View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12419_low_4 (Length: 697)
Name: NF12419_low_4
Description: NF12419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12419_low_4 |
 | |
|
| [»] scaffold0425 (3 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 657; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 657; E-Value: 0
Query Start/End: Original strand, 11 - 679
Target Start/End: Complemental strand, 35141642 - 35140974
Alignment:
| Q |
11 |
gaacctgtgatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatt |
110 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141642 |
gaaccagtgatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatt |
35141543 |
T |
|
| Q |
111 |
tggctgaagagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141542 |
tggctgaagagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttc |
35141443 |
T |
|
| Q |
211 |
ttatctttcaaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaact |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141442 |
ttatctttcaaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaact |
35141343 |
T |
|
| Q |
311 |
acttaatatcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcatttcttaatatgtgtg |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141342 |
gcttaatatcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcatttcttaatatgtgtg |
35141243 |
T |
|
| Q |
411 |
cctttcaaattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattat |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141242 |
cctttcaaattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcggtttaaaacattcttccagtaagagcgtatgcaaattat |
35141143 |
T |
|
| Q |
511 |
acaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctga |
610 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141142 |
acaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctga |
35141043 |
T |
|
| Q |
611 |
gagattgcaacaagagaaagacaacatccgcaaatatttagtcttgaaaacaaactctgatgcacgttg |
679 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141042 |
gagattgcaacaagagaaagacaacatccgcaaatatttagtcttgaaaacaaactctgatgcacgttg |
35140974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 464; Significance: 0; HSPs: 37)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 19 - 649
Target Start/End: Original strand, 6141050 - 6141681
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6141050 |
gatactaaattgggtagatgatgatccccaagccaattaggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggttgaa |
6141149 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| |||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6141150 |
gagcctccaagaccgagacacgtgcttctgttactgagccatccatttctctccattcatcgtacgacaaacttaattcttctaaatgtttcttatcttt |
6141249 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||||||| |||| ||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
6141250 |
caaatttgctgccatagcatctgctagatcagaaacatttttcaaccctgaaatttgaagccttcctttaaggtggttgagttctgccaactgcttaata |
6141349 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6141350 |
tcaaatccatgttgctctcctacaataaaatcagtcagcatctcaggattgattaaccctcttatctcctttggcatcttcttaatatgtgtgcctttca |
6141449 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
|||||||||||| |||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||| | | |
|
|
| T |
6141450 |
aattaagatgacgtaaattgacgagtttgcaaaaatttgatgggagctcagtcaatttaaaacattcttccagtaagagggtatgcaaattatacagctt |
6141549 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||| |||||||| |
|
|
| T |
6141550 |
acaaatggaattaggtaagcttgtaatctccgtgtaagaaaggtctagatagcgcagaagctttaaatttcttatctcatcagctagctctaagagattg |
6141649 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaatattt |
649 |
Q |
| |
|
|||| | |||||||||||||||||||||||| |
|
|
| T |
6141650 |
caaccattgaaagacaacatccgcaaatattt |
6141681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 19 - 675
Target Start/End: Original strand, 6257966 - 6258624
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
||||||||||| |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
6257966 |
gatactaaatttggtagattaagatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctattaggttgaa |
6258065 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| |||||| || || |||| |||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
6258066 |
gagcctccaagaccgatacacgtgcttcagtttctgagccatccatttctctccattcatcatacgacaaacttaattcttctaaatgtttcttctcttt |
6258165 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||||||| || | |||||||| ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
6258166 |
caaatttgctgccatagcaactgctggatccgccacgtttttcaaccctgaaattcgaagccttcctttaaggtggttgagttctgccaactgcttaata |
6258265 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||| |||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
6258266 |
tcatatccatgttgctcttccacaacaaaatcagtcagcatctcaagattgattaattctcttatcttctttggcatcttcttaatatgcgtgcctttca |
6258365 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6258366 |
aattaagatgacataaattgatgagattgtgaaaatttgatgggagctcagtcagtttaaaacattcttccagtaagagtgtatgcaaattatacaacat |
6258465 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||| |
|
|
| T |
6258466 |
acaaatggaatcaggtaaacttgtaatctcggtgtaagaaaggtctagatagcgcagaagctttaagtttcttatctcatcagctagctctaagagattg |
6258565 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaactctgatgcac |
675 |
Q |
| |
|
|||| |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
6258566 |
caaccagagaaagacaatatccgcaaatattttagtcttgaaaacaaactctgctgcac |
6258624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 34 - 664
Target Start/End: Original strand, 6244072 - 6244704
Alignment:
| Q |
34 |
aaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaagagactccaacactg |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||| | | |
|
|
| T |
6244072 |
aaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcacgaggttactatttggttgaagagcctccaagatag |
6244171 |
T |
|
| Q |
134 |
agacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatctttcaaatttgctgccat |
233 |
Q |
| |
|
||||| |||||| ||| ||||| |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6244172 |
agacatgtgcttcagtttctgagtcatctatttctctccattcatcgtacgacaaacttaattcttctaaatgtttcttatctttcaaatttgctgccat |
6244271 |
T |
|
| Q |
234 |
aacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaatatcaaatccatgttgc |
333 |
Q |
| |
|
| |||| |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | ||| |
|
|
| T |
6244272 |
agcatctgctggatcagccacatttttcaaccctgaaattcgaagtcttcctctaaggtggttgagttctgccaactgcttaatatcaaatccacgctgc |
6244371 |
T |
|
| Q |
334 |
tctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttcaaattaagatgacata |
432 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || |
|
|
| T |
6244372 |
tctcccacaataaaatcagtcagcatctcaaggttgattaaccctctcatctcctttggcatcttcttaatatgggtgcctttcaaattaagatgacgta |
6244471 |
T |
|
| Q |
433 |
aattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaaatggaattagg |
532 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6244472 |
aattgatgagtttgcaaaaatttggcgggagctcaagtagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaaatggaattagg |
6244571 |
T |
|
| Q |
533 |
taagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaacaagagaaagac |
632 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| | |||||| |
|
|
| T |
6244572 |
taagcttgtaatctcggtgtaagaaaggtctagatagcgcagaagctttaagtttcttatctcatcagctagctctgagagattgcaaccattgaaagat |
6244671 |
T |
|
| Q |
633 |
aacatccgcaaatatt-tagtcttgaaaacaaa |
664 |
Q |
| |
|
||| |||| ||||||| || ||||||| ||||| |
|
|
| T |
6244672 |
aacttccgtaaatattgtactcttgaatacaaa |
6244704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 19 - 664
Target Start/End: Complemental strand, 13271818 - 13271171
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| |
|
|
| T |
13271818 |
gatactaaattgggtagatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagtctcatgaggtgtctatttggttgaa |
13271719 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| ||||| || ||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13271718 |
gagcttccaagaccgagacacgtgcttcagttactaagccatccatttctctccattcatcatacgacaaacttaattcttctaaatgtttcttatcttt |
13271619 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||||||| |||| ||||||| |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
13271618 |
caaatttgctgccatagcatctgctggatgagccacatttttcaatcctgaaatttgaagccttcctttaaggtggttgagttctgccaactgcttaata |
13271519 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| | || |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
13271518 |
tcatatccatgttgctctcccacaacaaaatcagtcagcatctcaagattgattaattcacttatctcctttggcatcttcttaatatgcgtgcctttca |
13271419 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
13271418 |
aattaagatgacgtaaattgatgagtttgcaaaaatttggcgggagctcaagtagtttaaaacattctttcagcaagagcgtatgcaaattatacaacat |
13271319 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
13271318 |
acaaatggaatcaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcagaagctttaagtttcttatctcatcagctagctctgagagattg |
13271219 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaatatt-tagtcttgaaaacaaa |
664 |
Q |
| |
|
|||| |||||| |||||||| ||||||| |||||||||| ||||| |
|
|
| T |
13271218 |
caacctttgaaagataacatccgtaaatattgtagtcttgaatacaaa |
13271171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 36 - 664
Target Start/End: Original strand, 6264466 - 6265096
Alignment:
| Q |
36 |
atgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaagagactccaacactgag |
135 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| | |||| |||||| || ||| |
|
|
| T |
6264466 |
atgatgatccccaagccaattaggaaagctactacctctgtagtcattgatgctgagcctcgtgagatttctatttggtcgcagagcctccaagaccgag |
6264565 |
T |
|
| Q |
136 |
acacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatctttcaaatttgctgccataa |
235 |
Q |
| |
|
| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6264566 |
aaacatgcttcagttactgagccatccatttctctccattcatcatacgacaaacttaattcttctaaatgtttcttatgtttcaaatttgctgccatag |
6264665 |
T |
|
| Q |
236 |
catcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaatatcaaatccatgttgctc |
335 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
6264666 |
catctgctggatcagccacatttttcaaccctgaaatttgaagccttcctttaaggtggttgagttctgccaactgcttaatatcaaatccatgttgctc |
6264765 |
T |
|
| Q |
336 |
tcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttcaaattaagatgacataaa |
434 |
Q |
| |
|
|||||||| |||||| ||| |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6264766 |
tcccacaacaaaatcggtcagcatctcaaggtttattaaccctctcatctcctttggcatcttcttaatatgtgtgcctttcaaattaagatgacgtaaa |
6264865 |
T |
|
| Q |
435 |
ttgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaaatggaattaggta |
534 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||||| |
|
|
| T |
6264866 |
ttgacgagtttgcaaaaatttgatgggagctcagtcaatttaaaacattcttccagtaagagggtatgcaaactatacagcttacaaatggaattaggta |
6264965 |
T |
|
| Q |
535 |
agcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaacaagagaaagacaa |
634 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
6264966 |
agcttgtaatctctgtgtaagaaaggtctagatagcgcagaagctttaaatttcttatctcatcagctagctctaagagattgcaacccgagaaagacaa |
6265065 |
T |
|
| Q |
635 |
catccgcaaata-tttagtcttgaaaacaaa |
664 |
Q |
| |
|
||| |||||||| ||||||||| |||||||| |
|
|
| T |
6265066 |
cattcgcaaatattttagtcttaaaaacaaa |
6265096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 19 - 649
Target Start/End: Original strand, 6167655 - 6168286
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
6167655 |
gatactaaattgggtagatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgagatttctatttggttgaa |
6167754 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| |||||| || ||| || |||||| ||| ||||||| || ||||||||||||||||| || |||| ||||||||| |||||||||||||||||| |
|
|
| T |
6167755 |
gagcctccaagaccaagagacgtgcttcagtttctgagccttccatttctctccattcatcgtatgacatgattaattcttgtaaatgtttcttatcttt |
6167854 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||||||| |||| |||||||| | | |||| ||||||||||||||| |||||||||||| ||||||||| |||||| ||||| ||||||| |
|
|
| T |
6167855 |
caaatttgctgccatagcatctgctggatcggtcacattcttcaaccctgaaatttgaagccttcctttaaggtggttaagttcttccaacagcttaata |
6167954 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
6167955 |
tcatatccatgttgctctcccacaacaaaatcagtcagcatctcaagattgattaatactcttatctcctttggcatcttcttgatatgtgtgcctttca |
6168054 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6168055 |
aattaagatgacgtaaattgatgagtttgccaaaatttgatgggagctcagtcaatttaaaacattcttccagtaagagcgtatgcaaattatacagcat |
6168154 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||||| |||| |||||| |||||||||||| |||||||| |
|
|
| T |
6168155 |
acaaatggaattaggtaagcttgtaatgtcggtgtaagaaaggtctagatatcgtagaagctttaaatttcttatctcatcagctagctctaagagattg |
6168254 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaatattt |
649 |
Q |
| |
|
|||| | |||||||||| | ||||||||||| |
|
|
| T |
6168255 |
caaccattgaaagacaaccttcgcaaatattt |
6168286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 151 - 649
Target Start/End: Original strand, 6237650 - 6238151
Alignment:
| Q |
151 |
actgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatctttcaaatttgctgccataacatcagctggatcag |
250 |
Q |
| |
|
||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
6237650 |
actgagccatccatttctctcaattcatcgtacgacaaacttaattcttctaaatgtttcttatctttcaaatttgctgccatagcatctgctggatcag |
6237749 |
T |
|
| Q |
251 |
ccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaatatcaaatccatgttgctctcccacaataaaatc |
350 |
Q |
| |
|
| ||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
6237750 |
caacattta-caaccctgaaatttgaagccttcctttaaggtggttgacttctgccaactgcttaatatcatatccatgttgctctcccacaacaaaatc |
6237848 |
T |
|
| Q |
351 |
agtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttcaaattaagatgacataaattgatgagtttgcga |
449 |
Q |
| |
|
|||| | ||||||||||||| ||| ||| |||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||| ||||||| | |
|
|
| T |
6237849 |
agtcagaatctcaagattgaataattctcgtatctcctttggcatcttcttaatatgcgttcctttcaaattaagatgacgtaaattgataagtttgcaa |
6237948 |
T |
|
| Q |
450 |
aaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcgg |
549 |
Q |
| |
|
|||||||||||||||| | ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | |
|
|
| T |
6237949 |
aaatttgatgggagcttagtcaatttaaaacattcttccggtaagagcgtatgcaaattatacaacatgcaaatggaattaggtaagcttgtaatttcag |
6238048 |
T |
|
| Q |
550 |
tgtaagaaaggtctagatagcgcataagctttaagtttcctatc---tcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaata |
646 |
Q |
| |
|
||||||||||||||||||||| || ||||||||| |||| |||| || |||||||||||| | |||||| ||| ||||| |||||||||||||||||| |
|
|
| T |
6238049 |
tgtaagaaaggtctagatagcacaaaagctttaaatttcttatcagatcatcagctagctctaaaagattggaaccagagatagacaacatccgcaaata |
6238148 |
T |
|
| Q |
647 |
ttt |
649 |
Q |
| |
|
||| |
|
|
| T |
6238149 |
ttt |
6238151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 19 - 664
Target Start/End: Original strand, 6898852 - 6899499
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
6898852 |
gatactaaattgggtaaatgatgaaccccaagccaatttggaaatctactgcctctgtagtctttgatggttagcctcatgaggtttatatttggttgaa |
6898951 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| ||| || || ||||||| ||||| |||||||| ||||| |||| | |||| ||||| || |||| ||||||||||||||| |||| || ||||| |
|
|
| T |
6898952 |
gagcctctaagacagagacacgtgctttagttactgatccatccatttttatccaatcatcgtatgacagacttaattcttctaactgttctttgtcttt |
6899051 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
||||| |||||| | | ||| || ||||| | |||| ||||||||||||| |||||||||||| ||| |||||||||| |||||| ||||||| |
|
|
| T |
6899052 |
caaatatgctgctacagcatatgcaggatctttgacgttttccaaccctgaaatttgaagccttccttgaagttggttgagtttccccaactgcttaata |
6899151 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
|||||| || | ||||||||||||| |||||||||| |||||||||||||| ||||||||| |||| | ||||||| ||| | ||||| ||||||| || |
|
|
| T |
6899152 |
tcaaattcacgctgctctcccacaacaaaatcagtcagcatctcaagattgtttaaccctcctatcttcattggcatcttcattatatgagtgccttgca |
6899251 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
||||||||||| || ||||| |||||||| ||||| ||| ||||||||| ||||||||||||| ||| ||||||||| || ||||||||||||| ||| |
|
|
| T |
6899252 |
gattaagatgacgtagattgacgagtttgcaaaaatctgaagggagctcagtcagtttaaaacaaccttgcagtaagagtgtctgcaaattatacagcat |
6899351 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||| ||||||| |
|
|
| T |
6899352 |
acaaatggaatcaggtaagcttgcaatctcggtgtaagaaaggtctagatagcgcagaagctttaaatttcttatctcatcagctagctctatgagattg |
6899451 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaa |
664 |
Q |
| |
|
|||| |||||||||||||| ||||||||| |||| ||||||||||||| |
|
|
| T |
6899452 |
caaccagagaaagacaacacccgcaaatattttactcttgaaaacaaa |
6899499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 22 - 664
Target Start/End: Original strand, 7748769 - 7749413
Alignment:
| Q |
22 |
actaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaagag |
121 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| || |||| |
|
|
| T |
7748769 |
actaaattgggtaaatgataatcgccaagccaatttggaaagctactgcctctgtagtctttgatggttagcctcatgaggtttctatttggttggagag |
7748868 |
T |
|
| Q |
122 |
actccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatctttcaa |
221 |
Q |
| |
|
||| || || |||||| |||||| |||||||| ||||| |||||||||||||||||||| || || ||||||||||||||||||| ||||||| ||| |
|
|
| T |
7748869 |
cctctaagacagagacatgtgcttcagttactgatccatccatttctctccattcatcatatgatacgcttaattcttctaaatgttctttatcttccaa |
7748968 |
T |
|
| Q |
222 |
atttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaatatca |
321 |
Q |
| |
|
||||||||||| | ||||||| ||||| |||| ||||||||||||||| ||||||||| || ||| ||||||||||| ||||||| ||||| ||| |
|
|
| T |
7748969 |
atttgctgccacagcatcagcgggatcgatgacattattcaaccctgaaatttgaagccttcgttgaagatggttgagttccgccaactgtttaatgtca |
7749068 |
T |
|
| Q |
322 |
aatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttcaaat |
420 |
Q |
| |
|
|||||| | ||||||||||||| |||||||||| ||||||||| ||| |||||| || || | | |||||| ||||||||||| ||||| || | || |
|
|
| T |
7749069 |
aatccacgctgctctcccacaacaaaatcagtcagcatctcaatattttttaacctacttatattcggtggcatcttcttaatatgagtgccgtttagat |
7749168 |
T |
|
| Q |
421 |
taagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacataca |
520 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||| || |||||| || | | ||||||| ||||| ||||| || ||||||||||||| |||||| |
|
|
| T |
7749169 |
taagatgacgtaaattgatgagtttgcaaaaatctgaaggcagctcagccaatctgaaacattgttccaacaagagtgtctgcaaattatacagcataca |
7749268 |
T |
|
| Q |
521 |
aatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaa |
620 |
Q |
| |
|
||||||||| |||||||||| |||||| |||| |||||||||||||||||||| ||||||||| |||| |||||| || ||||||||| |||||||||| |
|
|
| T |
7749269 |
aatggaattgggtaagcttgcaatctcagtgtgagaaaggtctagatagcgcagaagctttaaatttcttatctcatcggctagctctacgagattgcaa |
7749368 |
T |
|
| Q |
621 |
caagagaaagacaacatccgcaaata-tttagtcttgaaaacaaa |
664 |
Q |
| |
|
| ||||| ||||||| | ||||||| |||||||||||||||||| |
|
|
| T |
7749369 |
ccagagagggacaacacctgcaaatattttagtcttgaaaacaaa |
7749413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 664
Target Start/End: Complemental strand, 6592618 - 6591971
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||| |||||||||| | |||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6592618 |
gatactaacttgggtaaataaagatcgccaagccaatttggaaagcttctgcctctgtagtctttgatggtgagcctcatgaggtttctatttggttgaa |
6592519 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
|| ||||| || ||| || ||| || |||| ||||||||| |||| | || | |||||| |||| ||||||||||| |||||||||||||||||| |
|
|
| T |
6592518 |
gaatctccatgacagaggcatgtgcctcagttattgagccatccattttttgacaataatcatatgacatacttaattcttttaaatgtttcttatcttt |
6592419 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||| ||| |||| ||| ||||| |||||| || ||||||||||||||| ||||||| ||| ||||| |||| | |||||| ||||||| |
|
|
| T |
6592418 |
caaatttgctgcaatagcatctgctagatcaatgacattttccatccctgaaattcgaaggcttccttgaagttggtttagttttcccaactgcttaata |
6592319 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||||| ||| | ||||||||||||| |||||||||| |||| ||||||||| |||||||| | || ||||||| ||||||||||| |||||||||| |
|
|
| T |
6592318 |
tcaaacccacgctgctctcccacaacaaaatcagtcagcatttcaagattgtttaacccttcgagctttgttggcatcttcttaatatgagtgcctttca |
6592219 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||| ||| ||||| || ||| ||||||||||||||||| ||||| || ||||||||||||| | | |
|
|
| T |
6592218 |
gattaagatggcgcaaattgatgagtttgtgaaaatctgaagggagttcggtcaatttaaaacattcttccaataagaatgtttgcaaattatacagcgt |
6592119 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||||||||||||||||||||| |||||| || | |||||||||||||||||||| ||||||||| |||| |||||| ||| |||||| | ||||||| |
|
|
| T |
6592118 |
acaaatggaattaggtaagcttgcaatctcagttttagaaaggtctagatagcgcagaagctttaaatttcttatctcatcatctagctttacgagattg |
6592019 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaa |
664 |
Q |
| |
|
|||| ||| | ||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
6592018 |
caaccagaaagggacaacatccgcaaatattttattcttgaaaacaaa |
6591971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 19 - 664
Target Start/End: Original strand, 6915865 - 6916512
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
||||||||||| |||||||||| ||| |||||||||| |||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
6915865 |
gatactaaatttggtaaatgataatctccaagccaatatggaaagctactgcctccatagtctttgatggtgagcctcatgagatttctatttggttgaa |
6915964 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| |||||| | |||| |||||| |||||||| || || ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| |
|
|
| T |
6915965 |
gagcctccaagatagagatttgtgcttcagttactgacagattcatatctctccattcatcatatgacaaacttagttcttctaaatgtttcttatcttt |
6916064 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||||| | |||| || |||||| |||||||||||||||||||| | |||||||||| || | |||||||| ||||||| ||||||| |
|
|
| T |
6916065 |
caaatttgctgccacagcatctgcaggatcaatgacatttttcaaccctgaaatttggagccttccttgaatataattgagttccgccaactgcttaata |
6916164 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||| ||||| | ||| ||||||| |||||||||| |||||||||||||| ||||||||| || | ||||||| ||||||||||| |||||||||| |
|
|
| T |
6916165 |
tcagatccacacttctcccccacaacaaaatcagtcagcatctcaagattgtttaaccctcctatttttgttggcatcttcttaatatgagtgcctttca |
6916264 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
||||||||| | ||| |||| |||||||| ||||| | | ||||||||| ||| ||| |||||||||||| |||||| || || |||||||| | ||| |
|
|
| T |
6916265 |
gattaagatggcgtaagttgacgagtttgccaaaatctaaagggagctcagtcaatttccaacattcttccaataagagtgtctgtaaattatatatcat |
6916364 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||| |||| | ||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||| |||| |||||| || |||||||| |||||| || |
|
|
| T |
6916365 |
acaaacggaaatcggtaagcttgtaatctcagtgtacgaaagatctagatagcgcagaagctttaaatttcttatctcatctgctagctccgagagactg |
6916464 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaatatt-tagtcttgaaaacaaa |
664 |
Q |
| |
|
|||| | |||||| |||||||||||||||| |||||||||| ||||| |
|
|
| T |
6916465 |
caaccatggaaagataacatccgcaaatattgtagtcttgaatacaaa |
6916512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 664
Target Start/End: Original strand, 6881280 - 6881927
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||||| || ||| |||||||| ||||||| |||| |
|
|
| T |
6881280 |
gatactaaatttggtaaatgacgatccccaagccagtttggaaagctaccgcctctgtagtctttgatggttagactcgtgaggtttatatttggttgaa |
6881379 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| |||||| || ||| | |||||| |||||||| ||||| |||||||||||||||| || |||| |||||| ||||||||||||| ||||||| |
|
|
| T |
6881380 |
gagcctccaagacagaggcttgtgcttcagttactgatccatccatttctctccattcattgtatgacatacttaaatcttctaaatgttctttatcttc |
6881479 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||||||||||| | ||| || |||||| |||||| ||||||||||||| ||||| |||| | ||| |||||||||| ||||| |||||| |
|
|
| T |
6881480 |
caaatttgctgccacagcatgtgcaggatcattgacattttccaaccctgaaatttgaagctttccatgaagttggttgagtttccccaacattttaata |
6881579 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||||||||| | ||||||||||||| |||||||||| |||||||||||||| |||||| | |||| ||||||| ||||||||||| |||||| ||| |
|
|
| T |
6881580 |
tcaaatccacgctgctctcccacaacaaaatcagtcagcatctcaagattgtttaaccgttctatctttgttggcatcttcttaatatgagtgcctgtca |
6881679 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
||||||||||| |||| ||||||| |||| ||||| || ||| || |||| || ||| ||||||||||||| |||||| || || |||||||||||||| |
|
|
| T |
6881680 |
gattaagatgacgtaaactgatgagcttgcaaaaatctgttggaagttcaagcaatttgaaacattcttccaataagagtgtctgtaaattatacaacat |
6881779 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| |||||||| |||||||||| ||||||||| |||| |||| | ||| ||||| | |||| ||| |
|
|
| T |
6881780 |
acaaatggaattaggtaagcttgcaatctcagtgtgcgaaaggtccagatagcgcagaagctttaaatttcttatcccatcatctagcagtaagaggttg |
6881879 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgc-aaatatttagtcttgaaaacaaa |
664 |
Q |
| |
|
|||| |||||| |||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
6881880 |
caaccagagaaggacaacatccgcaaaagttttactcttgaaaacaaa |
6881927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 19 - 664
Target Start/End: Complemental strand, 6723344 - 6722697
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
6723344 |
gatactaaattgggtaaatgacgatacccaacccaatttggaaagctactgcctccatagtctttgatggtgagcctcatgaggtttttatttggttgaa |
6723245 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| |||||| || |||||| ||||| |||||||| |||| |||| ||||||| ||||||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
6723244 |
gagcctccaagacagagacatctgctttagttactgatccattcatttttctccatccatcatatgacatacttaattcttctaaatgttctttatcttc |
6723145 |
T |
|
| Q |
219 |
caaatttgctgccataacatcagctggatcagccgcatttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaata |
318 |
Q |
| |
|
|||||| ||||||| | ||| || | | |||||| |||||| |||||| |||||||||||| ||| |||||||||| |||||| ||||||| |
|
|
| T |
6723144 |
caaattcgctgccacagcatgtgcagtttttttgacattttccaacccagaaatttgaagccttccttgaagttggttgagtttccccaactgcttaata |
6723045 |
T |
|
| Q |
319 |
tcaaatccatgttgctctcccacaataaaatcagtcggcatctcaagattgattaaccctctcatctcctttggcat-ttcttaatatgtgtgcctttca |
417 |
Q |
| |
|
||||||||| | |||| ||| |||| ||||||| || |||||||||| ||| ||| ||| |||| | ||||||| ||||||||||| |||||||||| |
|
|
| T |
6723044 |
tcaaatccacgctgctttccgacaaaaaaatcactcagcatctcaagcttgtctaatgctcctatcttcgttggcatcttcttaatatgagtgcctttca |
6722945 |
T |
|
| Q |
418 |
aattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacat |
517 |
Q |
| |
|
|||||||| || |||||||| ||||||| | || ||| || |||| | ||| |||||| || ||||||| |||||| || ||||||||||| | ||| |
|
|
| T |
6722944 |
gattaagataacgtaaattgacgagtttgtagatatctgaaggtagcttagtcaatttaaagcactcttccaataagagtgtctgcaaattatatagcat |
6722845 |
T |
|
| Q |
518 |
acaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattg |
617 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||||| ||||||||||||||||||| ||||||||| || | |||||| || | ||||||| |||| ||| |
|
|
| T |
6722844 |
acaaatggaattaggtaagcttacaatgtcagtgtaggaaaggtctagatagcgcaaaagctttaaattccttatctcatcggatagctctaagaggttg |
6722745 |
T |
|
| Q |
618 |
caacaagagaaagacaacatccgcaaata-tttagtcttgaaaacaaa |
664 |
Q |
| |
|
|||| ||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
6722744 |
caaccagagaaagacagcatccgcaaatattttagtcttgaaaacaaa |
6722697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 6236489 - 6236626
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| |
|
|
| T |
6236489 |
gatactaaattgggtagatgatgatccccaagccaattaggaaagctactacctctgtagtcattgatgccgagcctcatgagatttctatttggtcgaa |
6236588 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgag |
156 |
Q |
| |
|
||| |||||| | ||||||| ||||| ||||||||| |
|
|
| T |
6236589 |
gagcctccaagatcgagacacgtgctttagttactgag |
6236626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 6850545 - 6850333
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttggctgaa |
118 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| ||| |||||||| |||| |||||| |||||||| |||||||||||||||| |||||| |||| |
|
|
| T |
6850545 |
gatactaaattgggtaaatgataatccccgagccaatatgggaagctactgcctcggtagtctttgatggttagcctcatgaggtttccatttggttgaa |
6850446 |
T |
|
| Q |
119 |
gagactccaacactgagacacatgcttctgttactgagccatcgatttctctccattcatcatacgacacacttaattcttctaaatgtttcttatcttt |
218 |
Q |
| |
|
||| ||||| || ||||| | |||| ||||||| ||| ||||| ||| |||| || || |||| |||||||||||||||||||| ||||||| |
|
|
| T |
6850445 |
gagcttccaagacagagacttttacttccattactgatttatccatttc-ctctattcctcgtatgacatacttaattcttctaaatgttctttatcttc |
6850347 |
T |
|
| Q |
219 |
caaatttgctgcca |
232 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
6850346 |
caaatttgctgcca |
6850333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 616
Target Start/End: Original strand, 5279818 - 5280012
Alignment:
| Q |
419 |
attaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacata |
518 |
Q |
| |
|
||||||||||| |||||||| |||||| ||||||||| ||||||||| ||| | || ||| || || |||||| || |||||||||||||||| | |
|
|
| T |
5279818 |
attaagatgacgtaaattgacaagtttgtaaaaatttgaagggagctcagtcaatcta---catcctagcaataagagtgtctgcaaattatacaacaca |
5279914 |
T |
|
| Q |
519 |
caaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagatt |
616 |
Q |
| |
|
|||||||||| ||||| ||||||||| | |||||||||||||||||||| | || |||||||||||| | |||||| ||||||||||| |||||||| |
|
|
| T |
5279915 |
caaatggaatcaggtaggcttgtaattccagtgtaagaaaggtctagataacacagaagctttaagttgcttatctcgtcagctagctcggagagatt |
5280012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 422 - 615
Target Start/End: Complemental strand, 6555339 - 6555146
Alignment:
| Q |
422 |
aagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaa |
521 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| ||||||||| ||| || | |||| |||| | ||||| || ||||||||||||||||||||| |
|
|
| T |
6555339 |
aagatgacgtaaattgatgagtttggaaaaatttgaagggagctcagtcaattgataacagtcttttaacaagagtgtttgcaaattatacaacatacaa |
6555240 |
T |
|
| Q |
522 |
atggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagat |
615 |
Q |
| |
|
|||| || |||||||||| |||| | ||||| | |||||||||||| |||| ||| |||| ||||||||||| || | ||||||||||||| |
|
|
| T |
6555239 |
atggtatcaggtaagcttttaataccagtgtatgtaaggtctagataacgcaaaagttttagctttcctatctcatccacaagctctgagagat |
6555146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 422 - 621
Target Start/End: Original strand, 6735118 - 6735317
Alignment:
| Q |
422 |
aagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaa |
521 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||| ||||||||| ||| || | ||| ||| | ||||| || || |||||||||||||||||| |
|
|
| T |
6735118 |
aagatgacataaattgacgagtttggaaaaatttgaagggagctcagtcaattgacgacaaccttttaacaagagtgtttgtaaattatacaacatacaa |
6735217 |
T |
|
| Q |
522 |
atggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaac |
621 |
Q |
| |
|
|||| || |||||||||| |||||| ||||| |||||||||||||| |||| ||| ||||| || | |||||| || | ||||||||||||| ||||| |
|
|
| T |
6735218 |
atggtatcaggtaagcttctaatcttagtgtatgaaaggtctagataacgcaaaagttttaaattgcttatctcatccacaagctctgagagatagcaac |
6735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 422 - 614
Target Start/End: Complemental strand, 6480853 - 6480664
Alignment:
| Q |
422 |
aagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaa |
521 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| ||||||||| ||| || | | | ||| || |||| || ||||||||||||||||||||| |
|
|
| T |
6480853 |
aagatgacgtaaattgatgagtttggaaaaatttgaagggagctcagtcaattcacacc---cttgcaacaagattgtttgcaaattatacaacatacaa |
6480757 |
T |
|
| Q |
522 |
atggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagaga |
614 |
Q |
| |
|
||| || |||||||||||||||||| ||| |||||||||| |||||||||| ||| |||| || | |||||| ||| ||||||| |||||| |
|
|
| T |
6480756 |
atgctatcaggtaagcttgtaatctcagtgaaagaaaggtcaagatagcgcaaaagttttatattgcttatctcatcaactagctcagagaga |
6480664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 491 - 616
Target Start/End: Original strand, 5263011 - 5263135
Alignment:
| Q |
491 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
590 |
Q |
| |
|
|||||| || |||||||||||||||| | ||||||||| ||||| |||||||||| | |||||||||||||||||||| |||| |||| ||||||| | |
|
|
| T |
5263011 |
taagagtgtctgcaaattatacaacacataaatggaatcaggtaggcttgtaatcccagtgtaagaaaggtctagataacgcagaagc-ttaagttgctg |
5263109 |
T |
|
| Q |
591 |
atctcttcagctagctctgagagatt |
616 |
Q |
| |
|
||||| ||||||||||| |||||||| |
|
|
| T |
5263110 |
atctcgtcagctagctcggagagatt |
5263135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 491 - 614
Target Start/End: Original strand, 6946502 - 6946625
Alignment:
| Q |
491 |
taagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcct |
590 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| |||| ||||| |||||||| | |||| ||||||||||||||| |||| ||||||||| || | | |
|
|
| T |
6946502 |
taagagtgtttgcaaattatacaacatacaaatagaatcgggtaaccttgtaatattagtgtgagaaaggtctagataacgcaaaagctttaaattgctt |
6946601 |
T |
|
| Q |
591 |
atctcttcagctagctctgagaga |
614 |
Q |
| |
|
||||| ||| |||||||||||||| |
|
|
| T |
6946602 |
atctcatcaactagctctgagaga |
6946625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 504 - 614
Target Start/End: Original strand, 8588978 - 8589088
Alignment:
| Q |
504 |
aaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagcta |
603 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||| ||| ||||| || | |||||| | | ||| |
|
|
| T |
8588978 |
aaattatacaacatacaaatggtatcaggtaagcttgtaatcaaagtgtaagaaaggtctagataacgcaaaagttttaaattgcttatctcattaacta |
8589077 |
T |
|
| Q |
604 |
gctctgagaga |
614 |
Q |
| |
|
||||||||||| |
|
|
| T |
8589078 |
gctctgagaga |
8589088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 420 - 664
Target Start/End: Original strand, 8453813 - 8454058
Alignment:
| Q |
420 |
ttaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatac |
519 |
Q |
| |
|
|||||||||| |||||||| ||||||| ||||||||| |||||||| ||| || | |||| ||||||| ||||| || |||||||||| |||||||| |
|
|
| T |
8453813 |
ttaagatgacgtaaattgacgagtttggaaaaatttgaagggagctctgtcaattcacaacagccttccagcaagagtgtttgcaaattatgcaacatac |
8453912 |
T |
|
| Q |
520 |
aaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgca |
619 |
Q |
| |
|
|||||| || |||||| || |||| |||||||| ||||||||||| |||| ||| ||||| || | |||||| ||| |||| ||| ||||| ||| |
|
|
| T |
8453913 |
aaatggtatcaggtaatatttcaatccatgtgtaagagaggtctagataacgcaaaagttttaaattgcttatctcatcaactagttctaagagaccgca |
8454012 |
T |
|
| Q |
620 |
acaagagaaagacaacatccgc-aaatatttagtcttgaaaacaaa |
664 |
Q |
| |
|
|| || || ||||||||| ||| ||||||||||||||||||| |
|
|
| T |
8454013 |
acctctaaatgataacatccgcaaaaaatttagtcttgaaaacaaa |
8454058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 422 - 614
Target Start/End: Complemental strand, 6521033 - 6520841
Alignment:
| Q |
422 |
aagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaa |
521 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| ||||||||| ||| || | || ||| | ||||| || || |||||||||| ||||||| |
|
|
| T |
6521033 |
aagatgacgtaaattgatgagtttggaaaaatttgaagggagctcagtcaattgatggcagccttttaacaagagtgtttgtaaattatacagcatacaa |
6520934 |
T |
|
| Q |
522 |
atggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagaga |
614 |
Q |
| |
|
|||| || ||||||||||| ||||| ||||||||||||||||||| |||| ||| ||||| || | |||||| || | |||||||||||| |
|
|
| T |
6520933 |
atggtatcaggtaagcttgcaatcttattgtaagaaaggtctagataacgcaaaagttttaaattgcttatctcatccacaagctctgagaga |
6520841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 526 - 583
Target Start/End: Original strand, 6850245 - 6850302
Alignment:
| Q |
526 |
aattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaa |
583 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6850245 |
aattaggtatgcttgtaatctcagtgtaagaaaggtctagatagcgcagaagctttaa |
6850302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 583
Target Start/End: Complemental strand, 8569872 - 8569670
Alignment:
| Q |
382 |
atctcctttggcat-ttcttaatatgtgtgcctttcaaattaagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaac |
480 |
Q |
| |
|
|||| ||||||||| |||||||||| |||||||| | ||||||||| | ||||||| |||||| ||||| ||| ||||||| ||| || | ||| |
|
|
| T |
8569872 |
atctgctttggcatcttcttaatatcagtgccttttagattaagatggcgtaaattggcaagtttgtaaaaatatgaagggagcttggtcaattcagaac |
8569773 |
T |
|
| Q |
481 |
attcttccagtaagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctt |
580 |
Q |
| |
|
||||||||| || || || || |||||||||||| |||||||||||| ||| || ||| ||||||| ||| || || ||||||||||||| |||||| |
|
|
| T |
8569772 |
attcttccaatattagtgtttgtaaattatacaacttacaaatggaatcaggcaaccttttaatctctgtgcgagtcagatctagatagcgcaaaagctt |
8569673 |
T |
|
| Q |
581 |
taa |
583 |
Q |
| |
|
||| |
|
|
| T |
8569672 |
taa |
8569670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 354
Target Start/End: Original strand, 5297723 - 5297823
Alignment:
| Q |
254 |
catttttcaaccctgaaattcgaagccttccttcaaggtggttgagttctgccaactacttaatatcaaatccatgttgctctcccacaataaaatcagt |
353 |
Q |
| |
|
|||||| |||||||||||| ||||| | |||| ||| |||||||||| |||||||| ||||||||| | || | ||| |||||||||| ||||||||| |
|
|
| T |
5297723 |
cattttccaaccctgaaatacgaagtgtaccttgaagatggttgagttttgccaactcattaatatcagaccctttttggtctcccacaacaaaatcagt |
5297822 |
T |
|
| Q |
354 |
c |
354 |
Q |
| |
|
| |
|
|
| T |
5297823 |
c |
5297823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 6795729 - 6795692
Alignment:
| Q |
191 |
ttaattcttctaaatgtttcttatctttcaaatttgct |
228 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6795729 |
ttaattcttctacatgtttcttatctttcaaatttgct |
6795692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 7586792 - 7586829
Alignment:
| Q |
191 |
ttaattcttctaaatgtttcttatctttcaaatttgct |
228 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7586792 |
ttaattcttctacatgtttcttatctttcaaatttgct |
7586829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 8470487 - 8470524
Alignment:
| Q |
191 |
ttaattcttctaaatgtttcttatctttcaaatttgct |
228 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8470487 |
ttaattcttctacatgtttcttatctttcaaatttgct |
8470524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 544
Target Start/End: Complemental strand, 6449598 - 6449546
Alignment:
| Q |
492 |
aagagcgtatgcaaattatacaacatacaaatggaattaggtaagcttgtaat |
544 |
Q |
| |
|
||||| || |||||||||||||||| |||||||| || ||||||||||||||| |
|
|
| T |
6449598 |
aagagtgtttgcaaattatacaacacacaaatggtatcaggtaagcttgtaat |
6449546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 606
Target Start/End: Original strand, 5297970 - 5298073
Alignment:
| Q |
503 |
caaattatacaacatacaaatggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagct |
602 |
Q |
| |
|
||||||||||||| | || ||||||| |||||||||||| | | |||| |||||| || ||||| |||| |||||||||||| | |||||| || ||| |
|
|
| T |
5297970 |
caaattatacaacgtgcagatggaatcaggtaagcttgttagcccggttcgagaaagatcaagataacgcagaagctttaagttgcttatctcatcggct |
5298069 |
T |
|
| Q |
603 |
agct |
606 |
Q |
| |
|
|||| |
|
|
| T |
5298070 |
agct |
5298073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 5279423 - 5279517
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagtcattgatggtgagcctcatgaggtttctatttgg |
113 |
Q |
| |
|
|||||||||||| |||||| | ||||||||||||| |||||||| | | ||||||||||| | |||| |||| || ||||||| |||||||| |
|
|
| T |
5279423 |
gatactaaattgagtaaataacagtccccaagccaatgtggaaagccagtgcctctgtagtcctcgatgatgagactattgaggttgctatttgg |
5279517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 467
Target Start/End: Complemental strand, 6527773 - 6527728
Alignment:
| Q |
422 |
aagatgacataaattgatgagtttgcgaaaatttgatgggagctca |
467 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
6527773 |
aagatgacgtaaattgatgagtttggaaaaatttgaagggagctca |
6527728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 551 - 615
Target Start/End: Complemental strand, 6527682 - 6527618
Alignment:
| Q |
551 |
gtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagat |
615 |
Q |
| |
|
||||||||||||||| || |||| ||| |||||||||| |||||| || | ||||||||||||| |
|
|
| T |
6527682 |
gtaagaaaggtctaggtaacgcaaaagttttaagtttcttatctcatccacaagctctgagagat |
6527618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 6528153 - 6528093
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagt |
79 |
Q |
| |
|
|||||||| |||||||||||| | ||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
6528153 |
gatactaagttgggtaaatgactaccccttagccaatttggaaatctactacctttgtagt |
6528093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 6555719 - 6555659
Alignment:
| Q |
19 |
gatactaaattgggtaaatgatgatccccaagccaatttggaaagctactacctctgtagt |
79 |
Q |
| |
|
|||||||| |||||||||||| | ||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
6555719 |
gatactaagttgggtaaatgacaaccccttagccaatttggaaatctactacctttgtagt |
6555659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 60; Significance: 3e-25; HSPs: 3)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 422 - 621
Target Start/End: Complemental strand, 8378 - 8179
Alignment:
| Q |
422 |
aagatgacataaattgatgagtttgcgaaaatttgatgggagctcaatcagtttaaaacattcttccagtaagagcgtatgcaaattatacaacatacaa |
521 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| ||||||||| ||| || | ||| ||| | ||||| || || |||||||||||||||||| |
|
|
| T |
8378 |
aagatgacgtaaattgatgagtttggaaaaatttgaagggagctcagtcaattgacgacaaccttttaacaagagtgtttgtaaattatacaacatacaa |
8279 |
T |
|
| Q |
522 |
atggaattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaac |
621 |
Q |
| |
|
|||| || |||||||||| |||||| ||||| |||||||||||||| |||| ||| ||||| || | |||||| || | ||||||||||||| ||||| |
|
|
| T |
8278 |
atggtatcaggtaagcttctaatcttagtgtatgaaaggtctagataacgcaaaagttttaaattgcttatctcatccacaagctctgagagatagcaac |
8179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 526 - 583
Target Start/End: Original strand, 13353 - 13410
Alignment:
| Q |
526 |
aattaggtaagcttgtaatctcggtgtaagaaaggtctagatagcgcataagctttaa |
583 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13353 |
aattaggtatgcttgtaatctcagtgtaagaaaggtctagatagcgcagaagctttaa |
13410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 13489 - 13441
Alignment:
| Q |
184 |
gacacacttaattcttctaaatgtttcttatctttcaaatttgctgcca |
232 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
13489 |
gacatacttaattcttctaaatgttctttatcttccaaatttgctgcca |
13441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 558 - 649
Target Start/End: Complemental strand, 6574060 - 6573969
Alignment:
| Q |
558 |
aggtctagatagcgcataagctttaagtttcctatctcttcagctagctctgagagattgcaacaagagaaagacaacatccgcaaatattt |
649 |
Q |
| |
|
|||||||||||||||| ||||||||| || ||||||| || |||| ||||| ||| | |||| | |||| |||||||||||||||||||| |
|
|
| T |
6574060 |
aggtctagatagcgcaaaagctttaaattgactatctcatctgctaactctgtgagttcacaaccatagaatgacaacatccgcaaatattt |
6573969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 1089 - 1125
Alignment:
| Q |
192 |
taattcttctaaatgtttcttatctttcaaatttgct |
228 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1089 |
taattcttctacatgtttcttatctttcaaatttgct |
1125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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