View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1241_low_33 (Length: 252)
Name: NF1241_low_33
Description: NF1241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1241_low_33 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 36653077 - 36653321
Alignment:
| Q |
8 |
tagcataggatcatacttgaacttctcatcaggattaactaaatcccatttgaaacgtttcacaatattatgcataaaaacaagtatctctaaccgagca |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36653077 |
tagcataggatcatacttgaacttctcatcaggattaactaaatcccatttgaaacgtttcacaatattatgcataaaaacaagtatctctaaccgagca |
36653176 |
T |
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| Q |
108 |
aactcttgtcccaaacacattctaggtcctcctccaaatggaacatatgaataaggtgttggcccttctccttcaaaccttgaagcatcaaatttttcag |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36653177 |
aactcttgtcccaaacacattctaggtcctcctccaaatggaacatatgaataaggtgttggcccttctccttcaaaccttgaagcatcaaatttttcag |
36653276 |
T |
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| Q |
208 |
gatttgaaaacagtgttggatccatgtgtgttgtatgtgtgttcc |
252 |
Q |
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| T |
36653277 |
gatttgaaaacagtgttggatccatgtgtgttgtatgtgtgttcc |
36653321 |
T |
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