View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12419_high_36 (Length: 276)
Name: NF12419_high_36
Description: NF12419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12419_high_36 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 2830141 - 2829883
Alignment:
| Q |
11 |
gaacctgtgagcacaattgcgtcattgaagaaggaagcggaacattcgcttaacgagctaagtaaaatgagaaatttcaaggaagaaaaagaagaagagg |
110 |
Q |
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| T |
2830141 |
gaacttgtgagcacaattgcgtcattgaagaaggaagcggaacattcgcttaacgagctaagtaaaatgagaaatttcaaggaagaaaaagaagaagagg |
2830042 |
T |
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| Q |
111 |
ctagactattgaagtctgagttggaagctattagagttcaatgcagtgatttgaaaaagtcactttttgaggatgaggctgagaaagaaaaactaagaaa |
210 |
Q |
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| T |
2830041 |
ctagactattgaagtctgagttggaagctattagagttcaatgcagtgatttgaaaaagtcactttttgaggatgaggctgagaaagaaaaactaagaaa |
2829942 |
T |
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| Q |
211 |
gcaaatttcccagctaaagagtgaaataaagaagaaaggtgatgcattaaccagcattg |
269 |
Q |
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| T |
2829941 |
gcaaatttcccagctaaagagtgaaataaagaagaaaggtgatgcattaaccagcattg |
2829883 |
T |
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