View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12419_high_13 (Length: 452)

Name: NF12419_high_13
Description: NF12419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12419_high_13
NF12419_high_13
[»] chr7 (47 HSPs)
chr7 (12-223)||(9625111-9625320)
chr7 (223-415)||(9623168-9623361)
chr7 (224-388)||(42515533-42515697)
chr7 (224-382)||(6719067-6719225)
chr7 (224-372)||(2941750-2941899)
chr7 (224-372)||(9124963-9125112)
chr7 (224-372)||(42515096-42515245)
chr7 (224-370)||(13125129-13125276)
chr7 (224-372)||(28495858-28496007)
chr7 (224-382)||(2193251-2193409)
chr7 (228-372)||(11517386-11517530)
chr7 (224-382)||(34405584-34405742)
chr7 (224-337)||(2465772-2465886)
chr7 (223-368)||(35474113-35474259)
chr7 (224-372)||(2611645-2611794)
chr7 (224-368)||(36422260-36422405)
chr7 (224-371)||(28495601-28495749)
chr7 (224-332)||(2465968-2466077)
chr7 (224-372)||(6747591-6747740)
chr7 (224-388)||(46425730-46425894)
chr7 (224-382)||(2189139-2189297)
chr7 (223-372)||(18833290-18833440)
chr7 (223-372)||(25182365-25182515)
chr7 (224-372)||(679821-679969)
chr7 (223-366)||(29357448-29357592)
chr7 (223-352)||(26421752-26421882)
chr7 (241-346)||(31743834-31743940)
chr7 (216-311)||(26421290-26421386)
chr7 (223-388)||(22529227-22529392)
chr7 (223-368)||(36015403-36015549)
chr7 (224-286)||(13122498-13122561)
chr7 (223-388)||(33316716-33316877)
chr7 (227-388)||(35527117-35527278)
chr7 (224-372)||(5406581-5406730)
chr7 (224-311)||(31406577-31406665)
chr7 (262-383)||(29039052-29039172)
chr7 (224-280)||(7646471-7646528)
chr7 (224-310)||(16192385-16192472)
chr7 (223-304)||(7461343-7461424)
chr7 (224-263)||(43776283-43776322)
chr7 (224-277)||(7646514-7646568)
chr7 (276-382)||(26957603-26957708)
chr7 (266-311)||(43233478-43233523)
chr7 (227-326)||(11372501-11372601)
chr7 (229-336)||(20966091-20966199)
chr7 (298-367)||(13124769-13124838)
chr7 (296-336)||(16811912-16811952)
[»] chr4 (56 HSPs)
chr4 (12-223)||(13611926-13612135)
chr4 (223-415)||(13613884-13614077)
chr4 (224-382)||(12691986-12692144)
chr4 (223-388)||(50398979-50399144)
chr4 (224-388)||(50398525-50398689)
chr4 (224-372)||(35871632-35871780)
chr4 (223-372)||(49998640-49998790)
chr4 (224-372)||(44471312-44471461)
chr4 (224-382)||(24629420-24629578)
chr4 (224-372)||(4127876-4128025)
chr4 (224-388)||(51331268-51331432)
chr4 (231-382)||(4127431-4127582)
chr4 (223-382)||(21220317-21220476)
chr4 (224-382)||(23942776-23942934)
chr4 (223-382)||(29628654-29628812)
chr4 (223-388)||(14351784-14351949)
chr4 (228-388)||(9423849-9424009)
chr4 (224-368)||(21067290-21067435)
chr4 (224-382)||(1645736-1645894)
chr4 (224-372)||(31817839-31817988)
chr4 (224-382)||(24628964-24629125)
chr4 (224-310)||(50814812-50814899)
chr4 (234-372)||(14572148-14572286)
chr4 (224-372)||(23350270-23350419)
chr4 (228-327)||(7678613-7678713)
chr4 (224-312)||(44470862-44470950)
chr4 (228-382)||(53996106-53996260)
chr4 (224-312)||(27026567-27026655)
chr4 (224-382)||(3169201-3169359)
chr4 (228-382)||(4185709-4185864)
chr4 (223-372)||(31817384-31817534)
chr4 (224-332)||(14571708-14571817)
chr4 (224-311)||(1464212-1464300)
chr4 (228-311)||(27029342-27029426)
chr4 (224-298)||(15306078-15306153)
chr4 (224-311)||(23943229-23943317)
chr4 (227-309)||(23091501-23091584)
chr4 (262-372)||(8467826-8467936)
chr4 (228-372)||(17029334-17029479)
chr4 (238-383)||(24271552-24271699)
chr4 (219-312)||(17628575-17628669)
chr4 (229-310)||(52048659-52048740)
chr4 (224-307)||(33764929-33765013)
chr4 (224-350)||(21067760-21067884)
chr4 (224-310)||(27578444-27578531)
chr4 (262-389)||(43928989-43929116)
chr4 (273-336)||(53391927-53391990)
chr4 (262-372)||(41869922-41870032)
chr4 (224-312)||(20306151-20306237)
chr4 (266-372)||(17028878-17028984)
chr4 (262-310)||(23976245-23976293)
chr4 (223-309)||(42838690-42838780)
chr4 (229-319)||(4186224-4186315)
chr4 (224-261)||(11828472-11828509)
chr4 (229-313)||(34554492-34554577)
chr4 (224-311)||(27578896-27578984)
[»] chr5 (41 HSPs)
chr5 (223-372)||(3886593-3886743)
chr5 (224-372)||(2473963-2474112)
chr5 (224-382)||(17445448-17445606)
chr5 (227-372)||(189072-189218)
chr5 (219-372)||(22556540-22556694)
chr5 (224-372)||(8642027-8642176)
chr5 (224-382)||(10927396-10927554)
chr5 (224-382)||(34867785-34867943)
chr5 (224-372)||(1821910-1822059)
chr5 (224-383)||(8391315-8391473)
chr5 (224-382)||(10926939-10927097)
chr5 (228-382)||(21886143-21886297)
chr5 (224-368)||(2193824-2193969)
chr5 (224-372)||(2474409-2474558)
chr5 (228-388)||(20039472-20039631)
chr5 (224-382)||(42788639-42788797)
chr5 (219-372)||(22556973-22557127)
chr5 (224-332)||(34371656-34371765)
chr5 (224-332)||(34372112-34372221)
chr5 (224-372)||(3887050-3887199)
chr5 (224-382)||(27646828-27646986)
chr5 (224-372)||(39146943-39147092)
chr5 (224-383)||(30719798-30719957)
chr5 (227-368)||(18304439-18304581)
chr5 (224-382)||(15513005-15513164)
chr5 (224-372)||(30684549-30684698)
chr5 (223-289)||(29680099-29680166)
chr5 (226-311)||(4673466-4673552)
chr5 (224-366)||(24182239-24182381)
chr5 (228-312)||(20858538-20858623)
chr5 (236-327)||(18750201-18750293)
chr5 (224-286)||(11757274-11757337)
chr5 (261-371)||(11160712-11160822)
chr5 (230-310)||(4657992-4658073)
chr5 (296-372)||(22975076-22975152)
chr5 (262-388)||(5066923-5067048)
chr5 (270-383)||(2058696-2058808)
chr5 (262-327)||(42429194-42429259)
chr5 (262-333)||(16370740-16370811)
chr5 (262-372)||(43356652-43356760)
chr5 (224-312)||(32574651-32574740)
[»] scaffold0020 (1 HSPs)
scaffold0020 (224-372)||(107456-107605)
[»] chr3 (40 HSPs)
chr3 (224-372)||(31284269-31284418)
chr3 (224-368)||(28561754-28561899)
chr3 (224-372)||(16811385-16811534)
chr3 (228-368)||(39653172-39653313)
chr3 (224-372)||(41472305-41472453)
chr3 (224-368)||(50347754-50347899)
chr3 (223-364)||(25239069-25239211)
chr3 (224-368)||(11180027-11180172)
chr3 (224-382)||(14813944-14814102)
chr3 (224-333)||(13150547-13150657)
chr3 (223-372)||(39640941-39641091)
chr3 (224-372)||(8067284-8067433)
chr3 (224-372)||(20885110-20885259)
chr3 (224-372)||(25230241-25230390)
chr3 (224-372)||(25237828-25237977)
chr3 (224-372)||(25248115-25248264)
chr3 (224-372)||(27187323-27187472)
chr3 (224-388)||(2911084-2911248)
chr3 (224-368)||(13150092-13150237)
chr3 (224-372)||(30529691-30529840)
chr3 (224-368)||(32227509-32227653)
chr3 (227-372)||(7477195-7477341)
chr3 (227-372)||(7493885-7494031)
chr3 (224-372)||(25230698-25230847)
chr3 (224-372)||(25238285-25238434)
chr3 (224-368)||(32227214-32227359)
chr3 (224-326)||(32386727-32386830)
chr3 (224-312)||(14820218-14820307)
chr3 (224-336)||(25238677-25238790)
chr3 (224-311)||(4067353-4067441)
chr3 (224-382)||(37045030-37045188)
chr3 (223-308)||(25802540-25802626)
chr3 (228-372)||(16810929-16811074)
chr3 (232-388)||(32796936-32797092)
chr3 (224-336)||(29224364-29224477)
chr3 (224-372)||(41474001-41474150)
chr3 (229-310)||(26309987-26310069)
chr3 (224-307)||(25802997-25803081)
chr3 (228-311)||(31103955-31104041)
chr3 (266-308)||(3890046-3890088)
[»] chr1 (41 HSPs)
chr1 (228-372)||(20061188-20061333)
chr1 (224-382)||(20054073-20054231)
chr1 (224-382)||(20054529-20054687)
chr1 (224-382)||(20054985-20055143)
chr1 (224-382)||(20055441-20055599)
chr1 (224-382)||(20055897-20056055)
chr1 (224-382)||(20056353-20056511)
chr1 (224-382)||(20057256-20057414)
chr1 (224-382)||(20845654-20845812)
chr1 (224-382)||(43057516-43057674)
chr1 (223-372)||(50002699-50002849)
chr1 (224-372)||(35759601-35759750)
chr1 (224-372)||(35760907-35761056)
chr1 (231-382)||(50002285-50002436)
chr1 (224-382)||(38340901-38341059)
chr1 (223-372)||(2634928-2635078)
chr1 (224-365)||(20057712-20057854)
chr1 (227-388)||(30872946-30873107)
chr1 (224-382)||(52250201-52250359)
chr1 (224-372)||(16451926-16452075)
chr1 (224-372)||(16461079-16461228)
chr1 (224-382)||(43057058-43057215)
chr1 (224-372)||(46693728-46693878)
chr1 (223-312)||(20056808-20056898)
chr1 (228-312)||(20060337-20060422)
chr1 (223-388)||(12883513-12883678)
chr1 (229-372)||(2328319-2328463)
chr1 (224-326)||(51372867-51372970)
chr1 (225-372)||(31822657-31822805)
chr1 (224-382)||(50003068-50003226)
chr1 (223-365)||(16907245-16907388)
chr1 (227-311)||(12728056-12728142)
chr1 (224-372)||(23180734-23180883)
chr1 (225-398)||(7548070-7548243)
chr1 (224-278)||(52250641-52250696)
chr1 (224-278)||(52250978-52251033)
chr1 (266-382)||(10820587-10820702)
chr1 (228-311)||(16440576-16440660)
chr1 (229-384)||(16410721-16410877)
chr1 (262-383)||(2634459-2634580)
chr1 (244-307)||(31823097-31823161)
[»] chr2 (34 HSPs)
chr2 (224-371)||(30966695-30966843)
chr2 (223-415)||(33174918-33175112)
chr2 (224-372)||(24818330-24818479)
chr2 (224-368)||(16378945-16379090)
chr2 (224-368)||(41754297-41754442)
chr2 (227-382)||(18098874-18099029)
chr2 (224-371)||(30966239-30966387)
chr2 (224-382)||(25434049-25434207)
chr2 (224-368)||(25337990-25338135)
chr2 (224-372)||(29804686-29804835)
chr2 (224-382)||(11388184-11388340)
chr2 (224-372)||(1912529-1912677)
chr2 (223-382)||(16379388-16379547)
chr2 (224-388)||(33174494-33174656)
chr2 (224-372)||(5399810-5399959)
chr2 (224-332)||(8256570-8256679)
chr2 (223-365)||(83028-83171)
chr2 (224-415)||(38898905-38899098)
chr2 (227-312)||(33771065-33771151)
chr2 (262-383)||(1953149-1953269)
chr2 (224-372)||(29259613-29259762)
chr2 (223-365)||(27882918-27883061)
chr2 (224-336)||(11394575-11394686)
chr2 (223-382)||(1707037-1707195)
chr2 (224-372)||(15619902-15620051)
chr2 (224-367)||(30963713-30963857)
chr2 (224-349)||(20502050-20502175)
chr2 (227-311)||(8073957-8074042)
chr2 (266-382)||(18447954-18448069)
chr2 (230-311)||(13191039-13191121)
chr2 (266-312)||(30963299-30963345)
chr2 (224-311)||(30961876-30961964)
chr2 (262-312)||(15639798-15639848)
chr2 (227-264)||(32377712-32377749)
[»] chr8 (40 HSPs)
chr8 (224-382)||(10844878-10845036)
chr8 (224-382)||(22026374-22026532)
chr8 (224-382)||(27925894-27926052)
chr8 (224-372)||(2044062-2044211)
chr8 (223-382)||(41659097-41659256)
chr8 (224-368)||(10844608-10844753)
chr8 (224-368)||(12827247-12827392)
chr8 (224-371)||(17103086-17103234)
chr8 (224-382)||(22548988-22549146)
chr8 (224-382)||(32292392-32292550)
chr8 (224-368)||(22548542-22548687)
chr8 (224-368)||(28453346-28453491)
chr8 (224-372)||(34308472-34308621)
chr8 (224-372)||(8080335-8080484)
chr8 (224-312)||(25144836-25144925)
chr8 (224-336)||(25147576-25147689)
chr8 (224-372)||(27022331-27022480)
chr8 (223-383)||(27819238-27819398)
chr8 (224-372)||(34308928-34309081)
chr8 (215-365)||(28375038-28375189)
chr8 (224-372)||(6464903-6465052)
chr8 (224-366)||(25147977-25148120)
chr8 (224-336)||(12100731-12100844)
chr8 (228-364)||(21316106-21316243)
chr8 (232-372)||(22840530-22840671)
chr8 (224-366)||(33852251-33852394)
chr8 (224-312)||(41913034-41913123)
chr8 (262-366)||(27021911-27022015)
chr8 (224-377)||(3745100-3745254)
chr8 (223-363)||(1297020-1297161)
chr8 (229-336)||(15819014-15819121)
chr8 (228-298)||(31283648-31283719)
chr8 (223-372)||(15567548-15567698)
chr8 (228-311)||(30527479-30527563)
chr8 (227-357)||(3744657-3744788)
chr8 (266-367)||(22705181-22705282)
chr8 (227-287)||(25307855-25307914)
chr8 (262-311)||(30334940-30334989)
chr8 (266-311)||(6466775-6466820)
chr8 (266-311)||(15568041-15568086)
[»] scaffold0018 (1 HSPs)
scaffold0018 (224-372)||(10304-10453)
[»] chr6 (42 HSPs)
chr6 (224-388)||(20896681-20896845)
chr6 (224-370)||(13492795-13492942)
chr6 (224-388)||(6330905-6331069)
chr6 (224-372)||(16519972-16520121)
chr6 (224-372)||(17027524-17027673)
chr6 (224-388)||(17850907-17851071)
chr6 (224-382)||(20850316-20850474)
chr6 (229-382)||(3652481-3652634)
chr6 (230-372)||(7911882-7912025)
chr6 (224-415)||(20126175-20126368)
chr6 (224-372)||(7912314-7912463)
chr6 (224-372)||(9352066-9352215)
chr6 (224-332)||(13191506-13191615)
chr6 (224-312)||(13492396-13492485)
chr6 (224-372)||(17731102-17731255)
chr6 (237-368)||(27334169-27334301)
chr6 (237-368)||(27394909-27395041)
chr6 (224-382)||(2681209-2681367)
chr6 (228-382)||(23986314-23986468)
chr6 (228-381)||(9440306-9440459)
chr6 (223-312)||(15929646-15929736)
chr6 (224-388)||(17851363-17851527)
chr6 (228-368)||(2720560-2720702)
chr6 (243-388)||(31821704-31821849)
chr6 (224-336)||(11062325-11062438)
chr6 (228-312)||(20735759-20735844)
chr6 (224-366)||(21311981-21312124)
chr6 (224-372)||(21311519-21311668)
chr6 (225-368)||(23776449-23776592)
chr6 (224-350)||(2890832-2890959)
chr6 (228-368)||(14771716-14771857)
chr6 (228-312)||(28583027-28583112)
chr6 (227-372)||(28065831-28065980)
chr6 (223-346)||(9440849-9440973)
chr6 (238-312)||(15929263-15929338)
chr6 (236-310)||(17205405-17205479)
chr6 (224-277)||(28780209-28780263)
chr6 (295-372)||(9440493-9440570)
chr6 (229-312)||(1991617-1991701)
chr6 (266-372)||(32292889-32292995)
chr6 (223-327)||(33774994-33775101)
chr6 (228-312)||(20732642-20732727)
[»] scaffold0499 (1 HSPs)
scaffold0499 (224-366)||(2044-2187)
[»] scaffold0322 (1 HSPs)
scaffold0322 (224-372)||(18970-19119)
[»] scaffold0047 (2 HSPs)
scaffold0047 (224-372)||(18128-18276)
scaffold0047 (224-372)||(17591-17740)
[»] scaffold0168 (1 HSPs)
scaffold0168 (224-372)||(2746-2895)
[»] scaffold0024 (1 HSPs)
scaffold0024 (224-372)||(105724-105873)
[»] scaffold0022 (4 HSPs)
scaffold0022 (224-372)||(162671-162820)
scaffold0022 (230-336)||(69814-69921)
scaffold0022 (224-280)||(163167-163224)
scaffold0022 (224-277)||(163127-163181)
[»] scaffold0243 (1 HSPs)
scaffold0243 (224-382)||(1215-1373)
[»] scaffold0040 (1 HSPs)
scaffold0040 (224-372)||(2203-2352)
[»] scaffold0333 (2 HSPs)
scaffold0333 (228-382)||(4556-4710)
scaffold0333 (224-306)||(5091-5174)
[»] scaffold0007 (1 HSPs)
scaffold0007 (262-372)||(142306-142416)
[»] scaffold0002 (1 HSPs)
scaffold0002 (224-368)||(154765-154910)
[»] scaffold0005 (2 HSPs)
scaffold0005 (234-372)||(245090-245228)
scaffold0005 (224-332)||(245559-245668)
[»] scaffold0389 (1 HSPs)
scaffold0389 (224-289)||(13526-13592)
[»] scaffold0664 (1 HSPs)
scaffold0664 (242-366)||(3993-4118)
[»] scaffold0088 (1 HSPs)
scaffold0088 (264-382)||(23668-23785)
[»] scaffold0557 (1 HSPs)
scaffold0557 (227-327)||(2154-2255)
[»] scaffold0391 (1 HSPs)
scaffold0391 (227-320)||(14797-14891)
[»] scaffold0277 (1 HSPs)
scaffold0277 (224-277)||(14695-14749)
[»] scaffold0036 (1 HSPs)
scaffold0036 (236-382)||(26064-26211)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 9625320 - 9625111
Alignment:
Q  12 gagcacagaaacactcactctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcgg 111  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9625320 gagcacagaaacactcact--aacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcgg 9625223  T
Q  112 ttctctagctgaactttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9625222 ttctctagctgaagtttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 9625123  T
Q  212 gtagaattcaga 223  Q
    ||||||||||||    
T  9625122 gtagaattcaga 9625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 223 - 415
Target Start/End: Complemental strand, 9623361 - 9623168
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9623361 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 9623262  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 415  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||  ||||||||||| |||  ||||||||||||||||||||||||||||    
T  9623261 ccatggagtctcatgcatgcacaacctctggatccctctcattcc-attgtgattcggtttatctaaaagttgtcaggtaccactcattatcatg 9623168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 42515697 - 42515533
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  42515697 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagccttccttcaa 42515598  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||||||| | | |||| |||||| ||||||||||||| |||| |||||||||| |||||    
T  42515597 ccatgtagtctcatacctacacggcctcaggatccctctcattctgatg-tgattcggttcgtcta 42515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 6719067 - 6719225
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |    
T  6719067 cacgcttaactctggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttcaa 6719166  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | |||  |||||| |||||||||||||| ||| ||||||||||    
T  6719167 ccatgtagtcccatacctacacagcctcaggatccctctcattccaatg-tgattcggtt 6719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 2941750 - 2941899
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  2941750 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagccttccttcaa 2941849  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | || ||| |||||| ||||||||||||| |||||    
T  2941850 ccatgcagtcccatacctgtacggcctcaggatccctctcattctgatgt 2941899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 9125112 - 9124963
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||  |    
T  9125112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttcctttaa 9125013  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  |||||||| | |||||| |||||  ||| |||||||||||||||    
T  9125012 ccatacagtctcatacctgcacggcctcaagatctctctcattccgatgt 9124963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 42515245 - 42515096
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  42515245 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 42515146  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
     |||| |||||||| | |||||| |||||| |||||||||||||||||||    
T  42515145 tcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgt 42515096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 370
Target Start/End: Original strand, 13125129 - 13125276
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  13125129 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 13125228  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgat 370  Q
    ||||| |||| ||| | |||| | |||||  |||||||||||||||||    
T  13125229 ccatgcagtcccatacctgcagggcctcaagatccctctcattccgat 13125276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 28496007 - 28495858
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | |||| |||||||||||  |||||| |    
T  28496007 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagccttccttcaa 28495908  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | |||| |||||  |||||||||||||||||||    
T  28495907 ccatgtagtcccatacctacacggcctcaagatccctctcattccgatgt 28495858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 2193409 - 2193251
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2193409 cacgcttaactgtggagttcctatgaaatgagctaccgaatagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2193310  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | ||||||  ||||| | ||||||||||||| || ||||||||||    
T  2193309 ccatgcagtcccatacctgcacggtctcaggaaccctctcattccggtg-tgattcggtt 2193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 228 - 372
Target Start/End: Original strand, 11517386 - 11517530
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  11517386 cttaactgcggagttcttatggaatgagctaccgaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttc-accat 11517484  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    | |||| ||| | || ||| |||||| |||||||||||||||||||    
T  11517485 gcagtcccatacctgtacggcctcaggatccctctcattccgatgt 11517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 34405584 - 34405742
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  34405584 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagccttccttcaa 34405683  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | || | ||| || ||||||||||||||| || ||||||||||    
T  34405684 ccatgtagtcccatacctacaaggccttaggatccctctcattccggtg-tgattcggtt 34405742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 224 - 337
Target Start/End: Complemental strand, 2465886 - 2465772
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2465886 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465787  T
Q  323 ccatggagtctcatg 337  Q
    ||||| |||| ||||    
T  2465786 ccatgtagtcccatg 2465772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 223 - 368
Target Start/End: Original strand, 35474113 - 35474259
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || |||  ||||||||||||||||   | ||||     
T  35474113 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagtctttcttca 35474212  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    |||||| |||||||| | | |||||||| || |||||||||||||||    
T  35474213 accatgtagtctcatacctacacgacctaaggatccctctcattccg 35474259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 2611645 - 2611794
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||| ||||| | ||| ||||||||||||||||||  |||||| |    
T  2611645 cacgcttaactatggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagccttccttcca 2611744  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  |||||||| | | || |||||||| | |||||||||||||||||    
T  2611745 ccatatagtctcatacctacatgacctcaggacccctctcattccgatgt 2611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 36422405 - 36422260
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  36422405 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 36422306  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | ||| || |||||||||||||||    
T  36422305 ccatgtagtcccatacctacaaggccttaggatccctctcattccg 36422260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 224 - 371
Target Start/End: Original strand, 28495601 - 28495749
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||   |   |||||||||||||||   |||||| |    
T  28495601 cacgcttaactgtggagttcttatggaatgagctacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataagtcttccttcaa 28495700  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 371  Q
    ||||| |||| ||| | | ||||||||||| ||||||||||||||||||    
T  28495701 ccatgtagtcccatacctacacgacctcaggatccctctcattccgatg 28495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 2466077 - 2465968
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||| ||||||||||  |||||| |    
T  2466077 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagccttccttcaa 2465978  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  2465977 ccatgtagtc 2465968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 6747591 - 6747740
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  6747591 cacgcttaactgtggagtttttatggaataggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 6747690  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| ||| |||| | | |||| |||||| |||||||||||||| ||||    
T  6747691 ccatgtagtatcatacctacacggcctcaggatccctctcattccaatgt 6747740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 46425894 - 46425730
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||  || ||||||||||||||||||  |  ||| |    
T  46425894 cacgcttaactgtggagttcttatggaataagataccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagccttatttcaa 46425795  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||| ||| | | || |  ||||| |||||||||||||||||| |||||||| |||||||    
T  46425794 ccatgtagtcccatacctacatggtctcaggatccctctcattccgatg-tgattcggcttgtcta 46425730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 2189297 - 2189139
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||||  || ||| |    
T  2189297 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagccttctttcaa 2189198  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||  | |||||  |||||| | ||||||||||||| || ||||||||||    
T  2189197 ccatgcagtcccacacctgcacagcctcaggaaccctctcattccggtg-tgattcggtt 2189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 18833440 - 18833290
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||| |||||||  ||| ||     
T  18833440 acacgcttaactgtggagttcttatgtaattagctaccgaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagctttccctca 18833341  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||  ||| | || ||| |||||| | |||||||||||||||||    
T  18833340 accatgcagttccatacctgtacggcctcaggaaccctctcattccgatgt 18833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 25182515 - 25182365
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||| |||||||||| ||||||||| ||||||| ||||||||  |||||| ||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  25182515 acacacttaactgtgaagttcttatggaatgagttaccgaaaataagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 25182416  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||||||| | |||||   ||||| ||| |||||||||||||||    
T  25182415 accatgcagtctcatacttgcacagtctcaggatctctctcattccgatgt 25182365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 679969 - 679821
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||||||||| ||| | ||||||||||||||||  ||||||      
T  679969 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaatatgcatcttgttgatataggtagta-ccaacaattcttataagccttccttcag 679871  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| | || ||| | | ||||||||||| ||||||||||||| |||||    
T  679870 ccatgtactcccatacctacacgacctcaggatccctctcattctgatgt 679821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 366
Target Start/End: Original strand, 29357448 - 29357592
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||| ||||||||| |||||||||  || | |||| ||||| ||||||||||||||||||||||| | ||| |||||||||||||||| || ||||||     
T  29357448 acacggttaactgtgtagttcttatgaaacgggctatcgaaaagaagatgcatcttgttgatatagttagtaccaaacaattcttataaacattccttca 29357547  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattc 366  Q
    |||||| |||| ||| | ||||||||||| | || ||||||||||    
T  29357548 accatgcagtcccatacctgcacgacctcgggatacctctcattc 29357592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 26421752 - 26421882
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||| ||||||  ||| | |||||||||||| |||  | ||||     
T  26421752 acacgcttaactgtgtagttcttatggaatgggctaccgaaaagaagattcatcttgttggtatagggagtacctaacaattcttatgagccttacttca 26421851  T
Q  322 accatggagtctcatgcatgcacgacctcag 352  Q
    |||||| |||||||| |||||||| ||||||    
T  26421852 accatgcagtctcatacatgcacggcctcag 26421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 31743834 - 31743940
Alignment:
Q  241 ttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgca 339  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||| | | | ||||| ||||||||||||| |||||| |||||| ||||||||||     
T  31743834 ttcttatggaatgggctaccgaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatgcagtctcatgct 31743933  T
Q  340 tgcacga 346  Q
    |||||||    
T  31743934 tgcacga 31743940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 26421290 - 26421386
Alignment:
Q  216 aattcagacacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||| ||||| ||||||||||||||||||| |||||  ||||||||| ||  ||||||||||||||||||||| ||||||| |||||||||||||    
T  26421290 aattcaaacacgtttaactgtggagttcttatggaatggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataag 26421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 388
Target Start/End: Original strand, 22529227 - 22529392
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||| ||||||| |  |||||| ||| |||| |||||||||||||||| |||||| | ||| |||||| |||||||||||  ||||||     
T  22529227 acacgcttaactgtgaagttcttttgtaatgagttactgaaaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagccttccttca 22529326  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    |||||| || | ||| | | || |||||||| ||||||||||||| |||  |||||||||| |||||    
T  22529327 accatgtaggcccatacttacatgacctcaggatccctctcattcggat-atgattcggttcgtcta 22529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 368
Target Start/End: Original strand, 36015403 - 36015549
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||| ||||||||| ||||||||| ||||| ||||   ||| ||||| |||||||||||||||| || ||| |||||||||||| |||||  ||||||     
T  36015403 acacgtttaactgtgaagttcttatggaatgggctatttaaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttca 36015502  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||||||||||||| | |||||  |||  | |||||||||||||||    
T  36015503 accatggagtctcatacttgcactgccttgggatccctctcattccg 36015549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 13122498 - 13122561
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 286  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  13122498 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatata 13122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 33316877 - 33316716
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||| |||| ||||||||||||||||  || ||||||||||  |||  ||||||||||||||| ||  | |||||||||||||||||    |||||| |    
T  33316877 acacgtttaattgtggagttcttatagtttgggctaccgaaa--aga--catcttgttgatataagtattgtcaaacaattcttataatttttccttcaa 33316782  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||||||| | |||||||| ||| |||   |||||||||||||| ||||| |||||||||    
T  33316781 ccatgtagtctcatacctgcacgacatcaaaatttatctcattccgatgtggattcagtttgtcta 33316716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 388
Target Start/End: Original strand, 35527117 - 35527278
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    ||||||||||||||||| ||| |||||  |||| |||| ||| ||||||||||||||||||||| | | ||||||||||||||||||  || ||| ||||    
T  35527117 gcttaactgtggagttcctatggaatggactactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaacca 35527216  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
       |||| |||   ||||||||||| | |||||||||||| || || |||||||||| |||||    
T  35527217 accagtcccatatttgcacgacctcgggatccctctcatttcggtg-tgattcggttcgtcta 35527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 5406581 - 5406730
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |  || || ||| |||  ||||||||||||||||||||||||  || ||||||||||||||||    |||||| |    
T  5406581 cacgcttaactgtggagttcttatggtttgggcaaccaaaaataagatgcatcttgttgatataggtaataccaaacaattcttataaatcttccttcaa 5406680  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| |  ||||||| | || |||||| ||||||||||||    
T  5406681 ccatgcagtcccataccggcacgactttaggatccctatcattccgatgt 5406730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 31406577 - 31406665
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||||||||||||||||||||||  || | |||||||||| |||||||||||||||||||||||||   | ||||||||||| |||||    
T  31406577 cacgcttaactgtggagttcttatgaaacgggctaccgaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataag 31406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 383
Target Start/End: Original strand, 29039052 - 29039172
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc-ttctaccatggagtctcatgcatgcacgacctcagaatccctc 360  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||| ||||| |||| ||| |||||| |||| |||   | |||| |||||| || ||||    
T  29039052 aaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagc-ctccattcaaccatgtagtcacatatctacacggcctcaggatgcctc 29039150  T
Q  361 tcattccgatgttgattcggttt 383  Q
    ||||||||||| |||||||||||    
T  29039151 tcattccgatg-tgattcggttt 29039172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 7646471 - 7646528
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 280  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  7646471 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtt 7646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 16192472 - 16192385
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    ||||||| |||||  ||||||||| ||||| |||||| ||| ||||||||||||||||||| |||||  || ||||||||||||||||    
T  16192472 cacgcttcactgtatagttcttatggaatgggctaccaaaacgaagatgcatcttgttgatgtaggtaataccaaacaattcttataa 16192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 7461343 - 7461424
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattc 304  Q
    |||||||||||||| |||||||||| |||||| ||||| ||| ||||||| |||||||| |||||| | ||||||||||||||    
T  7461343 acacgcttaactgtagagttcttat-gaatgaactaccaaaaagaagatgtatcttgtttatatagttagtatcaaacaattc 7461424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 43776283 - 43776322
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaa 263  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  43776283 cacgcttaactgtggagttcttatggaatgagctaccgaa 43776322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 7646568 - 7646514
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 277  Q
    |||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  7646568 cacgcttaactgtggagttcttatggaatgagttaccgaaaacaagatgcatctt 7646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 382
Target Start/End: Original strand, 26957603 - 26957708
Alignment:
Q  276 ttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttga 375  Q
    |||||||||||||| ||| ||||||||||||||||||  || ||| |||||| |||  ||| | | |||  |||||  |||||||||||||||||| |||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatg-tga 26957701  T
Q  376 ttcggtt 382  Q
    |||||||    
T  26957702 ttcggtt 26957708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 43233523 - 43233478
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||    
T  43233523 aagatgcatcttgttgatatagatagtaccaaacaattcttataag 43233478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 326
Target Start/End: Complemental strand, 11372601 - 11372501
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||||| |||||||||||| |  ||||||||| |||  || ||||||| ||||| || |||| ||| ||||||||||||||||||  |||||| ||||    
T  11372601 gcttaactttggagttcttatggtttgagctaccaaaaataacatgcatcatgttggtacaggtagtaccaaacaattcttataagccttccttcaacca 11372502  T
Q  326 t 326  Q
    |    
T  11372501 t 11372501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 336
Target Start/End: Complemental strand, 20966199 - 20966091
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    ||||||||| ||||||||| ||||||||||||| ||| || || |||||||||| |||||||  ||  ||| ||||||||||||   |||||| | ||||    
T  20966199 ttaactgtgaagttcttatggaatgagctaccgaaaataatatacatcttgttggtataggtattacaaaataattcttataagtcatccttcaatcatg 20966100  T
Q  328 gagtctcat 336  Q
     ||||||||    
T  20966099 cagtctcat 20966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 13124769 - 13124838
Alignment:
Q  298 acaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattcc 367  Q
    |||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||  ||||||||||||||    
T  13124769 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattcc 13124838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 16811912 - 16811952
Alignment:
Q  296 aaacaattcttataagcactccttctaccatggagtctcat 336  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  16811912 aaacaattcttataagcattccttcaaccatgtagtctcat 16811952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 13611926 - 13612135
Alignment:
Q  12 gagcacagaaacactcactctaacaggatcccaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttctatgtcgg 111  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13611926 gagcacagaaacactcact--aacaggatccaaaaagggcttggcagagtatttgttctcttatctctctgaattcaattggcgttgcgttgtatgtcgg 13612023  T
Q  112 ttctctagctgaactttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612024 ttctctagctgaagtttttctcattataaccaactttttctcgtaaaagatgcatagaaatcaatgtttcatattatactttggtcaagaagaaatcaca 13612123  T
Q  212 gtagaattcaga 223  Q
    ||||||||||||    
T  13612124 gtagaattcaga 13612135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 223 - 415
Target Start/End: Original strand, 13613884 - 13614077
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13613884 acacgcttaactgtggagttcttatagaatgaactaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagtactccttcta 13613983  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 415  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||  ||||||||||| |||  ||||||||||||||||||||||||||||    
T  13613984 ccatggagtctcatgcatgcacaacctctggatccctctcattcc-attgtgattcggtttatctaaaagttgtcaggtaccactcattatcatg 13614077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 12691986 - 12692144
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  12691986 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 12692085  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  12692086 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 12692144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 223 - 388
Target Start/End: Original strand, 50398979 - 50399144
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50398979 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagccttccttca 50399078  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    |||||| | |||||| | | ||||  ||||| |||||||||||||||||| |||||||| |||||||    
T  50399079 accatgtaatctcatacctacacggtctcaggatccctctcattccgatg-tgattcggcttgtcta 50399144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 388
Target Start/End: Original strand, 50398525 - 50398689
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  50398525 cacgcttaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 50398624  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| ||||  || | | |||| |||||| |||||||||||||||||| |||||||| |||||||    
T  50398625 ccatgtagtcctatacctacacggcctcaggatccctctcattccgatg-tgattcggcttgtcta 50398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 35871780 - 35871632
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||| |||||||||| |||||||  |||||| ||    
T  35871780 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaaatgcatcttgttgatataggtggtaccaaacaattcatataagccttccttcaac 35871681  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  35871680 catgaagtcccatacctgtacggcctcaggatccctctcattccgatgt 35871632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 49998790 - 49998640
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  49998790 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 49998691  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||| ||||| | |||  ||| || |||||||||||||||||||    
T  49998690 accatgcagtcccatgcctacacagccttaggatccctctcattccgatgt 49998640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 44471312 - 44471461
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  44471312 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 44471411  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | || ||| |||||  ||| |||||||||||||||    
T  44471412 ccatgtagtctcatacctgtacggcctcaagatctctctcattccgatgt 44471461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 24629420 - 24629578
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  |    
T  24629420 cacgcttaactgtggaattcttatggaacgaggtaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattcctttaa 24629519  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | ||||||||||| | ||||||||||||| || ||||||||||    
T  24629520 ccatgcagtcccatacctacacgacctcaggaaccctctcattccggtg-tgattcggtt 24629578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 4127876 - 4128025
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| || ||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  4127876 cacgcttaactctgaagttcttatggaattggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 4127975  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  |||||||||| | || | |||||| |||||||||||||||||||    
T  4127976 ccatatagtctcatgcctacatggcctcaggatccctctcattccgatgt 4128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 388
Target Start/End: Original strand, 51331268 - 51331432
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  51331268 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 51331367  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| |||||||| |||||||    
T  51331368 ccatgtagtcccatacctacacggcctcatgattcctctcattccgatg-tgattcggcttgtcta 51331432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 231 - 382
Target Start/End: Original strand, 4127431 - 4127582
Alignment:
Q  231 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 329  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| || ||| |    
T  4127431 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgta 4127530  T
Q  330 gtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||| ||| | | || | |||||| |||||||||||||||||| ||||||||||    
T  4127531 gtcccatacctacatggcctcaggatccctctcattccgatg-tgattcggtt 4127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 382
Target Start/End: Original strand, 21220317 - 21220476
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||     
T  21220317 acacgcttaactgtgtagttcttatagaatgagttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattccttca 21220416  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    |||||  ||| |||| | | || | |||||  ||||||||||||| |||| ||||||||||    
T  21220417 accatatagtttcatacctacatggcctcatgatccctctcattctgatg-tgattcggtt 21220476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 23942776 - 23942934
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  23942776 cacgcttaactgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 23942875  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||  ||| | | |||| || ||| |||||||||||||||||| ||||||||||    
T  23942876 ccatgtagttccatacctacacggccccaggatccctctcattccgatg-tgattcggtt 23942934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 223 - 382
Target Start/End: Original strand, 29628654 - 29628812
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||| ||||| |||||| ||  ||||  |||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  29628654 acacgcttaactgtggagttcttatggaatgggctaccaaacaaagacacatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 29628753  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||||||| | | |||| |||||| |||||||||||| ||||| ||||||||||    
T  29628754 ccatgtagtctcatacctacacggcctcaggatccctctcatttcgatg-tgattcggtt 29628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 14351949 - 14351784
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| ||||  | |||| ||| ||||||||||||||||||||||| | ||| |||| || ||||| ||||  ||||||     
T  14351949 acacgcttaactgtggagttcttatggaataggataccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagccttccttca 14351850  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    |||||| || ||||| ||||||||||||||| ||||||||||||| | || ||||||||||||||||    
T  14351849 accatgcagactcatacatgcacgacctcaggatccctctcattctggtg-tgattcggtttgtcta 14351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 228 - 388
Target Start/End: Original strand, 9423849 - 9424009
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||| |||| | ||||||| ||||| |||||  ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||  || ||| |||||    
T  9423849 cttaattgtgaaattcttatggaatgggctactagaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttctttcaaccat 9423948  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    | |||| ||| ||||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  9423949 gcagtcccatacatgcacgacctcaggatccctctcattccggtg-tgattcggttcgtcta 9424009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 21067435 - 21067290
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||| |||| |||| ||   |||||| |    
T  21067435 cacgcttaattgtggagtacttttagaatgagctaccggaaagaagatgcatcttgttgatatatgtagtaccaaataattattattagtcttccttcaa 21067336  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||||||| ||||||||||||| | |||||||||||||||    
T  21067335 ccatgcagtctcatacatgcacgacctcgggatccctctcattccg 21067290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 1645736 - 1645894
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||||  || |||||||||||||||||   |||||| |    
T  1645736 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagtcttccttcaa 1645835  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| ||||||||||    
T  1645836 ccatgtagtcccatacctacacggcctcaagattcctctcattccgatg-tgattcggtt 1645894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 31817839 - 31817988
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| || |||||||||  ||||  ||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||||  |||||| |    
T  31817839 cacgcttaactatgaagttcttatgaaatggactaccgaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagccttccttcaa 31817938  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| |||||| ||||||| ||||||||| ||||||||||    
T  31817939 ccatgcagtcccatacatgcatgacctcataatccctcttattccgatgt 31817988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 24628964 - 24629125
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc---actcctt 319  Q
    |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||   | |||||    
T  24628964 cacgcttaactgtggagttcttatggaacgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctaattcctt 24629063  T
Q  320 ctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
      |||||| |||| ||| | | |||| |||||| | ||||||||||||| || ||||||||||    
T  24629064 taaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 24629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 50814812 - 50814899
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  50814812 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 372
Target Start/End: Original strand, 14572148 - 14572286
Alignment:
Q  234 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 333  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||| |||||| ||||     
T  14572148 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcc 14572247  T
Q  334 catgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||| | | || | |||||| |||||||||||||||||||    
T  14572248 catacctacatggcctcaggatccctctcattccgatgt 14572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 23350270 - 23350419
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| || ||||||||| ||| |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  23350270 cacgcttaactatgaagttcttatggaaggagctaccgaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataagccttccttcaa 23350369  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| | | | || ||| |||||  ||| |||||||||||||||    
T  23350370 ccatgcagtcccctacctgtacggcctcaagatctctctcattccgatgt 23350419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 7678613 - 7678713
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |||||    
T  7678613 cttaactgtggagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccat 7678712  T
Q  327 g 327  Q
    |    
T  7678713 g 7678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 44470862 - 44470950
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  44470862 cacgcttaactgtggagttcttatggaatgagttacgaacagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 44470950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 382
Target Start/End: Original strand, 53996106 - 53996260
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||| |||||| |||||    
T  53996106 cttaactgtggagttcttatggaatgagataccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagcattccttcaaccat 53996205  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    | |||| |||   | ||   |||||| |||| ||||||||||||| ||||||||||    
T  53996206 gtagtcccatatctacatagcctcaggatccttctcattccgatg-tgattcggtt 53996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 27026655 - 27026567
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||  | ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  27026655 cacgcttaactacgtagttcttatggaatgggctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagc 27026567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 3169359 - 3169201
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| || || | |||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||   |||||| |    
T  3169359 cacgcttaagtgtggagttcttatggattgggttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagtcttccttcaa 3169260  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | |||| |||||  || ||||||||||||||| ||||||||||    
T  3169259 ccatgtagtcccatacctacacggcctcatgattcctctcattccgatg-tgattcggtt 3169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 228 - 382
Target Start/End: Complemental strand, 4185864 - 4185709
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||| | | |||||  |||||    
T  4185864 cttaactgtagagttcttgtagaatgagctaccaaaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttatatgtattcctttaaccat 4185765  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    |  ||||||| | |||| | |||||  | ||||||||||  |||||  ||||||||    
T  4185764 gccgtctcatacctgcatggcctcatgaaccctctcattttgatgtgaattcggtt 4185709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 31817384 - 31817534
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||| ||| |||||||||  ||||| ||| | |||| |||||||||| |||||| ||||||| ||| ||||||||| |||||| |  ||||||     
T  31817384 acacgcttaattgtagagttcttaaggaatgggctgcggaaaagaagatgcattttgttggtataggtagtaccaaacaattattataaacgttccttca 31817483  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||||||| ||||||||||||||  |||||||| ||| ||||||    
T  31817484 accatgaagtctcatacatgcacgacctcatgatccctcttatttcgatgt 31817534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 224 - 332
Target Start/End: Original strand, 14571708 - 14571817
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  14571708 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 14571807  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  14571808 ccatgaagtc 14571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 1464300 - 1464212
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||| || |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1464300 cacgctaaattgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataag 1464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 27029426 - 27029342
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| || ||| |||| ||||||||||||    
T  27029426 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataag 27029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 15306078 - 15306153
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 298  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  15306078 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaa 15306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 23943229 - 23943317
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| | || |||||||    
T  23943229 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataag 23943317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 309
Target Start/End: Original strand, 23091501 - 23091584
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttata 309  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| || ||| ||||||||| |||||    
T  23091501 gcttaactgtggagtttttatagaataagctaccagaaagaagatgcatcttgttaatatatgtagtaccaaacaatttttata 23091584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 8467826 - 8467936
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||   |||||| |||||| |||||||| | |||||   ||||| |||||| |    
T  8467826 aaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatcccttt 8467925  T
Q  362 cattccgatgt 372  Q
    ||||| |||||    
T  8467926 cattctgatgt 8467936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 372
Target Start/End: Complemental strand, 17029479 - 17029334
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||||||||||||| |||| || |||| |||| || ||||||||||||||||||||| |||  |||||||| ||| |||   || ||| || ||    
T  17029479 cttaactgtggagttcttatggaataaggtaccaaaagtaatatgcatcttgttgatataggtagtactaaacaattattacaagtcttcattcaactat 17029380  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    | |||| ||| | |||||||||||   |||||||||||||||||||    
T  17029379 gcagtcccatacttgcacgacctctagatccctctcattccgatgt 17029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 383
Target Start/End: Original strand, 24271552 - 24271699
Alignment:
Q  238 gagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatg 337  Q
    |||||||||| ||||| |||||| ||| || ||||||||||||  ||||||| |||||||| |||||||||| |   | |||  |||||| ||||||||     
T  24271552 gagttcttatggaatgggctacccaaaaaatatgcatcttgttcgtataggtagtatcaaataattcttatatgtcttactttaaccatgtagtctcata 24271651  T
Q  338 catg--cacgacctcagaatccctctcattccgatgttgattcggttt 383  Q
    | ||  ||||||||||| | |||||||||||||||||  |||||||||    
T  24271652 cctgcacacgacctcaggaaccctctcattccgatgtgaattcggttt 24271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 17628669 - 17628575
Alignment:
Q  219 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||| |||||| ||||||||| ||||||| |  || |||| ||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  17628669 tcaggcacgctcaactgtggaattcttatgggttgggctatcgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagc 17628575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 310
Target Start/End: Original strand, 52048659 - 52048740
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    ||||||||||||||||||| ||||||  |||  || ||||||||||||||||  |||| || ||||||||||||||||||||    
T  52048659 ttaactgtggagttcttatggaatgacttacaaaatgaagatgcatcttgttagtatacgtagtatcaaacaattcttataa 52048740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 33765013 - 33764929
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 307  Q
    ||||||||| |||| |||||||||| ||||||||||  ||| ||||||||||||||||| ||||||| | | |||||||||||||    
T  33765013 cacgcttaagtgtgaagttcttataaaatgagctacaaaaaagaagatgcatcttgttggtataggtagcaccaaacaattctta 33764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 350
Target Start/End: Complemental strand, 21067884 - 21067760
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||||||||| ||||||||| |||||  ||||| ||| ||  || ||||||||||||||||| | | |||||||||||||||||   |||||| ||    
T  21067884 cacgcttaactgtgaagttcttatggaatggactaccaaaaaaa--tgtatcttgttgatataggtagcaccaaacaattcttataagtcttccttcaac 21067787  T
Q  324 catggagtctcatgcatgcacgacctc 350  Q
    |||| |||| ||| | |||||| ||||    
T  21067786 catgcagtcccatacctgcacggcctc 21067760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 27578444 - 27578531
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    ||||||||||| |||||||||||| |  || | |||||||| ||||||||||||||||||||||||| | | |||| |||||||||||    
T  27578444 cacgcttaactatggagttcttatggtttgggataccgaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataa 27578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 389
Target Start/End: Original strand, 43928989 - 43929116
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    |||||||||||||||||||| |||| || ||| |||||||||||| |||||  |||||| ||||   |||||||| | |||||| | |||| | ||||||    
T  43928989 aaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagctttccttcgaccaaatagtctcatacctgcacggcttcaggaaccctct 43929088  T
Q  362 cattccgatgttgattcggtttgtctaa 389  Q
    |||| | | || ||||||||||| ||||    
T  43929089 catttcaaagtggattcggtttgcctaa 43929116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 53391990 - 53391927
Alignment:
Q  273 atcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcat 336  Q
    ||||||||||||||| ||||||||||||||| ||||||||| | |||| |||||| ||||||||    
T  53391990 atcttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgcagtctcat 53391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 41870032 - 41869922
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||   |||||| | |||| |||| |||  ||| ||   ||||| ||||||||    
T  41870032 aaagaagatgcgtcttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatccctct 41869933  T
Q  362 cattccgatgt 372  Q
    || ||||||||    
T  41869932 cactccgatgt 41869922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 20306151 - 20306237
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||| ||| |||||||||  |||| | |||| |||  ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  20306151 cacgcttaaccgtgtagttcttatgaaatgggataccaaaa--agatgcatcttgttgatatagatagtaccaaacaattcttataagc 20306237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 17028984 - 17028878
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    |||| ||||||||||||||||||| | | | ||||||||||| ||   ||||||| || ||| |||| ||| |||||| | | |||| ||||||||||||    
T  17028984 aagacgcatcttgttgatataggtagcacctaacaattcttacaaatcctccttcaactatgcagtcccatacatgcaaggcttcaggatccctctcatt 17028885  T
Q  366 ccgatgt 372  Q
    |||||||    
T  17028884 ccgatgt 17028878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 23976245 - 23976293
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    |||||||||||||||||||  ||||||| ||| ||||||||||||||||    
T  23976245 aaagaagatgcatcttgttagtataggtagtaccaaacaattcttataa 23976293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 42838780 - 42838690
Alignment:
Q  223 acacgcttaactgtgga-gttcttatagaatgagctaccgaaaga---agatgcatcttgttgatataggtggtatcaaacaattcttata 309  Q
    ||||||||||||||| | |||||||| |||||| ||| ||||| |   |||||||| |||||||||||||| ||| ||||||||| |||||    
T  42838780 acacgcttaactgtgaaagttcttatggaatgaactatcgaaaaagaaagatgcattttgttgatataggtagtaccaaacaatttttata 42838690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 4186315 - 4186224
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcctt 319  Q
    ||||||||| |||||||||  |||| |||||| ||| ||||||| |||||||| || ||||| ||| ||||  ||||||||||||| |||||    
T  4186315 ttaactgtgtagttcttatgcaatgggctaccaaaaagaagatgaatcttgttcatgtaggtagtaccaaatcattcttataagcattcctt 4186224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 11828472 - 11828509
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg 261  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  11828472 cacgcttaactgtggagttcttatggaaggagctaccg 11828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 34554577 - 34554492
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagca 313  Q
    |||||| || ||||||||| |||||  ||||| |||  || |||||||||| || ||||||| || ||||||||||||||||||||    
T  34554577 ttaactatgaagttcttatggaatggtctaccaaaaataaaatgcatcttgctggtataggtagtgtcaaacaattcttataagca 34554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 27578896 - 27578984
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||||||| ||||||||| ||  | ||||| |||| |||||||  |||  |||||||| || ||| |||||||||||||||||    
T  27578896 cacgcttaactgtgtagttcttatggatagggctactgaaaagaagatgtgtctaattgatatatgtagtaccaaacaattcttataag 27578984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 3886593 - 3886743
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||    
T  3886593 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcattccttct 3886692  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||| ||| | || |||||||||| |||||||||||||||||||    
T  3886693 accatgcagtcccatacttgtacgacctcaggatccctctcattccgatgt 3886743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 2474112 - 2473963
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||  |||||| |    
T  2474112 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagccttccttcaa 2474013  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||||| || ||||||| || |||||||||||||||||||    
T  2474012 ccatgcagtctcatgcctgtacgaccttaggatccctctcattccgatgt 2473963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 17445448 - 17445606
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccga-aagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17445448 cacgcttaactgtggatttcttatggaatgagctaccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17445547  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||||| | |||| |||||| |||||||||||| ||||| ||||||||||    
T  17445548 ccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatg-tgattcggtt 17445606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 227 - 372
Target Start/End: Complemental strand, 189218 - 189072
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| ||||    
T  189218 gcttaactgtggagttcttatggaatgagctaccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagccttccttcaacca 189119  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    || |||| ||| |||| ||| |||||| |||||||||||||||||||    
T  189118 tgcagtcccatacatgtacggcctcaggatccctctcattccgatgt 189072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 219 - 372
Target Start/End: Complemental strand, 22556694 - 22556540
Alignment:
Q  219 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 317  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||  |||    
T  22556694 tcagccacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagccttcc 22556595  T
Q  318 ttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||| |||||| |||| ||| | |||||| |||||| | |||||||||||||||||    
T  22556594 ttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccgatgt 22556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 8642027 - 8642176
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  8642027 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 8642126  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| ||| || ||||||||||||| |||||    
T  8642127 ccatgcagtcccatacctgcacggccttaggatccctctcattctgatgt 8642176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 10927396 - 10927554
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10927396 cacgtttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927495  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||||||| | | |||| |||||  |||||||||||||||||| ||||||||||    
T  10927496 ccatgtagtctcatacctacacggcctcaagatccctctcattccgatg-tgattcggtt 10927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 34867943 - 34867785
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  34867943 cacgcttaactatggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 34867844  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  34867843 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 34867785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 1822059 - 1821910
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  1822059 cacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 1821960  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | |||||||||| |  ||| |||||||||||||||    
T  1821959 ccatgcagtctcatacctgcacgaccttaagatctctctcattccgatgt 1821910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 383
Target Start/End: Original strand, 8391315 - 8391473
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||||   |||||| |    
T  8391315 cacgcttaactatggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatacaggag-taccaaacaattcttataagtcttccttcaa 8391413  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 383  Q
     |||| |||||||||| | |||| ||||||||||||||||||||||||| |||||||||||    
T  8391414 tcatgtagtctcatgcctacacggcctcagaatccctctcattccgatg-tgattcggttt 8391473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 10926939 - 10927097
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| ||||||||||||||||||| |||||  ||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10926939 cacgtttaactgtggagttcttatggaatggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 10927038  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | ||||||||||| ||||||||||||| |||| ||||||||||    
T  10927039 ccatgtagtcccatacctacacgacctcaggatccctctcattctgatg-tgattcggtt 10927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 228 - 382
Target Start/End: Original strand, 21886143 - 21886297
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||    
T  21886143 cttaactttggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccat 21886242  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    | |||| ||| | ||||| ||||||| | ||||||||||||| || ||||||||||    
T  21886243 gcagtcccatacctgcacaacctcaggaaccctctcattccggtg-tgattcggtt 21886297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 2193969 - 2193824
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2193969 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2193870  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | |||||  |||||||||||||||    
T  2193869 ccatgtagtcccatacctacaaggcctcatgatccctctcattccg 2193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 2474558 - 2474409
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||   |||||| |    
T  2474558 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagtcttccttcaa 2474459  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| |||   || ||||||| || ||| |||||||||||||||    
T  2474458 ccatgcagtcccatatctgtacgaccttaggatctctctcattccgatgt 2474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 388
Target Start/End: Original strand, 20039472 - 20039631
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    ||||||||| |||||||||| ||||| |||||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| || |||    
T  20039472 cttaactgtagagttcttatggaatgggctaccaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaactatg 20039571  T
Q  328 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
     ||||  || | | |||| |||||  |||||||||||||||||| ||||||||||||||||    
T  20039572 tagtcctatacctacacggcctcatgatccctctcattccgatg-tgattcggtttgtcta 20039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 42788639 - 42788797
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   || ||| |    
T  42788639 cacgcttaactgtggagttcttgtggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttctttcaa 42788738  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||  | | |||| |||||| ||||||||||||||| || ||||||||||    
T  42788739 ccatgtagtcccaatcctacacggcctcaggatccctctcattccgttg-tgattcggtt 42788797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 219 - 372
Target Start/End: Complemental strand, 22557127 - 22556973
Alignment:
Q  219 tcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactcc 317  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||  |||    
T  22557127 tcaggcacgcttaactgtgaagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataagccttcc 22557028  T
Q  318 ttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||| |||||| |||| ||| | |||||| |||||  | | |||||||||||||||    
T  22557027 ttcaaccatgcagtcccatacctgcacggcctcatgaactctctcattccgatgt 22556973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 34371765 - 34371656
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34371765 cacgcttaactgtggtgttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34371666  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  34371665 ccatgcagtc 34371656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 34372221 - 34372112
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |    
T  34372221 cacgcttaactgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagcattccttcaa 34372122  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  34372121 ccatgtagtc 34372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 3887050 - 3887199
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| |||| ||||| ||||||   |||||| |    
T  3887050 cacgcttaactgtgaagttcttatggaatgagttaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataagtcttccttcaa 3887149  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | || ||| |||||| ||| |||||||||||||||    
T  3887150 ccatgcagtcccatacctgtacggcctcaggatcactctcattccgatgt 3887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 27646828 - 27646986
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  |||| |||||| ||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||  |||||| |    
T  27646828 cacgcttaactgtggagttcttatgaaatgggctaccaaaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaa 27646927  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| || | ||| | | |||| ||  || |||||||||||||||||| ||||||||||    
T  27646928 ccatgtagccccatacctacacggccctaggatccctctcattccgatg-tgattcggtt 27646986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 39147092 - 39146943
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| ||||| || |||||||||||||||||||||    ||||| |    
T  39147092 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataagtctaccttcaa 39146993  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | |||| |||||  |||||||||||| ||||||    
T  39146992 ccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgt 39146943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 383
Target Start/End: Original strand, 30719798 - 30719957
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||||| ||| |||||||||| |||||||  |||||| |    
T  30719798 cacgcttaattgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagccttccttcaa 30719897  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 383  Q
    | |||  ||| ||| | ||||| ||||||| ||||||||||||| |||| |||||||||||    
T  30719898 caatgatgtcccatacttgcacaacctcaggatccctctcattctgatg-tgattcggttt 30719957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 368
Target Start/End: Complemental strand, 18304581 - 18304439
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||  |||||||  | | ||  |||    
T  18304581 gcttaactgtggaattcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataagcttttcatcatcca 18304482  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    || |||| ||| | | ||||||||||| |||| ||||||||||    
T  18304481 tgtagtcccatacctacacgacctcaggatccttctcattccg 18304439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 15513005 - 15513164
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc--actccttc 320  Q
    |||| |||| |||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| ||| ||| | ||||||||||||||||  | ||||||    
T  15513005 cacgtttaattgtggagttcttatggaatgagataccaaaaagaagatgcatcttgttgatattggtagta-ccaacaattcttataagcatattccttc 15513103  T
Q  321 taccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
     |||||| |||| ||| | | |||  ||| |  |||||||||||||||||| ||||||||||    
T  15513104 aaccatgtagtcccatacctacacagcctaatgatccctctcattccgatg-tgattcggtt 15513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 30684549 - 30684698
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |  ||| ||||||||| ||||||||||||||||  ||||| | ||| |||||||||| |||||||   ||||| |    
T  30684549 cacgcttaactgtggagttcttatggtttgacctaccgaaaagaagatgcatcttgtttttatagatagtaccaaacaattcatataagcctcccttcaa 30684648  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    | |||  ||  ||| | ||||| ||||||| ||||| |||||||||||||    
T  30684649 caatgatgttccatacttgcacaacctcaggatccccctcattccgatgt 30684698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 29680099 - 29680166
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggt 289  Q
    |||||||||||||||||||||||||  |||| |||||| ||| |||||||||||||||||||||||||    
T  29680099 acacgcttaactgtggagttcttatgtaatgggctaccaaaaagaagatgcatcttgttgatataggt 29680166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 4673466 - 4673552
Alignment:
Q  226 cgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||||||||||||||| ||||||  |||| ||| ||| |||||||||||||||| ||||| || |||| ||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataag 4673552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 366
Target Start/End: Original strand, 24182239 - 24182381
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||||||||  |||| |||| |  || | ||||||||||||||||||||||||| ||||| | ||| |||| |||||||||||||  |||||| ||    
T  24182239 cacgcttaactgttaagttattatggtttggggtaccgaaagaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaac 24182338  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattc 366  Q
    |||   ||||||| | ||||||  ||||  |||||||||||||    
T  24182339 catttcgtctcatacttgcacgttctcaagatccctctcattc 24182381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 20858538 - 20858623
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    ||||||| |||||||||||| ||||||||||| | |||||||| |||||||||||||||||    || ||||||||||||||||||    
T  20858538 cttaactatggagttcttatggaatgagctacagaaaagaagaagcatcttgttgatatagaaaataccaaacaattcttataagc 20858623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 18750201 - 18750293
Alignment:
Q  236 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |||||| |  |||||| ||||||    
T  18750201 tggagttcttatggaataagctaccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatccttccttcaaccatg 18750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 11757274 - 11757337
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatata 286  Q
    |||||||||||||||||||||||| || ||| |||||| ||||||||||||| |||||||||||    
T  11757274 cacgcttaactgtggagttcttatggattgaactaccgaaaagaagatgcattttgttgatata 11757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 371
Target Start/End: Original strand, 11160712 - 11160822
Alignment:
Q  261 gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctc 360  Q
    ||||||| |||||||||||||| |||| | ||| ||||||||| ||||||||  |||||| || ||| ||| |||| | | |||||| |||  |||||||    
T  11160712 gaaagaatatgcatcttgttgacatagatagtaccaaacaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctc 11160811  T
Q  361 tcattccgatg 371  Q
    |||||||||||    
T  11160812 tcattccgatg 11160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 4657992 - 4658073
Alignment:
Q  230 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    |||||||| ||||||||| |||||  ||||| ||| |||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  4657992 taactgtgaagttcttatggaatggactaccaaaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa 4658073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 22975076 - 22975152
Alignment:
Q  296 aaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||||||||||||||  | |||| |||||| |||| ||| | |||||| |||||| |||||||||||||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgt 22975152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 388
Target Start/End: Original strand, 5066923 - 5067048
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    |||||| ||||||||||||||||||| |  || |||||||||||||||||   |||||  | |||  |||||||| |||||||| |||| | ||| ||||    
T  5066923 aaagaaaatgcatcttgttgatatagataataccaaacaattcttataagttttcctttaatcatacagtctcatacatgcacggcctcgggatctctct 5067022  T
Q  362 cattccgatgttgattcggtttgtcta 388  Q
    ||||| | || ||||||| ||||||||    
T  5067023 cattctggtg-tgattcgatttgtcta 5067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 383
Target Start/End: Original strand, 2058696 - 2058808
Alignment:
Q  270 tgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccga 369  Q
    |||||||||||||||||||| ||| |||||||||| ||||||   |||||| | |||  ||||||||   |||| ||| |||| ||| |||||| |||||    
T  2058696 tgcatcttgttgatataggtagtaccaaacaattcatataagtcttccttcaatcatccagtctcatagctgcatgacttcaggatctctctcaatccga 2058795  T
Q  370 tgttgattcggttt 383  Q
    || |||||||||||    
T  2058796 tg-tgattcggttt 2058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 42429259 - 42429194
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    |||||| |||||| ||||||||| |||| ||| |||||||||||||||||  ||||||| ||||||    
T  42429259 aaagaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatg 42429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 16370740 - 16370811
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 333  Q
    ||||||||| | ||||||||||||| || ||| |||||||||||||||||   |||||| |||||| |||||    
T  16370740 aaagaagatacgtcttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgcagtct 16370811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 43356652 - 43356760
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    ||||||||||||| |||||| | ||||| ||| |||||||||||||||||   ||| || | |||| |||||||| | |||| || ||||| | ||||||    
T  43356652 aaagaagatgcatattgttggtttaggttgtaccaaacaattcttataagtcatcc-tcaatcatgcagtctcatacctgcatgatctcagga-ccctct 43356749  T
Q  362 cattccgatgt 372  Q
    |||||||||||    
T  43356750 cattccgatgt 43356760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 32574651 - 32574740
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    ||||||||||| || |||| ||||||  || |||||| |||| ||||||||| |||||  ||||||| ||| |||||||||| |||||||    
T  32574651 cacgcttaactatgaagttattatagtttgggctaccaaaagaaagatgcattttgtttgtataggtagtaccaaacaattcctataagc 32574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 107456 - 107605
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||| |    
T  107456 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagccttccttcaa 107555  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | || ||| ||||||||||||||||||||||||||    
T  107556 ccatgcagtcccatacctgtacggcctcagaatccctctcattccgatgt 107605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 31284269 - 31284418
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  31284269 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 31284368  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | ||||||||||||  |||||||||||||||||||    
T  31284369 ccatgcagtcccatacctgcacgacctcaagatccctctcattccgatgt 31284418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 28561899 - 28561754
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  28561899 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 28561800  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | |||||| |||||| | |||||||||||||    
T  28561799 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccg 28561754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 16811534 - 16811385
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||||||||  |||||| |    
T  16811534 cacgcttaactgtggaattcttatggaatgagctaccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataagccttccttcaa 16811435  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||||||| ||  | | |||| |||||| |||||||||||||||||||    
T  16811434 ccatggagtcccaaacctacacggcctcaggatccctctcattccgatgt 16811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 228 - 368
Target Start/End: Complemental strand, 39653313 - 39653172
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||| |||||    
T  39653313 cttaactgtggagttctcatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataagctttccttcaaccat 39653214  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    | |||| ||| | |||||| |||||| | |||||||||||||    
T  39653213 gcagtcccatacctgcacggcctcaggaaccctctcattccg 39653172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 41472453 - 41472305
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| ||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |    
T  41472453 cacgtttaaccgtggagttcttatggaatgatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagc-ttccttcaa 41472355  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | || |||||||||| |||||||||||||||||||    
T  41472354 ccatgcagtctcatacctgtacgacctcaggatccctctcattccgatgt 41472305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 50347899 - 50347754
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  50347899 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 50347800  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||| | |||||||| ||| || | |||||| |||||||||||||||    
T  50347799 ccaagtagtctcatacatacaaggcctcaggatccctctcattccg 50347754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 25239069 - 25239211
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  ||||||     
T  25239069 acacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttca 25239168  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcat 364  Q
    |||||  |||| ||| | | |||||||||||||||||||||||    
T  25239169 accatatagtcccatacctacacgacctcagaatccctctcat 25239211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 11180027 - 11180172
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  11180027 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 11180126  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||    
T  11180127 ccatgtagtcccatacctacaaggcctcaggatccctctcattccg 11180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 14814102 - 14813944
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||  |||||  |    
T  14814102 cacgcttaactgtggagttcttatggaacgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataagccttcctttaa 14814003  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||||||| | | |||| |||||| | ||||||||||||| || ||||||||||    
T  14814002 ccatgcagtctcatacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 14813944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 13150547 - 13150657
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  13150547 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 13150646  T
Q  323 ccatggagtct 333  Q
    ||||| |||||    
T  13150647 ccatgtagtct 13150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 39641091 - 39640941
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||   ||||||     
T  39641091 acacgcttaactgtggagttcttatggaatgagctaccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataagtcttccttca 39640992  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||||||| | | |||| |||||| ||| ||||||||| |||||    
T  39640991 accatgtagtctcatacctacacggcctcaggatctctctcattctgatgt 39640941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 8067433 - 8067284
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||   ||||| |    
T  8067433 cacgcttaactatggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccggccttcaa 8067334  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| | || ||| | |||||| ||||||  ||||||||||||||||||    
T  8067333 ccatgcaatcccatacctgcacggcctcagggtccctctcattccgatgt 8067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 20885110 - 20885259
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||   |||||| |    
T  20885110 cacgcttaattgtggagttcttatggaatgtgctactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaa 20885209  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | ||||||||||  |||||||||||| ||||||    
T  20885210 ccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgt 20885259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 25230241 - 25230390
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25230241 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25230340  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | ||||||||||| ||||||||| |||||||||    
T  25230341 ccatgtagtcccatacctacacgacctcaggatccctctccttccgatgt 25230390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 25237828 - 25237977
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||| |||||||||||||||||| ||||| |||||| ||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||||| |    
T  25237828 cacgcataactgtggagttcttattgaatgggctaccaaaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaa 25237927  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | ||||||||||| ||||||||| |||||||||    
T  25237928 ccatgtagtcccatacctacacgacctcaggatccctctccttccgatgt 25237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 25248264 - 25248115
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||| ||| |||||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||| || |||||  |    
T  25248264 cacgctgaaccgtggagttattatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattcctttaa 25248165  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| ||| ||||||||||||||||||||||    
T  25248164 ccatgcagtcccatacctgcacggccttagaatccctctcattccgatgt 25248115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 27187323 - 27187472
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||  |||||||||| ||| ||||||||||||||||||  || ||  |    
T  27187323 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagccttcatttaa 27187422  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| |||||||  |||||| |||||||||||||| ||||    
T  27187423 ccatgcagtcccatacatgcacagcctcaggatccctctcattccaatgt 27187472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 2911248 - 2911084
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||  |||||||||||| |||||| || || ||| |    
T  2911248 cacgcttaactgtggagttcttatggaatgagctaccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataaccattctttcaa 2911149  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    |||||  ||| ||| | |||||| |||| | ||||||||||||| | || |||||||||| |||||    
T  2911148 ccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtg-tgattcggttcgtcta 2911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 13150092 - 13150237
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  13150092 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 13150191  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | |||||| | |||||||||||||    
T  13150192 ccatgtagtcccatacctacaaggcctcaggagccctctcattccg 13150237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 30529840 - 30529691
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| || ||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||  | |||| |    
T  30529840 cacgcttaactatgaagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaa 30529741  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  30529740 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 30529691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 32227653 - 32227509
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227653 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227554  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||    
T  32227553 ccatgtagtcccatacctacaaggcctcag-atccctctcattccg 32227509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 372
Target Start/End: Complemental strand, 7477341 - 7477195
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||| |||||||||||||| |  || |||||||||| ||||||| |||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7477341 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgtatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7477242  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    || |||||||| | |||||||| | || |||||||||||||||||||    
T  7477241 tgcagtctcatacctgcacgactttaggatccctctcattccgatgt 7477195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 372
Target Start/End: Complemental strand, 7494031 - 7493885
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||| |||||||||||||| |  || |||||||||| |||||||||||||||||||||| || ||| |||| |||||||||||||  |||||| ||||    
T  7494031 gcttaaatgtggagttcttatggtttgggctaccgaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaacca 7493932  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    || |||||||| | |||||||| | || ||| |||||||||||||||    
T  7493931 tgcagtctcatacctgcacgactttaggatctctctcattccgatgt 7493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 25230698 - 25230847
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25230698 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25230797  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | | || | |||||| |||||||||||||| ||||    
T  25230798 ccatgtagtctcatacctacatggcctcaggatccctctcattccaatgt 25230847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 25238285 - 25238434
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| ||| |||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  25238285 cacgcttaattgttgagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaaccttccttcaa 25238384  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | | || | |||||| |||||||||||||| ||||    
T  25238385 ccatgtagtctcatacctacatggcctcaggatccctctcattccaatgt 25238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 32227214 - 32227359
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| |||||||| ||| | ||||||||||||||||  |||||| |    
T  32227214 cacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagccttccttcaa 32227313  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | ||| || |||||||||||||||    
T  32227314 ccatgtagtcccatacctacaaggccttaggatccctctcattccg 32227359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 32386727 - 32386830
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  32386727 cacgcttaactgtggagttcttatggaattagctactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 32386826  T
Q  323 ccat 326  Q
    ||||    
T  32386827 ccat 32386830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 14820307 - 14820218
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  14820307 cacgcttaactgtggagttcttatggaacgagctaccgaaaataagatgcatcttgttgatataagtagtaccaaacaattcttataagc 14820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 336
Target Start/End: Original strand, 25238677 - 25238790
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||| || | ||| |||||||||||||||||   |||||| |    
T  25238677 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataagtcttccttcaa 25238776  T
Q  323 ccatggagtctcat 336  Q
    ||||| ||||||||    
T  25238777 ccatgtagtctcat 25238790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 4067353 - 4067441
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  4067353 cacgcttaactgtggagttcttatgtaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataag 4067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 37045188 - 37045030
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||  | |||| ||| ||||||||| |||||||||||||||  || ||||||||||||||||||| ||||||      
T  37045188 cacgcttaactgtggagttcttatggaatagggtaccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagcattccttcat 37045089  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
     |||| |||| ||  | | |||| |||||| ||||||||||||| |||| ||||||||||    
T  37045088 tcatgtagtcccacacctacacggcctcaggatccctctcattcagatg-tgattcggtt 37045030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 25802540 - 25802626
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttat 308  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  25802540 acacgcttaactgtggatttcttatggaatgggctatcgaaaagaagatgcatcttgttgatataggtagtaccaaaccattcttat 25802626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 372
Target Start/End: Complemental strand, 16811074 - 16810929
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||| | |||   ||||||||||||||||  ||| || |||||    
T  16811074 cttaaatgtgaagttcttatggaatgagctaccgaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagccttccatcaaccat 16810975  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    | |||| |||   | |||| |||||  |||||||||||||||||||    
T  16810974 gcagtcccatatctacacggcctcaagatccctctcattccgatgt 16810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 388
Target Start/End: Original strand, 32796936 - 32797092
Alignment:
Q  232 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 330  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   | |||| |||||| ||    
T  32796936 actgtggagttcttatggaatgtgctacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtag 32797035  T
Q  331 tctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    | |||| | | || |  ||||| |||||||| ||| ||||| |||||||| |||||||    
T  32797036 tttcatacctacatggtctcaggatccctcttatttcgatg-tgattcggcttgtcta 32797092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 29224477 - 29224364
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||| ||||||||| |  || |||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||||||   |||||| |    
T  29224477 cacgcttaattgtgaagttcttatggtttgggctaccgaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataagtcttccttcaa 29224378  T
Q  323 ccatggagtctcat 336  Q
    ||||| ||||||||    
T  29224377 ccatgcagtctcat 29224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 41474150 - 41474001
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||| ||||||||||| ||||||||||| | ||| ||| ||| ||  ||||||||||||||||  |||||||||||||||||||||   |||||  |    
T  41474150 cacgcttgactgtggagtttttatagaatgatccaccaaaaagaatatcaatcttgttgatataggaagtatcaaacaattcttataagtcttcctttaa 41474051  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  |||| ||| | || |||||||||  |||||||||||| ||||||    
T  41474050 ccatccagtcacatacctgaacgacctcaagatccctctcatttcgatgt 41474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 310
Target Start/End: Original strand, 26309987 - 26310069
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    |||||||| ||||||| || ||||||||||||  |||||||||||||||| ||| |||| || ||| |||| |||||||||||    
T  26309987 ttaactgtcgagttctaatggaatgagctaccataaagaagatgcatctttttggtatatgtagtaacaaaaaattcttataa 26310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 25802997 - 25803081
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 307  Q
    |||||||||||  |||||||||||  |||| | |||||||| |||||| |||||||||  ||||||| ||| |||||||||||||    
T  25802997 cacgcttaactacggagttcttatgaaatgggataccgaaaagaagatacatcttgtttttataggtagtaccaaacaattctta 25803081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 31103955 - 31104041
Alignment:
Q  228 cttaactgtggagttcttatagaatgag--ctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||| |||| ||||||||| |||||||  ||||| ||| ||| |||||||| |||| ||||| | |||||||||||||||||||||    
T  31103955 cttaaatgtgaagttcttatggaatgagagctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataag 31104041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 3890088 - 3890046
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttat 308  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  3890088 aagatgcatcttgttgatatatgtagtagcaaacaattcttat 3890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 228 - 372
Target Start/End: Original strand, 20061188 - 20061333
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||    
T  20061188 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccat 20061287  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    | |||| ||| | ||||||||||||| ||||||||||||| |||||    
T  20061288 gcagtcccatacctgcacgacctcaggatccctctcattctgatgt 20061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20054073 - 20054231
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054073 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054172  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20054173 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20054529 - 20054687
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054529 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20054628  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20054629 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20054687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20054985 - 20055143
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20054985 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055084  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055085 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20055143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20055441 - 20055599
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055441 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055540  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055541 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20055599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20055897 - 20056055
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20055897 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20055996  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20055997 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20056055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20056353 - 20056511
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20056353 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20056452  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20056453 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20056511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20057256 - 20057414
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20057256 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20057355  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  20057356 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 20057414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 20845654 - 20845812
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20845654 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagccttccttcaa 20845753  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||||||| | |||||| |||||| | || |||||||||| || ||||||||||    
T  20845754 ccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtg-tgattcggtt 20845812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 43057516 - 43057674
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  43057516 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaa 43057615  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||||||| | | |||| |||||| |||||||||||||||||| ||||||||||    
T  43057616 ccatgtagtctcatacctacacggcctcaggatccctctcattccgatg-tgattcggtt 43057674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 50002699 - 50002849
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  50002699 acacgcttaactatggagttcttaaagaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 50002798  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||| ||||| | |||| |||||| ||| |||||||||||||||    
T  50002799 accatgcagtcccatgcctacacggcctcaggatctctctcattccgatgt 50002849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 35759601 - 35759750
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35759601 cacgtttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35759700  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| |||||| |||||||||||||||||||    
T  35759701 ccatgcagtcccatacctgcacggcctcaggatccctctcattccgatgt 35759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 35760907 - 35761056
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||  |||||||| || |||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  35760907 cacgcttaactacggagttctcatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 35761006  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | |||||| |||||| |||||||||||||||||||    
T  35761007 ccatgcagtctcatacctgcacggcctcaggatccctctcattccgatgt 35761056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 231 - 382
Target Start/End: Original strand, 50002285 - 50002436
Alignment:
Q  231 aactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgga 329  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||| |||||| |    
T  50002285 aactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgta 50002384  T
Q  330 gtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||| ||||| | |||| |||||  |||||||||||||||||| ||||||||||    
T  50002385 gtcccatgcctacacggcctcatgatccctctcattccgatg-tgattcggtt 50002436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 38341059 - 38340901
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  38341059 cacgcttaactgtgaagttcttatggaatgagctaccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 38340960  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | || |||||||||| || ||||||||||    
T  38340959 ccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtg-tgattcggtt 38340901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 2635078 - 2634928
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||| ||   ||||||     
T  2635078 acacgcttaactgtggagttcttattgaatgagctaccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttatgagttatccttca 2634979  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| |||| ||| | ||||| ||||||  |||||||||||||||||||    
T  2634978 accatgcagtcccatacctgcacaacctcatgatccctctcattccgatgt 2634928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 224 - 365
Target Start/End: Original strand, 20057712 - 20057854
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  20057712 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttctttcaa 20057811  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||    
T  20057812 ccatgcagtcccatacctgcacggcctcaggaaccctctcatt 20057854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 227 - 388
Target Start/End: Original strand, 30872946 - 30873107
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||   |||||| ||||    
T  30872946 gcttaattgtggagttcttatagaatggactaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaagtcttccttcaacca 30873045  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    |  |||||||| | |||||| |||||||||||||||||||||| || |||||||||| |||||    
T  30873046 tacagtctcatacctgcacggcctcagaatccctctcattccggtg-tgattcggttcgtcta 30873107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 52250359 - 52250201
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  52250359 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcga 52250260  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | || | |||||  ||||||||||||||| || ||||||||||    
T  52250259 ccatgtagtcccatacctacaaggcctcatgatccctctcattccggtg-tgattcggtt 52250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 16451926 - 16452075
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16451926 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16452025  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| | | | | || | |||||| |||||||||||||||||||    
T  16452026 ccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgt 16452075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 16461079 - 16461228
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  16461079 cacgcttaactgtggagttcttatggaatgaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagctttccttcaa 16461178  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| | | | | || | |||||| |||||||||||||||||||    
T  16461179 ccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgt 16461228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 43057058 - 43057215
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||  |||||| |    
T  43057058 cacgcttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttctaagccttccttcaa 43057157  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | | |||| ||| || ||||| ||||||| |||| ||||||||||    
T  43057158 ccatgtagtcacatacctacacggccttaggatccc-ctcattctgatg-tgattcggtt 43057215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 46693728 - 46693878
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| ||||  |||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  46693728 cacgcttaactgtggagttattatgaaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagccttccttcaa 46693827  T
Q  323 ccat-ggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||   |||| ||| |||||||||||| || |||||||||||||||||||    
T  46693828 ccatcacagtcccatacatgcacgaccttaggatccctctcattccgatgt 46693878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 20056808 - 20056898
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  20056808 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagc 20056898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 20060337 - 20060422
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  20060337 cttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20060422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 388
Target Start/End: Complemental strand, 12883678 - 12883513
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||| ||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||| | ||||||     
T  12883678 acacacttaactgtggagtttttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtattccttca 12883579  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    | |||| |||| ||| | |||||  |||| | |||| |||||||||| || |||||||||| |||||    
T  12883578 atcatgcagtcccatacctgcacagcctcgggatccatctcattccggtg-tgattcggttcgtcta 12883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 229 - 372
Target Start/End: Complemental strand, 2328463 - 2328319
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| ||||||    
T  2328463 ttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatg 2328364  T
Q  328 gagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
     |||| ||| | || ||| ||||| |||  |||||||||| ||||    
T  2328363 cagtcccatacctgtacggcctcataatttctctcattccaatgt 2328319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 51372867 - 51372970
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||||||  |||||| |    
T  51372867 cacgcttaactgtggagttcttatggaatgagctaccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagccttccttcaa 51372966  T
Q  323 ccat 326  Q
    ||||    
T  51372967 ccat 51372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 31822657 - 31822805
Alignment:
Q  225 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||||||| ||||||||||| || ||| |||| |||||||||||    |||||| ||    
T  31822657 acgcttaactgtggagttcttttggattgagctaccgaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaatcttccttcaac 31822756  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||| |||||||| | | |||| |||||  ||||||||||||| |||||    
T  31822757 catgtagtctcatacctacacggcctcatgatccctctcattctgatgt 31822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 50003068 - 50003226
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||||||||||| ||| | ||||||| |||||||    ||||  |    
T  50003068 cacgcttaactgtgaagttcttttggaatgagctactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataagtctccctttaa 50003167  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| ||||  || | |||| | |||||| |||||||||||||||||| ||||||||||    
T  50003168 ccatgcagtcctatacctgcatggcctcaggatccctctcattccgatg-tgattcggtt 50003226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 365
Target Start/End: Complemental strand, 16907388 - 16907245
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||||| |||||||||| |||||||  | || |||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  || |||     
T  16907388 acacgcttaactatggagttcttgtagaatggaccactgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagccttctttca 16907289  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    |||||| ||| |||| | |||||   |||| |||||||||||||    
T  16907288 accatgcagtttcatacctgcacagtctcaaaatccctctcatt 16907245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 12728142 - 12728056
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggt-atcaaacaattcttataag 311  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  || | |||||||||||||||||    
T  12728142 gcttaactgtggagttcttatggaatgtgctaccgaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataag 12728056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 23180883 - 23180734
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaa-agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||| ||||||| ||||| |||| |||| ||||||| |||||||||||||||||| ||| ||| |||||||||||| || |||||| |    
T  23180883 cacgcttaattgtggaattcttatggaatgggctagcgaatagaagatacatcttgttgatataggtagtaccaagcaattcttataatcattccttcaa 23180784  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||| | |||| ||| | | |||| | |||  |||||||||||||| ||||    
T  23180783 ccacgtagtcccattcctacacggcttcaagatccctctcattccaatgt 23180734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 398
Target Start/End: Complemental strand, 7548243 - 7548070
Alignment:
Q  225 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||| ||||||||||||||  |||| |||||| ||| ||| ||||||||||||||||||| |  || ||||||||| |||||||   |||||  |     
T  7548243 acgcttaattgtggagttcttatcaaatgggctaccaaaaagaatatgcatcttgttgatatagttaataccaaacaatttttataagtcttcctttaat 7548144  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtctaagttgtcagg 398  Q
    |||| |||||||| | | |||| |||||  |||||||||||| | ||| |||||| ||||||| |||||||||||    
T  7548143 catgtagtctcatacctacacggcctcatgatccctctcattgcaatg-tgattcagtttgtcgaagttgtcagg 7548070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 52250696 - 52250641
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 278  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52250696 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 52251033 - 52250978
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttg 278  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  52251033 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttg 52250978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 10820702 - 10820587
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    |||||| ||||| ||||||||||| ||| ||||||||||||||||    |||||| |||||| ||||  || ||| |||  ||||| ||||||||||| |    
T  10820702 aagatgtatcttattgatataggtagtaccaaacaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcact 10820603  T
Q  366 ccgatgttgattcggtt 382  Q
    |||||| ||||||||||    
T  10820602 ccgatg-tgattcggtt 10820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 16440576 - 16440660
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||||| || |||| ||||||||||||||||| ||| ||| ||||||||||||| ||| ||| ||| |||||| ||||||||||    
T  16440576 cttaactttgaagttattatagaatgagctaccaaaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataag 16440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 384
Target Start/End: Original strand, 16410721 - 16410877
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    |||||| || ||||||| ||||||  |||||| |||  |||||||||||||||| ||| ||| |||  ||| |||||||||||||  |||||| || |||    
T  16410721 ttaactttgaagttcttctagaataggctaccaaaaacaagatgcatcttgttggtattggtagtagtaaataattcttataagctttccttcaacaatg 16410820  T
Q  328 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttg 384  Q
     | || ||| |   ||||| ||||||||||||||||||| || ||| ||| ||||||    
T  16410821 cattcccatactcacacgatctcagaatccctctcattctgaagttaatttggtttg 16410877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 2634580 - 2634459
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaat-ccctc 360  Q
    |||||||||||||||||||  ||||| | ||| ||||||||||||  ||||  |||||  | |||| | |||||| ||| ||| ||||||| || |||||    
T  2634580 aaagaagatgcatcttgtttgtatagctagtaccaaacaattcttgcaagccttcctttaatcatgcaatctcatacatacacaacctcaggatcccctc 2634481  T
Q  361 tcattccgatgttgattcggttt 383  Q
    ||||| ||||| |||||||||||    
T  2634480 tcatttcgatg-tgattcggttt 2634459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 31823097 - 31823161
Alignment:
Q  244 ttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctta 307  Q
    |||| |||||||||||| ||| |||||||||| || ||||||||||| ||| |||| ||||||||    
T  31823097 ttatggaatgagctaccaaaaagaagatgcattttattgatataggtagtaccaaataattctta 31823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 224 - 371
Target Start/End: Complemental strand, 30966843 - 30966695
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  30966843 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 30966744  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 371  Q
    ||||| |||| ||| |||| ||| |||||| ||||||||||||||||||    
T  30966743 ccatgcagtcccatacatgtacggcctcaggatccctctcattccgatg 30966695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 223 - 415
Target Start/End: Complemental strand, 33175112 - 33174918
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||     
T  33175112 acacgcttaactgtggagttcttatgaaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttca 33175013  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 415  Q
    |||||| |||| ||| | | |||| |||||| |||||||||||||||||| |||||||| ||||||  |||||||| ||  ||||||||| |||||    
T  33175012 accatgtagtcccatacctacacggcctcaggatccctctcattccgatg-tgattcggcttgtctagaagttgtcgggagccactcattgtcatg 33174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 24818479 - 24818330
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  24818479 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 24818380  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| |||||||| |||||| |||||||||||||||||||    
T  24818379 ccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgt 24818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 16379090 - 16378945
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||   |||||| |    
T  16379090 cacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataagacttccttcaa 16378991  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||||||| | |||||| |||| |||||||||||||||||    
T  16378990 ccatgcagtctcatacttgcacggcctcggaatccctctcattccg 16378945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 41754442 - 41754297
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||  |||||| |    
T  41754442 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagccttccttcaa 41754343  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||||||| | |||||| |||||  | |||||||||||||    
T  41754342 ccatgcagtctcatacctgcacggcctcaagaaccctctcattccg 41754297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 227 - 382
Target Start/End: Original strand, 18098874 - 18099029
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||||    
T  18098874 gcttaactatggagttcttatggaatgagctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaacca 18098973  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    || |||||||| | | |||| |||||| || ||||||||||||||| ||||||||||    
T  18098974 tgtagtctcatacctacacggcctcaggattcctctcattccgatg-tgattcggtt 18099029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 224 - 371
Target Start/End: Complemental strand, 30966387 - 30966239
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  30966387 cacgcttaactatggagttcttatggaatgagataccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 30966288  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 371  Q
    ||||| |||| ||| | || ||| |||||| ||||||||||||||||||    
T  30966287 ccatgcagtcccatacctgtacggcctcaggatccctctcattccgatg 30966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 25434049 - 25434207
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||  |||||| |    
T  25434049 cacgcttaactgtggagttcttatggaatgggctaccagaaaggagatgcatcttgttgataaaggttgtatcaaacaattcttataagccttccttcaa 25434148  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| |  ||||| |||||| ||||||||||||||| || ||||||||||    
T  25434149 ccatgaagtcccataccagcacggcctcaggatccctctcattccggtg-tgattcggtt 25434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 25337990 - 25338135
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  25337990 cacgcttaactgtggagttcttatgaaatgagctatcgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 25338089  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | ||||||||||||| | |||||||||||||    
T  25338090 ccatgcagtcccatacctgcacgacctcaggaaccctctcattccg 25338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 29804835 - 29804686
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||   ||||| |    
T  29804835 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagcctgccttcaa 29804736  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | || | |||||| |||||||||||||||||||    
T  29804735 ccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgt 29804686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 11388340 - 11388184
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11388340 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11388242  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||||||| | | |||| | |||| || ||||||||||||||| ||||||||||    
T  11388241 ccatgtagtctcatacctacacggcatcaggat-cctctcattccgatg-tgattcggtt 11388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 1912677 - 1912529
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||     | ||| ||    
T  1912677 cacgcttaactgtggagttcttatggaatgggctaccaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaatctactttcaac 1912578  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||| |||||||| | | ||  ||||||| |||||||||||||||||||    
T  1912577 catgtagtctcatacctacataacctcaggatccctctcattccgatgt 1912529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 382
Target Start/End: Complemental strand, 16379547 - 16379388
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||| ||||||   ||||||     
T  16379547 acacgcttaactgtggagttcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataagtcttccttca 16379448  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    |||||| |||| ||| | |||||| |||| | |||||||||||||| || |||||||||||    
T  16379447 accatgcagtcccatacctgcacggcctcgggatccctctcattccaat-ttgattcggtt 16379388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 33174656 - 33174494
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  33174656 cacgcttaactgcggagttcttatggaatgggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 33174557  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    |  || |||| ||| | | |||| | |||| |||||||||||||||||| |||||||||| |||||    
T  33174556 c--tgtagtcccatacctacacggcatcaggatccctctcattccgatg-tgattcggttcgtcta 33174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 5399810 - 5399959
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||  |    
T  5399810 cacgcttaactatgaagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttaaa 5399909  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  | || ||| | ||||||||||||  |||||||||||||||||||    
T  5399910 ccatacactcccatacttgcacgacctcaagatccctctcattccgatgt 5399959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 8256679 - 8256570
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  8256679 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 8256580  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  8256579 ccatgtagtc 8256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 223 - 365
Target Start/End: Complemental strand, 83171 - 83028
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||||||| |||||||||| |||||||||||| ||| || ||| |||||||||| ||||||| ||| ||||| |||||||||||||  |||||     
T  83171 acacgcttaactgtagagttcttatggaatgagctaccaaaaaaaagattcatcttgttggtataggtagtaccaaacgattcttataagcataccttca 83072  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    |||||| |||||||| | ||||| | ||||| ||||||||||||    
T  83071 accatgtagtctcatacctgcacaatctcaggatccctctcatt 83028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 415
Target Start/End: Original strand, 38898905 - 38899098
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  |||| | |||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| |    
T  38898905 cacgcttaactgtggagttcttatgaaatgtgttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagctctccttcaa 38899004  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 415  Q
    ||||| ||||| || | | |||| |||||  ||| ||||| |||||||| ||||| || ||||||  |||||||| ||  ||||||||| |||||    
T  38899005 ccatgtagtctgatacctacacggcctcaagatcactctccttccgatg-tgatttggcttgtctagaagttgtcgggagccactcattttcatg 38899098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 33771151 - 33771065
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  33771151 gcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 33771065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 383
Target Start/End: Complemental strand, 1953269 - 1953149
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||| |   |||||| |||||| |||||||| | |||||||| |||| ||||||||    
T  1953269 aaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcaggatccctct 1953170  T
Q  362 cattccgatgttgattcggttt 383  Q
    |||||||||| |||||||||||    
T  1953169 cattccgatg-tgattcggttt 1953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 29259613 - 29259762
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| || |||||||||  ||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| | ||||||  |||||| |    
T  29259613 cacgcttaactatgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagccttccttcaa 29259712  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | || |||  ||||| |||||||||||||||||||    
T  29259713 ccatgcagtcccatacttgtacggtctcaggatccctctcattccgatgt 29259762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 27882918 - 27883061
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctac-cgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||| |||||||||||||| ||| |  ||||   |||||||||||||||| ||||||||| |  || ||||||||||||||||||| ||||||     
T  27882918 acacgcttaattgtggagttcttatggaacggcctacaaaaaagaagatgcatcttattgatatagataataccaaacaattcttataagcattccttca 27883017  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    || ||| |||||||| |||||||| |||||| ||||||||||||    
T  27883018 acaatgcagtctcatacatgcacggcctcaggatccctctcatt 27883061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 11394686 - 11394575
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||| || |||||| |||||| |    
T  11394686 cacgcttaactgtgaagttcttatggaat-agctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagcattccttcaa 11394589  T
Q  323 ccatggagtctcat 336  Q
    ||||| ||||||||    
T  11394588 ccatgtagtctcat 11394575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 382
Target Start/End: Complemental strand, 1707195 - 1707037
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||| ||||||||||||||||||||   ||| |||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  1707195 acactcttaactgtggagttcttatgagatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 1707096  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    | |||| |||||||| | | |||   ||||| || ||||||||||||||| ||||||||||    
T  1707095 atcatgtagtctcatacctacacagtctcaggat-cctctcattccgatg-tgattcggtt 1707037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 15620051 - 15619902
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| || || | | ||  |||||||||| ||||||||||||||||| ||| ||||||||||||||||||   ||||| |    
T  15620051 cacgcttaattgtggagttcttatggattgggtttccaaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagcttgccttcaa 15619952  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    | ||| |||||||| | |||||| | || | ||||||||||||| |||||    
T  15619951 ctatgcagtctcatacttgcacggcatcgggatccctctcattctgatgt 15619902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 30963713 - 30963857
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| |||| |  || |||||| ||||||||||||||||||||||||||||| | | || ||||||||||||||   |||||| |    
T  30963713 cacgcttaactgtggagttattatggtttgggctaccagaaagaagatgcatcttgttgatataggtagaaccatacaattcttataagttttccttcaa 30963812  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattcc 367  Q
    ||||| | |||| | | |||||| | |||  ||||||||||||||    
T  30963813 ccatgcattctcttacctgcacggcttcatgatccctctcattcc 30963857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 349
Target Start/End: Complemental strand, 20502175 - 20502050
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||| |||| |||| |||||||||  |||| |||||| ||| |||| |||||||||||||||||   ||| ||||||||||||||||||  |||||| ||    
T  20502175 cacgtttaattgtgaagttcttatgaaatgggctaccaaaaaaagaagcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaac 20502076  T
Q  324 catggagtctcatgcatgcacgacct 349  Q
    |||| |||| ||| | ||||||||||    
T  20502075 catgcagtcccatacttgcacgacct 20502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 8074042 - 8073957
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||| || ||||||||||||  |||| |||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  8074042 gcttatctatggagttcttatgaaatgggctacaagaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataag 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 382
Target Start/End: Original strand, 18447954 - 18448069
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    ||||||||||||||||||| | || ||| |||||||||||||||||   | |||| |||||| |||| ||| | | |||| |||||| |||||| |||||    
T  18447954 aagatgcatcttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcatt 18448053  T
Q  366 ccgatgttgattcggtt 382  Q
    |||||| ||||||||||    
T  18448054 ccgatg-tgattcggtt 18448069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 13191121 - 13191039
Alignment:
Q  230 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||| ||||||||||||| ||||  ||||| ||| ||||||||||||||||| |||| || ||| |||||||||||||||||    
T  13191121 taactatggagttcttataaaatggactaccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataag 13191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 30963299 - 30963345
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  30963299 aagatgcatcttgttgatataggtagtacctaacaattcttataagc 30963345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 30961876 - 30961964
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaag-atgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||| ||||||||||||||||||| |  |  |||||||||| ||  ||||||||||||||||||||| ||| ||| ||| |||||||||    
T  30961876 cacgtttaactgtggagttcttatggtttcggctaccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttataag 30961964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 15639848 - 15639798
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||| || |||||||||||||| ||| |||||||||| |||||||    
T  15639848 aaagaagatgtatgttgttgatataggtagtaccaaacaattcctataagc 15639798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 32377712 - 32377749
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa 264  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  32377712 gcttaactgtggagttcttttggaatgagctaccgaaa 32377749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 10845036 - 10844878
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  10845036 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaa 10844937  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  10844936 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 10844878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 22026532 - 22026374
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  22026532 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcattcaa 22026433  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||  | ||||||||||||| || ||||||||||    
T  22026432 ccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtg-tgattcggtt 22026374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 27926052 - 27925894
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| |    
T  27926052 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatccttccttcaa 27925953  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  27925952 ccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtg-tgattcggtt 27925894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 2044211 - 2044062
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| |||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||| |    
T  2044211 cacgcttaactgtggagttattatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaa 2044112  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  2044111 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 2044062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 223 - 382
Target Start/End: Original strand, 41659097 - 41659256
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||     
T  41659097 acacgcttaactgtggagttcttatgtaatgagctatcgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttca 41659196  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    |||||| |||| ||| | |||||||| |||| | ||||||||||||| || ||||||||||    
T  41659197 accatgcagtcccatacctgcacgacatcaggaaccctctcattccggtg-tgattcggtt 41659256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 10844608 - 10844753
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||||  |||||| |    
T  10844608 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagccttccttcaa 10844707  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | |||| | |||||| | |||||||||||||    
T  10844708 ccatgcagtcccatacctgcaaggcctcaggaaccctctcattccg 10844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 12827247 - 12827392
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  12827247 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 12827346  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||| | |||| ||| | | || | |||||| |||||||||||||||    
T  12827347 ccaagtagtcccatacctacaaggcctcaggatccctctcattccg 12827392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 224 - 371
Target Start/End: Complemental strand, 17103234 - 17103086
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||||||   |||||| |    
T  17103234 cacgcttaaccgtggagttcttatggaatgagctaccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataagtcttccttcaa 17103135  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatg 371  Q
    ||||| |||||||| | || ||| |||||| ||| ||||||||||||||    
T  17103134 ccatgcagtctcatacctgtacggcctcaggatctctctcattccgatg 17103086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 22548988 - 22549146
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| |    
T  22548988 cacgcttaactgtggagtttttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaa 22549087  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||  |||||| |  |||||||||||| || ||||||||||    
T  22549088 ccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtg-tgattcggtt 22549146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 32292550 - 32292392
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||| | ||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||| |||||| |    
T  32292550 cacgcttaactgtggagttcttatggaatgggctagcaaaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagcattccttcaa 32292451  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  32292450 ccatgcagtcccatacttgcacggcctcaggaaccctctcattccggtg-tgattcggtt 32292392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 368
Target Start/End: Original strand, 22548542 - 22548687
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    |||||| |    
T  22548542 cacgcttaactgtggagttattatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaaacttccttcaa 22548641  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | |||||  |||||| | |||||||||||||    
T  22548642 ccatgcagtcacatacctgcacagcctcaggaaccctctcattccg 22548687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 28453491 - 28453346
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||| |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||| |||| ||||||||||||||||   || ||| |    
T  28453491 cacgcttaactgtagagttcttatggaatgggctaccataaagaagatgcatcttgttaatataggtagtataaaacaattcttataagttttctttcaa 28453392  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||||||| | ||||||||||| | |||||||||||||||    
T  28453391 ccatgaagtctcatacctgcacgacctcgggatccctctcattccg 28453346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 34308472 - 34308621
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||  |||||| |    
T  34308472 cacgcttaagtgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagccttccttcaa 34308571  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  |||||||| | || ||| |||||| |||||| ||||||||||||    
T  34308572 ccatacagtctcatacttgtacggcctcaggatccctttcattccgatgt 34308621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 8080335 - 8080484
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||||| ||||| |||||| ||| ||| ||||||||||||||||||||| ||| |||||||||||||| |||  |||||| |    
T  8080335 cacgcttaactgtgaagttcttatggaatgggctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagctttccttcaa 8080434  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | |||| | |||| |||||||||||||||||||    
T  8080435 ccatgtagtcccatacctacacggcttcaggatccctctcattccgatgt 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 25144925 - 25144836
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  25144925 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagc 25144836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 25147689 - 25147576
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||  |||||| |    
T  25147689 cacgattaactatggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagccttccttcaa 25147590  T
Q  323 ccatggagtctcat 336  Q
    ||||| ||||||||    
T  25147589 ccatgcagtctcat 25147576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 27022331 - 27022480
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaag-aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||| ||| ||||||||||||||||||  || ||| |    
T  27022331 cacgcttaactgtggagttcttatggaatgagctgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagccttctttcaa 27022430  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | || | |||||  |||||||||||||||||||    
T  27022431 ccatgtagtcccatacctacatggcctcaagatccctctcattccgatgt 27022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 223 - 383
Target Start/End: Original strand, 27819238 - 27819398
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||| ||||||||||||||| |||| ||||||||||  |||| |||||||||| |||||||||||||| ||| |||||||||||||| |||  ||||||     
T  27819238 acacacttaactgtggagtttttatggaatgagctattgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttca 27819337  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggttt 383  Q
    |||||| |||||||| | |||| ||| |||  ||||||||||||| |||| |||||||||||    
T  27819338 accatgaagtctcatacttgcatgacttcatgatccctctcattctgatg-tgattcggttt 27819398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 34308928 - 34309081
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatata----ggtggtatcaaacaattcttataagcactcct 318  Q
    |||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||    ||| ||| |||||| |||||||||||  ||||    
T  34308928 cacgcttaactgtggagttcttatggaataggctaccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttcttataagccttcct 34309027  T
Q  319 tctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    || |||||  |||||||| | || ||| |||||| |||||||||||||||||||    
T  34309028 tcaaccatacagtctcatacttgtacggcctcaggatccctctcattccgatgt 34309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 215 - 365
Target Start/End: Original strand, 28375038 - 28375189
Alignment:
Q  215 gaattcagacacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagca 313  Q
    |||||||  ||||||||||| || || | |||| ||| |||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||     
T  28375038 gaattcaagcacgcttaactatgaagctgttatggaaagagctaccgaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagcc 28375137  T
Q  314 ctccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
     |||||| | |||| |||||||| | |||||| |||||| ||||||||||||    
T  28375138 ttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcatt 28375189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 6464903 - 6465052
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  6464903 cacgcttaactgtggagttgttatggaatgagctaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 6465002  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||  ||| | | |||| |||||  || ||||||||||| ||||    
T  6465003 ccatgtagttccatacctacacggcctcatgattcctctcattccaatgt 6465052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 366
Target Start/End: Complemental strand, 25148120 - 25147977
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||   | ||||||||||||||||||  |||||| |    
T  25148120 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagccttccttcaa 25148021  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 366  Q
    | |   |||| ||| | | ||||||||| | |||||||||||||    
T  25148020 cgacacagtcccatacctacacgacctcgggatccctctcattc 25147977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 12100844 - 12100731
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| |||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| ||||||||||   ||||| |    
T  12100844 cacgcttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagcttgccttcaa 12100745  T
Q  323 ccatggagtctcat 336  Q
    ||||| ||||||||    
T  12100744 ccatgcagtctcat 12100731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 228 - 364
Target Start/End: Original strand, 21316106 - 21316243
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||||||||||||||||||  |||||||||| |||| || |||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||  |||||    
T  21316106 cttaactgtggagttcttatgaaatgagctactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccat 21316205  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcat 364  Q
      |||||||| | |||||| ||| || |||||||||||    
T  21316206 acagtctcatacctgcacggccttaggatccctctcat 21316243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 232 - 372
Target Start/End: Original strand, 22840530 - 22840671
Alignment:
Q  232 actgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggag 330  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||||||||||||| | ||| |||||||||||||||||   || ||| |||||| ||    
T  22840530 actgtggagttcttatggaatgagctaacaaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtag 22840629  T
Q  331 tctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |||||| | | ||   |||||| ||| |||||||||||||||    
T  22840630 tctcatacctacaaagcctcaggatctctctcattccgatgt 22840671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 366
Target Start/End: Original strand, 33852251 - 33852394
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||| ||||||||| ||||| |||||| ||| |||||| ||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  33852251 cacgcttaattgtgaagttcttatggaatgggctaccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataagttttccttcaa 33852350  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 366  Q
    ||||  |||||||| | ||||||  ||| | |||||||||||||    
T  33852351 ccatacagtctcatacctgcacggtctcgggatccctctcattc 33852394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 41913123 - 41913034
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||| ||||||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | | ||||||||||||||||||    
T  41913123 cacgcttaactgcggagttcttatggaatgggctaccaaaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagc 41913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 262 - 366
Target Start/End: Original strand, 27021911 - 27022015
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||  |||||| |||||| ||||| || | | || | |||||| ||||||||    
T  27021911 aaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccctct 27022010  T
Q  362 cattc 366  Q
    |||||    
T  27022011 cattc 27022015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 377
Target Start/End: Complemental strand, 3745254 - 3745100
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||| ||||||||||| |||| ||||| |||||| ||| |||||||||| |||||| ||||||| |||  ||||| ||||||||||   |||||| |    
T  3745254 cacgcttgactgtggagttattatggaatgggctaccaaaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttttccttcaa 3745155  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgatt 377  Q
    ||||| ||||    || |||||||||| || |||||||||||| |||||| ||||    
T  3745154 ccatgtagtccttagcctgcacgaccttaggatccctctcatttcgatgtggatt 3745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 1297161 - 1297020
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||| ||||||| ||||||||||||| |||| | |||||||| ||| ||  ||||||||| ||||||| ||| |||||||||||||||||   | ||||     
T  1297161 acacacttaactatggagttcttatataatgggataccgaaaagaatataaatcttgttggtataggtagtaccaaacaattcttataagttttacttca 1297062  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctca 363  Q
    |||||| |||||||| | |||| || ||||||| ||||||||    
T  1297061 accatgcagtctcatacctgcatgatctcagaacccctctca 1297020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 336
Target Start/End: Original strand, 15819014 - 15819121
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    ||||||||| ||||||||| ||||| |||||||||| ||||||||||| |||||||||| || ||| ||||||||| || |||||| |||||| ||||||    
T  15819014 ttaactgtg-agttcttatggaatgtgctaccgaaaagaagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatg 15819112  T
Q  328 gagtctcat 336  Q
      |||||||    
T  15819113 ttgtctcat 15819121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 31283648 - 31283719
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaa 298  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  31283648 cttaactgtggagttcttatggaatgggctaccgaaaagaagatgcatcttgttaatataggtagtaccaaa 31283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 15567548 - 15567698
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    ||||| ||||||| |||||||||||  ||||| ||||| ||| ||||||| ||||||||| |||| || || |||||||||||||||||||  ||||||     
T  15567548 acacgattaactgcggagttcttatgaaatgaactaccaaaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagccttccttcc 15567647  T
Q  322 accatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||||  |||| || | ||| |||  |||  ||| |||||||||||||||    
T  15567648 accatgatgtctaatacttgcgcgatgtcaagatctctctcattccgatgt 15567698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 30527479 - 30527563
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||||||||||||||||||  |||| |||||| ||| ||||||| ||||| ||||| || |||||| |||||||||||||||||    
T  30527479 cttaactgtggagttcttatgaaatgggctacccaaaagaagatgtatcttattgatgtaagtggtaccaaacaattcttataag 30527563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 357
Target Start/End: Complemental strand, 3744788 - 3744657
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||| ||| ||||||||||  |||| |||||| ||| |||| ||||| |||||| ||||||| || ||||||||||||||||||   |||||| ||||    
T  3744788 gcttaattgtagagttcttatgaaatgtgctaccaaaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaacca 3744689  T
Q  326 tggagtctcatgcatgcacgacctcagaatcc 357  Q
    || |||| ||| | | |||||||||| |||||    
T  3744688 tgcagtcccatacctacacgacctcaaaatcc 3744657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 367
Target Start/End: Complemental strand, 22705282 - 22705181
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |  |||||| | |||  |||| ||| | | |||| | |||| ||||||||||||    
T  22705282 aagatgcatcttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcatt 22705183  T
Q  366 cc 367  Q
    ||    
T  22705182 cc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 25307914 - 25307855
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatatag 287  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||| |||||||||||||||    
T  25307914 gcttaactgtggagttcttacagaatgggctacc-aaaaaagatgtatcttgttgatatag 25307855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 30334940 - 30334989
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||||||    
T  30334940 aaagaagatgtatcttgttggtataggtagtatcaaacaatttttataag 30334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 6466820 - 6466775
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  6466820 aagatgcatcttgttggtataggtagtaccaaacaatttttataag 6466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 15568041 - 15568086
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataag 311  Q
    ||||||||||||||||||||||||  || ||||||||| |||||||    
T  15568041 aagatgcatcttgttgatataggtcataccaaacaattgttataag 15568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 10453 - 10304
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||  |||||||||||||||||  |||||  |    
T  10453 cacgcttaactgtggagttcttatggaatgagctaccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagccttccttgaa 10354  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| |||||||| |||||| |||||||||||||||||||    
T  10353 ccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgt 10304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 6e-41; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 388
Target Start/End: Original strand, 20896681 - 20896845
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  20896681 cacgcttaaccgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 20896780  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||||||| | | |||| ||| || |||||||||||||||||| |||||||| |||||||    
T  20896781 ccatgtagtctcatacctacacggcctaaggatccctctcattccgatg-tgattcggcttgtcta 20896845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 224 - 370
Target Start/End: Complemental strand, 13492942 - 13492795
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |    
T  13492942 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttccttcaa 13492843  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgat 370  Q
    ||||| |||||||| | |||||  |||||| |||| ||||||||||||    
T  13492842 ccatgcagtctcatacctgcacagcctcaggatccttctcattccgat 13492795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 388
Target Start/End: Original strand, 6330905 - 6331069
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||   |||||| |    
T  6330905 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataagtcttccttcaa 6331004  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||||||| | | |||| |||||| |||| ||||||||||||| |||||||| |||||||    
T  6331005 ccatgtagtctcatacctacacggcctcaggatccatctcattccgatg-tgattcggcttgtcta 6331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 16520121 - 16519972
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||||||  |||||| |    
T  16520121 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagccttccttcga 16520022  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | | |||  |||||| |||||||||||||||||||    
T  16520021 ccatgtagtctcatacctacacagcctcaggatccctctcattccgatgt 16519972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 17027524 - 17027673
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17027524 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 17027623  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| |||| | |||||||||||||||||||    
T  17027624 ccatgcagtcccatacctgcacggcctctggatccctctcattccgatgt 17027673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 17851071 - 17850907
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| ||| ||||||  |||||| |||| || ||  |    
T  17851071 cacgcttaactgtggagttcttatagaatgggctaccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttatcagcattcttttaa 17850972  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||| ||| | ||||||||||||| ||||||||||||||| || |||||||||| |||||    
T  17850971 ccatgcagtcccatacttgcacgacctcaggatccctctcattccggtg-tgattcggttcgtcta 17850907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 20850474 - 20850316
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||  |||||||||||||||||  |||||| |    
T  20850474 cacgcttaactgtagagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagccttccttcaa 20850375  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||||| |||||  | ||||||||||||| || ||||||||||    
T  20850374 ccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtg-tgattcggtt 20850316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 382
Target Start/End: Complemental strand, 3652634 - 3652481
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatg 327  Q
    ||||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||  |||||| ||||||    
T  3652634 ttaactgtggagttcttatggaatgaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatg 3652535  T
Q  328 gagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
     |||| ||| | | |||  |||||| |||||||||||||||||| ||||||||||    
T  3652534 tagtcccatacctacacagcctcaggatccctctcattccgatg-tgattcggtt 3652481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 372
Target Start/End: Complemental strand, 7912025 - 7911882
Alignment:
Q  230 taactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 328  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||   |||||| ||||||     
T  7912025 taactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgc 7911926  T
Q  329 agtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||  || | |||||| ||||   |||||||||||||||||||    
T  7911925 agtcctatacctgcacggcctcgagatccctctcattccgatgt 7911882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 415
Target Start/End: Original strand, 20126175 - 20126368
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||  |||||| |    
T  20126175 cacgcttaattgtggaattcttatggaatgtgctaccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagccttccttcaa 20126274  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtct--aagttgtcaggtaccactcattatcatg 415  Q
    ||||| |||||||| | | |||  ||| || |||||||||||||||||| |||||| | ||||||  |||||||||||  || |||||| |||||    
T  20126275 ccatgtagtctcatacctacacagccttaggatccctctcattccgatg-tgattcagcttgtctagaagttgtcaggagccgctcattgtcatg 20126368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 7912463 - 7912314
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| ||||||   |||||| |    
T  7912463 cacgtttaactatggagttcttatggaatgagctaccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataagttttccttcaa 7912364  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| ||||   |||||||||||||||||||    
T  7912363 ccatgcagtcccatacctgcacggcctcgagatccctctcattccgatgt 7912314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 9352215 - 9352066
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| | |||||||    ||||| |    
T  9352215 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataagtctcccttcga 9352116  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||||||| | | |||  |||||| |||||||||||| ||||||    
T  9352115 ccatgtagtctcatacctacacagcctcaggatccctctcatttcgatgt 9352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 332
Target Start/End: Original strand, 13191506 - 13191615
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  13191506 cacgcttaactgtgaagttcttatggaacgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 13191605  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  13191606 ccatgcagtc 13191615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 13492485 - 13492396
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  13492485 cacgcttaactgtggagttcttatggaattagctaccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataagc 13492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 17731102 - 17731255
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatct----tgttgatataggtggtatcaaacaattcttataagcactcct 318  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||    ||||||||||||| ||| |||||||||||||||||   ||||    
T  17731102 cacgcttaaatgtggagttcttaaagaatgagctaccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattcttataagtcttcct 17731201  T
Q  319 tctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    |  |||||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  17731202 ttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgt 17731255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 27334301 - 27334169
Alignment:
Q  237 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 335  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27334301 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27334202  T
Q  336 tgcatgcacgacctcagaatccctctcattccg 368  Q
    | | ||||||||||||| | ||||||| |||||    
T  27334201 tacctgcacgacctcaggaaccctctcgttccg 27334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 368
Target Start/End: Complemental strand, 27395041 - 27394909
Alignment:
Q  237 ggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctca 335  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||  ||    
T  27395041 ggagttcttatggaatgagctaccgaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttcca 27394942  T
Q  336 tgcatgcacgacctcagaatccctctcattccg 368  Q
    | | ||||||||||||| | ||||||| |||||    
T  27394941 tacctgcacgacctcaggaaccctctcgttccg 27394909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 382
Target Start/End: Original strand, 2681209 - 2681367
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||||||   || ||| |    
T  2681209 cacgcttaattgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttcattcaa 2681308  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||  | | |||| |||||| | ||||||||||||| || ||||||||||    
T  2681309 ccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtg-tgattcggtt 2681367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 228 - 382
Target Start/End: Original strand, 23986314 - 23986468
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||| ||||||||| |  ||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||   ||||| |||||    
T  23986314 cttaactgtgaagttcttatggtttgagctaccgaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagcctaccttcaaccat 23986413  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    | |||| ||| | | |||| |||| | |||||||||||||||||| ||||||||||    
T  23986414 gtagtcccatacctacacggcctccggatccctctcattccgatg-tgattcggtt 23986468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 381
Target Start/End: Original strand, 9440306 - 9440459
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||| ||||||||| || ||||||||||||| ||| |||||||||||||||||| || ||| | ||||||||||||||||  || ||| |||||    
T  9440306 cttaactgtgaagttcttatggagtgagctaccgaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataagctttcattcaaccat 9440405  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggt 381  Q
    | |||  ||| | |||||||| |||| |||||||||||||||||| |||||||||    
T  9440406 gcagttccatacctgcacgacttcaggatccctctcattccgatg-tgattcggt 9440459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 15929736 - 15929646
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  15929736 acacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagc 15929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 17851527 - 17851363
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||  ||||||||||  || ||  |    
T  17851527 cacgcttaattgtggagttcttatagaatgggctaccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagccttcttttaa 17851428  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    ||||| |||| ||| | |||||| |||| | ||||||||||||||| || |||||||||| |||||    
T  17851427 ccatgcagtcccatacttgcacggcctcgggatccctctcattccggtg-tgattcggttcgtcta 17851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 2720560 - 2720702
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaagaa--gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    |||||||||||||||||||| |||||||||||| ||| ||  ||||  ||||||| |||||||| ||| |||||||||||||||||   |||||| ||||    
T  2720560 cttaactgtggagttcttatggaatgagctaccaaaaaaaaagatgtgtcttgttaatataggtagtaccaaacaattcttataagtcttccttcaacca 2720659  T
Q  326 tggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    || |||||||| | ||||||||||  | |||||||||||||||    
T  2720660 tgcagtctcatacctgcacgaccttgggatccctctcattccg 2720702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 243 - 388
Target Start/End: Original strand, 31821704 - 31821849
Alignment:
Q  243 cttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatg 341  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||| | ||| |||| |||||||||||||| |||||| |||||| |||||||| | |     
T  31821704 cttatggaatgagctaccaaaaaaaagatgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcataccta 31821803  T
Q  342 cacgacctcagaatccctctcattccgatgttgattcggtttgtcta 388  Q
    || | |||||  |||||||||||||||||| ||||||||||| ||||    
T  31821804 catggcctcatgatccctctcattccgatg-tgattcggtttctcta 31821849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 336
Target Start/End: Complemental strand, 11062438 - 11062325
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||| |||  ||||| |||||||||||  |||||| |    
T  11062438 cacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagccttccttcaa 11062339  T
Q  323 ccatggagtctcat 336  Q
    ||||| ||| ||||    
T  11062338 ccatgtagtttcat 11062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 20735844 - 20735759
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    ||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  20735844 cttaactatggagtttttatagaatggactaccgaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagc 20735759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 366
Target Start/End: Complemental strand, 21312124 - 21311981
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||| |||||| |||| |||||||  |||| |||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  21312124 cacgtttaactatggatttcttatgaaatgggctaccaaaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaa 21312025  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 366  Q
    ||||| |||||||| | |||||  |||||  | |||||||||||    
T  21312024 ccatgcagtctcatacctgcacagcctcatgaaccctctcattc 21311981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 21311668 - 21311519
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||| ||||||||||| ||||||||| || ||| ||||||| |||||||| || |||||  || |||||||||||||||||   |||||| |    
T  21311668 cacgcttaactgcggagttcttatggaatgagcttccaaaaagaagatggatcttgtttatctaggtaataccaaacaattcttataaggcttccttcaa 21311569  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | || ||| |||||  | |||||||||||||||||    
T  21311568 ccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgt 21311519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 23776592 - 23776449
Alignment:
Q  225 acgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||| |||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||| || || |||||||||||   |||||| ||    
T  23776592 acgcttaa-tgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataagtcttccttcaac 23776494  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    |||| |||| ||| | | || | |||||| || ||||||||||||    
T  23776493 catgtagtcccatacctacaaggcctcaggatacctctcattccg 23776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 350
Target Start/End: Original strand, 2890832 - 2890959
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||| ||||| | |||||||| ||||||| ||||||||||| ||  | |||||||||||||| |  |||||| |    
T  2890832 cacgcttaactgtggagttcttatggaatgggctactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaaccttccttcaa 2890931  T
Q  323 ccatggagtctcatgcatgcacgacctc 350  Q
    ||||| |||| ||| | |||||| ||||    
T  2890932 ccatgcagtcccatacctgcacggcctc 2890959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 14771716 - 14771857
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctacc-gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    |||||||||||||||||||| ||||    ||||  |||||| ||| ||||||||||||||||| ||| |||||||||||||||||   |||||| |||||    
T  14771716 cttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccat 14771815  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    | |||||||| | | |||| | || | |||||||||||||||    
T  14771816 gcagtctcatacctacacggcttcgggatccctctcattccg 14771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 28583112 - 28583027
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||| ||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  28583112 cttagctgtggatttcttatggaatgaactaccggaaagatgatgcatcttgttgatatagatcgtatcaaataattcttataagc 28583027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 372
Target Start/End: Original strand, 28065831 - 28065980
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctacc----gaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||| |||||||||||||| |||| |||||||     ||| ||||||||||||||||||| || | ||| ||||||||||||||||||  || ||| |    
T  28065831 gcttaattgtggagttcttatggaataagctaccaaaaaaaaaaagatgcatcttgttgatagagatagtaccaaacaattcttataagctttcattcaa 28065930  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
     |||  ||||||||   | |||||||| || |||||||||||||||||||    
T  28065931 tcatacagtctcatttctacacgaccttaggatccctctcattccgatgt 28065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 9440849 - 9440973
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttct 321  Q
    |||| |||||||||| ||||||||| |  || ||||| |||| ||| |||||||||||||||| | || ||| |||| |||||||||||||| ||||||     
T  9440849 acacacttaactgtgaagttcttatggtttgggctactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcattccttca 9440948  T
Q  322 accatggagtctcatgcatgcacga 346  Q
    |||||| |||  ||||| |||||||    
T  9440949 accatgtagttccatgcctgcacga 9440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 15929338 - 15929263
Alignment:
Q  238 gagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||   || ||||||||||||||||||    
T  15929338 gagttcttatggaatgagctaccgaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagc 15929263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 17205479 - 17205405
Alignment:
Q  236 tggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataa 310  Q
    |||||||||||| ||||| |||||| ||| |||||| ||||||||| || |||| ||| ||||||||||||||||    
T  17205479 tggagttcttatggaatgggctaccaaaacaagatgaatcttgttggtaaaggtagtaccaaacaattcttataa 17205405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 28780263 - 28780209
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 277  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  28780263 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 28780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 9440493 - 9440570
Alignment:
Q  295 caaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||||||||||||||||  || ||| |||||| |||| ||| | |||||||| |||| |||||||||||||||||||    
T  9440493 caaacaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccgatgt 9440570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 1991701 - 1991617
Alignment:
Q  229 ttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    ||||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||| ||  || |||||||||||| |||||    
T  1991701 ttaactgtgaagttcttatgaaatgagctaccgaaaagaagatgcatcttgtttagatatgtaataccaaacaattcttgtaagc 1991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 32292995 - 32292889
Alignment:
Q  266 aagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctcatt 365  Q
    |||||| || |||||| ||||||| ||| ||||||||||||||||||  || ||| |||||| |||||||| | ||||||| || || ||  ||||||||    
T  32292995 aagatgtattttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacgatctaaggatttctctcatt 32292896  T
Q  366 ccgatgt 372  Q
    || ||||    
T  32292895 ccaatgt 32292889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 33774994 - 33775101
Alignment:
Q  223 acacgcttaactgtggagttcttatagaatgagcta-ccgaaagaagatgca--tcttgttgatataggtggtatcaaacaattcttataagcactcctt 319  Q
    |||| |||||||||||||||||||| |||||  ||| |  ||||||||||||  |||||||||||||||| | | || ||||||||||||| |  |||||    
T  33774994 acacacttaactgtggagttcttatggaatggactatcaaaaagaagatgcatctcttgttgatataggtagcaccagacaattcttataatccttcctt 33775093  T
Q  320 ctaccatg 327  Q
    | ||||||    
T  33775094 caaccatg 33775101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 20732727 - 20732642
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagc 312  Q
    |||||| || ||||| |||| ||||| |||||||||| ||| |||||| || || |||||||| ||| |||| |||||||||||||    
T  20732727 cttaaccgtagagtttttattgaatgggctaccgaaaagaatatgcatattattaatataggtagtaccaaataattcttataagc 20732642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 224 - 366
Target Start/End: Original strand, 2044 - 2187
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2044 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2143  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattc 366  Q
    ||||| |||||||| | |||||| |||||| | |||| ||||||    
T  2144 ccatgcagtctcatacctgcacggcctcaggaaccctttcattc 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 19119 - 18970
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  19119 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 19020  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| |||| | |||||||||||||||||||    
T  19019 ccatgcagtcccatacctgcacggcctctggatccctctcattccgatgt 18970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 18128 - 18276
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctac 323  Q
    |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||   |||||| ||    
T  18128 cacgcttaactgtggagttcttatggaattagctaccaaaaaaagatgcatcttgttgatataggtagtatcaaacaattcttataagtcttccttcaac 18227  T
Q  324 catggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
     ||| |||| ||| | | |||| |||||| |||||||||||||||||||    
T  18228 tatgtagtcacatacctacacggcctcaggatccctctcattccgatgt 18276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 17591 - 17740
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||||||||||||||||  | ||||||||| ||| |||||| |||| ||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  17591 cacgcttaactgtggagttcttatgaattgagctaccaaaaagaagatacatcctgttgatataggtagtaccaaacaattcttataagctttccttcaa 17690  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | |||| |||||| ||||||||||||| |||||    
T  17691 ccatgtagtcccatacctacacggcctcaggatccctctcattctgatgt 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 2895 - 2746
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||||||||||||  |||||| |    
T  2895 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaa 2796  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | | |||| |||||| |||||||||||| ||||||    
T  2795 ccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgt 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Complemental strand, 105873 - 105724
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  105873 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagccttccttcaa 105774  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    || || |||  ||| | || ||| |||||| |||||||||||||||||||    
T  105773 ccctgcagttccatacctgtacggcctcaggatccctctcattccgatgt 105724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 78; Significance: 4e-36; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 162671 - 162820
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||   |||||| |    
T  162671 cacgcttaactgcggagttcttatggaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagtcttccttcaa 162770  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | || ||| |||||| |||||||||||||||||||    
T  162771 ccatgcagtcacatacctgtacggcctcaggatccctctcattccgatgt 162820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 69814 - 69921
Alignment:
Q  230 taactgtggagttcttatagaatgagctaccgaaagaa-gatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatgg 328  Q
    |||||||||||||||||| ||||||||||  |||| || |||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||| || |||     
T  69814 taactgtggagttcttatggaatgagctaatgaaaaaaagatgcatcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgc 69913  T
Q  329 agtctcat 336  Q
    ||||||||    
T  69914 agtctcat 69921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 163224 - 163167
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgtt 280  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  163224 cacgcttaactgtggaattcttaaagaatgagctaccgaaaagaagatgcatcttgtt 163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 163127 - 163181
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 277  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  163127 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 163181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 1373 - 1215
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||  |||||| |    
T  1373 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagccttccttcaa 1274  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    ||||| |||| ||| | |||| | |||||| | || |||||||||| || ||||||||||    
T  1273 ccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtg-tgattcggtt 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 224 - 372
Target Start/End: Original strand, 2203 - 2352
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    ||||||||||| | |||||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |    
T  2203 cacgcttaactattgagttcttatggaataagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaa 2302  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||||| |||| ||| | |||||| ||| || |||| ||||||||||||||    
T  2303 ccatgtagtcccatacctgcacggccttaggatccttctcattccgatgt 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 382
Target Start/End: Complemental strand, 4710 - 4556
Alignment:
Q  228 cttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccat 326  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||| |  |||||| |||||    
T  4710 cttaactgtggagttcttataaaatgagctaccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccat 4611  T
Q  327 ggagtctcatgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    | |||| ||| | |||| | |||||| | ||||||| |||||||| ||||||||||    
T  4610 gcagtcccatacctgcatggcctcaggaaccctctccttccgatg-tgattcggtt 4556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 5174 - 5091
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattctt 306  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  5174 cacgcttaactgtggagttcttatgaaatgagctaccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattctt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 142306 - 142416
Alignment:
Q  262 aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctct 361  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||| |||| ||| | |||||| |||||| ||||||||    
T  142306 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctct 142405  T
Q  362 cattccgatgt 372  Q
    |||||||||||    
T  142406 cattccgatgt 142416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 368
Target Start/End: Complemental strand, 154910 - 154765
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||  |||||| |    
T  154910 cacgcttaactgtggagttcttatggaatgagctactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagccttccttcaa 154811  T
Q  323 ccatggagtctcatgcatgcacgacctcagaatccctctcattccg 368  Q
    ||||| |||| ||| | | || | |||||| | |||||||||||||    
T  154810 ccatgtagtcccatacctacaaggcctcaggagccctctcattccg 154765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 372
Target Start/End: Complemental strand, 245228 - 245090
Alignment:
Q  234 tgtggagttcttatagaatgagctaccgaaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtct 333  Q
    |||||||||||||| |  |  ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||   ||||| |||||| ||||     
T  245228 tgtggagttcttatggtttaggctaccgaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcc 245129  T
Q  334 catgcatgcacgacctcagaatccctctcattccgatgt 372  Q
    ||| | | || | |||||| |||||||||||||||||||    
T  245128 catacctacatggcctcaggatccctctcattccgatgt 245090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 224 - 332
Target Start/End: Complemental strand, 245668 - 245559
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttcta 322  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |    
T  245668 cacgcttaactgtggagttcttatggtttaggctactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaa 245569  T
Q  323 ccatggagtc 332  Q
    ||||| ||||    
T  245568 ccatgaagtc 245559  T

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Target: scaffold0389 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 13526 - 13592
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatcttgttgatataggt 289  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13526 cacgcttaactgtggagttcttatggaatgagctaccgaaaagaagatgcatcttgttgatataggt 13592  T

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Target: scaffold0664 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 242 - 366
Target Start/End: Original strand, 3993 - 4118
Alignment:
Q  242 tcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcat 340  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| || ||| |||| ||| | |    
T  3993 tcttataaaatgggctaccaaaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacct 4092  T
Q  341 gcacgacctcagaatccctctcattc 366  Q
    ||||| |||| | |||||||||||||    
T  4093 gcacggcctcgggatccctctcattc 4118  T

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Target: scaffold0088 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 264 - 382
Target Start/End: Complemental strand, 23785 - 23668
Alignment:
Q  264 agaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctcatgcatgcacgacctcagaatccctctca 363  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||  |||||| |||||| |||| ||| | |||||| |||||  | ||||||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctca 23686  T
Q  364 ttccgatgttgattcggtt 382  Q
    || || || ||||||||||    
T  23685 tttcggtg-tgattcggtt 23668  T

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Target: scaffold0557 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 2255 - 2154
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctacca 325  Q
    ||||||||||||||||||||  ||||| |||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||||  |||||| ||||    
T  2255 gcttaactgtggagttcttaaggaatgggctaccaaaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagccttccttcaacca 2156  T
Q  326 tg 327  Q
    ||    
T  2155 tg 2154  T

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Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 14891 - 14797
Alignment:
Q  227 gcttaactgtggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttc 320  Q
    ||||||||||| |||||||||  |||||  |||||||| || |||||||||| |||||||||||  || ||||||||||||||||||| ||||||    
T  14891 gcttaactgtgaagttcttattcaatgaattaccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttataagcattccttc 14797  T

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Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 14695 - 14749
Alignment:
Q  224 cacgcttaactgtggagttcttatagaatgagctaccg-aaagaagatgcatctt 277  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  14695 cacgcttaactgtggagttcttatggaatgagctaccgaaaacaagatgcatctt 14749  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 382
Target Start/End: Complemental strand, 26211 - 26064
Alignment:
Q  236 tggagttcttatagaatgagctaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagcactccttctaccatggagtctc 334  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| || ||| |||| ||||  |||||||  |  | | |||||| ||||||    
T  26211 tggagttcttataaaatgagctaccaaaaagaagatgcatcatgttgatatatgtagtaccaaaaaatttgtataagccattatgcaaccatgaagtctc 26112  T
Q  335 atgcatgcacgacctcagaatccctctcattccgatgttgattcggtt 382  Q
    |  | |||||| ||| || ||||||||| ||| |||||  ||||||||    
T  26111 acacctgcacggccttaggatccctctctttctgatgtaaattcggtt 26064  T

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