View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12420_low_11 (Length: 220)
Name: NF12420_low_11
Description: NF12420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12420_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 34501457 - 34501661
Alignment:
| Q |
1 |
gcagatgcggcatttccaggatatgaagcagaccacaagcaaattccactcctgcatcagtaaacccaagtccagttaacaaaaaatccaatgacccaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501457 |
gcagatgcggcatttccaggatatgaagcagaccacaagcaaattccactcctgcatcagtaaacccaagtccagttaacaaaaaatccaatgacccaac |
34501556 |
T |
|
| Q |
101 |
aattgacactgtacaaccgagcacaaagacagaaactcacttgctaccaacagcaagcatcctcccaccattaggcctccactctaacacattaacatct |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501557 |
aattgacattgtacaaccgagcacaaagacagaaactcacttgctaccaacagcaagcatcctcccaccattaggcctccactctaacacattaacatct |
34501656 |
T |
|
| Q |
201 |
ctctg |
205 |
Q |
| |
|
||||| |
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| T |
34501657 |
ctctg |
34501661 |
T |
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