View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1241_low_32 (Length: 254)
Name: NF1241_low_32
Description: NF1241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1241_low_32 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4094193 - 4094418
Alignment:
| Q |
1 |
taagatattttgtgtgattttgtctaaaaattgcaaggttaagaagagttaagacaactcttgcatgtgtacatcaactaggttccacttttagtttcca |
100 |
Q |
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| T |
4094193 |
taagatattttgtgtgactttgtctaaaaattgcaaggttaagaagagttaagacaactcttgcatgtgtacatcaactaggttccacttttagtttcca |
4094292 |
T |
|
| Q |
101 |
tcagagtaatatacagtcacaaattaatccttgttcctatactcatttaaagaacctttcatactaaagctttcaagtgtaattaattacataaggctaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4094293 |
tcagagtaatatacagtcacaaattaatccttgttcctatactcatttaaagaacctttcatactaaagctttcaagtgtaattaattacataaggctaa |
4094392 |
T |
|
| Q |
201 |
ttgtaccaaccaatttaattgtttgt |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
4094393 |
ttgtaccaaccaatttaattgtttgt |
4094418 |
T |
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