View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1241_low_9 (Length: 430)
Name: NF1241_low_9
Description: NF1241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1241_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 3 - 401
Target Start/End: Original strand, 6032403 - 6032801
Alignment:
| Q |
3 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
102 |
Q |
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| T |
6032403 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
6032502 |
T |
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| Q |
103 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttcttctcatcattatcaacaaaa |
202 |
Q |
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| T |
6032503 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttcttctcatcattatcaacaaaa |
6032602 |
T |
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| Q |
203 |
cactaatttgatccctaaggaagctagttttgatcatgactctccaatgttatcaccaaattgggatgctaataataataacaatgatgctgccactgga |
302 |
Q |
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| T |
6032603 |
cactaatttgatccctaaggaagctagttttgatcatgactctccaatgttatcaccaaattgggatgctaataataataacaatgatgctgccactgga |
6032702 |
T |
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| Q |
303 |
agatccaacttttctgcaatatcaagaatgaatctatcatcaggtaactagtgtttttctttatttgataattgtttcactgtttcaaaacataaaatt |
401 |
Q |
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| T |
6032703 |
agatccaacttttctgcaatatcaagaatgaatctatcatcaggtaactagtgtttttctttatttgataattgtttcactgtttcaaaacataaaatt |
6032801 |
T |
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