7805761 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 31758700 - 31758738
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttata 58  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  31758700 cagattcatcaacttttgttgacctaactttctcttata 31758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 54668 - 54611
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  54668 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 2890218 - 2890161
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  2890218 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 3304340 - 3304393
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  3304340 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 3304393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 6552723 - 6552670
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  6552723 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 6552670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 12343202 - 12343255
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  12343202 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 12343255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 13578925 - 13578872
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| ||||||  |||||| ||||||||| |||||||||||||||    
T  13578925 aaaattcagttcaaatacattcacttttattgacctaaatttctcttataaata 13578872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 32114537 - 32114590
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  32114537 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 32114590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 43199410 - 43199353
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  43199410 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 43199416 - 43199469
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  43199416 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 43199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 44498249 - 44498302
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  44498249 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 44498302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 6552729 - 6552785
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  6552729 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 33289317 - 33289261
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  33289317 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 12763710 - 12763651
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || |||||||||||    
T  12763710 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtattt 12763651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 27422263 - 27422322
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||  | ||||||||||| || ||||||||||||||| || |||||||||||||    
T  27422263 cagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 32211419 - 32211360
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||| ||||||||||| ||  |||||||||||||| || || |||||||||||    
T  32211419 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 7805755 - 7805697
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||| ||||| ||  |||||||||||||| || || ||||||||||    
T  7805755 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 41450931 - 41450889
Alignment:
Q  24 tacatcaacttttgttgacctaactttctcttataaataagat 66  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  41450931 tacatcaacttttgtttacttaattttctcttataaataagat 41450889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 44498243 - 44498185
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || ||||||||||    
T  44498243 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 4245665 - 4245714
Alignment:
Q  31 acttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  4245665 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 8587244 - 8587301
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||| |||||  || |||||||||||||||||| || ||| |||||    
T  8587244 agatacatcaacttttattgactcaagtttctcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 12343196 - 12343155
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  12343196 agatacatcaacttttgttgaccaaaaattctcttataaata 12343155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 13578931 - 13578972
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  13578931 agatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 15888408 - 15888367
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  15888408 agatacatcaacttttgttgacccaaaattctcttataaata 15888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 15888414 - 15888467
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||| | || ||||||  |||||||||||||||| |||||||||||||||    
T  15888414 aaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaata 15888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 25601056 - 25600999
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||| |||||||||||||| ||  |||||||||||||| || || |||||||||    
T  25601056 agatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 32211425 - 32211478
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  | |||||||||||||| |||||||||||||||    
T  32211425 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 32211478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 39571265 - 39571318
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  ||||||||||| |||| |||||||||||||||    
T  39571265 aaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaata 39571318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 3304334 - 3304278
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||    
T  3304334 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 17006983 - 17007027
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaataa 63  Q
    |||||||||||||||||| |||||  || ||||||||||||||||    
T  17006983 tcagatacatcaacttttattgactaaaatttctcttataaataa 17007027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 17570264 - 17570220
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaataa 63  Q
    |||||||||||||||||| |||||  || ||||||||||||||||    
T  17570264 tcagatacatcaacttttattgactaaaatttctcttataaataa 17570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 1e-57; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 238 - 439
Target Start/End: Original strand, 17181794 - 17181995
Alignment:
Q  238 tacaaacctcagtctgaagtttttgattctgagcttgaagtgcatcattatcagccttaatagtatcatattgtcttttaagaacatcatagtctttctc 337  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||| ||    
T  17181794 tacaaacctcagcttgaagtttttggttctgagcttgaagtgcatcattatctaacttaatagcatcatattgtcttttaagaacatcatagtctttttc 17181893  T
Q  338 taactgttttgtcttccacctagcccttctgttttgaaaccatatagcaatctgtcttggctgcaatccaagagctcttgctagctgcattttcctcaca 437  Q
     ||||| ||||||||||| || |||||||| |||||||||||||||||||  ||||| || |||||   |||||||||||| ||||||||||||||| ||    
T  17181894 caactgctttgtcttccatcttgcccttctattttgaaaccatatagcaacttgtctaggttgcaagttaagagctcttgcaagctgcattttcctctca 17181993  T
Q  438 gg 439  Q
    ||    
T  17181994 gg 17181995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 36595832 - 36595786
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaataaga 65  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  36595832 tcagatacatcaatttttgttgacctaactttctcttataaataaga 36595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 26350412 - 26350480
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  26350412 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 36563600 - 36563671
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| ||||| ||| |||||||    
T  36563600 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 13033125 - 13033183
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||    
T  13033125 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 11795236 - 11795168
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| ||||| ||| ||||    
T  11795236 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 4444028 - 4443957
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||  | ||||||  |||||||||||||||| ||||||||||||||| || |||||| |||||||    
T  4444028 aaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtattt 4443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 35584437 - 35584488
Alignment:
Q  11 aattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||||| |||||||||||||||||||  || |||||||||||||||    
T  35584437 aattcagttcaggtacatcaacttttgttgactcaattttctcttataaata 35584488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 41989463 - 41989404
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  41989463 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 5174893 - 5174835
Alignment:
Q  18 ttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagt 76  Q
    |||||||| ||||||||||||||| |||| | ||||||||||||| |||||||| ||||    
T  5174893 ttcagatatatcaacttttgttgatctaaatgtctcttataaatatgatcgaagtgagt 5174835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 9395424 - 9395482
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  9395424 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 13103098 - 13103156
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  13103098 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 16762997 - 16763051
Alignment:
Q  355 acctagcccttctgttttgaaaccatatagcaatctgtcttggctgcaatccaag 409  Q
    |||| ||||||||||||||||||||||||||||  |||||||| ||||| |||||    
T  16762997 accttgcccttctgttttgaaaccatatagcaacttgtcttggttgcaaaccaag 16763051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 37149017 - 37149087
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  37149017 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 4444034 - 4444087
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaaggga 74  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||| || |||||    
T  4444034 agatacatcaacttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9395418 - 9395365
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  9395418 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 9395365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 13033119 - 13033066
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  13033119 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 13033066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 13103092 - 13103039
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  13103092 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 13103039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 17025698 - 17025755
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  17025698 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 23360010 - 23359957
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  23360010 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 23359957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 36563594 - 36563537
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  36563594 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 6126898 - 6126954
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  6126898 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 17025692 - 17025621
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||| | ||||||  |||||||| ||||||| ||||||||||||||| || || ||| |||||||    
T  17025692 aaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtattt 17025621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 583057 - 582987
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||| ||||||||||| ||||||||||||||| || || ||| ||||||    
T  583057 aaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 3346946 - 3346896
Alignment:
Q  24 tacatcaacttttgttgacctaactttctcttataaata-agatcgaaggg 73  Q
    |||||||||||||||||||  |||||||||||||| ||| |||||||||||    
T  3346946 tacatcaacttttgttgacgaaactttctcttatatatagagatcgaaggg 3346896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 20848142 - 20848072
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||| ||||||||| ||||||||||||||| || || ||| ||||||    
T  20848142 aaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 11795242 - 11795283
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  11795242 agatacatcaacttttgttgacccaaaattctcttataaata 11795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 21576020 - 21576077
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||| | ||  |||||||||||||| || || |||||||||    
T  21576020 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 23360016 - 23360057
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  23360016 agatacatcaacttttgttgacccaaaattctcttataaata 23360057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 27081016 - 27081061
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcg 68  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  27081016 atacatcaacttttgttgacctaaatgtctcttgtaaataggatcg 27081061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 37642028 - 37642085
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || |||||||||    
T  37642028 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 38361753 - 38361822
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  |||||| ||||||||| ||| ||||||||||| ||||| ||| |||||    
T  38361753 aaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 41989469 - 41989522
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||| |||||    
T  41989469 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaata 41989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 37149011 - 37148955
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||| ||||||||| || || ||||||||    
T  37149011 agatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 11897122 - 11897053
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||    
T  11897122 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16448161 - 16448239
Alignment:
Q  1 atctggtt-aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| || || |||||||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21537938 - 21538001
Alignment:
Q  16 agttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||| || |||||||    
T  21537938 agttcagatacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 11897129 - 11897188
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 81  Q
    |||||||||||||||||||||| || ||||||||||||||| || || ||||||||||||    
T  11897129 gatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatttg 11897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 30800497 - 30800556
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||| ||| ||| ||||| | ||||||||||||||||||||||    
T  30800497 tcagatacatcaacttttgttaacccaacgttctcatgtaaataagatcgaagggagtat 30800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 47588393 - 47588335
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| | |||||||||||||    
T  47588393 agatacatcaacttttgttgacccaaaattctcttataaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 17556827 - 17556884
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| || ||||||||||||||| || || |||||||||    
T  17556827 agatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 47588399 - 47588455
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataaga 65  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||    
T  47588399 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataaga 47588455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 14984911 - 14984969
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  14984911 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 17556821 - 17556767
Alignment:
Q  9 aaaattcagttcagatacatc-aacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||||||||||||||||||||    
T  17556821 aaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaata 17556767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 26471127 - 26471197
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  26471127 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 27159420 - 27159490
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  27159420 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 44668155 - 44668225
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  44668155 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9981715 - 9981662
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  9981715 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 9981662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 14984905 - 14984852
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  14984905 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 14984852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 25694393 - 25694450
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  25694393 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 31842857 - 31842910
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  31842857 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 31842910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37552218 - 37552141
Alignment:
Q  1 atctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||||| |||||| ||||||||| |||| ||||||||  |||||| ||||||||||| || || ||||||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 39402028 - 39402081
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  39402028 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 39402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 44955262 - 44955221
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  44955262 agatacatcaacttttgttgacctaaaattctcttataaata 44955221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 47216761 - 47216814
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  47216761 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 47216814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 47777543 - 47777596
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  47777543 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 47777596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 11796007 - 11796063
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  11796007 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 12483682 - 12483626
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 27159414 - 27159358
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  27159414 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 31842851 - 31842795
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  31842851 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 39402022 - 39401966
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  39402022 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 44668149 - 44668093
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  44668149 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 47777537 - 47777481
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  47777537 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 1050962 - 1051021
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| || || |||||||||||    
T  1050962 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtattt 1051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 11796001 - 11795930
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || || |||  |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  11796001 aaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 12213550 - 12213605
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||| || ||||||||||||||| |||||||||||||||||  | |||||||||    
T  12213550 atacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 34042770 - 34042829
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  ||||||||||||||  | || |||||||||||    
T  34042770 agatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 9981721 - 9981779
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||| ||||    
T  9981721 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggaatatt 9981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 11989825 - 11989791
Alignment:
Q  33 ttttgttgacctaactttctcttataaataagatc 67  Q
    ||||||||||| |||||||||||||||||||||||    
T  11989825 ttttgttgacccaactttctcttataaataagatc 11989791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 12483690 - 12483760
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||  | ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  12483690 aaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 1050956 - 1050903
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || || |||  |||||||||||||||| |||||||||||||||    
T  1050956 aaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaata 1050903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 11774581 - 11774536
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctct 54  Q
    ||||||||||| |  |||||||| ||||||||||||||||||||||    
T  11774581 aaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 12043658 - 12043609
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagg 72  Q
    |||||||||||||||||||| ||| | ||| ||||||||| |||||||||    
T  12043658 atacatcaacttttgttgacttaaatatcttttataaataggatcgaagg 12043609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23278063 - 23278116
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  | |||||||||||||| |||||||||||||||    
T  23278063 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 23278116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 34042764 - 34042711
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  | |||||||||||||| |||||||||||||||    
T  34042764 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 34042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 44955268 - 44955321
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| ||| |||||||||||    
T  44955268 aaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaata 44955321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 47216755 - 47216714
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  47216755 agatacatcaacttttgttgacccaaaattctcttataaata 47216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 5392222 - 5392278
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||||||| ||||||||| ||||||||||| ||  || ||||| |||||||    
T  5392222 atacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 26471121 - 26471065
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||| | ||  |||||||||||||| || || ||||||||    
T  26471121 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7269458 - 7269535
Alignment:
Q  1 atctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||| |||||| |||||||||||||| || ||||||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 9575483 - 9575539
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||    
T  9575483 agatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 28469536 - 28469480
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  28469536 gatacattaacttttgttgacctaaatgtcttttataaataagatcgaagggagtat 28469480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 36033284 - 36033237
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaataagat 66  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  36033284 tcagatacatcaacttttgttgacctaaatttatcttataaataagat 36033237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7661129 - 7661075
Alignment:
Q  24 tacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||| ||||| ||| ||||||||||||||| |||||||||||||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22285767 - 22285697
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||||||||||    
T  22285767 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 36583469 - 36583527
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||    
T  36583469 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 7482293 - 7482240
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||||||||||    
T  7482293 aaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaata 7482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 94374 - 94318
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||    
T  94374 agatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 36016258 - 36016326
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||||||||    
T  36016258 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 46840928 - 46840856
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 81  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||||    
T  46840928 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 46840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 1565791 - 1565862
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  1565791 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 1738503 - 1738445
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  1738503 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 1738509 - 1738579
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  1738509 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 7240817 - 7240747
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  7240817 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 7240823 - 7240881
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  7240823 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 7482299 - 7482357
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  7482299 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 1565785 - 1565728
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  ||||||||||||||  | ||||||||||||    
T  1565785 agatacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9268824 - 9268771
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  9268824 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 9268771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 9268830 - 9268887
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  9268830 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23314201 - 23314254
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  23314201 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 23314254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 31319461 - 31319514
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  31319461 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 31319514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 38063975 - 38064028
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  38063975 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 38064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 38441528 - 38441475
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| ||||||  |||||||||||| ||| |||||||||||||||    
T  38441528 aaaattcagttcaaatacattcacttttgttgacataaatttctcttataaata 38441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 14706762 - 14706698
Alignment:
Q  11 aattcagttcagatacatcaacttttgttgacctaa-ctttctcttataaataagatcgaaggga 74  Q
    |||||| |||||||||||||||||||||| ||||||  ||| |||||||||||||| | ||||||    
T  14706762 aattcaattcagatacatcaacttttgttaacctaatttttttcttataaataagacctaaggga 14706698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 22285773 - 22285829
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  22285773 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 46840934 - 46840990
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  46840934 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 7269462 - 7269420
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||    
T  7269462 cagatgcatcaacttttgttaacccaactttctcttataaata 7269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 38063969 - 38063911
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || |  ||||||||||    
T  38063969 agatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 94380 - 94433
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||| || || ||||||  |||||||||||||||| |||||||||||||||    
T  94380 aaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaata 94433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 28536813 - 28536866
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||| | || ||||||  |||||||||||||||| |||||||||||||||    
T  28536813 aaaattcattccaaatacattcacttttgttgacctaaatttctcttataaata 28536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31319455 - 31319414
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  31319455 agatacatcaacttttgttgacccaaaattctcttataaata 31319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 33418450 - 33418491
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  33418450 agatacatcaacttttgttgacccaaaattctcttataaata 33418491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 36016252 - 36016211
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  36016252 agatacatcaacttttgttgacccaaaattctcttataaata 36016211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 36583463 - 36583410
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||| ||| || ||||||  |||||||||||||||| |||||||||||||||    
T  36583463 aaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaata 36583410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 38441534 - 38441575
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  38441534 agatacatcaacttttgttgacccaaaattctcttataaata 38441575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 23314195 - 23314139
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  23314195 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 24098005 - 24097953
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggag 75  Q
    |||||| || |||||||||||||| | | ||||||||| ||||||||||||||    
T  24098005 atacattaaattttgttgacctaattgtttcttataaaaaagatcgaagggag 24097953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 33418444 - 33418392
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaat 61  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||| ||||    
T  33418444 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 46877665 - 46877701
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttata 58  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  46877665 gatacattaacttttgttgacccaactttctcttata 46877701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 7597039 - 7597108
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||| | |||||||||    
T  7597039 aaaattcagttcggatacatcaacttttgttaacacaactttctcttataaataagattggagggagtat 7597108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 3788113 - 3788168
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  3788113 atacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 13853655 - 13853725
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || |||||| ||||||    
T  13853655 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 385
Target Start/End: Original strand, 3353607 - 3353728
Alignment:
Q  264 ttctgagcttgaagtgcatcattatcagccttaatagtatcatattgtcttttaagaacatcatagtctttctctaactgttttgtcttccacctagccc 363  Q
    |||||||| | ||||| || |||||||||||||| || |||| ||||| | |||||||| ||||| |||||||| |  || || || |||||||| || |    
T  3353607 ttctgagccttaagtgtattattatcagccttaagagaatcaaattgtttcttaagaacttcatattctttctcaagttgcttagttttccaccttgctc 3353706  T
Q  364 ttctgttttgaaaccatatagc 385  Q
    |||| ||||| |||||||||||    
T  3353707 ttctattttggaaccatatagc 3353728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 8417849 - 8417793
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || |||||||||||    
T  8417849 agatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 8099604 - 8099663
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  8099604 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 9644770 - 9644829
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  9644770 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 9650787 - 9650846
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  9650787 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8383031 - 8383101
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  8383031 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8417855 - 8417925
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||| | || ||||||  |||||||||||||||| |||||||||||||||||| |  ||||||||||    
T  8417855 aaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 14236697 - 14236755
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||| | ||||| ||||    
T  14236697 agatacatcaacttttgttgactcaactttctcttataaacaagattggagggaatatt 14236755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 26602397 - 26602455
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  26602397 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 33052856 - 33052926
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  33052856 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 2830403 - 2830350
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  2830403 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 2830350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 6143622 - 6143553
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||| | || ||||||  |||||||||||||||| ||||||||||||||| ||||| ||| |||||    
T  6143622 aaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 6330183 - 6330130
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  6330183 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 6330130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 6330189 - 6330246
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  6330189 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 11572201 - 11572144
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  11572201 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 11572207 - 11572260
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  11572207 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 11572260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 13853649 - 13853592
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  13853649 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 24735609 - 24735560
Alignment:
Q  232 ttacaatacaaacctcagtctgaagtttttgattctgagcttgaagtgca 281  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||    
T  24735609 ttacaatacaaacttcagtctgaagtttttggttatgagcttgatgtgca 24735560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 26602391 - 26602338
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  26602391 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 26602338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 28747190 - 28747133
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||  |||||||||||    
T  28747190 agatacatcaacttttgttgacccaaaattctcttataaataggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 2830409 - 2830465
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  2830409 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 8383025 - 8382969
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  8383025 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 3788075 - 3788034
Alignment:
Q  38 ttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||| |||||||||||||||||| ||||| ||||||||||    
T  3788075 ttgacccaactttctcttataaataggatcgtagggagtatt 3788034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 6068640 - 6068697
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||  ||  |||||||||||||| || || |||||||||    
T  6068640 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 8099598 - 8099545
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||| | || ||||||  |||||||||||||||| |||||||||||||||    
T  8099598 aaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaata 8099545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 13043826 - 13043773
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||| |||| ||||||  | |||||||||||||| |||||||||||||||    
T  13043826 aaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaata 13043773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 35031063 - 35031116
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| ||| |||||||||||    
T  35031063 aaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaata 35031116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 17992062 - 17992118
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||| | ||||||||||| ||  |||||||||||||| || |||||||||||    
T  17992062 agatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 28747196 - 28747248
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaat 61  Q
    |||||||||| || ||||||  ||||||||||| |||| ||||||||||||||    
T  28747196 aaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 33052850 - 33052790
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 81  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || | ||||||||||    
T  33052850 agatacatcaacttttattgacccaaaattctcttataaataggaccggatggagtatttg 33052790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 17344281 - 17344228
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  17344281 aaaattcagttcagatacatcaacttttgttgatttaactttctcttataaata 17344228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1716376 - 1716301
Alignment:
Q  1 atctggttaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||  | ||||||||||||||||||||||||| || | |||||||||||||||| || ||||||||    
T  1716376 atctggttaaaattg-gatcagatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 43900617 - 43900546
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || |||||||||||    
T  43900617 aaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17344288 - 17344346
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||||||||||||| | || ||||||||||||||||||| | |||||||||||    
T  17344288 gatacatcaacttttgttgatccaaatttctcttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 3993050 - 3993107
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||| || |||||||||    
T  3993050 agatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 42797806 - 42797862
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||||||  |||||||||||||| || || ||||||||    
T  42797806 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 41469828 - 41469899
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||| ||||||||| || |||||| |||||||    
T  41469828 aaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50430471 - 50430534
Alignment:
Q  1 atctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttctcttataaataa 63  Q
    |||||||||||| |||| | || ||||||||||||||||||||| ||||| |||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaataa 50430534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 3372189 - 3372119
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  3372189 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 3422134 - 3422192
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  3422134 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 4780367 - 4780425
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| |||||||||||||| || ||||||||||||||| || || ||||||||    
T  4780367 tcagatacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 41469822 - 41469764
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  41469822 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 41615738 - 41615796
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatc 67  Q
    |||||| ||| || |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  41615738 aaaattaagtccaaatacattaacttttgttgacctaattttctcttataaataggatc 41615796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 47833679 - 47833609
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  47833679 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 47838673 - 47838615
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  47838673 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 48336331 - 48336261
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  48336331 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 20538748 - 20538801
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  20538748 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 20538801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 24704438 - 24704385
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  24704438 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 24704385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 24704444 - 24704501
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||| |||||||||||||| ||  |||||||||||||| ||||| |||||||||    
T  24704444 agatacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 29845713 - 29845644
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||| ||| || || |||||||||||||| |||||||||||| || ||  |||||||||||    
T  29845713 aaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 29845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 33621864 - 33621811
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  33621864 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 33621811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 40913251 - 40913320
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  ||||||||||| |||| ||||||||||||||| || || |||||||||    
T  40913251 aaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 46797793 - 46797740
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  46797793 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 46797740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 47838679 - 47838748
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  ||||||||||||| || ||||||||||||||| ||||| ||| |||||    
T  47838679 aaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 51894639 - 51894582
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  51894639 cagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 52756749 - 52756806
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||| ||||||||| || ||||||||||||    
T  52756749 agatacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 53337438 - 53337385
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  53337438 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 53337385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 6121949 - 6121893
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  6121949 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 47833685 - 47833741
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  47833685 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 38160430 - 38160387
Alignment:
Q  19 tcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| |||||||||||||| | |||||||||||||    
T  38160430 tcagatacatcaatttttgttgacctaaatctctcttataaata 38160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 41594708 - 41594673
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttata 58  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 3993044 - 3992974
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  ||||||||||||| || ||||||||||||||| || || ||| ||||||    
T  3993044 aaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 33621870 - 33621928
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  33621870 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 42797800 - 42797730
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||| ||| || || ||| ||||||    
T  42797800 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 48336337 - 48336395
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  48336337 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 3422128 - 3422076
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| ||||||  | |||||||||||||| |||||||||||||||    
T  3422128 aaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaata 3422076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 3904745 - 3904798
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| ||||| |||||||||    
T  3904745 aaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaata 3904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 5986944 - 5986891
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||  |||||||||||||||    
T  5986944 aaaattcagtccaaatacattcacttttgttgacctatatttctcttataaata 5986891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 6121955 - 6122008
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  ||||||||||| |||| |||||||||||||||    
T  6121955 aaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaata 6122008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 7579384 - 7579425
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  7579384 agatacatcaacttttgttgacccaaaattctcttataaata 7579425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 25855151 - 25855098
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || |||||| |||||||||||||  |||||||||| |||||||    
T  25855151 aaaattcagtccaaatacattaacttttgttgactcaactttctctcataaata 25855098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 26231645 - 26231592
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||   ||||||||||||||| |||||||||||||||    
T  26231645 aaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaata 26231592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 33551269 - 33551216
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||  | ||||||  |||||||||||||||| |||||||||||||||    
T  33551269 aaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaata 33551216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 52756743 - 52756690
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||| ||||||||||| |||||||||||||||    
T  52756743 aaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaata 52756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 53337444 - 53337501
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||| |||||| ||  |||||||||||||| || || |||||||||    
T  53337444 agatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 3372195 - 3372251
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||    
T  3372195 agatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 5986952 - 5987008
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||| ||  |||||||||||||| || || || |||||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 20538742 - 20538686
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||| ||||||||||| ||  |||||||||||||| || || ||||||||    
T  20538742 agatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23226058 - 23226014
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttataaataagat 66  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||    
T  23226058 gatacatcaatttttgttgatctaaatatctcttataaataagat 23226014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 46797799 - 46797855
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  46797799 agatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 9111556 - 9111628
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttg 81  Q
    ||||||||||||| ||||||  |||||||||||||||| ||||||||||||||| || |||||| ||||||||    
T  9111556 aaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatttg 9111628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 33942994 - 33943063
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || |||||| ||||||||||||||||||||||| ||||||||| ||||| | |||||||    
T  33942994 aaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcggaaggagtat 33943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 35513541 - 35513473
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || |||||||||||    
T  35513541 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 8817448 - 8817519
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || |||||| |||||||    
T  8817448 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 8817519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 9027197 - 9027139
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||||||||||||||| |||||| ||||||||||| || || |||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 46208098 - 46208029
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || |||||||||    
T  46208098 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 46208104 - 46208161
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||||||  |||||||||||||| || || |||||||||    
T  46208104 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 17653780 - 17653712
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||||||||    
T  17653780 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 21295382 - 21295326
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||||||  |||||||||||||| || || ||||||||    
T  21295382 agatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 37508989 - 37508921
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||||||||    
T  37508989 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 51406741 - 51406685
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataaga 65  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||    
T  51406741 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataaga 51406685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 10298053 - 10298112
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  10298053 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 33942988 - 33942941
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcg 68  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||    
T  33942988 agatacatcaacttttgttgacccaagtttctcttataaataggatcg 33942941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 40691052 - 40690993
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  40691052 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42170399 - 42170478
Alignment:
Q  1 atctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||||| |||| | || ||||||  |||||||||||||||| |||||||||||||||||| || ||| ||||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 44785458 - 44785529
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  44785458 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 4238662 - 4238592
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  4238662 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 21295388 - 21295458
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  21295388 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22721999 - 22721929
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  22721999 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 34080092 - 34080162
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  34080092 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 2787894 - 2787947
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  2787894 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 2787947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 10298047 - 10297994
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  10298047 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 10297994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19557114 - 19557167
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  19557114 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 19557167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 36095742 - 36095811
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||| || ||||||  |||||||||||||||| ||| ||||||||||| || || |||||||||    
T  36095742 aaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 49823437 - 49823380
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  49823437 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 49823443 - 49823496
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  49823443 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 49823496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 6013398 - 6013450
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaat 61  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||    
T  6013398 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 6013450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 19557108 - 19557052
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  19557108 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 26019537 - 26019477
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||| |||||| ||||||| || ||||||||||||||| ||||| | |||||||||    
T  26019537 cagatacataaactttggttgaccaaattttctcttataaataggatcggaaggagtattt 26019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 34080086 - 34080030
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 38964466 - 38964522
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  38964466 agatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 427
Target Start/End: Original strand, 42087505 - 42087569
Alignment:
Q  363 cttctgttttgaaaccatatagcaatctgtcttggctgcaatccaagagctcttgctagctgcat 427  Q
    |||||||| ||||||||||||||||  ||||| |||||||| |||||| ||||||| || |||||    
T  42087505 cttctgttctgaaaccatatagcaacttgtctaggctgcaaaccaagatctcttgcaagttgcat 42087569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 48340471 - 48340527
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  48340471 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 17653786 - 17653845
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||| |||||||    
T  17653786 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 17653845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 29285842 - 29285881
Alignment:
Q  31 acttttgttgacctaactttctcttataaataagatcgaa 70  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  29285842 acttttgttgacctaaatttatcttataaataagatcgaa 29285881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 8437493 - 8437423
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||| ||||||||| ||||||||||||||| || || ||| ||||||    
T  8437493 aaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 8817442 - 8817384
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || | ||||||||    
T  8817442 agatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 14848314 - 14848276
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttata 58  Q
    |||||||||||||||||||||||| || |||||||||||    
T  14848314 cagatacatcaacttttgttgacccaattttctcttata 14848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 34988132 - 34988074
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||| ||||||||||||||||| || | ||||| ||||||| || ||||||||||||    
T  34988132 cagatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 38964460 - 38964390
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  ||||||||||| |||| ||||||||||||||| || || ||| ||||||    
T  38964460 aaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 42170403 - 42170361
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||||||||||||||||| ||  ||||||||||||||    
T  42170403 cagatacatcaacttttgttgacccaaaattctcttataaata 42170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 42299651 - 42299697
Alignment:
Q  33 ttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||| | |||||||||||||||||| ||||| ||||||||||    
T  42299651 ttttgttgatccaactttctcttataaatacgatcggagggagtatt 42299697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 42507417 - 42507487
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||| ||||||||| || || ||| ||||||    
T  42507417 aaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 43323114 - 43323064
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaaggg 73  Q
    ||||||||||||||||||||| || ||| ||||||||||| ||| ||||||    
T  43323114 atacatcaacttttgttgacccaattttttcttataaataggatggaaggg 43323064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 4238668 - 4238709
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  4238668 agatacatcaacttttgttgaccaaaaattctcttataaata 4238709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 8437499 - 8437556
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||  ||  |||||||||||||| || || |||||||||    
T  8437499 agatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 9111550 - 9111509
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  9111550 agatacatcaacttttgttgacccaaaattctcttataaata 9111509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 9190145 - 9190178
Alignment:
Q  45 aactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||||| |||||||||||||||    
T  9190145 aactttctcttataaataggatcgaagggagtat 9190178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 22722005 - 22722046
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  22722005 agatacatcaacttttgttgacccaaaattctcttataaata 22722046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 37508995 - 37509036
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  37508995 agatacatcaacttttgttgacccaaaattctcttataaata 37509036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 40691058 - 40691111
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  ||||||||| |||||| |||||||||||||||    
T  40691058 aaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaata 40691111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 42507411 - 42507370
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  42507411 agatacatcaacttttgttgacccaaaattctcttataaata 42507370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 44785452 - 44785411
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  44785452 agatacatcaacttttgttgacccaaaattctcttataaata 44785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 48340465 - 48340412
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||| ||||||    
T  48340465 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaata 48340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 51406747 - 51406804
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||| ||||||||||| ||  |||||||||||||| || || |||||||||    
T  51406747 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 2787888 - 2787832
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||| ||||| ||  |||||||||||||| || || ||||||||    
T  2787888 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 9213573 - 9213513
Alignment:
Q  20 cagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||||||||||||||||  || | ||| ||||||||| || || |||||||||||    
T  9213573 cagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 26001121 - 26001065
Alignment:
Q  22 gatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||| |||||||||| |||||| |  ||||| |||||||||||||| ||||||||||    
T  26001121 gatatatcaacttttattgacccagatttctattataaataagatcaaagggagtat 26001065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 33128260 - 33128224
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataa 59  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  33128260 atacattaacttttgttgacctaaatttctcttataa 33128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 16734851 - 16734802
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttata 58  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  16734851 aaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 41492952 - 41492894
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| || ||||||||||||||| || || ||||||||||    
T  41492952 agatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 3055632 - 3055693
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttga 82  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||||    
T  3055632 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttga 3055693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 12170453 - 12170408
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcg 68  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  12170453 atacatcaacttttgttgacccaagtttctcttataaataagatcg 12170408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 16044379 - 16044432
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||||||||||    
T  16044379 aaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaata 16044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 37666672 - 37666725
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||||||||||    
T  37666672 aaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaata 37666725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 36688952 - 36688897
Alignment:
Q  7 ttaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||||   |||||||||||| |||||||||| ||||||||||||||||||    
T  36688952 ttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaata 36688897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 37990069 - 37990010
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||||    
T  37990069 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 37990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 41478701 - 41478772
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  41478701 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 6648575 - 6648517
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  6648575 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 9047811 - 9047753
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  9047811 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 15372294 - 15372224
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| ||  | ||||||||||    
T  15372294 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 37990075 - 37990145
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  37990075 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 41478695 - 41478637
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||||    
T  41478695 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 3055626 - 3055573
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  3055626 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 3055573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 4683994 - 4684047
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  4683994 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 4684047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 13197772 - 13197825
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  13197772 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 13197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 15896910 - 15896857
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  15896910 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 15896857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 38917578 - 38917521
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  38917578 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 44397615 - 44397562
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  44397615 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 44397562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 44398754 - 44398701
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  44398754 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 44398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 44398760 - 44398817
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || |||||||||    
T  44398760 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 12337993 - 12337937
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  12337993 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 13197766 - 13197710
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  13197766 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 15372300 - 15372356
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 15896916 - 15896972
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  15896916 agatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 31150721 - 31150653
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||| ||| || |||||| |||||||||||||  |||||||||||||||||| ||||| || |||||    
T  31150721 aaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 31726844 - 31726809
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctctta 56  Q
    |||||||||||||||||||||||||||||| |||||    
T  31726844 agatacatcaacttttgttgacctaactttatctta 31726809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 16243839 - 16243781
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  |||||||||||||| || || | ||||||||    
T  16243839 agatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 30852682 - 30852748
Alignment:
Q  12 attcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||  |||||||| ||||||| || | |||||||||||||||||||| || || |||||||||    
T  30852682 attcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 37666666 - 37666608
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| || || ||||||||||    
T  37666666 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 4553072 - 4553125
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||| | || ||||||| | ||||||||||| ||||||||||||||||||    
T  4553072 aaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 9047817 - 9047870
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||| ||||||||| |||||||||||||||    
T  9047817 aaaattcagtccaaatacattcactttttttgacctaaatttctcttataaata 9047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 13344552 - 13344499
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  | |||||||||||||| |||||||||||||||    
T  13344552 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 13344499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 13344558 - 13344615
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||| | ||  |||||||||||||| || || |||||||||    
T  13344558 agatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 16243845 - 16243898
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| ||| |||||||||||    
T  16243845 aaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaata 16243898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 30099238 - 30099181
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||||||||||||| ||  |||||| ||||||| || || |||||||||    
T  30099238 agatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 44397621 - 44397662
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  44397621 agatacatcaacttttgttgacccaaaattctcttataaata 44397662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 16044373 - 16044317
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| || || ||||||||    
T  16044373 agatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 23227348 - 23227404
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||| || | ||||||||||||| ||  ||||| ||||||    
T  23227348 atacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 231365 - 231433
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    |||||||||| ||||||||| |||||||||||| | ||||||||||||||| || ||||| ||||||||    
T  231365 aaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 231353 - 231294
Alignment:
Q  27 atcaacttttgttgacctaactttctcttataaataagatcgaagggagtatttgacatc 86  Q
    ||||||||||||||||||||  ||||| |||||||| || || |||||||||||||||||    
T  231353 atcaacttttgttgacctaatattctcctataaataggaccggagggagtatttgacatc 231294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 49573 - 49502
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtattt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| |||||||    
T  49573 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 49502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 49581 - 49635
Alignment:
Q  23 atacatcaacttttgttgacctaactttctcttataaataagatcgaagggagta 77  Q
    ||||||||||||||||||||| ||  |||||||||||||| || || ||||||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 12928 - 12858
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  12928 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 12934 - 12992
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||| ||||| ||  |||||||||||||| || || ||||||||||    
T  12934 agatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 23853 - 23783
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    |||||||||| || ||||||  |||||||||||||||| ||||||||||||||| || || ||| ||||||    
T  23853 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 23859 - 23917
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  23859 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 1403 - 1350
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  1403 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 1409 - 1450
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaata 62  Q
    ||||||||||||||||||||||| ||  ||||||||||||||    
T  1409 agatacatcaacttttgttgacccaaaattctcttataaata 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 6193 - 6246
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaata 62  Q
    |||||||||| || ||||||  |||||||||||||||| |||||||||||||||    
T  6193 aaaattcagtccacatacattcacttttgttgacctaaatttctcttataaata 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 6187 - 6129
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtatt 79  Q
    ||||||||||||||||||||||| ||  || ||||||||||| || || ||||||||||    
T  6187 agatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 13788 - 13857
Alignment:
Q  9 aaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    ||||||||||||| ||| || || |||||||||||||| |||||||||||| || ||  |||||||||||    
T  13788 aaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 13857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 53397 - 53340
Alignment:
Q  21 agatacatcaacttttgttgacctaactttctcttataaataagatcgaagggagtat 78  Q
    |||||||||||||||||||  || |||||||| ||||||||||||||| | |||||||    
T  53397 agatacatcaacttttgttatccaaactttcttttataaataagatcggatggagtat 53340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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