View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1241_low_10 (Length: 426)

Name: NF1241_low_10
Description: NF1241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1241_low_10
NF1241_low_10
[»] chr3 (58 HSPs)
chr3 (208-397)||(47301047-47301237)
chr3 (13-96)||(30269084-30269167)
chr3 (13-96)||(45599267-45599350)
chr3 (13-96)||(54510387-54510470)
chr3 (14-96)||(29500325-29500407)
chr3 (13-96)||(4018908-4018991)
chr3 (13-96)||(14587387-14587470)
chr3 (13-96)||(7040873-7040956)
chr3 (13-96)||(13450264-13450347)
chr3 (13-96)||(33932486-33932569)
chr3 (13-96)||(36592216-36592299)
chr3 (13-96)||(48545101-48545184)
chr3 (13-96)||(52461019-52461102)
chr3 (13-96)||(54741795-54741878)
chr3 (13-94)||(2909424-2909505)
chr3 (13-94)||(29450651-29450732)
chr3 (24-96)||(20849404-20849476)
chr3 (13-96)||(22347079-22347163)
chr3 (24-96)||(53022669-53022741)
chr3 (13-96)||(26881613-26881696)
chr3 (13-96)||(46757551-46757633)
chr3 (13-92)||(52674775-52674853)
chr3 (14-96)||(43316516-43316598)
chr3 (15-96)||(12101464-12101545)
chr3 (24-96)||(39721262-39721334)
chr3 (13-96)||(7265047-7265130)
chr3 (13-96)||(19536699-19536782)
chr3 (24-96)||(35690212-35690284)
chr3 (24-96)||(38361753-38361825)
chr3 (24-96)||(46090118-46090190)
chr3 (24-96)||(50739157-50739229)
chr3 (24-96)||(50773626-50773698)
chr3 (24-94)||(44762725-44762795)
chr3 (24-94)||(47719487-47719557)
chr3 (24-96)||(41990764-41990836)
chr3 (13-96)||(13337091-13337173)
chr3 (35-94)||(36987740-36987799)
chr3 (35-94)||(37013179-37013238)
chr3 (24-94)||(48961122-48961192)
chr3 (13-96)||(37413560-37413644)
chr3 (24-96)||(42187749-42187821)
chr3 (24-96)||(46850711-46850783)
chr3 (24-96)||(54113415-54113487)
chr3 (24-96)||(54203746-54203818)
chr3 (13-96)||(50933196-50933279)
chr3 (35-96)||(15496470-15496531)
chr3 (24-96)||(35906684-35906756)
chr3 (35-96)||(20996334-20996395)
chr3 (35-96)||(46088720-46088781)
chr3 (13-75)||(875825-875884)
chr3 (15-90)||(12996818-12996893)
chr3 (36-96)||(33899842-33899902)
chr3 (40-85)||(10617639-10617684)
chr3 (24-96)||(54195682-54195754)
chr3 (45-96)||(8238921-8238972)
chr3 (38-85)||(54835743-54835790)
chr3 (24-67)||(44075414-44075456)
chr3 (24-60)||(34433767-34433803)
[»] chr1 (51 HSPs)
chr1 (13-96)||(41901700-41901783)
chr1 (13-96)||(11583148-11583231)
chr1 (13-96)||(17585507-17585590)
chr1 (13-96)||(25659810-25659893)
chr1 (13-96)||(33373820-33373903)
chr1 (13-96)||(33642602-33642685)
chr1 (13-96)||(33895217-33895300)
chr1 (13-96)||(39327043-39327126)
chr1 (13-96)||(45104172-45104255)
chr1 (13-95)||(43120780-43120862)
chr1 (13-96)||(3265108-3265191)
chr1 (13-96)||(7833537-7833620)
chr1 (13-96)||(9574853-9574936)
chr1 (13-96)||(33818094-33818177)
chr1 (13-96)||(33831925-33832008)
chr1 (13-96)||(33877562-33877645)
chr1 (13-96)||(33894087-33894170)
chr1 (13-96)||(36165521-36165604)
chr1 (21-96)||(47037131-47037206)
chr1 (13-91)||(40432208-40432286)
chr1 (16-96)||(11754228-11754308)
chr1 (16-96)||(38802300-38802380)
chr1 (21-96)||(14487324-14487399)
chr1 (13-96)||(46588091-46588174)
chr1 (24-96)||(24473551-24473623)
chr1 (24-96)||(43119114-43119186)
chr1 (35-96)||(43123052-43123113)
chr1 (24-96)||(17249038-17249110)
chr1 (24-95)||(36952714-36952785)
chr1 (24-96)||(39879140-39879212)
chr1 (24-96)||(46040486-46040558)
chr1 (37-96)||(16097358-16097417)
chr1 (15-86)||(31638425-31638496)
chr1 (24-96)||(1322525-1322597)
chr1 (35-94)||(34078296-34078355)
chr1 (38-94)||(17366355-17366411)
chr1 (24-96)||(18091277-18091348)
chr1 (24-88)||(34652277-34652341)
chr1 (44-96)||(7308331-7308383)
chr1 (38-94)||(39729206-39729262)
chr1 (53-96)||(31215864-31215907)
chr1 (53-96)||(31221619-31221662)
chr1 (45-90)||(23730301-23730346)
chr1 (29-96)||(11606467-11606534)
chr1 (40-94)||(33932934-33932988)
chr1 (24-92)||(43124356-43124424)
chr1 (45-96)||(28568754-28568805)
chr1 (36-83)||(44065455-44065502)
chr1 (45-91)||(17670009-17670055)
chr1 (35-96)||(49571215-49571276)
chr1 (35-91)||(49223164-49223219)
[»] scaffold0197 (1 HSPs)
scaffold0197 (13-96)||(25699-25782)
[»] chr8 (57 HSPs)
chr8 (13-96)||(17046010-17046093)
chr8 (13-96)||(39685413-39685496)
chr8 (16-96)||(17313541-17313621)
chr8 (13-96)||(14718857-14718940)
chr8 (13-96)||(27467702-27467785)
chr8 (13-96)||(34805779-34805862)
chr8 (9-96)||(2184410-2184497)
chr8 (13-96)||(7219369-7219452)
chr8 (13-96)||(16239168-16239251)
chr8 (13-92)||(41360980-41361059)
chr8 (13-96)||(43817964-43818047)
chr8 (25-96)||(44602938-44603009)
chr8 (15-96)||(44908488-44908569)
chr8 (13-96)||(36216576-36216659)
chr8 (23-96)||(16845028-16845101)
chr8 (24-96)||(169705-169777)
chr8 (24-96)||(6816033-6816105)
chr8 (13-96)||(11924757-11924841)
chr8 (24-96)||(36059276-36059348)
chr8 (24-96)||(37034826-37034898)
chr8 (24-96)||(38139313-38139385)
chr8 (24-96)||(26518796-26518867)
chr8 (24-96)||(1877578-1877650)
chr8 (24-96)||(2190647-2190719)
chr8 (28-96)||(39486028-39486096)
chr8 (24-94)||(38137721-38137791)
chr8 (24-96)||(11579194-11579266)
chr8 (24-96)||(38909288-38909360)
chr8 (28-96)||(39525458-39525526)
chr8 (24-96)||(42844281-42844352)
chr8 (37-96)||(41526324-41526383)
chr8 (15-96)||(34997523-34997604)
chr8 (39-96)||(39997991-39998048)
chr8 (15-96)||(15310387-15310470)
chr8 (15-96)||(15490756-15490839)
chr8 (15-86)||(44655059-44655130)
chr8 (43-96)||(42984011-42984064)
chr8 (41-96)||(27914929-27914984)
chr8 (41-96)||(27961348-27961403)
chr8 (35-96)||(12261469-12261531)
chr8 (38-96)||(45139050-45139108)
chr8 (40-96)||(14449611-14449667)
chr8 (23-66)||(1922389-1922432)
chr8 (36-83)||(9275854-9275901)
chr8 (41-96)||(27748853-27748908)
chr8 (41-96)||(27877985-27878040)
chr8 (41-96)||(28018166-28018221)
chr8 (35-94)||(40048678-40048738)
chr8 (24-67)||(20665621-20665663)
chr8 (26-77)||(39201524-39201574)
chr8 (45-96)||(41904778-41904829)
chr8 (45-96)||(45296785-45296836)
chr8 (35-65)||(33848722-33848752)
chr8 (29-95)||(34325869-34325935)
chr8 (41-86)||(41903138-41903183)
chr8 (24-64)||(1921795-1921835)
chr8 (42-82)||(39140812-39140852)
[»] chr7 (48 HSPs)
chr7 (13-96)||(10999102-10999185)
chr7 (13-96)||(17278144-17278227)
chr7 (13-96)||(27031229-27031312)
chr7 (13-96)||(29448717-29448800)
chr7 (13-96)||(32960796-32960879)
chr7 (13-96)||(40239897-40239980)
chr7 (13-96)||(41426953-41427036)
chr7 (13-94)||(23639417-23639498)
chr7 (13-96)||(1448090-1448173)
chr7 (21-96)||(12907909-12907984)
chr7 (13-96)||(18956298-18956381)
chr7 (13-96)||(38045647-38045730)
chr7 (13-96)||(40789169-40789252)
chr7 (16-94)||(37669271-37669349)
chr7 (13-94)||(45620639-45620720)
chr7 (16-96)||(43156185-43156264)
chr7 (24-96)||(41343320-41343392)
chr7 (23-96)||(44651882-44651955)
chr7 (24-96)||(4400065-4400137)
chr7 (24-96)||(4406627-4406699)
chr7 (24-96)||(47840731-47840803)
chr7 (38-96)||(21134356-21134414)
chr7 (24-85)||(4615393-4615454)
chr7 (13-96)||(4408036-4408119)
chr7 (24-96)||(6607097-6607169)
chr7 (24-96)||(20482280-20482352)
chr7 (24-96)||(36769226-36769298)
chr7 (24-96)||(5526108-5526177)
chr7 (38-95)||(5483420-5483477)
chr7 (24-83)||(4404295-4404354)
chr7 (24-96)||(4492435-4492506)
chr7 (40-96)||(40036027-40036083)
chr7 (42-96)||(23154654-23154707)
chr7 (36-85)||(3840030-3840079)
chr7 (24-73)||(20135099-20135148)
chr7 (24-65)||(43111035-43111076)
chr7 (40-96)||(36765592-36765648)
chr7 (34-85)||(17816600-17816650)
chr7 (24-67)||(19036360-19036402)
chr7 (34-85)||(19050351-19050401)
chr7 (24-67)||(20718234-20718276)
chr7 (24-67)||(29488481-29488523)
chr7 (24-67)||(33232655-33232697)
chr7 (24-67)||(34284797-34284839)
chr7 (45-96)||(42915378-42915429)
chr7 (24-65)||(16933500-16933541)
chr7 (24-65)||(16938883-16938924)
chr7 (35-96)||(38049237-38049298)
[»] chr6 (28 HSPs)
chr6 (13-96)||(3850216-3850299)
chr6 (13-96)||(18593610-18593693)
chr6 (13-95)||(33945824-33945906)
chr6 (13-96)||(559718-559801)
chr6 (13-96)||(20791537-20791620)
chr6 (13-96)||(24046560-24046643)
chr6 (13-96)||(28472212-28472295)
chr6 (13-96)||(32244368-32244451)
chr6 (24-93)||(6018577-6018646)
chr6 (24-93)||(6833553-6833622)
chr6 (24-96)||(5414562-5414634)
chr6 (24-96)||(34207003-34207075)
chr6 (24-96)||(34247755-34247827)
chr6 (24-94)||(10945711-10945781)
chr6 (35-96)||(29043220-29043281)
chr6 (24-96)||(7541107-7541179)
chr6 (24-96)||(24162794-24162866)
chr6 (24-96)||(173062-173134)
chr6 (24-96)||(17505488-17505560)
chr6 (40-96)||(19988908-19988964)
chr6 (24-96)||(29859411-29859483)
chr6 (23-96)||(3053915-3053987)
chr6 (29-96)||(8866970-8867037)
chr6 (24-91)||(18314008-18314074)
chr6 (24-67)||(247420-247462)
chr6 (24-67)||(12582487-12582529)
chr6 (25-67)||(29976317-29976359)
chr6 (35-96)||(28231075-28231135)
[»] chr5 (61 HSPs)
chr5 (13-96)||(2475274-2475357)
chr5 (13-96)||(6928360-6928443)
chr5 (13-93)||(24027863-24027943)
chr5 (16-96)||(31884665-31884745)
chr5 (13-96)||(16050774-16050857)
chr5 (13-96)||(24758971-24759054)
chr5 (13-96)||(26379203-26379286)
chr5 (13-96)||(31939835-31939918)
chr5 (15-96)||(42110679-42110760)
chr5 (13-96)||(4374857-4374940)
chr5 (13-96)||(32261715-32261798)
chr5 (13-94)||(3297827-3297908)
chr5 (16-96)||(665562-665642)
chr5 (24-96)||(27176476-27176548)
chr5 (13-96)||(5589467-5589550)
chr5 (13-96)||(42322865-42322948)
chr5 (35-96)||(25821234-25821295)
chr5 (15-96)||(39803853-39803934)
chr5 (24-96)||(2530085-2530157)
chr5 (24-96)||(40308340-40308412)
chr5 (24-96)||(789026-789098)
chr5 (24-96)||(28746318-28746390)
chr5 (35-96)||(36083805-36083866)
chr5 (36-96)||(15976494-15976554)
chr5 (24-96)||(29383727-29383799)
chr5 (28-96)||(43396524-43396592)
chr5 (24-95)||(10042792-10042863)
chr5 (21-96)||(19361647-19361722)
chr5 (24-94)||(36088578-36088648)
chr5 (24-94)||(40506804-40506874)
chr5 (24-94)||(42416800-42416870)
chr5 (35-96)||(37147078-37147139)
chr5 (24-96)||(790061-790133)
chr5 (24-96)||(3246829-3246901)
chr5 (24-96)||(8314829-8314901)
chr5 (24-96)||(29874668-29874740)
chr5 (28-96)||(42111809-42111877)
chr5 (35-96)||(7536656-7536717)
chr5 (24-96)||(19270905-19270977)
chr5 (13-91)||(28990943-28991022)
chr5 (35-96)||(16166292-16166353)
chr5 (24-96)||(29382576-29382649)
chr5 (35-96)||(35380505-35380566)
chr5 (24-96)||(30503532-30503604)
chr5 (24-96)||(30543875-30543947)
chr5 (15-90)||(31958390-31958465)
chr5 (41-91)||(15875756-15875806)
chr5 (44-96)||(14205433-14205485)
chr5 (25-88)||(1060706-1060768)
chr5 (41-96)||(2001506-2001561)
chr5 (29-96)||(14720185-14720252)
chr5 (55-96)||(30503759-30503800)
chr5 (55-96)||(30544102-30544143)
chr5 (49-90)||(39782983-39783024)
chr5 (41-96)||(36515058-36515113)
chr5 (24-67)||(37461872-37461914)
chr5 (26-96)||(3213231-3213300)
chr5 (35-85)||(43354524-43354573)
chr5 (35-84)||(28869364-28869413)
chr5 (35-67)||(28887196-28887228)
chr5 (38-82)||(36242337-36242381)
[»] chr4 (63 HSPs)
chr4 (13-96)||(1166629-1166712)
chr4 (13-96)||(1169111-1169194)
chr4 (13-96)||(7400209-7400292)
chr4 (13-96)||(10137883-10137966)
chr4 (13-96)||(11967004-11967087)
chr4 (13-96)||(13890996-13891079)
chr4 (13-96)||(32206596-32206679)
chr4 (13-96)||(40950935-40951018)
chr4 (13-96)||(53274618-53274701)
chr4 (13-96)||(55188160-55188243)
chr4 (21-96)||(6940178-6940253)
chr4 (13-96)||(7365786-7365869)
chr4 (9-96)||(11200819-11200906)
chr4 (13-96)||(27288474-27288557)
chr4 (13-96)||(34264632-34264715)
chr4 (13-96)||(55208488-55208571)
chr4 (15-96)||(28116843-28116924)
chr4 (13-96)||(26111368-26111451)
chr4 (13-96)||(55991809-55991892)
chr4 (14-96)||(17624651-17624733)
chr4 (13-96)||(36190059-36190142)
chr4 (24-96)||(8847939-8848011)
chr4 (15-96)||(23628826-23628908)
chr4 (15-96)||(18138327-18138408)
chr4 (24-96)||(11180909-11180981)
chr4 (24-96)||(24303803-24303875)
chr4 (24-96)||(41144305-41144377)
chr4 (24-96)||(43117519-43117591)
chr4 (13-96)||(29099625-29099708)
chr4 (35-96)||(46045795-46045856)
chr4 (24-96)||(17976448-17976520)
chr4 (24-96)||(22556965-22557037)
chr4 (24-96)||(26097651-26097723)
chr4 (24-96)||(40665522-40665593)
chr4 (24-96)||(49125546-49125618)
chr4 (24-96)||(37873646-37873718)
chr4 (24-96)||(40849729-40849801)
chr4 (38-94)||(51153499-51153555)
chr4 (14-96)||(32200716-32200799)
chr4 (24-93)||(8654318-8654386)
chr4 (35-96)||(32139420-32139481)
chr4 (24-96)||(346607-346679)
chr4 (24-96)||(20681196-20681268)
chr4 (35-91)||(39651747-39651803)
chr4 (38-86)||(28361503-28361551)
chr4 (21-65)||(34663868-34663912)
chr4 (44-96)||(40952041-40952093)
chr4 (24-96)||(51187618-51187690)
chr4 (36-86)||(25881932-25881982)
chr4 (35-96)||(8151214-8151274)
chr4 (16-85)||(24631113-24631181)
chr4 (24-65)||(45472468-45472509)
chr4 (28-96)||(30071346-30071414)
chr4 (24-65)||(52620639-52620680)
chr4 (24-67)||(10262027-10262069)
chr4 (24-67)||(21562386-21562428)
chr4 (24-67)||(24080098-24080140)
chr4 (34-85)||(29346238-29346288)
chr4 (34-85)||(35832002-35832052)
chr4 (24-67)||(43329907-43329949)
chr4 (41-82)||(41105971-41106012)
chr4 (45-85)||(9097481-9097521)
chr4 (13-49)||(45019226-45019262)
[»] chr2 (36 HSPs)
chr2 (13-96)||(970945-971028)
chr2 (13-96)||(1835677-1835760)
chr2 (13-96)||(5166258-5166341)
chr2 (13-96)||(7233015-7233098)
chr2 (13-96)||(8878111-8878194)
chr2 (13-96)||(31972274-31972357)
chr2 (16-96)||(24926085-24926165)
chr2 (21-96)||(18166833-18166908)
chr2 (13-96)||(36085947-36086030)
chr2 (14-96)||(8683652-8683734)
chr2 (15-96)||(7274664-7274745)
chr2 (13-96)||(3324264-3324347)
chr2 (24-94)||(4631211-4631281)
chr2 (24-96)||(3243295-3243367)
chr2 (24-94)||(34912654-34912724)
chr2 (24-96)||(36078556-36078628)
chr2 (24-96)||(38879139-38879211)
chr2 (15-96)||(668294-668375)
chr2 (24-96)||(3079720-3079792)
chr2 (24-96)||(10120612-10120684)
chr2 (24-96)||(40202218-40202290)
chr2 (35-96)||(41452829-41452890)
chr2 (35-96)||(45474736-45474797)
chr2 (24-96)||(35423789-35423861)
chr2 (13-96)||(17032813-17032896)
chr2 (50-96)||(20313248-20313294)
chr2 (35-91)||(38709709-38709765)
chr2 (24-96)||(1117981-1118055)
chr2 (24-91)||(9799330-9799397)
chr2 (38-96)||(2180035-2180093)
chr2 (53-96)||(38959644-38959687)
chr2 (13-67)||(17051167-17051221)
chr2 (24-67)||(3708454-3708496)
chr2 (24-67)||(11868920-11868962)
chr2 (24-67)||(35360313-35360355)
chr2 (38-88)||(37522713-37522763)
[»] scaffold0166 (1 HSPs)
scaffold0166 (13-96)||(1465-1548)
[»] scaffold0481 (2 HSPs)
scaffold0481 (16-96)||(4512-4592)
scaffold0481 (16-96)||(7442-7522)
[»] scaffold0178 (1 HSPs)
scaffold0178 (24-96)||(7292-7364)
[»] scaffold0024 (2 HSPs)
scaffold0024 (24-94)||(90463-90533)
scaffold0024 (38-94)||(110529-110585)
[»] scaffold0198 (1 HSPs)
scaffold0198 (24-96)||(15261-15333)
[»] scaffold0244 (1 HSPs)
scaffold0244 (24-96)||(7574-7646)
[»] scaffold0768 (1 HSPs)
scaffold0768 (24-93)||(6306-6375)
[»] scaffold0020 (1 HSPs)
scaffold0020 (13-96)||(132647-132730)
[»] scaffold0027 (1 HSPs)
scaffold0027 (35-94)||(138031-138090)
[»] scaffold0003 (1 HSPs)
scaffold0003 (41-96)||(229101-229156)
[»] scaffold0318 (1 HSPs)
scaffold0318 (41-96)||(1072-1127)
[»] scaffold0078 (1 HSPs)
scaffold0078 (36-96)||(5732-5793)
[»] scaffold0038 (1 HSPs)
scaffold0038 (35-96)||(31572-31632)


Alignment Details
Target: chr3 (Bit Score: 167; Significance: 3e-89; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 208 - 397
Target Start/End: Complemental strand, 47301237 - 47301047
Alignment:
Q  208 aattttgcttttgagagtcaactcatataaaacaaacattgagactgattaattcaagaatttggattgagttaattaagcgccaccggaaatcgtcgtt 307  Q
    |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47301237 aattttgtctttgagagtcaactcatataaaacaaacatcgagactgattaattcaagaatttggattgagttaattaagcgccaccggaaatcgtcgtt 47301138  T
Q  308 gaagtaaaggttttgttttgttacctttgaaaggagggggt-ggaggacgaggagactcttcattattttttaattaaccaaccttctttt 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47301137 gaagtaaaggttttgttttgttacctttgaaaggagggggtgggaggacgaggagactctttattattttttaattaaccaaccttctttt 47301047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 30269167 - 30269084
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30269167 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 30269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 45599350 - 45599267
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45599350 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45599267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 54510470 - 54510387
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54510470 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 29500325 - 29500407
Alignment:
Q  14 agacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29500325 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 4018908 - 4018991
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4018908 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 4018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 14587470 - 14587387
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14587470 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 14587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7040873 - 7040956
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7040873 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 7040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13450264 - 13450347
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  13450264 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33932569 - 33932486
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  33932569 cagacaccaccaaaaaataataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36592299 - 36592216
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  36592299 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact 36592216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 48545101 - 48545184
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48545101 cagacaccaccaaaaaataataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact 48545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 52461019 - 52461102
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52461019 cagacaccacgaaaaaattataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 52461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 54741795 - 54741878
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54741795 cagacaccaccaaaaaataataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 2909424 - 2909505
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  2909424 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaa 2909505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 29450651 - 29450732
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  29450651 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaa 29450732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 20849476 - 20849404
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20849476 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 22347163 - 22347079
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaata-ttttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  22347163 cagacaccaccaaaaaataataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact 22347079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 53022669 - 53022741
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  53022669 aaaaaataataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact 53022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26881613 - 26881696
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  26881613 cagacaccacaaaaaaataataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact 26881696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 46757551 - 46757633
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46757551 cagacaccaccaaaaaataataaattcaaagttta-tacaatattttgccaaacagcttttaactcaaaaataactttagaact 46757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 52674775 - 52674853
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttag 92  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52674775 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacag-ttttaactcaaaaataactttag 52674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 43316598 - 43316516
Alignment:
Q  14 agacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| || |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43316598 agacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 12101545 - 12101464
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  12101545 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 39721262 - 39721334
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39721262 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 39721334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7265047 - 7265130
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  7265047 cagacaccacaaaaaaataataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact 7265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 19536699 - 19536782
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| | ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19536699 cagacaccagcaaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact 19536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 35690284 - 35690212
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  35690284 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 38361753 - 38361825
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  38361753 aaaaaataataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaact 38361825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 46090190 - 46090118
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  46090190 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 50739157 - 50739229
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  50739157 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50739229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 50773698 - 50773626
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  50773698 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50773626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 44762795 - 44762725
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  44762795 aaaatataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 44762725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 47719487 - 47719557
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  47719487 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaa 47719557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 41990836 - 41990764
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  41990836 aaaaaataataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41990764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13337091 - 13337173
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| ||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||    
T  13337091 cagacaccacaaaaaaataataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 36987799 - 36987740
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  36987799 aattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 36987740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 37013238 - 37013179
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  37013238 aattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 37013179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 48961122 - 48961192
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||    
T  48961122 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa 48961192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 37413560 - 37413644
Alignment:
Q  13 cagacactaccaa-aaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  37413560 cagacaccaccaagaaaataataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataact 37413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 42187821 - 42187749
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  42187821 aaaaaataataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataact 42187749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 46850783 - 46850711
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||    
T  46850783 aaaaaataataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 46850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 54113415 - 54113487
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  54113415 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataact 54113487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 54203818 - 54203746
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  54203818 aaaaaataataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 54203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 50933196 - 50933279
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| |||| ||| |||||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  50933196 cagacacaacaaaaaaataataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 15496531 - 15496470
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  15496531 aattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaact 15496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 35906756 - 35906684
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| ||| || ||||||| | |||||||| |||||||||    
T  35906756 aaaaaataatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 20996395 - 20996334
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| ||||||||||||||||| |||||| ||||||| | ||||||||||||||||||    
T  20996395 aattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 46088781 - 46088720
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||    
T  46088781 aattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 875825 - 875884
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaa 75  Q
    ||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||| ||||    
T  875825 cagacaccaccaaaaaataa---attcaaagttttgtacaatattttgccaaacagctcttaa 875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 12996893 - 12996818
Alignment:
Q  15 gacactaccaaaaaa-taattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 90  Q
    ||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||    
T  12996893 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatatttttccaaacaacttttaacttaaaaataacttt 12996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 33899842 - 33899902
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataact 33899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 10617639 - 10617684
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaata 10617684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 54195754 - 54195682
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||| ||||||||||||||||| |||| |  |||||||| |||||||| || ||||||    
T  54195754 aaaaaataataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataatttcagaact 54195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 8238921 - 8238972
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  8238921 tttgtacaatattttgccaaacaacatttaacttaaaaataactttaaaact 8238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 54835743 - 54835790
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  54835743 tcaaaattttgtacaatattttgccaaacaacttttaacttaaaaata 54835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 44075456 - 44075414
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  44075456 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 44075414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 34433803 - 34433767
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttg 60  Q
    |||||||||| |||| |||||||||||||||||||||    
T  34433803 aaaaaataataaattaaaagttttgtacaatattttg 34433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 41901783 - 41901700
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41901783 cagacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41901700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 11583148 - 11583231
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11583148 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 11583231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 17585507 - 17585590
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17585507 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17585590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 25659893 - 25659810
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25659893 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33373903 - 33373820
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33373903 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33373820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 33642602 - 33642685
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33642602 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33895300 - 33895217
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33895300 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33895217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 39327126 - 39327043
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39327126 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39327043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 45104172 - 45104255
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45104172 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 43120862 - 43120780
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 95  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43120862 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 43120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 3265108 - 3265191
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3265108 cagacaccaccaaaaaataataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact 3265191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7833537 - 7833620
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7833537 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact 7833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 9574853 - 9574936
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9574853 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact 9574936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33818177 - 33818094
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33818177 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33818094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33832008 - 33831925
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33832008 cagacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33877645 - 33877562
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33877645 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33877562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 33894170 - 33894087
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33894170 cagacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33894087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36165604 - 36165521
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36165604 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact 36165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 47037206 - 47037131
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47037206 accaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 47037131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 40432286 - 40432208
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40432286 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 40432208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 11754308 - 11754228
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11754308 acaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 11754228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 38802300 - 38802380
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38802300 acaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 38802380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 14487399 - 14487324
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14487399 accaaaaaataataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact 14487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 46588174 - 46588091
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  46588174 cagacaccaccaaaaaataataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact 46588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 24473623 - 24473551
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  24473623 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 43119186 - 43119114
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43119186 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43119114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 43123052 - 43123113
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43123052 aattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 43123113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 17249038 - 17249110
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  17249038 aaaaaataataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 17249110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 36952785 - 36952714
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  36952785 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaac 36952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 39879212 - 39879140
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  39879212 aaaaaataataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 46040558 - 46040486
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  46040558 aaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 16097358 - 16097417
Alignment:
Q  37 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  16097358 ttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact 16097417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 31638496 - 31638425
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  31638496 gacaccacaaaaaaataattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataa 31638425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 1322597 - 1322525
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||    
T  1322597 aaaaaataataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 34078296 - 34078355
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  34078296 aattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaa 34078355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 17366411 - 17366355
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaa 17366355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 18091277 - 18091348
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||| ||||    
T  18091277 aaaaaataataaattcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 34652277 - 34652341
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 88  Q
    |||||||||| |||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  34652277 aaaaaataataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 7308383 - 7308331
Alignment:
Q  44 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  7308383 ttttgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 39729262 - 39729206
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 39729206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 31215907 - 31215864
Alignment:
Q  53 atattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaact 31215864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 31221662 - 31221619
Alignment:
Q  53 atattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaact 31221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 23730346 - 23730301
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataacttt 90  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  23730346 tttgtacaatattttgccaaacaacttttaacttaaaaataacttt 23730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 11606534 - 11606467
Alignment:
Q  29 ataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||| | | ||||| ||||| ||||    
T  11606534 ataataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaatagctttaaaact 11606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 33932934 - 33932988
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||||  ||||||||||||||| ||||||| | ||||||||||||||||    
T  33932934 aaagttttgtatgatattttgccaaacaacttttaatttaaaaataactttagaa 33932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 43124356 - 43124424
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttag 92  Q
    |||||||||  |||||||| |||| || ||||||||||||||||  |||||||| ||||||||| ||||    
T  43124356 aaaaaataaaaaattcaaatttttatataatattttgccaaacaaattttaacttaaaaataaccttag 43124424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 28568805 - 28568754
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  28568805 tttgtacaatattttgccaaacaacatttaacttaaaaatatctttaaaact 28568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 44065502 - 44065455
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaa 83  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| |||||    
T  44065502 attcaaagctttgtacaatattgtgccaaacaacttttaacttaaaaa 44065455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 17670009 - 17670055
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||||||||||||||||||| | ||||||| |||| ||||||||    
T  17670009 tttgtacaatattttgccaaacaacatttaacttaaaagtaacttta 17670055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 49571215 - 49571276
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| |||||||||||||||||| || ||||||  || ||||  ||||||||||||||||||    
T  49571215 aatttaaagttttgtacaatattgtgtcaaacaaattataacataaaaataactttagaact 49571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 49223164 - 49223219
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||| ||||||||||||| |||||| | ||||||| ||||||| |||||    
T  49223164 aattcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaaatagcttta 49223219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 25699 - 25782
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25699 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 17046093 - 17046010
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046093 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17046010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 39685413 - 39685496
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39685413 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39685496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 17313621 - 17313541
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17313621 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17313541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 14718857 - 14718940
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14718857 cagacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 14718940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 27467702 - 27467785
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27467702 cagacaccaccaaaaaaaaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27467785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 34805779 - 34805862
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34805779 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 34805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 2184497 - 2184410
Alignment:
Q  9 accacagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2184497 accacagacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7219369 - 7219452
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7219369 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 7219452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 16239251 - 16239168
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16239251 cagacaccactataaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16239168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 41360980 - 41361059
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttag 92  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41360980 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttag 41361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 43818047 - 43817964
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43818047 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 43817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 44603009 - 44602938
Alignment:
Q  25 aaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44603009 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 44602938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 44908488 - 44908569
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44908488 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 44908569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36216659 - 36216576
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  36216659 cagacaccacaaaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 16845028 - 16845101
Alignment:
Q  23 caaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16845028 caaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact 16845101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 169777 - 169705
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  169777 aaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact 169705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 6816033 - 6816105
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6816033 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 6816105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 11924757 - 11924841
Alignment:
Q  13 cagacactaccaa-aaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  11924757 cagacaccaccaagaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 11924841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 36059348 - 36059276
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  36059348 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 37034826 - 37034898
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  37034826 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37034898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 38139313 - 38139385
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  38139313 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 38139385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 26518867 - 26518796
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  26518867 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa-tttagaact 26518796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 1877650 - 1877578
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  1877650 aaaaaataataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 2190719 - 2190647
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  2190719 aaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 39486096 - 39486028
Alignment:
Q  28 aataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  39486096 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaact 39486028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 38137791 - 38137721
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||    
T  38137791 aaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaa 38137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 11579194 - 11579266
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||  |||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  11579194 aaaaaataacaaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact 11579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 38909288 - 38909360
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||| ||||||||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  38909288 aaaaaataataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 39525458 - 39525526
Alignment:
Q  28 aataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||||||    
T  39525458 aataataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact 39525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 42844281 - 42844352
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  42844281 aaaaaataataaatttaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 41526324 - 41526383
Alignment:
Q  37 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 41526383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 34997523 - 34997604
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| || |||||||||| |||||  | |||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  34997523 gacaccacaaaaaaataataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataactatagaact 34997604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 39997991 - 39998048
Alignment:
Q  39 caaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact 39998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 15310387 - 15310470
Alignment:
Q  15 gacactacca-aaaaataattaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||||||||    
T  15310387 gacactaccacaaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 15490756 - 15490839
Alignment:
Q  15 gacactacca-aaaaataattaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||||||||    
T  15490756 gacactaccacaaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 44655059 - 44655130
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    ||||| || ||||||||||||||||||||||||||| || ||||||||||||| ||||| ||| ||||||||    
T  44655059 gacaccacaaaaaaataattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataa 44655130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 42984011 - 42984064
Alignment:
Q  43 gttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  42984011 gttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27914929 - 27914984
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27914984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27961348 - 27961403
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 12261531 - 12261469
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||| ||||    
T  12261531 aattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaact 12261469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 45139108 - 45139050
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||    
T  45139108 tcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaact 45139050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||||||||||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 1922389 - 1922432
Alignment:
Q  23 caaaaaataattaattcaaagttttgtacaatattttgccaaac 66  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  1922389 caaaaaataataaattcaaagttttgtacaatattttgtcaaac 1922432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaa 83  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27748853 - 27748908
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  27748853 aagttttgcataatattttgccaaacaacttttaacttaaaaataactttaaaact 27748908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27877985 - 27878040
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||| ||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 27878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 28018166 - 28018221
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||| ||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 28018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 40048738 - 40048678
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaa-cagcttttaactcaaaaataactttagaa 94  Q
    |||||||||||||| |||||||| ||| ||| || ||||||||| ||||||||||||||||    
T  40048738 aattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataactttagaa 40048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 20665663 - 20665621
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  20665663 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 20665621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 39201524 - 39201574
Alignment:
Q  26 aaaataattaattcaaagttttgtacaatattttgccaaacagcttttaact 77  Q
    |||||||| |||||||| |||||||||||||||||||||||| | |||||||    
T  39201524 aaaataataaattcaaa-ttttgtacaatattttgccaaacaacatttaact 39201574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 41904778 - 41904829
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  41904778 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 41904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 45296836 - 45296785
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  45296836 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 45296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 33848752 - 33848722
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||||||||||||||||||||||||    
T  33848752 aattcaaagttttgtacaatattttgccaaa 33848722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 34325869 - 34325935
Alignment:
Q  29 ataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 95  Q
    ||||| |||| ||| |||| |||||||||||| |||||| ||||||||| || |||||| |||||||    
T  34325869 ataataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataaccttagaac 34325935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 41903183 - 41903138
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    ||||||| |||||||||||||||||||  |||||||| ||||||||    
T  41903183 aagttttatacaatattttgccaaacaaattttaacttaaaaataa 41903138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 1921795 - 1921835
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaa 64  Q
    |||||||||| ||||||||||| |||| |||||||||||||    
T  1921795 aaaaaataataaattcaaagttgtgtataatattttgccaa 1921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 39140852 - 39140812
Alignment:
Q  42 agttttgtacaatattttgccaaacagcttttaactcaaaa 82  Q
    |||||||||||||||||||| ||||| ||||||||| ||||    
T  39140852 agttttgtacaatattttgctaaacaacttttaacttaaaa 39140812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 10999102 - 10999185
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10999102 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 17278144 - 17278227
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17278144 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 27031312 - 27031229
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27031312 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27031229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 29448800 - 29448717
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29448800 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29448717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 32960879 - 32960796
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32960879 cagacactatcaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32960796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 40239980 - 40239897
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40239980 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40239897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 41426953 - 41427036
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41426953 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41427036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 23639498 - 23639417
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23639498 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 23639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 1448090 - 1448173
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1448090 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact 1448173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 12907909 - 12907984
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12907909 accaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 12907984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 18956381 - 18956298
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18956381 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 18956298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 38045647 - 38045730
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38045647 cagacaccaccaaaaaataataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 38045730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 40789169 - 40789252
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40789169 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataact 40789252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 37669349 - 37669271
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37669349 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 37669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 45620639 - 45620720
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45620639 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 45620720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 43156185 - 43156264
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43156185 acaccaccaaaaaataat-aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 43156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 41343392 - 41343320
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  41343392 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact 41343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 44651955 - 44651882
Alignment:
Q  23 caaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||    
T  44651955 caaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 4400137 - 4400065
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| | |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  4400137 aaaaaatattaaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 4400065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 4406699 - 4406627
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |||||    
T  4406699 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaact 4406627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 47840731 - 47840803
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  47840731 aaaaaatactaaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 21134414 - 21134356
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  21134414 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 4615393 - 4615454
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4615393 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 4408119 - 4408036
Alignment:
Q  13 cagacactaccaaaaa-ataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4408119 cagacaccaccaaaaagataataaattcaaagttta-tacaatattttgccaaacagcttttaacttaaaaataactttaaaact 4408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 6607097 - 6607169
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||    
T  6607097 aaaaaataataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 20482280 - 20482352
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| ||||    
T  20482280 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 36769226 - 36769298
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  36769226 aaaaaataataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 5526108 - 5526177
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||||||||    
T  5526108 aaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 5483420 - 5483477
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 95  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  5483420 tcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac 5483477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 4404295 - 4404354
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaa 83  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||    
T  4404295 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa 4404354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 4492506 - 4492435
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||| |  |||||||| ||||||||    
T  4492506 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaa-tttaaaataaccttagaact 4492435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 40036083 - 40036027
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||    
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaact 40036027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 23154654 - 23154707
Alignment:
Q  42 agttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  23154654 agttttgtacaatattttgccaaacaacttttaact-taaaataactttagaact 23154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 3840030 - 3840079
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  3840030 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaata 3840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 20135148 - 20135099
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagctttt 73  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  20135148 aaaaaatattaaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 43111035 - 43111076
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  43111035 aaaaaataataaattcaaagttttgtacaatattttgccaaa 43111076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||  ||||||| |||||| ||||||||| ||||||||||||||||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 17816600 - 17816650
Alignment:
Q  34 taattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  17816600 taattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 17816650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 19036402 - 19036360
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  19036402 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 19036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 19050401 - 19050351
Alignment:
Q  34 taattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  19050401 taattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 19050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 20718234 - 20718276
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  20718234 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 20718276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 29488481 - 29488523
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  29488481 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 29488523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 33232697 - 33232655
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  33232697 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 33232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 34284839 - 34284797
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  34284839 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 34284797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 42915378 - 42915429
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  42915378 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 42915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 16933541 - 16933500
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||| ||||||| |||||||||||||||||| ||||    
T  16933541 aaaaaataataaattcaatgttttgtacaatattttgtcaaa 16933500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 16938924 - 16938883
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||| ||||||| |||||||||||||||||| ||||    
T  16938924 aaaaaataataaattcaatgttttgtacaatattttgtcaaa 16938883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 38049298 - 38049237
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| |||||| ||||||||||||| ||||||| ||||||| | |||||||| |||| ||||    
T  38049298 aattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaact 38049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 3850216 - 3850299
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3850216 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 3850299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 18593693 - 18593610
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18593693 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18593610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 33945906 - 33945824
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 95  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33945906 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 33945824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 559718 - 559801
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  559718 cagacaccaccagaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 20791537 - 20791620
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20791537 cagacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 20791620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 24046643 - 24046560
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24046643 cagacaccaccaaaggataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 28472212 - 28472295
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  28472212 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 28472295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 32244368 - 32244451
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  32244368 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaact 32244451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 6018646 - 6018577
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 93  Q
    |||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  6018646 aaaaaataataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaga 6018577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 6833553 - 6833622
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  6833553 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6833622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 5414634 - 5414562
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  5414634 aaaaattaataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 34207075 - 34207003
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  34207075 aaaaaataataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 34247827 - 34247755
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||    
T  34247827 aaaaaataataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 34247755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 10945711 - 10945781
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  10945711 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataactttagaa 10945781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 29043220 - 29043281
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  29043220 aattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 7541107 - 7541179
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| || ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  7541107 aaaaaataataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaact 7541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 24162794 - 24162866
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||| ||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  24162794 aaaaaataataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 173134 - 173062
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||| |||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||||    
T  173134 aaaaaataataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 17505488 - 17505560
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||||||||    
T  17505488 aaaaaattataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaact 17505560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 19988908 - 19988964
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact 19988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 29859411 - 29859483
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||||||  ||||||||    
T  29859411 aaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaact 29859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 3053987 - 3053915
Alignment:
Q  23 caaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  3053987 caaaaaataataaatttaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 3053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 8866970 - 8867037
Alignment:
Q  29 ataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||| ||  ||||||||||||||||||| ||||||||| ||||||| ||||| ||||    
T  8866970 ataataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 8867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 18314008 - 18314074
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||| |||||||||||| |||||||||||||||| ||| | ||||| | |||||||||||||    
T  18314008 aaaaaataataaattcaaagttt-gtacaatattttgccacacaacatttaaattaaaaataacttta 18314074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 247420 - 247462
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  247420 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 247462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 12582529 - 12582487
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  12582529 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 12582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 29976317 - 29976359
Alignment:
Q  25 aaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||| |||| |||||||||||||||||||| |||||||    
T  29976317 aaaaataataaatttaaagttttgtacaatatttttccaaaca 29976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 28231135 - 28231075
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||| ||||    
T  28231135 aattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 28231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 2475357 - 2475274
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2475357 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 2475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 6928443 - 6928360
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6928443 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 24027943 - 24027863
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 93  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24027943 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 24027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 31884745 - 31884665
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31884745 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 16050857 - 16050774
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16050857 cagacaccaccaaaaaataataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16050774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 24758971 - 24759054
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24758971 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 24759054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26379203 - 26379286
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26379203 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 26379286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 31939918 - 31939835
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31939918 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact 31939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 42110679 - 42110760
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42110679 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 42110760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 4374940 - 4374857
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  4374940 cagacaccaccaaaaaataataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaact 4374857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 32261798 - 32261715
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  32261798 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact 32261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 3297908 - 3297827
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    ||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  3297908 cagacaccaccaaaaaataataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaa 3297827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 665642 - 665562
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  665642 acaccaccaaaaaataataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact 665562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 27176548 - 27176476
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27176548 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 27176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 5589550 - 5589467
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5589550 cagacaccaccaaaaaatgataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 5589467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 42322865 - 42322948
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  42322865 cagacaccatcaaaaaataataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact 42322948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 25821234 - 25821295
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25821234 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25821295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 39803934 - 39803853
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  39803934 gacacaaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 2530085 - 2530157
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  2530085 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 2530157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40308340 - 40308412
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  40308340 aaaaaataataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 789098 - 789026
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  789098 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 28746390 - 28746318
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  28746390 aaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact 28746318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 36083805 - 36083866
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  36083805 aattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 36083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15976494 - 15976554
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15976494 attcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 15976554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 29383799 - 29383727
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||||    
T  29383799 aaaaaataataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaact 29383727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 43396524 - 43396592
Alignment:
Q  28 aataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  43396524 aataataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaact 43396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 10042792 - 10042863
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 95  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||    
T  10042792 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaac 10042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 19361647 - 19361722
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||| ||  || |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  19361647 accaaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 19361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 36088578 - 36088648
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||    
T  36088578 aaaaaataataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaa 36088648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 40506874 - 40506804
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||    
T  40506874 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttaagaa 40506804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 42416800 - 42416870
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| ||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  42416800 aaaaaataataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 42416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 37147078 - 37147139
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  37147078 aattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 790133 - 790061
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||| ||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||    
T  790133 aaaaaataataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 790061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 3246829 - 3246901
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| || ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  3246829 aaaaaataataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact 3246901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 8314829 - 8314901
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||||||||    
T  8314829 aaaaaataataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact 8314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 29874740 - 29874668
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| |||||||||| |||||||    
T  29874740 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaact 29874668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 42111877 - 42111809
Alignment:
Q  28 aataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||    
T  42111877 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataact 42111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 7536656 - 7536717
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  7536656 aattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 7536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 19270905 - 19270977
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| |||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  19270905 aaaaaataataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaatagctttaaaact 19270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 28991022 - 28990943
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataacttta 91  Q
    ||||||| | || |||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||    
T  28991022 cagacaccatcataaaataataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaatagcttta 28990943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 16166353 - 16166292
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||| |||| | ||||||||| |||||||| |||||||||    
T  16166353 aattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 29382649 - 29382576
Alignment:
Q  24 aaaaaataattaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| |||  |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  29382649 aaaaaataataaatttaaaaattttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||||||| |||||||||||||||| ||||||||| |||| |||||||||||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 30503604 - 30503532
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||||||||    
T  30503604 aaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30503532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 30543947 - 30543875
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||||||||    
T  30543947 aaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30543875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 31958465 - 31958390
Alignment:
Q  15 gacactaccaaaaaa-taattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 90  Q
    ||||| ||||||||| |||| |||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  31958465 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaataacttt 31958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 15875806 - 15875756
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataacttta 15875756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 14205433 - 14205485
Alignment:
Q  44 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||||||||||    
T  14205433 ttttgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 1060706 - 1060768
Alignment:
Q  25 aaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 88  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||  |||||||| ||||||||||    
T  1060706 aaaaataataaattcaaagttt-gtacaatattttgtcaaacaatttttaacttaaaaataact 1060768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 2001506 - 2001561
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||||| ||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactttaaaact 2001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 14720185 - 14720252
Alignment:
Q  29 ataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||| || || ||||||| ||||| ||||    
T  14720185 ataataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaatagctttaaaact 14720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  55 attttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  55 attttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 39782983 - 39783024
Alignment:
Q  49 tacaatattttgccaaacagcttttaactcaaaaataacttt 90  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  39782983 tacaatattttgccaaacaacttttaactgaaaaataacttt 39783024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 36515113 - 36515058
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||| |||||||||||||| |||||||||  ||||||| |||| ||||    
T  36515113 aagttttgtacattattttgccaaacaacttttaactttaaaataattttaaaact 36515058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 37461872 - 37461914
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  37461872 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 37461914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 3213300 - 3213231
Alignment:
Q  26 aaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| |||||||||||| ||||||||||||| |||||| | |||||||  |||||| ||||| ||||    
T  3213300 aaaataataaattcaaagttt-gtacaatattttgtcaaacaacatttaactttaaaatagctttaaaact 3213231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 43354524 - 43354573
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  43354524 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 43354573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 28869364 - 28869413
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaat 84  Q
    |||| ||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  28869364 aatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 28887196 - 28887228
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaaca 67  Q
    |||| ||||||||||||||||||||||||||||    
T  28887196 aatttaaagttttgtacaatattttgccaaaca 28887228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 36242337 - 36242381
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaa 82  Q
    |||||||||||||||||||||| |||||||  |||||||| ||||    
T  36242337 tcaaagttttgtacaatattttaccaaacaagttttaacttaaaa 36242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 1166629 - 1166712
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1166629 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 1169111 - 1169194
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1169111 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 7400292 - 7400209
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7400292 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 10137966 - 10137883
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10137966 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 11967087 - 11967004
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11967087 cagacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 11967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 13891079 - 13890996
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13891079 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 13890996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 32206679 - 32206596
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32206679 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 40950935 - 40951018
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40950935 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40951018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 53274618 - 53274701
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53274618 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 53274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 55188160 - 55188243
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55188160 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 55188243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 6940253 - 6940178
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6940253 accaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7365786 - 7365869
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7365786 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 7365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 11200819 - 11200906
Alignment:
Q  9 accacagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11200819 accacagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 11200906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 27288557 - 27288474
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27288557 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 34264715 - 34264632
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34264715 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 34264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 55208571 - 55208488
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55208571 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaact 55208488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 28116924 - 28116843
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28116924 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 28116843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26111368 - 26111451
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26111368 cagacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 26111451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 55991809 - 55991892
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  55991809 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact 55991892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 17624651 - 17624733
Alignment:
Q  14 agacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  17624651 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact 17624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36190142 - 36190059
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  36190142 cagacaccatcaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact 36190059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 8847939 - 8848011
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  8847939 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 8848011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 23628826 - 23628908
Alignment:
Q  15 gacactaccaaa-aaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  23628826 gacaccaccaaagaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 23628908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 18138327 - 18138408
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||    
T  18138327 gacaccaccaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 11180909 - 11180981
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  11180909 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 24303875 - 24303803
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  24303875 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact 24303803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 41144377 - 41144305
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  41144377 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 43117519 - 43117591
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  43117519 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 29099708 - 29099625
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29099708 cagacaccaccaaaaaataataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 46045856 - 46045795
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46045856 aattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 46045795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 17976448 - 17976520
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||    
T  17976448 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 17976520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 22556965 - 22557037
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||    
T  22556965 aaaaaataataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 26097723 - 26097651
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||    
T  26097723 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40665522 - 40665593
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  40665522 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 49125546 - 49125618
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||    
T  49125546 aaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 37873718 - 37873646
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||  |||||||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  37873718 aaaaaataataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 37873646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40849729 - 40849801
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| ||||    
T  40849729 aaaaaataataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 51153499 - 51153555
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 51153555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 32200799 - 32200716
Alignment:
Q  14 agacactaccaaaaaa-taattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| ||||    
T  32200799 agacaccaccaaaaaagtaataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 8654386 - 8654318
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 93  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||||    
T  8654386 aaaaaataataaattcaaagttttgtacaata-tttgccaaacaatttttaacttaaaaataactttaga 8654318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 32139420 - 32139481
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  32139420 aattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaact 32139481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 346679 - 346607
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| | ||||||||| || |||||||||||||||    
T  346679 aaaaaataataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact 346607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 20681196 - 20681268
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  20681196 aaaaaataataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 39651747 - 39651803
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  39651747 aattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttta 39651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 28361551 - 28361503
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  28361551 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataa 28361503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 34663868 - 34663912
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaa 65  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  34663868 accaaaaaataataaattcaaagttttgtacaatattttgccaaa 34663912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 40952041 - 40952093
Alignment:
Q  44 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  40952041 ttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 51187618 - 51187690
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| | |||||||| ||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||||    
T  51187618 aaaaaatattaaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataacttcagaact 51187690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 25881932 - 25881982
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataa 25881982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 8151214 - 8151274
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||| |||||| |||||| ||||||||| |||||||| |||||||||    
T  8151214 aattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaact 8151274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 24631181 - 24631113
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    |||| ||||||||||||| |||||||||| || ||||||||||| ||||||| ||||||||| |||||||    
T  24631181 acaccaccaaaaaataataaattcaaagtatt-tacaatatttttccaaacaacttttaacttaaaaata 24631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 45472509 - 45472468
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  45472509 aaaaaataataaattcaaagttttgtacaatattttgccaaa 45472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 30071346 - 30071414
Alignment:
Q  28 aataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| |||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||| ||||    
T  30071346 aataataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataact 30071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 52620639 - 52620680
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  52620639 aaaaaataataaattcagagttttgtacaatattttgccaaa 52620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 10262069 - 10262027
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  10262069 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 10262027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 21562386 - 21562428
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  21562386 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 21562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 24080140 - 24080098
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  24080140 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 24080098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 29346288 - 29346238
Alignment:
Q  34 taattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  29346288 taattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 29346238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 35832052 - 35832002
Alignment:
Q  34 taattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  35832052 taattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 35832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 43329907 - 43329949
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  43329907 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 43329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 41105971 - 41106012
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaa 82  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  41105971 aagttttatacaatattttgccaaacaacttttaacttaaaa 41106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 9097521 - 9097481
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    ||||||||||||||||||||||| | ||||||| |||||||    
T  9097521 tttgtacaatattttgccaaacaacatttaacttaaaaata 9097481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 45019262 - 45019226
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgt 49  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  45019262 cagacaccaccaaaaaataataaattcaaagttttgt 45019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 970945 - 971028
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  970945 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 971028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 1835677 - 1835760
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1835677 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1835760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 5166258 - 5166341
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5166258 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 5166341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7233015 - 7233098
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7233015 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 8878111 - 8878194
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8878111 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 8878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 31972274 - 31972357
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31972274 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 24926165 - 24926085
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24926165 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 18166908 - 18166833
Alignment:
Q  21 accaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18166908 accaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18166833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36086030 - 36085947
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36086030 cagacaccaccaaaaagtaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 36085947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 8683652 - 8683734
Alignment:
Q  14 agacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8683652 agacaccaccaaaaaataataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact 8683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 7274664 - 7274745
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7274664 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7274745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 3324347 - 3324264
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  3324347 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact 3324264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 4631211 - 4631281
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4631211 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 4631281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 3243367 - 3243295
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  3243367 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 3243295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 34912654 - 34912724
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  34912654 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 34912724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 36078628 - 36078556
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  36078628 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaact 36078556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 38879139 - 38879211
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  38879139 aaaaaataataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 668375 - 668294
Alignment:
Q  15 gacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||| ||||||||||||| |||||||| |||||| ||||||||||||||||| ||||||| | ||||||||||||||||||    
T  668375 gacaccaccaaaaaataataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaact 668294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 3079720 - 3079792
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||    
T  3079720 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 3079792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 10120612 - 10120684
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  10120612 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 10120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40202218 - 40202290
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  40202218 aaaaaataataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact 40202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 41452829 - 41452890
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  41452829 aatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41452890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 45474736 - 45474797
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  45474736 aattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 35423789 - 35423861
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||    
T  35423789 aaaaaataataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact 35423861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 17032896 - 17032813
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| || |||||| ||  ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  17032896 cagacaccacaaaaaaaaaaaaaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 17032813  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 20313294 - 20313248
Alignment:
Q  50 acaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaact 20313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 38709709 - 38709765
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  38709709 aattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 1117981 - 1118055
Alignment:
Q  24 aaaaaataattaattcaaagttt--tgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||   |||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  1117981 aaaaaataataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 1118055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 9799397 - 9799330
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||| |||||||    
T  9799397 aaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaacttta 9799330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 2180035 - 2180093
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||    
T  2180035 tcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 38959687 - 38959644
Alignment:
Q  53 atattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  38959687 atattttgtcaaacagcttttaactcaaaaataattttagaact 38959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 17051221 - 17051167
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||| || |||||||||| ||||| | |||||||||||||||||||||||||    
T  17051221 cagacaccacaaaaaaataataaattctatgttttgtacaatattttgccaaaca 17051167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 3708454 - 3708496
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  3708454 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 3708496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 11868962 - 11868920
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  11868962 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 11868920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 35360355 - 35360313
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  35360355 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 35360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 37522713 - 37522763
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 88  Q
    ||||| |||||||||| |||||||||||||  |||||||| ||||||||||    
T  37522713 tcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 1465 - 1548
Alignment:
Q  13 cagacactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1465 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 4592 - 4512
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4592 acaccaccaaaaaataataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 7442 - 7522
Alignment:
Q  16 acactaccaaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7442 acaccaccaaaaaataataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 7364 - 7292
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7364 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 90533 - 90463
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  90533 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 90463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 110585 - 110529
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||  ||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  110585 tcaaagtttcttacaatattttgctaaacaacttttaacttaaaaataactttagaa 110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 15333 - 15261
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  15333 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 15261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 7646 - 7574
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  7646 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 6375 - 6306
Alignment:
Q  24 aaaaaataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaga 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  6375 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 132647 - 132730
Alignment:
Q  13 cagacactaccaaaaa-ataattaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||| |||||||| ||||| |||| |||||||  ||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  132647 cagacacaaccaaaaagataataaattgaaagttta-tacaatattttgccaaacaacttttaaattaaaaataactttagaact 132730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 138090 - 138031
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 94  Q
    |||||||||| |||| ||||||||||| ||||| ||||||||| ||||||||||||||||    
T  138090 aattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataactttagaa 138031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 229101 - 229156
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 1072 - 1127
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  1072 aagttttgaaaaatattttgccaaacaacttttaacttaaaaataactttaaaact 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 5793 - 5732
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaa-aaataactttagaact 96  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| || ||||||||||| ||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactttaaaact 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 31632 - 31572
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 96  Q
    |||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||| ||||    
T  31632 aattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 31572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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