View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12423_high_5 (Length: 332)

Name: NF12423_high_5
Description: NF12423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12423_high_5
NF12423_high_5
[»] chr8 (57 HSPs)
chr8 (1-317)||(33553162-33553478)
chr8 (86-218)||(4560509-4560641)
chr8 (88-239)||(30191051-30191202)
chr8 (25-153)||(20672696-20672824)
chr8 (49-123)||(40280253-40280327)
chr8 (24-196)||(14949811-14949983)
chr8 (85-179)||(7918416-7918510)
chr8 (107-238)||(9700029-9700160)
chr8 (49-196)||(13000377-13000524)
chr8 (85-235)||(7714248-7714398)
chr8 (86-212)||(11813042-11813168)
chr8 (86-179)||(4055586-4055679)
chr8 (85-127)||(4762515-4762557)
chr8 (85-218)||(39551140-39551273)
chr8 (82-156)||(39866727-39866803)
chr8 (86-170)||(11183552-11183636)
chr8 (89-153)||(11795102-11795166)
chr8 (25-123)||(10547127-10547226)
chr8 (88-127)||(11494155-11494194)
chr8 (88-155)||(25869260-25869327)
chr8 (86-128)||(1640372-1640414)
chr8 (85-127)||(7918795-7918837)
chr8 (86-196)||(11569410-11569520)
chr8 (82-156)||(21653084-21653158)
chr8 (88-218)||(26479794-26479924)
chr8 (85-155)||(38421270-38421340)
chr8 (142-239)||(2487918-2488015)
chr8 (66-127)||(14929160-14929221)
chr8 (86-127)||(27028838-27028879)
chr8 (86-151)||(28769337-28769402)
chr8 (82-127)||(39881774-39881819)
chr8 (106-178)||(6950349-6950421)
chr8 (86-170)||(6966892-6966976)
chr8 (86-218)||(11415161-11415293)
chr8 (85-153)||(39561537-39561605)
chr8 (86-138)||(43504758-43504810)
chr8 (86-121)||(9836882-9836917)
chr8 (88-127)||(42215104-42215143)
chr8 (66-101)||(43907869-43907904)
chr8 (86-144)||(8062336-8062394)
chr8 (88-178)||(9540967-9541057)
chr8 (86-160)||(31862500-31862574)
chr8 (98-168)||(31875576-31875646)
chr8 (86-116)||(40014922-40014952)
chr8 (86-179)||(6509273-6509366)
chr8 (86-230)||(34849110-34849255)
chr8 (86-151)||(42370359-42370424)
chr8 (86-127)||(44236845-44236886)
chr8 (86-118)||(2107360-2107392)
chr8 (86-126)||(2235679-2235719)
chr8 (85-153)||(2458562-2458630)
chr8 (182-234)||(18331817-18331869)
chr8 (86-197)||(26410286-26410398)
chr8 (87-127)||(27754412-27754452)
chr8 (86-217)||(38874653-38874785)
chr8 (86-186)||(41620254-41620354)
chr8 (142-218)||(43368631-43368707)
[»] chr3 (84 HSPs)
chr3 (86-219)||(37273141-37273274)
chr3 (66-198)||(52323845-52323979)
chr3 (85-236)||(43115062-43115213)
chr3 (24-153)||(16790375-16790503)
chr3 (86-217)||(31010409-31010540)
chr3 (85-235)||(36646296-36646446)
chr3 (85-169)||(48048962-48049046)
chr3 (86-217)||(31710819-31710950)
chr3 (86-217)||(31711074-31711205)
chr3 (25-156)||(36200042-36200173)
chr3 (25-127)||(44284102-44284204)
chr3 (163-240)||(5407363-5407440)
chr3 (86-151)||(20669179-20669244)
chr3 (88-197)||(26542546-26542655)
chr3 (86-187)||(27290863-27290964)
chr3 (86-235)||(30573829-30573977)
chr3 (66-123)||(37307941-37307997)
chr3 (25-101)||(39971243-39971319)
chr3 (88-179)||(21574499-21574590)
chr3 (66-153)||(37825109-37825196)
chr3 (164-235)||(51929826-51929897)
chr3 (86-144)||(2719475-2719533)
chr3 (86-120)||(33965518-33965552)
chr3 (85-155)||(36887510-36887580)
chr3 (94-196)||(42745053-42745155)
chr3 (89-218)||(11253511-11253640)
chr3 (86-219)||(24624217-24624350)
chr3 (93-170)||(29771852-29771929)
chr3 (86-179)||(50600148-50600241)
chr3 (86-218)||(2923485-2923617)
chr3 (69-125)||(12985369-12985425)
chr3 (107-207)||(20192548-20192648)
chr3 (85-137)||(21367673-21367725)
chr3 (86-150)||(40665436-40665500)
chr3 (86-214)||(41644380-41644508)
chr3 (87-127)||(47904085-47904125)
chr3 (25-169)||(48528502-48528646)
chr3 (109-192)||(11039296-11039379)
chr3 (85-160)||(16609891-16609966)
chr3 (85-160)||(22049287-22049362)
chr3 (88-219)||(22667413-22667543)
chr3 (88-219)||(22724052-22724182)
chr3 (98-153)||(36139897-36139952)
chr3 (52-152)||(49586933-49587035)
chr3 (89-127)||(482814-482852)
chr3 (86-176)||(1217773-1217863)
chr3 (88-126)||(2825156-2825194)
chr3 (49-95)||(10101552-10101598)
chr3 (49-95)||(10212477-10212523)
chr3 (89-127)||(13371127-13371165)
chr3 (69-127)||(13413920-13413978)
chr3 (85-191)||(14548679-14548785)
chr3 (164-230)||(21872214-21872280)
chr3 (82-124)||(22031199-22031241)
chr3 (86-124)||(24158528-24158566)
chr3 (86-152)||(24887281-24887346)
chr3 (86-187)||(39602172-39602273)
chr3 (22-96)||(40122827-40122901)
chr3 (82-152)||(45432936-45433006)
chr3 (86-152)||(52619010-52619076)
chr3 (85-146)||(237403-237464)
chr3 (133-218)||(2100110-2100195)
chr3 (85-126)||(8933793-8933834)
chr3 (85-138)||(9279337-9279390)
chr3 (86-127)||(20502090-20502131)
chr3 (85-138)||(25776123-25776176)
chr3 (85-138)||(43948661-43948714)
chr3 (109-166)||(50004682-50004739)
chr3 (85-126)||(51510216-51510257)
chr3 (86-126)||(2071063-2071103)
chr3 (86-126)||(20170731-20170771)
chr3 (91-147)||(21862177-21862233)
chr3 (85-149)||(22214659-22214723)
chr3 (63-95)||(23315588-23315620)
chr3 (83-127)||(23793588-23793632)
chr3 (86-218)||(24603683-24603815)
chr3 (86-218)||(30923830-30923961)
chr3 (86-186)||(33725837-33725937)
chr3 (86-138)||(35394509-35394561)
chr3 (142-230)||(41164909-41164997)
chr3 (86-166)||(41452530-41452610)
chr3 (88-152)||(44488892-44488956)
chr3 (66-126)||(46407917-46407977)
chr3 (93-153)||(50952347-50952407)
[»] chr5 (69 HSPs)
chr5 (66-218)||(11457086-11457237)
chr5 (86-217)||(32172660-32172791)
chr5 (93-219)||(12521542-12521668)
chr5 (52-170)||(12242689-12242807)
chr5 (67-179)||(36774677-36774789)
chr5 (82-170)||(37611194-37611282)
chr5 (82-170)||(37787924-37788012)
chr5 (86-219)||(17258813-17258946)
chr5 (71-213)||(17259209-17259351)
chr5 (85-210)||(10272370-10272495)
chr5 (85-166)||(15074732-15074813)
chr5 (66-155)||(985598-985689)
chr5 (85-156)||(17368682-17368753)
chr5 (86-228)||(7674655-7674796)
chr5 (100-218)||(8089957-8090075)
chr5 (52-197)||(10280551-10280695)
chr5 (107-196)||(28586719-28586808)
chr5 (88-153)||(32408588-32408653)
chr5 (86-179)||(35095756-35095849)
chr5 (86-138)||(9202759-9202811)
chr5 (86-170)||(13604828-13604912)
chr5 (86-218)||(26004928-26005060)
chr5 (50-127)||(29116972-29117051)
chr5 (85-153)||(40205070-40205138)
chr5 (66-178)||(41052855-41052967)
chr5 (90-197)||(4619718-4619825)
chr5 (85-152)||(5284445-5284512)
chr5 (86-153)||(21768193-21768260)
chr5 (86-153)||(36639529-36639596)
chr5 (86-176)||(2092518-2092608)
chr5 (86-144)||(7319013-7319071)
chr5 (86-144)||(18906349-18906407)
chr5 (85-219)||(40534205-40534339)
chr5 (86-176)||(41957424-41957514)
chr5 (97-230)||(8177451-8177584)
chr5 (23-92)||(17756808-17756877)
chr5 (133-238)||(38047790-38047895)
chr5 (86-138)||(443942-443994)
chr5 (88-152)||(2468440-2468504)
chr5 (86-138)||(4014435-4014487)
chr5 (85-153)||(18543193-18543260)
chr5 (85-218)||(4855704-4855834)
chr5 (115-190)||(10907414-10907489)
chr5 (82-213)||(34975367-34975498)
chr5 (89-236)||(35960423-35960569)
chr5 (86-152)||(11707062-11707128)
chr5 (89-195)||(30217092-30217197)
chr5 (86-124)||(33533564-33533602)
chr5 (89-127)||(38104879-38104917)
chr5 (85-170)||(5951947-5952032)
chr5 (85-170)||(18704016-18704100)
chr5 (86-127)||(29588886-29588927)
chr5 (145-218)||(32849244-32849317)
chr5 (85-170)||(34690879-34690964)
chr5 (85-138)||(36318780-36318833)
chr5 (86-151)||(36638754-36638819)
chr5 (85-138)||(37588371-37588424)
chr5 (90-170)||(38829617-38829695)
chr5 (86-126)||(1084144-1084184)
chr5 (184-232)||(5377114-5377162)
chr5 (86-138)||(11615508-11615560)
chr5 (107-195)||(11700332-11700420)
chr5 (49-101)||(18897744-18897796)
chr5 (90-138)||(18902806-18902854)
chr5 (86-150)||(26383372-26383436)
chr5 (90-138)||(28413295-28413343)
chr5 (86-218)||(38033958-38034090)
chr5 (86-126)||(39105471-39105511)
chr5 (23-91)||(40097483-40097551)
[»] chr2 (87 HSPs)
chr2 (86-218)||(32821816-32821948)
chr2 (88-168)||(34652017-34652097)
chr2 (85-214)||(35485923-35486052)
chr2 (82-218)||(15120186-15120322)
chr2 (85-237)||(10563472-10563622)
chr2 (104-229)||(11063218-11063343)
chr2 (86-218)||(43141878-43142011)
chr2 (86-156)||(1939325-1939395)
chr2 (86-218)||(3235315-3235447)
chr2 (74-218)||(43456638-43456782)
chr2 (66-197)||(7282983-7283114)
chr2 (111-218)||(18884899-18885006)
chr2 (95-150)||(35329817-35329872)
chr2 (86-176)||(1742005-1742095)
chr2 (145-219)||(25609862-25609936)
chr2 (85-127)||(43985025-43985067)
chr2 (86-155)||(36852479-36852548)
chr2 (85-170)||(43065429-43065514)
chr2 (85-218)||(43985215-43985348)
chr2 (85-217)||(14299563-14299695)
chr2 (66-195)||(31228791-31228922)
chr2 (143-230)||(40943977-40944064)
chr2 (85-176)||(43635074-43635165)
chr2 (86-219)||(15377772-15377905)
chr2 (82-124)||(36863650-36863692)
chr2 (71-153)||(41144202-41144284)
chr2 (112-233)||(787365-787486)
chr2 (86-127)||(7871650-7871691)
chr2 (82-235)||(12313087-12313240)
chr2 (133-218)||(28803461-28803546)
chr2 (82-179)||(28933827-28933923)
chr2 (87-176)||(33256748-33256837)
chr2 (86-127)||(35379038-35379079)
chr2 (95-196)||(41809198-41809299)
chr2 (66-179)||(44606080-44606193)
chr2 (86-126)||(3067402-3067442)
chr2 (201-241)||(3312199-3312239)
chr2 (23-95)||(3673729-3673801)
chr2 (144-240)||(9996803-9996899)
chr2 (88-176)||(42131626-42131714)
chr2 (86-126)||(43259841-43259881)
chr2 (88-127)||(1056375-1056414)
chr2 (85-124)||(6988121-6988160)
chr2 (86-156)||(9174822-9174893)
chr2 (69-112)||(11956228-11956271)
chr2 (142-197)||(16947089-16947143)
chr2 (142-197)||(17017754-17017808)
chr2 (89-228)||(18179161-18179300)
chr2 (88-179)||(25661116-25661207)
chr2 (86-153)||(29316771-29316838)
chr2 (52-127)||(32098352-32098427)
chr2 (52-115)||(33061266-33061329)
chr2 (85-127)||(1810670-1810712)
chr2 (69-127)||(3227705-3227763)
chr2 (109-179)||(11063518-11063588)
chr2 (86-124)||(16867746-16867784)
chr2 (107-197)||(27237845-27237935)
chr2 (25-95)||(35809857-35809926)
chr2 (85-127)||(40837457-40837499)
chr2 (88-153)||(680512-680577)
chr2 (66-118)||(750461-750514)
chr2 (109-178)||(1830075-1830144)
chr2 (191-240)||(7928207-7928256)
chr2 (203-236)||(13325694-13325727)
chr2 (145-218)||(14277824-14277897)
chr2 (85-126)||(15780083-15780124)
chr2 (145-218)||(22878164-22878237)
chr2 (170-239)||(28810362-28810431)
chr2 (182-219)||(34054835-34054872)
chr2 (85-126)||(38078433-38078474)
chr2 (70-194)||(38388678-38388802)
chr2 (40-101)||(40672866-40672927)
chr2 (88-165)||(41042006-41042083)
chr2 (86-167)||(43205316-43205397)
chr2 (86-127)||(43591532-43591573)
chr2 (86-127)||(44644285-44644326)
chr2 (86-126)||(3078663-3078703)
chr2 (130-194)||(9878637-9878701)
chr2 (111-155)||(10285892-10285936)
chr2 (94-138)||(12464679-12464723)
chr2 (96-156)||(14451043-14451103)
chr2 (91-218)||(16503364-16503492)
chr2 (23-95)||(18962114-18962186)
chr2 (72-127)||(35391151-35391204)
chr2 (182-218)||(40759263-40759299)
chr2 (86-126)||(42817399-42817439)
chr2 (182-238)||(43259938-43259994)
[»] chr6 (58 HSPs)
chr6 (88-218)||(2455819-2455949)
chr6 (66-127)||(2205612-2205673)
chr6 (67-228)||(31583667-31583827)
chr6 (90-197)||(281800-281907)
chr6 (88-171)||(4420652-4420735)
chr6 (85-239)||(10476032-10476185)
chr6 (94-230)||(2460070-2460206)
chr6 (82-197)||(10031735-10031850)
chr6 (92-170)||(34939526-34939604)
chr6 (93-170)||(32577965-32578042)
chr6 (85-153)||(5564124-5564192)
chr6 (94-217)||(8420129-8420252)
chr6 (87-218)||(30863254-30863385)
chr6 (105-179)||(9027604-9027678)
chr6 (90-216)||(34939755-34939881)
chr6 (87-176)||(10616514-10616603)
chr6 (86-235)||(28088137-28088285)
chr6 (88-215)||(3155185-3155311)
chr6 (85-172)||(7931703-7931790)
chr6 (85-156)||(9667978-9668049)
chr6 (86-153)||(27894053-27894120)
chr6 (85-196)||(32975984-32976095)
chr6 (66-156)||(4324446-4324536)
chr6 (88-218)||(7148675-7148805)
chr6 (95-153)||(13908479-13908537)
chr6 (86-152)||(19275633-19275699)
chr6 (133-195)||(32917251-32917313)
chr6 (82-127)||(26694881-26694926)
chr6 (85-126)||(31812036-31812077)
chr6 (130-235)||(33284294-33284398)
chr6 (86-218)||(3181000-3181131)
chr6 (86-218)||(32171314-32171446)
chr6 (86-133)||(1401116-1401163)
chr6 (86-153)||(3168257-3168324)
chr6 (104-155)||(6536972-6537023)
chr6 (86-153)||(6647394-6647461)
chr6 (85-124)||(25100049-25100088)
chr6 (88-170)||(2034425-2034507)
chr6 (85-123)||(13907853-13907891)
chr6 (89-127)||(20512666-20512704)
chr6 (87-133)||(24836218-24836264)
chr6 (86-156)||(34403862-34403932)
chr6 (85-214)||(2023321-2023450)
chr6 (87-156)||(3528811-3528880)
chr6 (141-230)||(7901750-7901838)
chr6 (86-127)||(33787767-33787808)
chr6 (183-232)||(35070384-35070433)
chr6 (109-197)||(283125-283213)
chr6 (106-170)||(725634-725698)
chr6 (87-127)||(835271-835311)
chr6 (85-169)||(2117409-2117493)
chr6 (130-230)||(2456993-2457092)
chr6 (97-153)||(7785740-7785796)
chr6 (82-122)||(24811108-24811148)
chr6 (40-92)||(24836278-24836330)
chr6 (133-217)||(27857412-27857496)
chr6 (107-151)||(27909636-27909680)
chr6 (90-126)||(30523948-30523984)
[»] chr4 (67 HSPs)
chr4 (85-220)||(2996579-2996714)
chr4 (86-219)||(21157775-21157908)
chr4 (85-219)||(4798496-4798630)
chr4 (140-236)||(25717654-25717750)
chr4 (85-230)||(11264307-11264452)
chr4 (86-179)||(23819096-23819189)
chr4 (94-230)||(27123271-27123407)
chr4 (21-127)||(4191659-4191766)
chr4 (28-217)||(47970245-47970434)
chr4 (39-145)||(5131254-5131364)
chr4 (86-234)||(14011241-14011389)
chr4 (66-189)||(21043195-21043318)
chr4 (85-179)||(6978932-6979026)
chr4 (86-219)||(28615530-28615664)
chr4 (21-95)||(30024620-30024694)
chr4 (133-238)||(3639079-3639184)
chr4 (86-127)||(47800630-47800671)
chr4 (85-126)||(52735128-52735169)
chr4 (49-153)||(35743252-35743356)
chr4 (82-218)||(45128241-45128377)
chr4 (86-216)||(18628486-18628606)
chr4 (85-175)||(29263376-29263467)
chr4 (86-145)||(53673662-53673721)
chr4 (97-179)||(6987711-6987793)
chr4 (90-228)||(29375915-29376052)
chr4 (85-151)||(30207569-30207635)
chr4 (85-155)||(42121494-42121563)
chr4 (85-126)||(29778801-29778842)
chr4 (24-153)||(51555886-51556014)
chr4 (86-166)||(4471175-4471255)
chr4 (140-216)||(8328052-8328128)
chr4 (86-126)||(18011878-18011918)
chr4 (112-176)||(21592979-21593043)
chr4 (85-218)||(24370882-24371017)
chr4 (186-238)||(29126174-29126226)
chr4 (85-156)||(19250552-19250623)
chr4 (107-190)||(19394722-19394805)
chr4 (88-151)||(28300297-28300360)
chr4 (85-156)||(30631962-30632033)
chr4 (66-101)||(52294036-52294071)
chr4 (69-127)||(4500836-4500894)
chr4 (104-218)||(6428043-6428157)
chr4 (85-127)||(11158379-11158421)
chr4 (64-138)||(19429694-19429768)
chr4 (99-153)||(22684517-22684571)
chr4 (107-153)||(29467620-29467666)
chr4 (85-127)||(49219145-49219187)
chr4 (86-156)||(50800023-50800092)
chr4 (85-126)||(2111073-2111114)
chr4 (89-166)||(2874607-2874684)
chr4 (81-118)||(7730626-7730663)
chr4 (81-118)||(11262794-11262831)
chr4 (85-126)||(17822888-17822929)
chr4 (89-214)||(28232555-28232680)
chr4 (86-155)||(55547038-55547107)
chr4 (93-176)||(2592281-2592365)
chr4 (107-179)||(2838292-2838363)
chr4 (86-150)||(7694009-7694073)
chr4 (86-126)||(17975392-17975432)
chr4 (162-218)||(25487488-25487544)
chr4 (140-244)||(25896845-25896949)
chr4 (86-154)||(27721724-27721792)
chr4 (85-125)||(28615340-28615380)
chr4 (133-193)||(41097212-41097272)
chr4 (162-218)||(46860001-46860057)
chr4 (52-123)||(51044506-51044578)
chr4 (183-239)||(52169930-52169986)
[»] chr1 (88 HSPs)
chr1 (66-195)||(23373267-23373395)
chr1 (90-230)||(32515360-32515500)
chr1 (110-220)||(15581285-15581395)
chr1 (39-236)||(6976886-6977081)
chr1 (69-166)||(29834888-29834985)
chr1 (90-219)||(31517670-31517799)
chr1 (21-153)||(4202147-4202279)
chr1 (89-156)||(37593677-37593744)
chr1 (88-218)||(10199339-10199469)
chr1 (94-179)||(15579497-15579582)
chr1 (88-196)||(44031952-44032060)
chr1 (85-156)||(45205074-45205145)
chr1 (23-126)||(48748628-48748730)
chr1 (49-103)||(14737773-14737827)
chr1 (88-230)||(43420267-43420409)
chr1 (85-218)||(12564430-12564563)
chr1 (39-120)||(50319230-50319311)
chr1 (86-218)||(4622100-4622232)
chr1 (86-234)||(4868407-4868554)
chr1 (86-218)||(27140485-27140617)
chr1 (86-197)||(38867785-38867894)
chr1 (83-218)||(3597212-3597347)
chr1 (88-127)||(5047155-5047194)
chr1 (88-231)||(6292502-6292644)
chr1 (86-153)||(34290243-34290310)
chr1 (23-126)||(38651454-38651557)
chr1 (86-153)||(43332491-43332558)
chr1 (88-218)||(6279408-6279538)
chr1 (88-170)||(7262497-7262579)
chr1 (95-193)||(28935832-28935930)
chr1 (66-153)||(46499870-46499959)
chr1 (85-146)||(12564877-12564938)
chr1 (86-179)||(16322856-16322949)
chr1 (168-237)||(21002244-21002313)
chr1 (95-180)||(30259455-30259540)
chr1 (86-156)||(35350643-35350717)
chr1 (85-150)||(37842354-37842419)
chr1 (108-193)||(37941941-37942026)
chr1 (85-153)||(24460403-24460471)
chr1 (90-230)||(26461860-26462000)
chr1 (93-153)||(28689448-28689508)
chr1 (86-218)||(33723313-33723445)
chr1 (88-176)||(35080043-35080130)
chr1 (85-153)||(35925696-35925764)
chr1 (92-156)||(46252675-46252739)
chr1 (87-151)||(47020515-47020579)
chr1 (86-217)||(3224430-3224561)
chr1 (141-228)||(4549462-4549549)
chr1 (85-124)||(5150943-5150982)
chr1 (88-159)||(12477277-12477348)
chr1 (90-153)||(26184759-26184822)
chr1 (85-124)||(26779950-26779989)
chr1 (112-215)||(29723522-29723625)
chr1 (85-152)||(30257689-30257756)
chr1 (85-124)||(32548656-32548695)
chr1 (142-197)||(40485725-40485780)
chr1 (86-188)||(51695455-51695558)
chr1 (86-156)||(6231809-6231879)
chr1 (89-127)||(11893615-11893653)
chr1 (115-169)||(17628635-17628689)
chr1 (85-127)||(32182277-32182319)
chr1 (86-152)||(35017583-35017649)
chr1 (89-127)||(35590914-35590952)
chr1 (49-124)||(42169587-42169664)
chr1 (85-138)||(219562-219615)
chr1 (182-227)||(2832075-2832120)
chr1 (86-127)||(7137020-7137061)
chr1 (86-127)||(7472318-7472359)
chr1 (107-172)||(11639393-11639458)
chr1 (143-228)||(18327067-18327152)
chr1 (86-127)||(21254769-21254810)
chr1 (66-127)||(28077091-28077152)
chr1 (85-146)||(39347970-39348031)
chr1 (88-153)||(44422708-44422773)
chr1 (93-122)||(49365788-49365817)
chr1 (49-94)||(49517018-49517063)
chr1 (85-125)||(3924630-3924670)
chr1 (88-156)||(4699608-4699676)
chr1 (142-218)||(4757401-4757477)
chr1 (162-238)||(9507314-9507390)
chr1 (98-218)||(10439705-10439825)
chr1 (25-96)||(11639491-11639560)
chr1 (70-102)||(26293175-26293207)
chr1 (85-153)||(27963366-27963434)
chr1 (85-153)||(31118049-31118117)
chr1 (130-222)||(44928118-44928210)
chr1 (86-138)||(45975697-45975749)
chr1 (83-115)||(49173397-49173429)
[»] chr7 (50 HSPs)
chr7 (24-178)||(7244625-7244779)
chr7 (94-238)||(33894642-33894786)
chr7 (85-235)||(48157032-48157184)
chr7 (85-218)||(46104498-46104631)
chr7 (86-189)||(4966163-4966266)
chr7 (107-218)||(12234820-12234931)
chr7 (85-152)||(44151477-44151544)
chr7 (104-230)||(44808183-44808309)
chr7 (86-215)||(33645894-33646023)
chr7 (85-149)||(24363601-24363665)
chr7 (85-133)||(48917362-48917410)
chr7 (88-127)||(12792520-12792559)
chr7 (88-127)||(12792585-12792624)
chr7 (88-127)||(12792646-12792685)
chr7 (89-168)||(27626104-27626183)
chr7 (109-171)||(39551526-39551588)
chr7 (85-127)||(44241865-44241907)
chr7 (86-155)||(529382-529451)
chr7 (70-127)||(22551427-22551484)
chr7 (86-179)||(39334200-39334293)
chr7 (88-197)||(45859479-45859587)
chr7 (85-126)||(46086453-46086494)
chr7 (66-127)||(5017962-5018025)
chr7 (86-126)||(15321807-15321847)
chr7 (88-240)||(25596042-25596193)
chr7 (93-213)||(28165105-28165225)
chr7 (39-95)||(35536045-35536101)
chr7 (82-126)||(46056033-46056077)
chr7 (52-95)||(1417215-1417258)
chr7 (40-95)||(23918896-23918951)
chr7 (83-218)||(25670517-25670652)
chr7 (86-189)||(39345478-39345581)
chr7 (85-124)||(40439060-40439099)
chr7 (85-219)||(3610670-3610804)
chr7 (86-156)||(12110367-12110437)
chr7 (84-218)||(28691767-28691900)
chr7 (49-95)||(39591543-39591589)
chr7 (140-217)||(8427074-8427151)
chr7 (85-156)||(11208455-11208523)
chr7 (70-179)||(24967052-24967161)
chr7 (117-218)||(36598287-36598388)
chr7 (86-179)||(39360030-39360123)
chr7 (107-219)||(10079269-10079380)
chr7 (201-237)||(17988945-17988981)
chr7 (108-196)||(20553132-20553220)
chr7 (107-155)||(27517850-27517898)
chr7 (182-230)||(29363611-29363659)
chr7 (86-126)||(30812155-30812195)
chr7 (71-156)||(39539774-39539861)
chr7 (52-125)||(42656466-42656541)
[»] scaffold0020 (1 HSPs)
scaffold0020 (86-235)||(159887-160036)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-95)||(27500-27570)
[»] scaffold0003 (1 HSPs)
scaffold0003 (85-167)||(306332-306414)
[»] scaffold0147 (1 HSPs)
scaffold0147 (95-166)||(12687-12758)
[»] scaffold0089 (1 HSPs)
scaffold0089 (89-127)||(33649-33687)
[»] scaffold0311 (1 HSPs)
scaffold0311 (112-197)||(10569-10654)


Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 33553162 - 33553478
Alignment:
Q  1 ttaaccgcttgtatcatattgcgtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagcta 100  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33553162 ttaaccgcttgtatcatattgcctttatcatactagtccttatgtgtgagttatttatatgacataagataaaataaagtcaaattgttttcataagcta 33553261  T
Q  101 tcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33553262 tcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttga 33553361  T
Q  201 tagataagctcaaataagcttatccaaacaagcccttagttaaaattcctattgtgtgacttatatgagatcttcttgtaagtaactttcttcctcttgt 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33553362 tagataagctcaaataagctaatccaaacaagcccttagttaaaattcctattgtgtgacttatatgagatcttcttgtaagtaactttcttcctcttgt 33553461  T
Q  301 agtggttccgcgtgttc 317  Q
    |||||||||||||||||    
T  33553462 agtggttccgcgtgttc 33553478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 4560509 - 4560641
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||| |||| |||| | |||||||||| ||||||| |||  |||||||||  ||||||| |||||||  ||| ||||| ||||||||||| | ||||    
T  4560509 tgttttcttaaggtatcctcaagagcttatcgaaataatctgaaaacagcttactgacatgttataagttatttccataagttcttccaaacaacctcac 4560608  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||||  |||||||||||||||||||    
T  4560609 aagtgcttatgtcaatagataagctcaaataag 4560641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 30191202 - 30191051
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||| |||||||||| ||||  | ||||||||||||||||  ||||  ||  | ||||||||||||||| ||| ||||||||| ||||||||  | ||||    
T  30191202 ttttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaa 30191103  T
Q  188 gtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttag 239  Q
    |||||||||   |||||||| ||||||||||||||| |||||| ||||||||    
T  30191102 gtgcttatgccaatagataaactcaaataagcttatgcaaacaggcccttag 30191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 153
Target Start/End: Original strand, 20672696 - 20672824
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataag 124  Q
    ||||||||| ||| |||||||||  |   ||||||| ||| ||||||||||||||| ||| |||||| |||||||||| || |||||||||| |||||||    
T  20672696 ttatcatataagtgcttatgtgtatgccctttatataacaaaagataaaataaagtcaaactgtttttataagctatcctggagagcttatgaaaataag 20672795  T
Q  125 ctgggaacagcttagggacatgtcataag 153  Q
    |||  ||||||||| | ||||||||||||    
T  20672796 ctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 40280327 - 40280253
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    |||||||| ||  ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  40280327 agttatttctacaacaaaagataaaataaagtaaaattgttttcataagctatctagaagagcttatggaaataa 40280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 14949811 - 14949983
Alignment:
Q  24 tttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    |||||||||  ||| ||||||| | || || || ||| ||| ||||||||||| ||| ||| | ||||||||||||||| | ||||| |||| |||||||    
T  14949811 tttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcataagctatcctaaagagattatagaaataa 14949910  T
Q  124 gctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatg 196  Q
    ||||  ||||||||| ||||||||||||||||  ||  ||||||||| | ||||||  |||||| || |||||    
T  14949911 gctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcacaaatgtttatg 14949983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 7918510 - 7918416
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||| |||||||||||| ||||||||| |||||||| ||| ||||||||| | ||||||| ||||||| ||  ||||||||| ||||||||    
T  7918510 ttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacag 7918416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 9700029 - 9700160
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagata 206  Q
    |||||||||| ||||||| ||  ||||||||| ||||||||||||| ||| ||  | |||||||  |||| ||  ||||||||| ||||| |  ||||||    
T  9700029 agagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagata 9700128  T
Q  207 agctcaaataagcttatccaaacaagccctta 238  Q
    |||||||||||| | ||||||||| |||||||    
T  9700129 agctcaaataagttaatccaaacaggccctta 9700160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 196
Target Start/End: Complemental strand, 13000524 - 13000377
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtc 148  Q
    |||||||||||| ||  || ||||||||| || ||| || |||||||| || || || | |||||||||||||||||||  |||| |||  |||||||||    
T  13000524 agttatttatataaccaaatataaaataatgtcaaactgctttcataaactgtcatgcaaagcttatggaaataagctgaaaacaacttgtggacatgtc 13000425  T
Q  149 ataagttgcttcaataagctcttccaaacagcatcacaagtgcttatg 196  Q
    |||||||| | | |||| ||||| |||| ||  |||||||||||||||    
T  13000424 ataagttgttaccataaactcttgcaaatagtctcacaagtgcttatg 13000377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 7714248 - 7714398
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||| |||||||||| |||||| ||| ||||||| ||  ||||||| |  ||||| |||||||||| ||| | ||||| ||||||||||  |||    
T  7714248 ttgttttcatgagctatcttggagagctcatgaaaataagttgaaaacagctcatcgacatttcataagttgtttccacaagcttttccaaacagtctca 7714347  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    |||||| |||||    || |||||||||||||||   ||||||||| ||||    
T  7714348 caagtgtttatgacattatataagctcaaataagtcaatccaaacatgccc 7714398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 11813168 - 11813042
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||||| |||||||||  |||||||||||  |||||| || ||| ||||||||| ||| ||| ||||| ||| ||| ||||  ||||    
T  11813168 tgttttcataagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatgtcataaattgtttccataagttctcccatacagtttcac 11813069  T
Q  186 aagtgcttatgttgatagataagctca 212  Q
     |||| |||||| | |||||| |||||    
T  11813068 gagtgtttatgtcggtagatatgctca 11813042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 4055679 - 4055586
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||||||||||||||   |||||||| ||||||||||||  ||||| ||| ||||||||||||||||  ||| |||| |||| ||||||||    
T  4055679 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 4055586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 4762515 - 4762557
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  4762515 ttgttttcataagctatcttgaagagcttatgtaaataagctg 4762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 39551273 - 39551140
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||| || || |||||||||  ||||||| |   ||||||||  ||||||||||||||||| ||| ||||  ||| ||||||||  |||    
T  39551273 ttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacagtttca 39551174  T
Q  185 caagtgcttatgttgatagataagctcaaataag 218  Q
    ||| ||||||| |   ||||||| ||||||||||    
T  39551173 caaatgcttatatccgtagataatctcaaataag 39551140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 39866803 - 39866727
Alignment:
Q  82 aaattgttttcata--agctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||||||||||  ||||||||||||||||||||| |||||| |||  ||||||||| |||||||  ||||||||    
T  39866803 aaattgttttcatataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttg 39866727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 11183552 - 11183636
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||| |||||| | || |||||||||||||||||||||  |||||||||  ||||| |||||||||| ||  |||||||||    
T  11183552 tgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataagctct 11183636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 11795102 - 11795166
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||  || |||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  11795102 tttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 10547127 - 10547226
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaa-gtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    ||||||||| ||| ||||||| |||  ||||| ||| ||| ||| ||| ||||| || ||||| ||||||| ||||||||| ||||||||||||||||||    
T  10547127 ttatcatataagtgcttatgtttgacctatttttataacaaaaggtaacataaaagtaaaattattttcattagctatcttaaagagcttatggaaataa 10547226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 11494155 - 11494194
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11494155 ttttcataagctatcttgaagagcttatgaaaataagctg 11494194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 25869327 - 25869260
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||||||| |||||| || |||| ||||||||||||||||  |||| |||| ||||||||||||||||    
T  25869327 ttttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagtt 25869260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 1640414 - 1640372
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgg 128  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  1640414 tgttttcataagctatatttaagagcttatggaaataagctgg 1640372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 7918837 - 7918795
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  7918837 ttgttttcataagctatcttgtagagcttgtggaaataagctg 7918795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 11569520 - 11569410
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| || |||| || || ||||||||||  |||| |||| | |||||||||||| || ||| |||||||||   ||||||  ||||    
T  11569520 tgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcac 11569421  T
Q  186 aagtgcttatg 196  Q
    ||||| |||||    
T  11569420 aagtggttatg 11569410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 21653084 - 21653158
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||| |||||| |||||||||| |||||||||| ||||||||||  || |||||| | || ||||||||||||    
T  21653084 aaattgctttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagttg 21653158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 26479794 - 26479924
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    ||||||||| ||||  || |||||||||||||||| ||||  || | ||||  |||||| ||||||||| ||| |||||||||  |||| ||  ||||||    
T  26479794 ttttcataacctattctggagagcttatggaaatacgctgaaaaaaacttatagacatgacataagttgtttccataagctctcgcaaatagtttcacaa 26479893  T
Q  188 gtgcttatgttgatagataagctcaaataag 218  Q
    || ||| |||  ||||||||||| |||||||    
T  26479894 gtccttgtgtcaatagataagcttaaataag 26479924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 38421270 - 38421340
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    ||||||||| ||||||||||||||| ||| || || |||||||  |||| |||| ||||||||||||||||    
T  38421270 ttgttttcaaaagctatcttgaagatcttgtgtaagtaagctgaaaacaacttatggacatgtcataagtt 38421340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 2488015 - 2487918
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttag 239  Q
    |||||| |||||||| ||  ||||| ||| ||||||||  ||||||||||||||||   ||||| | |||||||||||  ||||||||| ||||||||    
T  2488015 acatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatgcccttag 2487918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 14929221 - 14929160
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||| |||||| ||| ||| |||||||||||||||| ||| ||||||| |||||||||||||    
T  14929221 aagacaaaatagagtcaaactgttttcataagctatgttgcagagcttttggaaataagctg 14929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 27028838 - 27028879
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  27028838 tgttttcataagctatcttggagagcttatgaaaataagctg 27028879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 28769402 - 28769337
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||||||||||||||| ||| |||| ||||||||||||||||  |||| |||| |||||| |||||    
T  28769402 tgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 39881819 - 39881774
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  39881819 aaattgtttttataagctatcatggagagcttatggaaataagctg 39881774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 6950349 - 6950421
Alignment:
Q  106 aagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaaca 178  Q
    ||||||||||||||||||||||  |||| ||||  ||||||||||| |||| ||  ||||||||| |||||||    
T  6950349 aagagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaaca 6950421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 6966892 - 6966976
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||| ||| ||||||  ||||||||| |||||||| |  || ||||||  ||||||| |||||||| |||||||||||||    
T  6966892 tgttttcattagccatcttggggagcttatgaaaataagcggaaaatagcttaatgacatgttataagttgtttcaataagctct 6966976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 11415161 - 11415293
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| |  |||| || || |||||||||| ||| |||||| |||||||| ||||| || ||| |||| ||||   |||||   ||||    
T  11415161 tgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctctaaaacaatctcac 11415260  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    |||| ||||||||  || |||||| ||||||||    
T  11415261 aagtacttatgttagtaaataagcacaaataag 11415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 39561605 - 39561537
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||| ||||||||| |||| |||||||||||||||||||  ||||||| |  |||||||| ||||    
T  39561605 ttgttttcgtaagctatcatgaaaagcttatggaaataagctgaaaacagctaacagacatgtcgtaag 39561537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 43504758 - 43504810
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||| ||||||||||||| ||| |||||||||||||||||  |||||||||    
T  43504758 tgtttttataagctatcttggagaacttatggaaataagctgaaaacagctta 43504810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 9836917 - 9836882
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaat 121  Q
    |||||||||||||||||||| |||||||||||||||    
T  9836917 tgttttcataagctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 42215143 - 42215104
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctg 42215104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 43907904 - 43907869
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctat 101  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43907904 aagataaaataaagtcaaattgttttcataagctat 43907869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 8062336 - 8062394
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggaca 144  Q
    |||||||||||||||||||  |||| ||||||||||||||||  |||| |||| |||||    
T  8062336 tgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatggaca 8062394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 9541057 - 9540967
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaaca 178  Q
    ||||||||||||||| |  ||||||| || ||||||||||   |||  ||| |||||||||||||| || ||| ||||||||| |||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttccataagctctcccaaaca 9540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 31862500 - 31862574
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttc 160  Q
    |||||||||||| |||| |  |||||||||| ||||||||||  ||||||||| | | | |||||||||||||||    
T  31862500 tgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagttgcttc 31862574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 31875646 - 31875576
Alignment:
Q  98 ctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagct 168  Q
    ||||||| ||||||||||| ||||||| ||  ||  ||||| ||||||||||||||||| ||| |||||||    
T  31875646 ctatcttcaagagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagct 31875576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 116
Target Start/End: Complemental strand, 40014952 - 40014922
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatg 116  Q
    |||||||||||||||||||||||||||||||    
T  40014952 tgttttcataagctatcttgaagagcttatg 40014922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 6509366 - 6509273
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||||||||||||| || ||||||||| |||||||| ||  || || |||  | ||||||||||| || ||| |||||||||  |||||||    
T  6509366 tgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctctctcaaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 34849110 - 34849255
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat-aagttgcttcaataagctcttccaaacagcatca 184  Q
    |||| ||||||||| ||||| ||| ||||||||||| |||||  ||| ||||| | ||||||||| |||||| ||  || || ||| ||||||||  |||    
T  34849110 tgttatcataagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagttctcccaaacagtctca 34849209  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
     |||| ||||||    ||| |||||||||||||||| |||| ||||    
T  34849210 aaagtacttatgccagtagctaagctcaaataagctaatccgaaca 34849255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 42370424 - 42370359
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||| |||||||||||| ||||||| ||||||||||||||||  ||||| ||   |||||||||||    
T  42370424 tgttctcataagctatcatgaagagtttatggaaataagctgaaaacagtttgtagacatgtcata 42370359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 44236886 - 44236845
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||| ||| |||||||||| ||||||||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctg 44236845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 2107392 - 2107360
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatgga 118  Q
    |||||||||||||||||||| ||||||||||||    
T  2107392 tgttttcataagctatcttggagagcttatgga 2107360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 2235719 - 2235679
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||| |||||| |||||||||||||||| ||||    
T  2235719 tgttttcataaggtatcttaaagagcttatggaaatgagct 2235679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 2458630 - 2458562
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||| ||||||||||| |  ||||||||||||||||| |||  ||||||||| | ||||| ||||||    
T  2458630 ttgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataag 2458562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 18331817 - 18331869
Alignment:
Q  182 tcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcc 234  Q
    |||||||||||||||||  |||||||| |||||||||   |||||||||||||    
T  18331817 tcacaagtgcttatgttagtagataagatcaaataagtcaatccaaacaagcc 18331869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 26410286 - 26410398
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataa-gctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||| || || || || ||||||||||||||||| |||   ||||||||  ||||||||||| || || ||| ||||||||| |||| |||  |||    
T  26410286 tgttttcaaaaactgtcctggagagcttatggaaataaagctaaaaacagcttctggacatgtcatgagctgtttccataagctctcccaagcagtctca 26410385  T
Q  185 caagtgcttatgt 197  Q
     ||||||||||||    
T  26410386 gaagtgcttatgt 26410398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 27754412 - 27754452
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||| ||| |||||||||| ||||||||||    
T  27754412 gttttcataagctattttggagagcttatgaaaataagctg 27754452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 38874653 - 38874785
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag-ttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||| ||| ||| | |||| |||||||||   || |||||| |||| ||| ||| | ||| ||| |||||||||||  |||||  | |    
T  38874653 tgttttcataagctattttggagaacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtctta 38874752  T
Q  185 caagtgcttatgttgatagataagctcaaataa 217  Q
    | | |||||||| | ||||||||||||||||||    
T  38874753 ccaatgcttatgctaatagataagctcaaataa 38874785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 41620354 - 41620254
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||| |||||||||||||  |||||| || |||||||| |  |||| |||| ||||||||||||| ||| ||| |||| || | || |||||| ||||    
T  41620354 tgtttttataagctatcttgtcgagcttttgaaaataagcggaaaacaacttatggacatgtcataatttgtttccataaactttccctaacagcctcac 41620255  T
Q  186 a 186  Q
    |    
T  41620254 a 41620254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 43368707 - 43368631
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||||||| ||  ||||||| || ||| |||  |||||| ||||||||||  |||||||| |||||||||    
T  43368707 acatgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttagtagataagatcaaataag 43368631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 37273141 - 37273274
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||||||||||| ||| |||||||||||||| ||  |||| |||| ||||||||||||||||| ||| ||||||||| ||||||||  ||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcac 37273240  T
Q  186 aagtgcttatgttgatagataagctcaaataagc 219  Q
     |||||||||| | ||| ||||| ||||||||||    
T  37273241 cagtgcttatgctaataaataagttcaaataagc 37273274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 52323979 - 52323845
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagctta--tggaaataagctgggaacagcttagggacatgtcataagttgcttcaat 163  Q
    |||||||||||| || |||||||||| ||||||||||||| ||||||||  |||||||||| ||  ||||||||| |||| |||||||| ||  ||||||    
T  52323979 aagataaaataaggtcaaattgttttgataagctatcttggagagcttatgtggaaataagttgaaaacagcttatggacgtgtcataaattatttcaat 52323880  T
Q  164 aagctcttccaaacagcatcacaagtgcttatgtt 198  Q
    |||||||  |||||||  |  ||||||||||||||    
T  52323879 aagctctcacaaacagtcttgcaagtgcttatgtt 52323845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 43115062 - 43115213
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||| | ||||| |  |||||||||||||||||||||  ||||  ||| ||||||||||||||||| ||| |||| ||||||||||||   |||    
T  43115062 ttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaacaatctca 43115161  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaacaagccct 236  Q
    |||||| ||||||  |||||||| || | ||||||  ||| ||||| |||||    
T  43115162 caagtgattatgtcaatagataaccttatataagcaaatcaaaacaggccct 43115213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 16790503 - 16790375
Alignment:
Q  24 tttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    |||||||||| ||| ||||||| | || ||||| ||| |||  |||||||||||| | ||||| |||||||||||||||||| | |||||||| ||||||    
T  16790503 tttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcataagctatcttggatagcttatgaaaataa 16790404  T
Q  124 gctgggaacagcttagggacatgtcataag 153  Q
     |||  ||||||||| |||| |||||||||    
T  16790403 actgaaaacagcttatggac-tgtcataag 16790375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 31010409 - 31010540
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||| ||| ||||| |  ||||||||||||| |||||||  ||||||||| ||||||||||||||||| ||| ||||||| |  ||||||   ||||    
T  31010409 tgttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagctttcacaaacacactcac 31010508  T
Q  186 aagtgcttatgttgatagataagctcaaataa 217  Q
    |||| ||||||||  ||| |||| ||||||||    
T  31010509 aagttcttatgttagtagttaagttcaaataa 31010540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 36646446 - 36646296
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||||| |  |||| |||| |||||||| ||  ||||||||| ||||||| ||||||| | ||| ||||||||| ||||| ||  | |    
T  36646446 ttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaatagtctta 36646347  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    ||||||| ||||   ||||||| ||| |||||||   ||||||||||||||    
T  36646346 caagtgcctatgccaatagatatgcttaaataagtcgatccaaacaagccc 36646296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 48049046 - 48048962
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctc 169  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||  ||||||||| ||||||||||| ||||| ||  ||||||||    
T  48049046 ttgttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcatgagttggtttcataagctc 48048962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 31710950 - 31710819
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||| ||| |||||||  ||||||| ||||| |||||||  ||||||| | || |||||||||||||| ||  ||||||| |  |||||||  ||||    
T  31710950 tgttttcttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaacagactcac 31710851  T
Q  186 aagtgcttatgttgatagataagctcaaataa 217  Q
    |||| ||||||| | |||||||| ||||||||    
T  31710850 aagttcttatgtcggtagataagttcaaataa 31710819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 31711205 - 31711074
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||| ||| |||||||  ||||||| ||||| |||||||  ||||||| | || |||||||||||||| ||  ||||||| |  |||||||  ||||    
T  31711205 tgttttcttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaacagactcac 31711106  T
Q  186 aagtgcttatgttgatagataagctcaaataa 217  Q
    |||| ||||||| | |||||||| ||||||||    
T  31711105 aagttcttatgtcggtagataagttcaaataa 31711074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 36200042 - 36200173
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttc--ataagctatcttgaagagcttatggaaata 122  Q
    ||||||||| ||| ||||||| | || ||||||| | ||| | ||||||||||| | |  ||||||||  |||||||||| || |||||| |||||||||    
T  36200042 ttatcatataagttcttatgtatcagctatttatgtaacaaatgataaaataaactca--ttgttttcttataagctatcctgtagagctcatggaaata 36200139  T
Q  123 agctgggaacagcttagggacatgtcataagttg 156  Q
    |||||  |||| |||| |||||||||||||||||    
T  36200140 agctgaaaacaacttatggacatgtcataagttg 36200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 44284204 - 44284102
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataag 124  Q
    ||||||||| ||| || |||| | || ||||| ||| ||| || |||||| ||||| ||| ||||||||||||||||| || ||||||||| ||||||||    
T  44284204 ttatcatataagtactaatgtataagctatttctataacaaaaaataaaacaaagtcaaactgttttcataagctatcctggagagcttatagaaataag 44284105  T
Q  125 ctg 127  Q
    |||    
T  44284104 ctg 44284102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 5407440 - 5407363
Alignment:
Q  163 taagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttagt 240  Q
    |||||||| |||||||  |||||||||| |||| |  ||||||||||||||||||||| || |||||| |||||||||    
T  5407440 taagctctgccaaacaatatcacaagtgattatatcaatagataagctcaaataagctaatgcaaacaggcccttagt 5407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 20669179 - 20669244
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||||||||||||||||||| |||||||||| |||||||| |  ||||||||| | ||||||||||    
T  20669179 tgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 26542546 - 26542655
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    ||||||||||||||  || |||| ||||||||||||| ||  ||||  |||  ||||| |||||||||| |||| |||||||||||||||||  | ||||    
T  26542546 ttttcataagctattatggagagtttatggaaataagttgaaaacaagttatagacatatcataagttgtttcagtaagctcttccaaacagtcttacaa 26542645  T
Q  188 gtgcttatgt 197  Q
    || |||||||    
T  26542646 gtacttatgt 26542655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 27290964 - 27290863
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||| ||| ||||||| || |||| | ||||||||||||||  ||||||||| || ||||||||||| || ||  ||||||||||| ||||||| ||||    
T  27290964 tgtttgcattagctatcctgcagagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctcttcgaaacagcctcac 27290865  T
Q  186 aa 187  Q
    ||    
T  27290864 aa 27290863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 30573977 - 30573829
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||||||||||| |||||| ||| | ||||||||  ||||||||| | ||||| ||||| ||| ||  ||||| |||  ||||||   ||||    
T  30573977 tgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataagttctcacaaacaaactcac 30573878  T
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    ||||||||||||   ||||| ||||||||||||   ||||||||| ||||    
T  30573877 aagtgcttatgtcagtagat-agctcaaataagtccatccaaacaggccc 30573829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 37307997 - 37307941
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||||    
T  37307997 aagataaaataaagggaaactgttttca-aagctatcttgaagagcttatgaaaataa 37307941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 39971243 - 39971319
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctat 101  Q
    ||||||||| ||| ||||||| | ||||| |||||| ||| ||||||||||||||  |||||||||| |||||||||    
T  39971243 ttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgttttaataagctat 39971319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 21574499 - 21574590
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||| |||||||| | || ||||||||||||||||||||   | ||||||| | ||||||||||||||| ||  ||||||||| ||||||||    
T  21574499 tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacag 21574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 37825109 - 37825196
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||| || |||| |||||||||| || |||| || || ||||||||||||||||| |||  |||| |||| ||||||||||||||    
T  37825109 aagataatatcaagttaaattgtttttattagctttcctggagagcttatggaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 51929826 - 51929897
Alignment:
Q  164 aagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    ||||||||||||| ||| ||||||||| ||||| | |||||||||||||||||||   ||||||||| ||||    
T  51929826 aagctcttccaaatagcctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaacaggccc 51929897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 2719475 - 2719533
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggaca 144  Q
    |||||||||||||||||||| ||| |||||| |||||||||| ||||| |||| |||||    
T  2719475 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggaca 2719533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 33965552 - 33965518
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaa 120  Q
    |||||||||||||||||||||||||||||||||||    
T  33965552 tgttttcataagctatcttgaagagcttatggaaa 33965518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 36887510 - 36887580
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||||||||||||| |||||||||| |||||| ||||||||||  |||| |||| | |||||||| |||||    
T  36887510 ttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaagtt 36887580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 42745053 - 42745155
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    ||||||||||| || |||||||||||||||| ||  |||| |||| | ||||||||||||||| ||  ||||  ||||| ||| |  |||||||||||||    
T  42745053 taagctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgtcataagttgtttacataaattcttctaaataatatcacaagtgctt 42745152  T
Q  194 atg 196  Q
    |||    
T  42745153 atg 42745155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 11253511 - 11253640
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaag 188  Q
    |||||||||||||| |  |||||||| ||||||| ||||  ||||| |||  || ||||||||||||| ||  ||||  ||| ||||||||  || ||||    
T  11253511 tttcataagctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagtctctcaag 11253610  T
Q  189 tgcttatgttgatagataagctcaaataag 218  Q
    |||||||| |  ||||||| ||||||||||    
T  11253611 tgcttatgctagtagataatctcaaataag 11253640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 24624217 - 24624350
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||| |||||| |  | | ||||||  |||||||||  ||||| ||| |||||||||||||| || ||  ||||||||||||||||||  | ||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtcttac 24624316  T
Q  186 aagtgcttatgttgatagataagctcaaataagc 219  Q
    ||||||| ||||   |||||||| |||| |||||    
T  24624317 aagtgctaatgtgagtagataagttcaactaagc 24624350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 29771852 - 29771929
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||||  |||||||||||||||| ||  |||| |||| ||||||||| ||||||| |||  ||||||||    
T  29771852 ataagctatcttgagaagcttatggaaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctct 29771929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 50600241 - 50600148
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||||| |||||| ||| ||| |||||| ||||||||||  |||||||   ||||||||||| ||||| ||  ||||| ||||||||||||    
T  50600241 tgttttcatcagctatattggagaacttatgaaaataagctgaaaacagctcgtggacatgtcatgagttgtttttataagttcttccaaacag 50600148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 2923485 - 2923617
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||||||   ||||||| ||||  |||||||||   || | |||| ||||||||  ||||||| ||| ||||| ||||||||||||  |  |    
T  2923485 tgttttcataagctacactgaagagattatataaataagctaaaaataacttatggacatgtagtaagttgtttctataagttcttccaaacagtctttc 2923584  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    |||| |||||||  |||||||||||| ||||||    
T  2923585 aagtacttatgtcaatagataagctcgaataag 2923617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 12985425 - 12985369
Alignment:
Q  69 ataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagc 125  Q
    |||||||||||  ||| ||||||||||||||||| | |||| |||||||||||||||    
T  12985425 ataaaataaagataaactgttttcataagctatcctcaagaacttatggaaataagc 12985369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 20192648 - 20192548
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagata 206  Q
    ||||||||||||||| || ||  ||||||||| |||||||||||||| || ||| |||||||||  || ||||  | | ||||||||||||  |||||||    
T  20192648 agagcttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagctctctcatacagtgtaagaagtgcttatgtcaatagata 20192549  T
Q  207 a 207  Q
    |    
T  20192548 a 20192548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 21367673 - 21367725
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctt 137  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||  ||||||||    
T  21367673 ttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 40665436 - 40665500
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 150  Q
    |||||||||||| ||||||| |||||||||  ||||||||||  ||||||||| | |||||||||    
T  40665436 tgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 214
Target Start/End: Complemental strand, 41644508 - 41644380
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| |  ||| |||| ||||||||||||  ||||||||| | | |||||  |||||| ||  ||||| ||| | ||||||  || |    
T  41644508 tgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgtcccaagttgtttttataagttctcctaaacagtgtctc 41644409  T
Q  186 aagtgcttatgttgatagataagctcaaa 214  Q
    ||||||||||| |  ||||||||||||||    
T  41644408 aagtgcttatgctagtagataagctcaaa 41644380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 47904125 - 47904085
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  47904125 gttttcataagctatcgtgaagagcttacggaaataagctg 47904085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 48528502 - 48528646
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataag 124  Q
    ||||||||| ||| ||||||| | || ||||| ||| |||  | ||||||||||   ||  ||||||||||||||||  || |||| |||| ||||||||    
T  48528502 ttatcatataagtacttatgtataagctatttctataacaagaaataaaataaaaccaagctgttttcataagctattctggagagtttatagaaataag 48528601  T
Q  125 ctgggaacagcttagggacatgtcataagttgcttcaataagctc 169  Q
    |||  ||| | ||| ||||||| ||||||||||||| | ||||||    
T  48528602 ctgaaaactgtttatggacatgccataagttgcttccacaagctc 48528646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 11039379 - 11039296
Alignment:
Q  109 agcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgct 192  Q
    |||||||||| ||||||||  |||| |||| |||||||||||||  || ||| |||||||||| |||||||  |||||| ||||    
T  11039379 agcttatggagataagctgaaaacaacttatggacatgtcataatatgtttccataagctctttcaaacagtctcacaattgct 11039296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 16609966 - 16609891
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttc 160  Q
    ||||||||||||||||| |||||||| | |||||||||||     ||| ||||| |||||||||||| ||||||||    
T  16609966 ttgttttcataagctattttgaagaggtgatggaaataagacaaaaacggcttatggacatgtcatacgttgcttc 16609891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 22049287 - 22049362
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttc 160  Q
    ||||||||||||||||| |||||||| | |||||||||||     ||| ||||| |||||||||||| ||||||||    
T  22049287 ttgttttcataagctattttgaagaggtgatggaaataagacaaaaacggcttatggacatgtcatacgttgcttc 22049362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 22667413 - 22667543
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||||||||||| |||||||| |||||||||||   || | |||   || |||| ||| | || ||| |||| ||||  |||||||  ||||||    
T  22667413 ttttcataagctatcttggagagcttacggaaataagctaaaaataactt-ctgaaatgttatatgctgtttccataaactctctcaaacagtctcacaa 22667511  T
Q  188 gtgcttatgttgatagataagctcaaataagc 219  Q
    ||||||||||   |||||||||||||||||||    
T  22667512 gtgcttatgtcagtagataagctcaaataagc 22667543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 22724052 - 22724182
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||||||||||| |||||||| |||||||||||   || | |||   || |||| ||| | || ||| |||| ||||  |||||||  ||||||    
T  22724052 ttttcataagctatcttggagagcttacggaaataagctaaaaataactt-ctgaaatgttatatgctgtttccataaactctctcaaacagtctcacaa 22724150  T
Q  188 gtgcttatgttgatagataagctcaaataagc 219  Q
    ||||||||||   |||||||||||||||||||    
T  22724151 gtgcttatgtcagtagataagctcaaataagc 22724182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 36139897 - 36139952
Alignment:
Q  98 ctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||||||| ||||||||||  ||||||||  | ||||||||||||    
T  36139897 ctatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataag 36139952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 49587035 - 49586933
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttc--ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtca 149  Q
    ||||| ||| ||| ||||||||||||||| ||| |||||||  ||||||||||||| |||| |||  ||||||| |||  |||| |||| ||| ||||||    
T  49587035 tatttctataacaaaagataaaataaagtcaaactgttttcatataagctatcttggagagattaaagaaataaactgaaaacaacttatggatatgtca 49586936  T
Q  150 taa 152  Q
    |||    
T  49586935 taa 49586933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 482852 - 482814
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  482852 tttcataaactatcttgaagagtttatggaaataagctg 482814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 1217863 - 1217773
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||||||||||||| |  ||| |||||| || |||| ||  |||| |||| |||||||||||||| || |||  ||||||||||||||    
T  1217863 tgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaa 1217773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 2825156 - 2825194
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  2825156 ttttcataagctatcttggagagcttatgaaaataagct 2825194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 10101598 - 10101552
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    |||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  10101598 agttatttctataacaaaagataaaataaagttaaattgttttcata 10101552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 10212523 - 10212477
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    |||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  10212523 agttatttctataacaaaagataaaataaagttaaattgttttcata 10212477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 13371127 - 13371165
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  13371127 tttcataagctattatgaagagcttatggaaataagctg 13371165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 13413920 - 13413978
Alignment:
Q  69 ataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||| | ||  |||||||||||||||||||||| |||||||  ||||||||||    
T  13413920 ataaaataaatttaagctgttttcataagctatcttgaacagcttatcaaaataagctg 13413978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 191
Target Start/End: Complemental strand, 14548785 - 14548679
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||| |||  || |||||||||||||||||||||  |||||| ||   | |||||||| |||| ||  |||||||||  |||||||  |||    
T  14548785 ttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctctctcaaacagtctca 14548686  T
Q  185 caagtgc 191  Q
    |||||||    
T  14548685 caagtgc 14548679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 21872280 - 21872214
Alignment:
Q  164 aagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||||| ||||||||||  ||||||||||||||||   |||||||| ||||||||| | |||||||||    
T  21872280 aagcttttccaaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaaca 21872214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 22031199 - 22031241
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||||||||||||| |||||||| | |||||||||||    
T  22031199 aaattgttttcataagctattttgaagagatgatggaaataag 22031241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 24158566 - 24158528
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataag 124  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  24158566 tgttttcataagctatcctggagagcttatggaaataag 24158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 24887346 - 24887281
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    ||||||||||||||||| || ||||||||||| |||||||||  ||||| |||  ||||||||||||    
T  24887346 tgttttcataagctatcctggagagcttatgggaataagctgaaaacag-ttaatgacatgtcataa 24887281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 39602273 - 39602172
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg-cttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||||||  ||| |||||| ||||||| ||  ||||  ||| | |||||||||||| || |||| ||||||||||||||| ||| |||    
T  39602273 tgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttc-ataagctcttccaaatagcctca 39602175  T
Q  185 caa 187  Q
    |||    
T  39602174 caa 39602172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 40122901 - 40122827
Alignment:
Q  22 cgtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataa 96  Q
    |||||||| ||||||| ||||||| | || |||||  || ||| ||||||||||||||| ||| |||||||||||    
T  40122901 cgtttatcgtatcagtacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcataa 40122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 45433006 - 45432936
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||||||| |||  ||| || |||||||||||||||||||||  |||| |||| | |||||||||||    
T  45433006 aaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 52619010 - 52619076
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||| ||||||||||||||||||| || ||||||| ||  || |||||| | |||||||||||    
T  52619010 tgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataa 52619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 237403 - 237464
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatg 146  Q
    ||||||||||||| |||| |  |||||||| ||||||||||||  ||||||||| |||||||    
T  237403 ttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacatg 237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 2100195 - 2100110
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||| |||||||||||| ||  || |||||||||  |||||||  ||||||||| ||  | ||| |||||||||||||||||    
T  2100195 agcttaggaacatgtcataagctgtctccataagctctcacaaacagtctcacaagtgttttagctgaaagataagctcaaataag 2100110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 8933793 - 8933834
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||| ||||||| |||||||||| |||||||||    
T  8933793 ttgttttcataagttatcttggagagcttatgaaaataagct 8933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 9279390 - 9279337
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||  |||||||||    
T  9279390 ttgttttcataaactatcatgaagagtttaaggaaataagctgaaaacagctta 9279337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 20502131 - 20502090
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  20502131 tgttttcataagctatcctgaagagcttatgagaataagctg 20502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 25776123 - 25776176
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    ||||||||||||| | ||||||||| ||||||||| |||||||  |||||||||    
T  25776123 ttgttttcataagttgtcttgaagaacttatggaagtaagctgaaaacagctta 25776176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 43948661 - 43948714
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    ||||||||||||||||||||| | |||||  ||||||||||||  |||||||||    
T  43948661 ttgttttcataagctatcttggaaagcttgaggaaataagctgaaaacagctta 43948714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 50004682 - 50004739
Alignment:
Q  109 agcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    ||||||| |||||||||||  ||||||||| | ||||||||||||||| ||| |||||    
T  50004682 agcttattgaaataagctgaaaacagcttaagaacatgtcataagttgtttccataag 50004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 51510257 - 51510216
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||| |||| || ||||||||||||||||||||    
T  51510257 ttgttttcataagttatcgtggagagcttatggaaataagct 51510216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 2071063 - 2071103
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  2071063 tgttttcataagctatgatgaagagcttatgaaaataagct 2071103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 20170771 - 20170731
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||| |||||||||||| |||||||||| |||||||||    
T  20170771 tgttttcctaagctatcttgtagagcttatgcaaataagct 20170731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 21862233 - 21862177
Alignment:
Q  91 tcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgt 147  Q
    |||| |||||||| | |||||||||||||||||||||  |||| |||| ||||||||    
T  21862233 tcattagctatctgggagagcttatggaaataagctgaaaacaacttatggacatgt 21862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 22214723 - 22214659
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtca 149  Q
    |||||||||||||||||| |  |||  ||| ||||||||||||  ||||||||| ||||||||||    
T  22214723 ttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtca 22214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 23315588 - 23315620
Alignment:
Q  63 cataagataaaataaagtgaaattgttttcata 95  Q
    |||||||||||||||||| ||||||||||||||    
T  23315588 cataagataaaataaagtcaaattgttttcata 23315620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 23793588 - 23793632
Alignment:
Q  83 aattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||| ||||||||||||||||| | ||||||| |||||||||||    
T  23793588 aattggtttcataagctatcttggaaagcttatagaaataagctg 23793632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 24603815 - 24603683
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||| |||||| ||||||| ||  ||||||||||||   ||  ||||||||| || ||||||||||  || ||||||||| ||| ||||||||  |||     
T  24603815 tgtttccataagttatcttggaggacttatggaaatatcttgaaaacagcttatgggcatgtcataaactgtttcaataagttctcccaaacagtctcag 24603716  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    | ||||||||| |  |||| || ||||||||||    
T  24603715 aggtgcttatgctagtagaaaacctcaaataag 24603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 30923961 - 30923830
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||| ||||| |  |||| |||| |||||||||||  |||||||||  ||||||||||||| || ||| || ||||||   ||||||  ||||    
T  30923961 tgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccat-agctctcataaacagtctcac 30923863  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    ||||| |||| |  ||| |||||||||| ||||    
T  30923862 aagtgtttatatcaataaataagctcaagtaag 30923830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 33725937 - 33725837
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||| |||| ||||| || | ||||||| |||||||| ||  |||||| ||   ||||||||||||||||||| ||||||| | | ||||| ||||||    
T  33725937 tgtttttataaactatcctggaaagcttatagaaataagatgaaaacagcatatcaacatgtcataagttgcttctataagctttcctaaacaacatcac 33725838  T
Q  186 a 186  Q
    |    
T  33725837 a 33725837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 35394561 - 35394509
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    ||||||||||||||||||||||||  ||||| ||||||| ||  |||||||||    
T  35394561 tgttttcataagctatcttgaagaatttatgaaaataagttgaaaacagctta 35394509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 41164997 - 41164909
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    |||||||||||  || || |||||| | |||||||||   |||||||| ||||||  | |||||||| ||||||||||| |||||||||    
T  41164997 acatgtcataaactgttttaataagtttttccaaacattgtcacaagttcttatgccggtagataagttcaaataagctaatccaaaca 41164909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 41452530 - 41452610
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    ||||||||||||||||| || |||  || |||||||||| ||  |||||||||  ||||| |||||||||| ||| |||||    
T  41452530 tgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagttgtttctataag 41452610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 44488892 - 44488956
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||||||||||||  ||| |||||||||||||||||  ||| ||| | || ||||||||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaaccgctcatgggcatgtcataa 44488956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 46407977 - 46407917
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||| |||||| ||| ||||||||||||||||  ||| |||||| || |||||||||    
T  46407977 aagataaagtaaagttaaactgttttcataagctattgtgatgagcttgtgaaaataagct 46407917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 50952347 - 50952407
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||| |||||||| ||||||||||||||||||||   ||||| ||| | ||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataag 50952407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 11457086 - 11457237
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    |||||| |||||||| |||||||||||| ||| ||||||| ||||||||| |||||||  ||  ||||||||| ||||||||||||||||| ||| ||||    
T  11457086 aagatataataaagtcaaattgttttcaaaagttatcttggagagcttatagaaataatatga-aacagcttatggacatgtcataagttgtttccataa 11457184  T
Q  166 gctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||| ||||||  ||||||||| || ||   |||||||||||||||||||    
T  11457185 gctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataag 11457237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 32172660 - 32172791
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| |||||| || ||||||||||||||  ||  ||||| ||||||||||||||||| ||| ||||||||| ||||||    ||||    
T  32172660 tgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaactatctcac 32172759  T
Q  186 aagtgcttatgttgatagataagctcaaataa 217  Q
    ||||||||||| |  || ||||||||||||||    
T  32172760 aagtgcttatgctagtatataagctcaaataa 32172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 12521542 - 12521668
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgct 192  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||| | |||| |||||||  ||||| | ||||||||||||||||  ||| || || |    
T  12521542 ataagctattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcataagcagcttctacaagctcttccaaacagtctcaaaattgat 12521641  T
Q  193 tatgttgatagataagctcaaataagc 219  Q
    ||||| |||||||||||| || |||||    
T  12521642 tatgtcgatagataagctgaagtaagc 12521668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 170
Target Start/End: Complemental strand, 12242807 - 12242689
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    ||||| ||| ||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |||||||  |||| || | |  |||||||||    
T  12242807 tatttgtataacaaaagataaaatagagtcaaattgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcata 12242708  T
Q  152 agttgcttcaataagctct 170  Q
    ||||  ||| |||||||||    
T  12242707 agttttttccataagctct 12242689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 36774789 - 36774677
Alignment:
Q  67 agataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    |||||||| ||||| ||| |||||| |||||||||| || |||||||||||||||||||||  | || |||  ||||||||||||||  | ||| |||||    
T  36774789 agataaaacaaagtcaaactgtttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataagccgtttccataag 36774690  T
Q  167 ctcttccaaacag 179  Q
    |||||||||||||    
T  36774689 ctcttccaaacag 36774677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 37611282 - 37611194
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||| | |||||||| |||||| ||  |||||||||    
T  37611282 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctct 37611194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 37788012 - 37787924
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||| | |||||||| |||||| ||  |||||||||    
T  37788012 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctct 37787924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 219
Target Start/End: Complemental strand, 17258946 - 17258813
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||  ||||||||| | |||||||||||| |  ||  ||| | ||| ||||| |   ||||    
T  17258946 tgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaatgtcac 17258847  T
Q  186 aagtgcttatgttgatagataagctcaaataagc 219  Q
    |||||||||||||  | |||||||||||||||||    
T  17258846 aagtgcttatgttagttgataagctcaaataagc 17258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 213
Target Start/End: Original strand, 17259209 - 17259351
Alignment:
Q  71 aaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||||| |||||||| | | ||||||||||  |||| |||||||||||||||  |||||||| | || ||||||| |||||| ||| | ||||||     
T  17259209 aaaataaagtcaaattgttctaaaaagctatcttagagagtttatggaaataagcttagaacagctcatggtcatgtcaaaagttgtttccaaaagctca 17259308  T
Q  171 tccaaacagcatcacaagtgcttatgttgatagataagctcaa 213  Q
      |||  ||  |||||||||||||||||  |||||||||||||    
T  17259309 ctcaacaagtctcacaagtgcttatgttagtagataagctcaa 17259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 10272495 - 10272370
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||| |||||| |||| ||||| ||||||||||  |||| ||||  |||||||||||||||| ||| |||||| || ||||| ||   ||    
T  10272495 ttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgtttctataagcactcccaaatagtcaca 10272396  T
Q  185 caagtgcttatgttgatagataagct 210  Q
    |||||| |||||| |  |||||||||    
T  10272395 caagtgattatgtcggcagataagct 10272370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 15074813 - 15074732
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    ||||||||||||| |||  || | |||||||||||||||||||  ||||||||| ||||||||| || ||||||||||||||    
T  15074813 ttgttttcataagttatactggaaagcttatggaaataagctgaaaacagcttatggacatgtcgtacgttgcttcaataag 15074732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 985598 - 985689
Alignment:
Q  66 aagataaaataaagtgaaattgttttca--taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    ||||||||||||||| ||| ||||||||  ||||||||| |||||||  |||||||||||||||  ||| ||||  ||||||||||||||||    
T  985598 aagataaaataaagtcaaactgttttcacataagctatcatgaagagactatggaaataagctgaaaaccgcttgtggacatgtcataagtt 985689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 17368682 - 17368753
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  ||| || || | |||||||||||||||    
T  17368682 ttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttg 17368753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 7674655 - 7674796
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||||||||||| |||  || || ||||||||||  |||| ||||   ||||||||||||||| ||| ||||| |||||||| |||  ||||    
T  7674655 tgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttccataagttcttccaagcagtctcac 7674754  T
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaa 228  Q
    ||   |||| || | |||||||||||||||||||  |||||||    
T  7674755 aa-aacttaagtaggtagataagctcaaataagccaatccaaa 7674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 8089957 - 8090075
Alignment:
Q  100 atcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttg 199  Q
    ||||||||||||||||| ||||||||||  ||||||||||| | || |||||||||| ||  |||||||||  |||| ||  || | ||||||| ||||     
T  8089957 atcttgaagagcttatgaaaataagctgaaaacagcttaggaatatatcataagttgttttcataagctctctcaaatagtctcgcgagtgcttgtgtta 8090056  T
Q  200 atagataagctcaaataag 218  Q
     |||||||| |||||||||    
T  8090057 gtagataagttcaaataag 8090075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 10280695 - 10280551
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    ||||| ||| ||| |||||| |||||||| ||| ||||| | |||| |||||   ||| |||||||||||||||||  |||| |||| |||||| |||||    
T  10280695 tatttctataacaaaagatagaataaagtcaaactgtttgcttaagttatctcagagaacttatggaaataagctgataacaacttatggacat-tcata 10280597  T
Q  152 agttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    || || ||| ||||| |||| ||||||||   ||||||||||||||    
T  10280596 agctgtttccataagttctttcaaacagccgaacaagtgcttatgt 10280551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 28586808 - 28586719
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatg 196  Q
    ||||||||| |||||||||||  ||||||||| ||| |||||||||| |  ||| ||||||||| ||||||||  |||||| ||||||||    
T  28586808 agagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcacaaatgcttatg 28586719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 32408653 - 32408588
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||| |||||||||||||||||||||| |  | || |||| ||||||||||||||    
T  32408653 ttttcataagctatcctgaagagcttatggaaataagcagaaaccaacttacggacatgtcataag 32408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 35095849 - 35095756
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||||| |||||||||| | |||||||||||||||| ||  ||| || || | |||||||||||| |  ||| ||||||||||||||||||    
T  35095849 tgttttcatgagctatcttgtaaagcttatggaaataagttgaaaacggcatatgtacatgtcataagatatttccataagctcttccaaacag 35095756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 9202811 - 9202759
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||| ||||||||||| |||||| ||||||||||| |||||||||    
T  9202811 tgttttcataagttatcttgaagaacttatgaaaataagctggaaacagctta 9202759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 13604912 - 13604828
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||||||| |||||||||||||||||| ||||||| ||  |||| | || |||||||||||||| || ||  |||||||||    
T  13604912 tgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctct 13604828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 26005060 - 26004928
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||| |||| |||||||||||||||||| ||  ||||  | ||| ||||| |||||| || |||  |||| | |||||| |||  | ||    
T  26005060 tgttttcataagctagcttggagagcttatggaaataaggtgaaaacaattaaggaacatgccataagctgtttctgtaagtttttccaagcagtttgac 26004961  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||| |  |||||||||| |||||||    
T  26004960 aagtgcttatgctagtagataagctaaaataag 26004928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 29117051 - 29116972
Alignment:
Q  50 gttatttatatgacataagataaaataaagtgaaattgttttc--ataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||| ||| ||| ||||||||||||||| ||| |||||||  |||||||||| |||| |||||||| ||||||||||    
T  29117051 gttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctatcctgaaaagcttatgcaaataagctg 29116972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 40205138 - 40205070
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||| || ||||||||| |||||||||||  ||||| ||| |||||||| |||||    
T  40205138 ttgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataag 40205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 41052855 - 41052967
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    ||||| ||||||| | ||| ||||||||||| |||| ||| |||||||||||||||||| |   || || ||| | |||||||||| |||| ||| ||||    
T  41052855 aagatcaaataaacttaaactgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcataggttgtttctataa 41052954  T
Q  166 gctcttccaaaca 178  Q
    ||||| |||||||    
T  41052955 gctctcccaaaca 41052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 4619718 - 4619825
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||||||||| || ||| |||||||||||||| ||  | ||||||| | ||||||||| ||||| ||  ||||||||| ||||||||  |  |||||    
T  4619718 ttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagtgttgcaagt 4619817  T
Q  190 gcttatgt 197  Q
    ||||||||    
T  4619818 gcttatgt 4619825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 5284512 - 5284445
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    ||||||||||| |||||| ||||||||| ||| ||||||||||  || |||||| |||||||||||||    
T  5284512 ttgttttcataggctatcatgaagagctaatgaaaataagctgaaaaaagcttatggacatgtcataa 5284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 21768260 - 21768193
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||| |||||||||||||||| | ||||||| ||  |||||| || ||||||||||||||    
T  21768260 tgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataag 21768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 36639529 - 36639596
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||||||||||||||||||| |||||||  |  |||| |||| ||||| ||||||||    
T  36639529 tgttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatggacacgtcataag 36639596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 2092608 - 2092518
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||||| | ||||||||||| | ||||| ||| ||| ||  |||| |||| ||||||| ||||||||| ||||||||||||| |||||    
T  2092608 tgttttcattaactatcttgaagggtttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttcaataagctctcccaaa 2092518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 7319071 - 7319013
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggaca 144  Q
    |||||||||||||||||||| ||| |||||| |||||||||| ||||| |||| |||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggaca 7319013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 18906349 - 18906407
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggaca 144  Q
    |||||||||||||||||||||| ||||||| |||||||||||  |||| |||| |||||    
T  18906349 tgttttcataagctatcttgaaaagcttatcgaaataagctgaaaacaacttatggaca 18906407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 40534205 - 40534339
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||||||    ||||||||||||| |||| ||  |||   ||| | |||||||||||| | |||| ||||||||| | |||||| ||||    
T  40534205 ttgttttcataagctatcccagagagcttatggaagtaagatgaaaactaattatgaacatgtcataagctacttccataagctctcctaaacagtatca 40534304  T
Q  185 caagtgcttatgttgatagataagctcaaataagc 219  Q
    |||||| ||||||   || |||| |||||||||||    
T  40534305 caagtgtttatgtcagtaaataaactcaaataagc 40534339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 41957514 - 41957424
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||||||||||||| |  ||| |||||| ||||||| ||  |||| |||| |||||||||||||| || |||  ||||||||||||||    
T  41957514 tgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaa 41957424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 8177584 - 8177451
Alignment:
Q  97 gctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatg 196  Q
    |||||| || |||||||||| |||||| |||  |||| |||| |||||| ||||||| || ||| || ||||||||| ||| |  |  ||||||||||||    
T  8177584 gctatcctggagagcttatgaaaataacctgaaaacaacttatggacatatcataagctgtttccatgagctcttccgaacggtctatcaagtgcttatg 8177485  T
Q  197 ttgatagataagctcaaataagcttatccaaaca 230  Q
      || ||||||| ||||||||||  |||||||||    
T  8177484 ccgaaagataagttcaaataagccaatccaaaca 8177451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 17756877 - 17756808
Alignment:
Q  23 gtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttc 92  Q
    ||||||||||| ||| ||||||| |||||| ||| | | ||| ||||||||||||||| |||||||||||    
T  17756877 gtttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 38047895 - 38047790
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaag 232  Q
    |||||| ||||||||||||||||| ||| ||||||||| ||||||||   ||||||| |||||  |  |||||||| |||| |||||  ||| ||||| |    
T  38047895 agcttatggacatgtcataagttgtttccataagctctcccaaacagtcacacaagtacttataatagtagataagttcaagtaagccaatctaaacatg 38047796  T
Q  233 ccctta 238  Q
    ||||||    
T  38047795 ccctta 38047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 443942 - 443994
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||||||||||| || |||| |||| ||||||||| |||||||||    
T  443942 tgttttcataagctatcttggagtgcttttggagataagctggaaacagctta 443994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 2468440 - 2468504
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||| |||||||||| ||||||| |||||||| ||||||   ||||||||| |||||||||||||    
T  2468440 tttttataagctatcctgaagagtttatggaagtaagctcaaaacagcttatggacatgtcataa 2468504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 4014487 - 4014435
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||||||||||| ||| |||||| ||||||||||  |||||||||    
T  4014487 tgttttcataagctatcttggagaacttatgaaaataagctgaaaacagctta 4014435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 18543260 - 18543193
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||| || ||||||||| |||||||||||  |||| || | ||||||||||||||    
T  18543260 ttgttttcataagctatcctggagagcttat-gaaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 4855704 - 4855834
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||| |||||   |||||||||  ||||||||| |  ||||||||  | |||||||||||||||||   |||||||||  |||||||  |||    
T  4855704 ttgttttcataaactatcccaaagagcttacagaaataagccgaaaacagcttctgaacatgtcataagttgct---ataagctctctcaaacagtctca 4855800  T
Q  185 caagtgcttatgttgatagataagctcaaataag 218  Q
    |||||| ||| ||   || |||||||||||||||    
T  4855801 caagtgtttaagtcattatataagctcaaataag 4855834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 10907414 - 10907489
Alignment:
Q  115 tggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtg 190  Q
    ||||||||||| |  |||||||||  |||||| ||||||||| ||  ||||||||||||||||||  |||||||||    
T  10907414 tggaaataagccgaaaacagcttattgacatgacataagttgttttcataagctcttccaaacagtctcacaagtg 10907489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 34975367 - 34975498
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagca 181  Q
    ||||||||||| ||||||||| || |||||| ||||||||||||||  |||   ||| ||| ||||||||   || ||  || ||||||| |||||||      
T  34975367 aaattgttttcgtaagctatcctggagagctaatggaaataagctgaaaacgatttatggatatgtcatactatgtttggatgagctctttcaaacagtc 34975466  T
Q  182 tcacaagtgcttatgttgatagataagctcaa 213  Q
    ||| ||||| |||||||  |||||||||||||    
T  34975467 tcataagtgattatgttagtagataagctcaa 34975498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 236
Target Start/End: Original strand, 35960423 - 35960569
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaag 188  Q
    |||||||||||||| || | ||| ||  ||||||||||   |||| |||| ||||||||| ||||||||||| |||||||||  |||| ||  | || |     
T  35960423 tttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttatggacatgtcgtaagttgcttccataagctctctcaaatagtctgac-at 35960521  T
Q  189 tgcttatgttgatagataagctcaaataagcttatccaaacaagccct 236  Q
    ||||||||   || |||||||||||||||| | | |||||||||||||    
T  35960522 tgcttatgccaattgataagctcaaataagttaacccaaacaagccct 35960569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 11707062 - 11707128
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||||||||||||||| ||||||| || ||||||||||  |||| ||||   |||||||||||    
T  11707062 tgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 30217092 - 30217197
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaag 188  Q
    |||||||||||||| || ||||||||||||||||| |    |||| |||| ||||||| |||||| |  ||| ||||||||| | ||||||  |||||||    
T  30217092 tttcataagctatcctggagagcttatggaaataaacctaaaacaacttatggacatg-cataagataattccataagctctcctaaacagtctcacaag 30217190  T
Q  189 tgcttat 195  Q
    |||||||    
T  30217191 tgcttat 30217197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 33533602 - 33533564
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  33533602 tgttttcacaagctatcttggagagcttatggaaataag 33533564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 38104917 - 38104879
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctg 38104879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 5952032 - 5951947
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||  |||  |||| |||||||||||||||||||  |||| ||||  | | | |||||||||||||| |||||||||    
T  5952032 ttgttttcataaattatactgaatagcttatggaaataagctgaaaacaacttatagccctatcataagttgcttccataagctct 5951947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 18704100 - 18704016
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||||||||||||    |||| |||||||||||||||||  |||| ||||  ||||||| |||||||| ||| |||||||||    
T  18704100 ttgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttatagacatgttataagttgtttc-ataagctct 18704016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 29588886 - 29588927
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||| |||||||| |||||||| ||||||||||||||||    
T  29588886 tgttttcgtaagctatgttgaagagtttatggaaataagctg 29588927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 32849244 - 32849317
Alignment:
Q  145 tgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||||  ||  ||||| ||| ||||||||| ||||||||||||||| |  |||||||||| |||||||    
T  32849244 tgtcataagtttttttcataagttctcccaaacagcctcacaagtgcttatgatagtagataagcttaaataag 32849317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 34690879 - 34690964
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||| |||||||| |||||| ||||||||||||||||||  |  |||| |||| |||||||||| || ||| ||  |||||||||    
T  34690879 ttgttctcataagccatcttggagagcttatggaaataagtcgataacaacttatggacatgtcacaatttgtttttataagctct 34690964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 36318780 - 36318833
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    ||||||||||||||||||||| |||  ||||| ||||||||||  |||||||||    
T  36318780 ttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagctta 36318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 36638754 - 36638819
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||||||||||| |||| |  |||||||||||||||||||||  || |||||| | ||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 37588424 - 37588371
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    ||||||||||||| |||  || |||||||||||||||||||||  |||||||||    
T  37588424 ttgttttcataagttattctggagagcttatggaaataagctgaaaacagctta 37588371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 38829695 - 38829617
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||||||||||||||||| ||||| || |  ||||||||  ||| |||| |||||| | ||| |||||||||    
T  38829695 ttcataagctatcttgaagagcttatgaaaatatgccgaaaacagctt--ggatatgtgataagtcgtttccataagctct 38829617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 1084184 - 1084144
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  1084184 tgttttcataacatatcatgaagagcttatggaaataagct 1084144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 5377162 - 5377114
Alignment:
Q  184 acaagtgcttatgttgatagataagctcaaataagcttatccaaacaag 232  Q
    ||||||||||||||  ||||||||||||||||||||  |||| ||||||    
T  5377162 acaagtgcttatgtcaatagataagctcaaataagccaatccgaacaag 5377114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 11615508 - 11615560
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||| |||| | | ||||||||||||||||||||  |||||||||    
T  11615508 tgttttcataagatatccttatgagcttatggaaataagctgaaaacagctta 11615560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 11700420 - 11700332
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttat 195  Q
    |||| ||||| |||||| |||  ||||||||| ||||||||||||||||| ||| |||| |||| |  || ||  ||||||||||||||    
T  11700420 agagtttatgaaaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctcctcaatagtctcacaagtgcttat 11700332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 18897796 - 18897744
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcataagctat 101  Q
    |||||||| || |||| |||||||||| |||| ||||||||||| ||||||||    
T  18897796 agttatttctaagacagaagataaaattaagtcaaattgttttcgtaagctat 18897744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 18902806 - 18902854
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||| |||  ||||||||||||||||||||  |||||||||    
T  18902806 ttcataagctattttggggagcttatggaaataagctgcaaacagctta 18902854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 26383372 - 26383436
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 150  Q
    ||||| |||||||||||||| ||||||| |  |||||||||| ||  |||||| |||||||||||    
T  26383372 tgtttacataagctatcttgtagagcttgtaaaaataagctgagatgagcttatggacatgtcat 26383436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 28413343 - 28413295
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||| ||||||| |||| ||||||||||||||||  |||||||||    
T  28413343 ttcataagttatcttggagagtttatggaaataagctgaaaacagctta 28413295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 38034090 - 38033958
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||| ||||||| ||||  || | |||||||| || |||| ||||   ||||| |||||| || || |||||  ||||||||||||  ||||    
T  38034090 tgttttcataagttatcttggagagtataagaaaataagccggaaacaacttacaaacatgccataagctgttttaataacttcttccaaacagtctcac 38033991  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    | |||||||||    |||| |||||||||||||    
T  38033990 aggtgcttatgccagtagaaaagctcaaataag 38033958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 39105471 - 39105511
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||||||||||| ||| |||||| |||||||||    
T  39105471 tgttttcataagctatcttggagaacttatgaaaataagct 39105511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 40097551 - 40097483
Alignment:
Q  23 gtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgtttt 91  Q
    ||||||||||| ||| | ||||| | |||||||| ||| ||| ||||||||||| ||| ||||||||||    
T  40097551 gtttatcatataagtgcgtatgtataagttatttctataacagaagataaaatagagttaaattgtttt 40097483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 32821816 - 32821948
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| | |||||||||| ||||||| |||  ||||||||| ||||||||||||||||| ||| |||| |||||||||||||  |  |    
T  32821816 tgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaacagtcttgc 32821915  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    || |||||| |||| ||||||||||||||||||    
T  32821916 aaatgcttacgttggtagataagctcaaataag 32821948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 34652097 - 34652017
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagct 168  Q
    |||||||||||||||||| |||||||||||||||||| ||  ||||||||| ||||||||||||||||| ||| |||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 35485923 - 35486052
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||| |||||||||| |||||||| ||||||||| |||||  ||||||||| | |||| ||||||||||||| | |||| |||  |||||||  |||    
T  35485923 ttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagttgctttagtaagttctctcaaacagtctca 35486022  T
Q  185 caagtgcttatgttgatagataagctcaaa 214  Q
    ||||| ||||||| | |||||||| |||||    
T  35486023 caagttcttatgtcggtagataagttcaaa 35486052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 15120186 - 15120322
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagca 181  Q
    ||||||||||| ||||||||| || |||||||||  |||||||||   ||||||| | | ||||||||||||||| ||| ||||||||| ||||||||      
T  15120186 aaattgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacagat 15120285  T
Q  182 tcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||| || ||||| |  |||||||| |||||||||    
T  15120286 tcacaactgtttatgctagtagataagttcaaataag 15120322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 10563622 - 10563472
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||||  ||||||||||| | ||||||||||  || |||||| |||||||||||| | || |||   ||||||| ||||| | | |||    
T  10563622 ttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcataggctgtttc--caagctctcccaaataacttca 10563525  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaacaagccctt 237  Q
    ||| |||||||| || |||||||| |||||||||   ||||||||| ||||||    
T  10563524 caattgcttatgctggtagataagttcaaataagtcaatccaaacaggccctt 10563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 11063218 - 11063343
Alignment:
Q  104 tgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatag 203  Q
    ||||||||||||||||||||||||  ||||||||| |||| | |  | ||||||||| ||||||||||| ||| ||  || ||| ||||| ||||  |||    
T  11063218 tgaagagcttatggaaataagctgaaaacagcttacggacttcttgttagttgcttccataagctcttcaaaatagtctcgcaaatgcttgtgttagtag 11063317  T
Q  204 ataagctcaaataagcttatccaaac 229  Q
    ||||| ||||||||||| ||||||||    
T  11063318 ataagttcaaataagctaatccaaac 11063343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 43141878 - 43142011
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgctt-caataagctcttccaaacagcatca 184  Q
    ||||||||||||||||| ||||||| ||||||||||||  ||  |||| |||| || |||||||||||||| || | |||||| ||  ||||| |  |||    
T  43141878 tgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgtttcccataagcgctgtcaaactgtttca 43141977  T
Q  185 caagtgcttatgttgatagataagctcaaataag 218  Q
    ||| ||||||||||  ||||||||||||||||||    
T  43141978 caattgcttatgttagtagataagctcaaataag 43142011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 1939395 - 1939325
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||||||||||||  || |||||||||||||||||| ||  ||||||||| |||||||||||||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttg 1939325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 3235447 - 3235315
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||  |||||||||| || ||||||||||||||||  ||||||||| | || ||||   ||||| ||| |||||||||||  |||| | ||||    
T  3235447 tgttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatgaacctgtcgctagttgtttccataagctcttcgtaacaacttcac 3235348  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
     | ||||||||||  ||||||| ||||||||||    
T  3235347 gaatgcttatgttagtagataaactcaaataag 3235315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 43456782 - 43456638
Alignment:
Q  74 ataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttcc 173  Q
    ||||||| |||||||||   |||||||||||||| | | |||||||||||||||  ||||| ||| ||||||||||| ||||| ||  | |||||||| |    
T  43456782 ataaagtcaaattgtttctgtaagctatcttgaaaaacatatggaaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttc 43456683  T
Q  174 aaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||  | ||||||| ||||||   || ||||| |||||||||    
T  43456682 aaacagtcttacaagtgtttatgtgagtaaataagttcaaataag 43456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 7282983 - 7283114
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    |||| ||||| |||| ||| |||||||||||||||| | | |||||||||||| ||||| ||  |||| |||| |||||| |||||||||| ||| | ||    
T  7282983 aagaaaaaatgaagtcaaactgttttcataagctatgtgggagagcttatggatataagatgaaaacaacttatggacatatcataagttgtttccaaaa 7283082  T
Q  166 gctcttccaaacagcatcacaagtgcttatgt 197  Q
    |||  |||||| ||  ||||||||| ||||||    
T  7283083 gctaatccaaatagtctcacaagtgtttatgt 7283114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 18884899 - 18885006
Alignment:
Q  111 cttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagct 210  Q
    ||||||||||||| |||  ||||||| | ||| |||||||||| || ||| ||||||||| ||||||||| | |||||| |||||||  ||||||| |||    
T  18884899 cttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagctctcccaaacagccttacaagttcttatgtcaatagatacgct 18884998  T
Q  211 caaataag 218  Q
    | ||||||    
T  18884999 cgaataag 18885006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 35329872 - 35329817
Alignment:
Q  95 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 150  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||    
T  35329872 aagctatcttggagagcttatggaaataagctggaaacaacttaggggcatgtcat 35329817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 1742095 - 1742005
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||||||| ||||| ||||||| ||||||||||||| ||   | |||||| | ||||||||||||||| ||| ||||||||| |||||    
T  1742095 tgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcccaaa 1742005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 25609862 - 25609936
Alignment:
Q  145 tgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagc 219  Q
    |||||||||||| ||| ||||||| |||||| |||  |||||||| ||||||||  |||||||||||||||||||    
T  25609862 tgtcataagttgtttccataagctattccaagcagtctcacaagttcttatgttagtagataagctcaaataagc 25609936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 43985067 - 43985025
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  43985067 ttgttttcataagctatcttgaagagcttatgaaaataagctg 43985025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 36852479 - 36852548
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||||||||||||||||||| ||||||||||||||||| |||  || || |||  |||||||||||||||    
T  36852479 tgttttcataagctatcttggagagcttatggaaataatctgaaaatagtttatagacatgtcataagtt 36852548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 43065514 - 43065429
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||| |||| || ||||||||| |||||||||||  ||||  ||| ||||||||||||||||| ||  |||||||||    
T  43065514 ttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctct 43065429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 43985215 - 43985348
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||  ||||||| | ||||||||||||||||| ||| ||  || |||||| ||||||||||||||||| |||| ||| ||||  |||||||  | |    
T  43985215 ttgtttttgtaagctaccgtgaagagcttatggaaacaagttgaaaaaagcttatggacatgtcataagttgtttcagtaatctctctcaaacagtttta 43985314  T
Q  185 caagtgcttatgttgatagataagctcaaataag 218  Q
    |||||| ||||||   ||||||| || |||||||    
T  43985315 caagtgtttatgtcagtagataaacttaaataag 43985348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 14299695 - 14299563
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||| | ||||||||  | ||||||| |||||||||||  ||||   || ||| ||||||||||||| ||| |||| |||||||||||||   |     
T  14299695 ttgttttcacaggctatctttgacagcttatagaaataagctgaaaacaatgtatggatatgtcataagttgtttccataaactcttccaaacagtccct 14299596  T
Q  185 caagtgcttatgttgatagataagctcaaataa 217  Q
    |||||||||| |||| ||| ||| |||||||||    
T  14299595 caagtgcttacgttggtagctaaactcaaataa 14299563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 31228922 - 31228791
Alignment:
Q  66 aagataaaataaagtgaaattgttttcata--agctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaat 163  Q
    ||||||||||||||  ||||||||||||||  || |||| || |||| |||||||||||| ||   |||||||||   ||||||||||| ||| || |||    
T  31228922 aagataaaataaaggcaaattgttttcatataagttatcatggagagtttatggaaataacctaaaaacagcttatatacatgtcataaattgtttgaat 31228823  T
Q  164 aagctcttccaaacagcatcacaagtgcttat 195  Q
    |||| || ||||||||  ||||||||| ||||    
T  31228822 aagcactcccaaacagtctcacaagtgtttat 31228791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 40943977 - 40944064
Alignment:
Q  143 catgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||||||||||| || ||  |||| || ||||||||||  ||||||||||||||||   ||||||| |||||||||||| |||||||||    
T  40943977 catgtcataagctgttttcataaacttttccaaacagtttcacaagtgcttatgtcattagataaactcaaataagctaatccaaaca 40944064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 43635165 - 43635074
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||| |||||||||||| |||| |||||||| |||||||||   |||||||||  |||||||||||||||  ||| ||| ||||| |||||    
T  43635165 ttgttctcataagctatcatgaaaagcttatgaaaataagcttaaaacagcttacagacatgtcataagttttttctatatgctctcccaaa 43635074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 15377772 - 15377905
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaac-agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||||  ||| ||||||||| |||||| ||   ||  |||||| |||| |||||||||||| ||| ||| | | ||||||||||| | |    
T  15377772 tgttttcataagctattctgaggagcttatgaaaataaacttaaaaatagcttatggacgtgtcataagttgtttccata-gattttccaaacagcctta 15377870  T
Q  185 caagtgcttatgttgatagataagctcaaataagc 219  Q
    ||| ||||||||||  || ||||||||||||||||    
T  15377871 caattgcttatgttagtacataagctcaaataagc 15377905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 36863692 - 36863650
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  36863692 aaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 41144202 - 41144284
Alignment:
Q  71 aaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||  ||||||||||||||||||| |||| |||| || ||||||||||||   |||| ||||  |||||||||||||    
T  41144202 aaaataaagacaaattgttttcataagctaacttggagagtttctggaaataagctaaaaacaacttattgacatgtcataag 41144284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 787365 - 787486
Alignment:
Q  112 ttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctc 211  Q
    ||||||| ||||||||  ||||||||| |||||||||||||| || ||  ||||| |||  |||||||  |||||||||||||||    |||||| ||||    
T  787365 ttatggagataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagatatgctc 787464  T
Q  212 aaataagcttatccaaacaagc 233  Q
     ||||| |  ||||||||||||    
T  787465 gaataatccaatccaaacaagc 787486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 7871650 - 7871691
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  7871650 tgttttcataagctcttttgaagagcttatggaaataagctg 7871691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 12313240 - 12313087
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagca 181  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| ||  | || |||| | ||||| |||||| || ||  ||||  ||| |||||||       
T  12313240 aaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatc 12313141  T
Q  182 tcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    ||||||||||||||| |  | | |||| ||||||||||| || |||||| ||||    
T  12313140 tcacaagtgcttatgctagtgggtaagatcaaataagctaatacaaacaggccc 12313087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 28803546 - 28803461
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||| ||||||||||||||||| ||| ||| | |||  |||||||  ||||| |||||||||  | ||||||||||||||||||    
T  28803546 agcttatggacatgtcataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataag 28803461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 28933827 - 28933923
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||||||||||||||||| |  |||||| || |||||||| ||  |||||| || | ||||| ||||||||| ||  ||||||||||||||||||    
T  28933827 aaattgttttcataagctatcctagagagctgatagaaataagttgaaaacagc-tatgaacatgccataagttgttttcataagctcttccaaacag 28933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 33256748 - 33256837
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    |||||||||||| ||| |||||| | |||| |||||||||| |||||| ||| | |||||||||||| || ||  ||||||||| |||||    
T  33256748 gttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataagctgttttcataagctctcccaaa 33256837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 35379079 - 35379038
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctg 35379038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 41809299 - 41809198
Alignment:
Q  95 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctta 194  Q
    ||||||||||  | ||||||||||||||||||   |||| |||| | ||||||||||||||| ||| | |||||||| ||| |||  ||||||||| |||    
T  41809299 aagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttccacaagctcttacaatcagtctcacaagtgttta 41809200  T
Q  195 tg 196  Q
    ||    
T  41809199 tg 41809198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 44606193 - 44606080
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    ||||||||||||||   ||||||||||||||| |||  | ||   |||||| |||| |||||  |||| |||| ||||||||||||||||| ||  ||||    
T  44606193 aagataaaataaagaccaattgttttcataagttattctaaaacacttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataa 44606094  T
Q  166 gctcttccaaacag 179  Q
    | ||||||||||||    
T  44606093 gttcttccaaacag 44606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 3067442 - 3067402
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  3067442 tgttttcataagctatcttgaagagtttatgaaaataagct 3067402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 3312199 - 3312239
Alignment:
Q  201 tagataagctcaaataagcttatccaaacaagcccttagtt 241  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  3312199 tagataagctcaaataagccaatccaaacaagcccttagtt 3312239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 3673729 - 3673801
Alignment:
Q  23 gtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    |||| |||||| ||| ||||||| | |||||||| ||| ||| || |||||||||||| ||||||||||||||    
T  3673729 gtttgtcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcata 3673801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 9996803 - 9996899
Alignment:
Q  144 atgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttagt 240  Q
    ||||||||||||| ||| ||||||||| |||| |||  |||||||| |||||| |  | ||||||||||||||||   | ||||||| |||||||||    
T  9996803 atgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaacaggcccttagt 9996899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 42131626 - 42131714
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||||||||||| || ||| |||| |||||||||||   | ||||||| |||||||| |||||||| ||| || | ||||||||||    
T  42131626 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttccatcatctcttccaaa 42131714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 43259841 - 43259881
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  43259841 tgttttcattaggtatcttgaagagcttatggaaataagct 43259881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 1056414 - 1056375
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  1056414 ttttcataagctatcttgaagagtttatagaaataagctg 1056375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 6988121 - 6988160
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  6988121 ttgttttcataagctatcttgaagagtttatagaaataag 6988160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 9174822 - 9174893
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggac-atgtcataagttg 156  Q
    |||||||||||||||||||  |||||||||| ||||||||||  || |||||| | || |||||||||||||    
T  9174822 tgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttg 9174893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 11956228 - 11956271
Alignment:
Q  69 ataaaataaagtgaaattgttttcataagctatcttgaagagct 112  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||    
T  11956228 ataaaataaagtaaaattgttttcataaactatcttgtagagct 11956271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 16947089 - 16947143
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    ||||||||||||||| ||| ||||||| ||||||||||| |||| |||||||||||    
T  16947089 acatgtcataagttg-ttccataagctgttccaaacagcctcactagtgcttatgt 16947143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 17017754 - 17017808
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    ||||||||||||||| ||| ||||||| ||||||||||| |||| |||||||||||    
T  17017754 acatgtcataagttg-ttccataagctgttccaaacagcctcactagtgcttatgt 17017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 18179300 - 18179161
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaag 188  Q
    |||||||||||||| || ||| |||| | ||||||||||  || |||| | ||||||||| |||| || ||  |||| | ||||||||||   | |||||    
T  18179300 tttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacacttccaaacaaacttacaag 18179201  T
Q  189 tgcttatgttgatagataagctcaaataagcttatccaaa 228  Q
    |||||||||   |||||||||| ||||||||  |||||||    
T  18179200 tgcttatgtaactagataagcttaaataagccaatccaaa 18179161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 25661116 - 25661207
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||| ||| ||||| |||||||||||||||||||| |||  ||||| ||| |||||| ||||||| |  |||  |||||||| ||||||||    
T  25661116 ttttcgtaaactatcctgaagagcttatggaaataatctgaaaacagtttaaggacatttcataagctatttccgtaagctctgccaaacag 25661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 29316838 - 29316771
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||| |||||||||| ||| |||||||||||||||||  || | |||| | ||||||||||||    
T  29316838 tgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataag 29316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 32098427 - 32098352
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||| ||| ||| ||||||||||||||| ||| |||||||||||| |||  || ||| |||| ||||||||||||    
T  32098427 tatttctataacaaaagataaaataaagtcaaagtgttttcataagttattatggagaacttacggaaataagctg 32098352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 33061329 - 33061266
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttat 115  Q
    ||||| ||| ||| ||||||||  ||||| ||| ||| ||||||||||||||||||||||||||    
T  33061329 tatttctataacaaaagataaagcaaagttaaactgtgttcataagctatcttgaagagcttat 33061266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 1810670 - 1810712
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||    
T  1810670 ttgtttttataagctatcttgaagagtttatgaaaataagctg 1810712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 3227763 - 3227705
Alignment:
Q  69 ataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||| ||||| |||||||||||||||||||| ||| |||| || || ||||||||||    
T  3227763 ataaaacaaagttaaattgttttcataagctattttggagagattttgaaaataagctg 3227705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 11063518 - 11063588
Alignment:
Q  109 agcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||| |||||||||   |||| |||| |||||||||||||  || ||| ||||||||||||||||||    
T  11063518 agcttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttccataagctcttccaaacag 11063588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 16867746 - 16867784
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  16867746 tgttttcacaagctatcttggagagcttatggaaataag 16867784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 27237935 - 27237845
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    |||| |||||||||||||||   ||||||||| | |||||||||||| || ||| ||||| ||| ||||||||  |||| |||| ||||||    
T  27237935 agagtttatggaaataagctaaaaacagcttatgtacatgtcataagctgtttctataagttctaccaaacagtttcactagtgtttatgt 27237845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 35809857 - 35809926
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    ||||||||| ||| ||||||| | ||||||||  |||||| ||||||||||||| | ||||||||||||||    
T  35809857 ttatcatataagtgcttatgtataagttatttccatgaca-aagataaaataaaatcaaattgttttcata 35809926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 40837499 - 40837457
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  40837499 ttgttttaataagctatcatgtagagcttatggaaataagctg 40837457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 680512 - 680577
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||||||| ||| || ||||||||||  ||||| |||   ||||||||||||    
T  680512 ttttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataag 680577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 750461 - 750514
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatc-ttgaagagcttatgga 118  Q
    |||||||||||| || ||||||| ||||||||||||| ||| ||||||||||||    
T  750461 aagataaaataatgttaaattgtcttcataagctatcattggagagcttatgga 750514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 1830075 - 1830144
Alignment:
Q  109 agcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaaca 178  Q
    |||||||||||||||||||  |||  | || |||||||||||||| || ||| ||||||||| |||||||    
T  1830075 agcttatggaaataagctgaaaactccctatggacatgtcataagatgtttccataagctctcccaaaca 1830144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 7928256 - 7928207
Alignment:
Q  191 cttatgttgatagataagctcaaataagcttatccaaacaagcccttagt 240  Q
    |||||||  ||||||||||||||||||||  ||||||||| |||||||||    
T  7928256 cttatgtcaatagataagctcaaataagccaatccaaacaggcccttagt 7928207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 13325694 - 13325727
Alignment:
Q  203 gataagctcaaataagcttatccaaacaagccct 236  Q
    |||||||||||||||||| |||||||||||||||    
T  13325694 gataagctcaaataagctgatccaaacaagccct 13325727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 14277897 - 14277824
Alignment:
Q  145 tgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||||| ||| || ||||||||||||||   |||||||| |||||||   ||||||| ||||||||||    
T  14277897 tgtcataagttgtttccatgagctcttccaaacactctcacaagtacttatgtccgtagataaactcaaataag 14277824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 15780083 - 15780124
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  15780083 ttgttttcataagctatcgtgcagagcttatagaaataagct 15780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 22878164 - 22878237
Alignment:
Q  145 tgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||| ||| ||| ||||| ||| ||||||||  ||||||||||||||||   | ||||||||||||||||    
T  22878164 tgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataag 22878237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 28810431 - 28810362
Alignment:
Q  170 ttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttag 239  Q
    ||||||||||| ||||||||| |||||   ||||| |||||||||||||   ||||||||| ||||||||    
T  28810431 ttccaaacagcctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaacaggcccttag 28810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 34054872 - 34054835
Alignment:
Q  182 tcacaagtgcttatgttgatagataagctcaaataagc 219  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  34054872 tcacaagtgcttatgttggtagataagctcatataagc 34054835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 38078474 - 38078433
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||||||| |||||||||| |||| ||||    
T  38078474 ttgttttcataagctatcttggagagcttatgtaaatgagct 38078433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 38388678 - 38388802
Alignment:
Q  70 taaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg-ggaacagcttagggacatgtcataagttgcttcaataagct 168  Q
    ||||||||||| ||||||||| | ||||| ||  |||||| |||||||||||||||||   ||||| ||| | ||||||||||||||| | | ||||| |    
T  38388678 taaaataaagtcaaattgttt-cgtaagccattctgaagaacttatggaaataagctgaaaaacagtttatgaacatgtcataagttgttaccataagtt 38388776  T
Q  169 cttccaaacagcatcacaagtgctta 194  Q
    || |||||| |   ||||||||||||    
T  38388777 ctcccaaacggtcacacaagtgctta 38388802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 40672927 - 40672866
Alignment:
Q  40 ttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctat 101  Q
    |||||| | |||||||| ||||| | ||||||||||||||| | ||||||||||||| ||||    
T  40672927 ttatgtataagttatttctatgaaaaaagataaaataaagtcacattgttttcataaactat 40672866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 41042083 - 41042006
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    ||||||| || ||||||| |||| ||||||||||||| ||  ||||||| | |||||||| |||||||| ||| ||||    
T  41042083 ttttcatgagttatcttggagagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataa 41042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 43205316 - 43205397
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagc 167  Q
    |||||||||||||||||  | |||||||||||||||||| ||  ||||| ||  |||||||| ||| |||| ||| ||||||    
T  43205316 tgttttcataagctatcacggagagcttatggaaataagttgaaaacagtttgcggacatgttatatgttgtttccataagc 43205397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 43591573 - 43591532
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||  ||||||||| |||||||||||||    
T  43591573 tgttttcataagctatcccgaagagcttgtggaaataagctg 43591532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 44644285 - 44644326
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||| || ||||||||||||||||||| ||||||||||    
T  44644285 tgttttcaaaaactatcttgaagagcttatgaaaataagctg 44644326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 3078703 - 3078663
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||| ||||||||||||| ||||||| ||||||||||||    
T  3078703 tgtttttataagctatcttggagagcttctggaaataagct 3078663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 9878701 - 9878637
Alignment:
Q  130 aacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctta 194  Q
    |||| |||| ||||||||||||||||| ||| ||||||||||||  ||||  ||| |||||||||    
T  9878701 aacaacttatggacatgtcataagttgtttccataagctcttccctacagtctcagaagtgctta 9878637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 10285892 - 10285936
Alignment:
Q  111 cttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||    
T  10285892 cttatggaaataagttgaaaacagcttatggacatgtcataagtt 10285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 12464679 - 12464723
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||||||| |||||| |||||||||| ||||| ||||    
T  12464679 taagctatcttgaagaacttatgaaaataagctgagaacaactta 12464723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 14451103 - 14451043
Alignment:
Q  96 agctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||| ||||| | ||||| |||||||||||||  ||||||||| || ||||||||||||||    
T  14451103 agctgtcttggatagcttgtggaaataagctgaaaacagcttatggtcatgtcataagttg 14451043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 16503364 - 16503492
Alignment:
Q  91 tcataagctatcttgaagagcttatggaaataagctgggaacagcttagg-gacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||| ||||||| |||| ||||| ||||||||||  | | ||||| | ||||||||||||| |  |||  |||||||| ||||||||  ||||||||    
T  16503364 tcataagttatcttggagaggttatgaaaataagctgaaaccggcttatgtgacatgtcataagctatttctctaagctctcccaaacagtgtcacaagt 16503463  T
Q  190 gcttatgttgatagataagctcaaataag 218  Q
     ||||||    ||||||| ||||||||||    
T  16503464 acttatgccactagataatctcaaataag 16503492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 18962186 - 18962114
Alignment:
Q  23 gtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    ||||||||| | ||| ||||||| | || ||||| ||| ||| ||||||||||||||| ||| ||||||||||    
T  18962186 gtttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcata 18962114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 35391204 - 35391151
Alignment:
Q  72 aaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||  |||||||||||    
T  35391204 aaataaagtcaaactgttatcataagctatcttggagagctta--gaaataagctg 35391151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 40759263 - 40759299
Alignment:
Q  182 tcacaagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||||||||  |||||||||||||||||||    
T  40759263 tcacaagtgcttatgtcaatagataagctcaaataag 40759299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 42817439 - 42817399
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||  |||||||||||||||| ||||||    
T  42817439 tgttttcataagctattctgaagagcttatggaagtaagct 42817399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 43259938 - 43259994
Alignment:
Q  182 tcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccctta 238  Q
    ||||||||||||||| |  |||||||| ||||||||||  |||||||||| ||||||    
T  43259938 tcacaagtgcttatgctagtagataagttcaaataagccaatccaaacaatccctta 43259994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 2455819 - 2455949
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||||||||||| |||||||||||||||||| ||  || || ||| || |||||||||||||| ||| ||||||||||| |||||   || |||    
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctcttctaaacaatctcgcaa 2455918  T
Q  188 gtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||  | ||||||||||||||||||    
T  2455919 gtgcttatgccggtagataagctcaaataag 2455949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 2205673 - 2205612
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  2205673 aagataaaacaaagtcaaattgttttcataagctatcttggagagcttatggaaataagctg 2205612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 31583667 - 31583827
Alignment:
Q  67 agataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    ||||||||| |||| |||||||||||||||||||||  ||| |||||||||||||||| ||  |||| |||| ||||||||||| ||  | || ||||||    
T  31583667 agataaaatgaagtcaaattgttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggacatgtcattagcggtttaaataag 31583766  T
Q  167 ctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaa 228  Q
    |||| | ||||||  ||| ||| ||||||| |  |||| ||||| ||||||||| |||||||    
T  31583767 ctctccaaaacagtctca-aagggcttatgcttgtagacaagctgaaataagctaatccaaa 31583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 281907 - 281800
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||||||||| |  |||||| ||||||||||||||  |||| ||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||    
T  281907 ttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctctcccaaacagtctcacaagt 281808  T
Q  190 gcttatgt 197  Q
     |||||||    
T  281807 acttatgt 281800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 4420652 - 4420735
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctctt 171  Q
    ||||| |||||||||||| |||||||||||||||||||||  ||||||||| | ||||||||||| ||| ||| ||||||||||    
T  4420652 ttttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataagctctt 4420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 10476185 - 10476032
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||||||||| |||||| || |||||||||||  ||||  ||| |  |||||||| || || ||| |||||||||   ||||||  |||    
T  10476185 ttgttttcataagctatcttggagagct-atagaaataagctgaaaacaatttacgagcatgtcattagatgtttccataagctctcataaacagtctca 10476087  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttag 239  Q
     |||||||||||||| |||| ||  |||||||| || ||||||||||||||||||    
T  10476086 gaagtgcttatgttggtagaaaaaatcaaataatctaatccaaacaagcccttag 10476032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 2460206 - 2460070
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    ||||||||  || |||||||||||||||||| ||  |||| ||||  |||||||||||||||| ||| |||||||||  |||||||  |||||||| |||    
T  2460206 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtactt 2460107  T
Q  194 atgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||| |  |  ||||||||||||||| | |||||||||    
T  2460106 atgctagtttataagctcaaataagttaatccaaaca 2460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 10031735 - 10031850
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagca 181  Q
    |||||||||| ||||||| ||||| |||||||| ||||||||| ||  |||| |||| ||| ||||| ||||||| ||  ||| |||||| |||||||      
T  10031735 aaattgtttttataagctgtcttggagagcttaaggaaataagatgaaaacaacttatggatatgtcgtaagttggtttcataggctctttcaaacagtc 10031834  T
Q  182 tcacaagtgcttatgt 197  Q
    ||||||||||||||||    
T  10031835 tcacaagtgcttatgt 10031850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 34939526 - 34939604
Alignment:
Q  92 cataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||| ||||||| ||||||||||||||||  |||| |||| |||| |||||||||||| ||| |||||||||    
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctct 34939604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 32578042 - 32577965
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    |||||||||| |||||||| |||||||||||||||  ||||||| | ||||||||||||||||| ||  |||||||||    
T  32578042 ataagctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctct 32577965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 5564192 - 5564124
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||  ||||||||  ||||||||||||||    
T  5564192 ttgttttcataagctgtcttgaagagtttatgcaaataagctgaaaacagctttcggacatgtcataag 5564124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 8420252 - 8420129
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    ||||||||  || |||||||||||||||||| ||  || |||||  |||||||||||||| |  ||| |||||||||  | |||||  ||||||||| ||    
T  8420252 taagctataatggagagcttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtgttt 8420153  T
Q  194 atgttgatagataagctcaaataa 217  Q
    ||||  ||||||||||||||||||    
T  8420152 atgtcaatagataagctcaaataa 8420129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 30863254 - 30863385
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcaca 186  Q
    ||||||||| |||| |||||||||||||| ||| |||||||  |||| |||| | ||||||||||||||| ||  ||||||||| ||||| ||  | |||    
T  30863254 gttttcataggctagcttgaagagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataagctctaccaaagagtctaaca 30863353  T
Q  187 agtgcttatgttgatagataagctcaaataag 218  Q
    |||| |||||   ||| ||| |||||||||||    
T  30863354 agtgtttatgccaataaataggctcaaataag 30863385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 9027604 - 9027678
Alignment:
Q  105 gaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||||||| ||||||||||  |||| |||| ||||||||||||||||  ||| |||||||||| |||||||    
T  9027604 gaagagcttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacag 9027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 34939755 - 34939881
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||||||||| || |||| ||||||||||||||||  ||||  ||| |||||||||||||| || |||  |||||||| | ||||||  |||||| |    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaaat 34939854  T
Q  190 gcttatgttgatagataagctcaaata 216  Q
    | ||||||   |||||||||| |||||    
T  34939855 gtttatgtcactagataagctgaaata 34939881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 10616603 - 10616514
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||| ||||||||| ||| |||||||||  ||||||||||   ||| |||| ||||||||||||||||| ||| ||||||||| |||||    
T  10616603 gttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaa 10616514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 28088285 - 28088137
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| || |||||| |||||||||||||   |||| | ||  ||||||| |||||||| ||| ||||||  |||||||| |  |||     
T  28088285 tgttttcataagctatcatggagagctcatggaaataagctcaaaacaacctatagacatgt-ataagttgtttccataagccattccaaactgtctcaa 28088187  T
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    ||||| |||| |  ||| |||||||||||||||  |||||||||| ||||    
T  28088186 aagtggttatatcaataaataagctcaaataagtctatccaaacaggccc 28088137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 3155185 - 3155311
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||| |||| || |||||| ||||||||||||||  |||||||||  ||||||||||||||||  |  |||||||||| ||||  |  || |||    
T  3155185 ttttcataagatatcctggagagct-atggaaataagctgaaaacagcttatagacatgtcataagttgtgtatataagctctttcaaatggtctctcaa 3155283  T
Q  188 gtgcttatgttgatagataagctcaaat 215  Q
    ||| ||||||   |||||||||||||||    
T  3155284 gtgattatgtctgtagataagctcaaat 3155311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 7931790 - 7931703
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttc 172  Q
    ||||||||| |||||||| |  |||||||| ||||||||||||  |||| |||| | ||||||||||||||| ||  |||||||||||    
T  7931790 ttgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctcttc 7931703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 9668049 - 9667978
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||||| || | | | |||||||||||||||||| ||  ||||||||| |||||||||||||||||    
T  9668049 ttgttttcataaactgtttcggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttg 9667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 27894053 - 27894120
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||| ||||||||| |||||||| ||||||||||  ||||| ||| |||||| |||||||    
T  27894053 tgttttcataagatatcttgaaaagcttatgaaaataagctgaaaacagtttatggacatatcataag 27894120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 32975984 - 32976095
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||||| || |  | |||| |||  | ||||  ||||||||| ||| |||||||||| || ||| ||||||||||||||||||  |||    
T  32975984 ttgttttcataagctatcctggaatgattatagaagcacgctgaaaacagcttatggaaatgtcataagctgtttctataagctcttccaaacagtctca 32976083  T
Q  185 caagtgcttatg 196  Q
    ||||| ||||||    
T  32976084 caagtacttatg 32976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 4324536 - 4324446
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||  |||| ||| ||||||||||||||||| || | | |||||| |||||||||   | ||| |||||||||||||||||||||    
T  4324536 aagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttg 4324446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 7148675 - 7148805
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||| |||||||| | || |||||||||| ||||||| ||  || |||||| ||||| ||||||||||| |||  |||||||| |  ||||   ||||||    
T  7148675 ttttaataagctaccctggagagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaa 7148774  T
Q  188 gtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||    ||||||||||||||||||    
T  7148775 gtgcttatgcgactagataagctcaaataag 7148805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 13908479 - 13908537
Alignment:
Q  95 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||| ||||||||||||| ||||||||||  ||||||||| | ||||||||||||    
T  13908479 aagctatcatgaagagcttatgaaaataagctgaaaacagcttacgaacatgtcataag 13908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 19275699 - 19275633
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    ||||||||||||||||| |||||||||||||||||||| | |  | ||||||  |||||||||||||    
T  19275699 tgttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataa 19275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 32917251 - 32917313
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttat 195  Q
    |||||| ||||||||||||||||| ||| ||||||||| ||||||||  ||||||||| ||||    
T  32917251 agcttatggacatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttat 32917313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 26694881 - 26694926
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||    
T  26694881 aaattgttttcataaactatcttgaagaacttatgaaaataagctg 26694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 31812077 - 31812036
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  31812077 ttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 33284294 - 33284398
Alignment:
Q  130 aacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaac 229  Q
    ||||||||| ||| ||||||||||||| |||  |||||| | |||  |||  || ||||| ||||||||| ||| |||||||||||||||  ||||||||    
T  33284294 aacagcttatggaaatgtcataagttgtttccctaagctat-ccagtcagtctctcaagttcttatgttgttaggtaagctcaaataagccaatccaaac 33284392  T
Q  230 aagccc 235  Q
    ||||||    
T  33284393 aagccc 33284398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 3181131 - 3181000
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||| ||||||| |||||| || ||||||||| || || | ||||   |||| |||||||||| ||  || ||||||| |||| ||  ||||    
T  3181131 tgttttcataagttatcttggagagct-attgaaataagccggaaataacttataaacatttcataagttgtttacattagctctttcaaatagtctcac 3181033  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||||   |||||||| |||||||||    
T  3181032 aagtgcttatgtctgtagataagttcaaataag 3181000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 32171446 - 32171314
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||| || |||| || | |||||||||||||||||||  || |||||  |||| ||||||||| || ||  |||||||||  |||||||  || |    
T  32171446 tgttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcgc 32171347  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||||  |||  |||||| |||||||    
T  32171346 aagtgcttatgtcaatacttaagctgaaataag 32171314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 1401116 - 1401163
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaaca 133  Q
    ||||||||||||||||| || |||||||||||| |||||||| |||||    
T  1401116 tgttttcataagctatcatggagagcttatggagataagctgagaaca 1401163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 3168324 - 3168257
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||| ||||||||| || |||||||| ||||||||||||  ||||||  | ||||||||||||||    
T  3168324 tgttttcttaagctatcctggagagcttaaggaaataagctgaaaacagccgatggacatgtcataag 3168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 6536972 - 6537023
Alignment:
Q  104 tgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    ||||||||||||||||||||||||  |||| |||| | ||||||||||||||    
T  6536972 tgaagagcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 6647394 - 6647461
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||||  |||||||||| ||||||| ||  |||| |||| | ||||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 25100049 - 25100088
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  25100049 ttgttttcataagctatcttaaagagcttatagaaataag 25100088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 2034507 - 2034425
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||| | || ||||||||  |||||||||||  ||||||||| ||| |||||||||| || ||| |||| ||||    
T  2034507 ttttcataagctaacatgtagagcttaatgaaataagctgaaaacagcttatggaaatgtcataagctgtttccataaactct 2034425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 13907853 - 13907891
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataa 123  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  13907853 ttgttttcaaaagctatcttgaagagcttatgaaaataa 13907891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 20512704 - 20512666
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  20512704 tttcataagctattatgaagagcttatggaaataagctg 20512666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 24836264 - 24836218
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctgggaaca 133  Q
    |||||| ||||||||| || |||||||||||||||||||||| ||||    
T  24836264 gttttcgtaagctatcatggagagcttatggaaataagctggaaaca 24836218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 34403862 - 34403932
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||||||| |  | ||||||||||||||||||| ||  |||| |||| | |||||||||||||||    
T  34403862 tgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttg 34403932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 2023450 - 2023321
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||| |||||| ||  | |||||||| ||||||| ||  |||| ||||  |||| || ||||| || ||| || |||||||||||||||  |||    
T  2023450 ttgttttcattagctattttttaaagcttatgaaaataagttgaaaacaacttatagacaagttataagctggttctatgagctcttccaaacagtctca 2023351  T
Q  185 caagtgcttatgttgatagataagctcaaa 214  Q
    | |||||||| | | ||| |||||||||||    
T  2023350 ctagtgcttacgctaataaataagctcaaa 2023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 3528811 - 3528880
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||| | |||||||| |||||||||| ||||||| ||  ||||  ||| |||||||||||||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttg 3528880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 7901838 - 7901750
Alignment:
Q  141 gacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||||| || ||||||| |||| |||||||||||||||||  ||||||| ||||||| |  || |||| |||||||||| | |||||||||    
T  7901838 gacatatcttaagttgtttca-taagctcttccaaacagtctcacaagggcttatgatactatataaactcaaataagttaatccaaaca 7901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 33787808 - 33787767
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||| ||||||| |||||||||||||||| ||||    
T  33787808 tgttttcataagttatcttggagagcttatggaaataggctg 33787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 35070433 - 35070384
Alignment:
Q  183 cacaagtgcttatgttgatagataagctcaaataagcttatccaaacaag 232  Q
    ||||||||||||||||  ||||||||||||||||||   |||||||||||    
T  35070433 cacaagtgcttatgttagtagataagctcaaataagaaaatccaaacaag 35070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 283125 - 283213
Alignment:
Q  109 agcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    ||||||| |||||||||||  || || ||| |||||||||||||| || ||  ||| | || |||||||||  ||||||||||||||||    
T  283125 agcttatagaaataagctgaaaatagtttatggacatgtcataagctgtttttatacgttcctccaaacagtttcacaagtgcttatgt 283213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 725698 - 725634
Alignment:
Q  106 aagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||||||||||||  || ||  || ||||||||||||||||| ||  |||||||||    
T  725698 aagagcttatggaaataagctgaaaatagtctacggacatgtcataagttgttttcataagctct 725634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 835311 - 835271
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||| ||| |||||| ||||||||||    
T  835311 gttttcataagctatcttggagaacttatgaaaataagctg 835271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 2117409 - 2117493
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctc 169  Q
    ||||||||||||| |||| |  ||||||||| ||||||||||   |||||||||  |||||| ||||| ||| ||| ||||||||    
T  2117409 ttgttttcataagttatcctagagagcttattgaaataagctaaaaacagcttatagacatgccataaattgtttctataagctc 2117493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 2456993 - 2457092
Alignment:
Q  130 aacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaac 229  Q
    ||||||||| |||||| | ||||| |||||| | |||  || ||||||||  | |||||||||||||| | ||||||| |||||||||||  ||||||||    
T  2456993 aacagcttatggacatattataagctgcttccacaagtgct-ccaaacagtcttacaagtgcttatgtcggtagataatctcaaataagccaatccaaac 2457091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 7785796 - 7785740
Alignment:
Q  97 gctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||| ||| |||||||||||||||||||||  |||| ||||  |||||||||||||    
T  7785796 gctattttggagagcttatggaaataagctgaaaacaacttatagacatgtcataag 7785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 24811148 - 24811108
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaata 122  Q
    |||||||||| |||||||| |||| ||||||||||||||||    
T  24811148 aaattgtttttataagctaccttgtagagcttatggaaata 24811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 24836330 - 24836278
Alignment:
Q  40 ttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttc 92  Q
    |||||| | |||||||| ||| ||| ||||||||||||||| |||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttc 24836278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 27857412 - 27857496
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataa 217  Q
    |||||| ||| ||||||||||||| ||  ||||||||| ||||||||  |||||||||  |||||   ||||||| |||||||||    
T  27857412 agcttatggagatgtcataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataa 27857496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 27909680 - 27909636
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||||||||||||||||||||  |||| |||| ||||||||||||    
T  27909680 agagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 30523948 - 30523984
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30523948 ttcataagctatcctaaagagcttatggaaataagct 30523984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 2996579 - 2996714
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||  || |||||| ||||||||||||||||| ||  |||||||||  |||||||  |||    
T  2996579 ttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctca 2996678  T
Q  185 caagtgcttatgttgatagataagctcaaataagct 220  Q
     ||||||||||||  ||| ||||| |||||||||||    
T  2996679 aaagtgcttatgtcaataaataagttcaaataagct 2996714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 21157775 - 21157908
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||| |||||| |||||||||||||||||||||||   ||||||||  | | |||||||||| || |||  |||||||||||||||||  | ||    
T  21157775 tgttttcatatgctatcctgaagagcttatggaaataagctaaaaacagcttttgtaaatgtcataagctgtttctgtaagctcttccaaacagtcttac 21157874  T
Q  186 aagtgcttatgttgatagataagctcaaataagc 219  Q
    ||||||||||||   ||||| |||||||||||||    
T  21157875 aagtgcttatgtcagtagatgagctcaaataagc 21157908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 4798630 - 4798496
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||||||||| |||||||||| |||||||||   ||||||||| | |||||||| |||  | ||| |||||||||||| |||||  |||    
T  4798630 ttgttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttccataagctcttcctaacagtctca 4798531  T
Q  185 caagtgcttatgttgatagataagctcaaataagc 219  Q
    |||||| || |||| |||||  || ||||||||||    
T  4798530 caagtgtttttgttaatagagtagttcaaataagc 4798496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 25717654 - 25717750
Alignment:
Q  140 ggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccct 236  Q
    ||||| ||||||||||| ||| |||||||||||||||||   |||||||||||||||| | || |||||||||||||||   |||||||||||||||    
T  25717654 ggacaagtcataagttgtttccataagctcttccaaacaatttcacaagtgcttatgtcggtacataagctcaaataagacaatccaaacaagccct 25717750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 11264307 - 11264452
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||| ||| |  |||||||||||||||||| ||  ||||| ||| ||||||||||||||||| ||| ||| ||||| ||||||||  |||    
T  11264307 ttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtctca 11264406  T
Q  185 caagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||  || ||||| |  ||||||  |||||||||||  |||||||||    
T  11264407 cagatgtttatgctagtagatagactcaaataagccaatccaaaca 11264452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 23819096 - 23819189
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||||||||||||||||||||||||| |||||||| ||  |||| |||| |||||||||||||| || ||   ||| |||||||||||||    
T  23819096 tgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactcttccaaacag 23819189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 27123407 - 27123271
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    ||||||||  || |||||||||||||||||| ||  |||| ||||  |||||||||||||||| ||| |||||||||  |||||||  |||||||| |||    
T  27123407 taagctattatggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtactt 27123308  T
Q  194 atgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||| |  |  ||||||||||||||| | |||||||||    
T  27123307 atgctagtttataagctcaaataagttaatccaaaca 27123271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 4191659 - 4191766
Alignment:
Q  21 gcgtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaa-taaagtgaaattgttttcataagctatcttgaagagcttatggaa 119  Q
    ||||||||||||| ||| ||||||| | || ||||| ||| ||| ||||||||| |||||| ||| |||||||||||| |||| || ||||| |||||||    
T  4191659 gcgtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcataagttatcctggagagcgtatggaa 4191758  T
Q  120 ataagctg 127  Q
    ||||||||    
T  4191759 ataagctg 4191766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 47970245 - 47970434
Alignment:
Q  28 tcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||| ||| ||||||| | || ||||| ||| ||| |||||||||| |||| ||| | |||||| |  ||||| || |||||||||| ||||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttcaaattctatcatggagagcttatgcaaataagctg 47970344  T
Q  128 ggaacagcttagggacatgtcataagttgcttcaataagctcttcca-aacagcatcacaagtgcttatgttgatagataagctcaaataa 217  Q
      ||||  ||| ||| |||||| |||| | ||| ||||||| ||||| |||||  ||||||||||||||||   |||||||||||||||||    
T  47970345 aaaacaatttatggaaatgtcacaagtagtttccataagct-ttccataacagtttcacaagtgcttatgtcagtagataagctcaaataa 47970434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 5131364 - 5131254
Alignment:
Q  39 cttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcat----aagctatcttgaagagcttatggaaataagctgggaacag 134  Q
    ||||||| | |||| ||||||| ||| ||||||||||||||| ||| |||||||||    |||||||| || |||||||||||||||||||||  ||||     
T  5131364 cttatgtataagttgtttatataacaaaagataaaataaagttaaaatgttttcatgtaaaagctatcctggagagcttatggaaataagctgaaaacaa 5131265  T
Q  135 cttagggacat 145  Q
    |||| ||||||    
T  5131264 cttatggacat 5131254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 14011241 - 14011389
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||| |||||||||||||| |||||||||||||||||||||  |||||||||  ||||||| ||||  |  ||  ||||||||| ||||| ||  | ||    
T  14011241 tgtttacataagctatcttggagagcttatggaaataagctgaaaacagcttaaagacatgtgataaactctttgcataagctctcccaaatagttttac 14011340  T
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaacaagcc 234  Q
    | ||||||||||   |||||||| ||||| |||   |||||||||||||    
T  14011341 atgtgcttatgtaagtagataagttcaaagaagtaaatccaaacaagcc 14011389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 21043318 - 21043195
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    |||||||| || ||| ||| ||||||||||||||||| |||||||| |||| |||||  |||  ||||||||| | || ||||||||| || ||| ||||    
T  21043318 aagataaattatagttaaactgttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaacgtgtcataagctgtttccataa 21043219  T
Q  166 gctcttccaaacagcatcacaagt 189  Q
     |||| ||||||||  ||||||||    
T  21043218 cctctcccaaacagtctcacaagt 21043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 6979026 - 6978932
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||| |||||| ||| | ||||| ||||| ||||||||||  |||||||||  |||||||||||||||  ||||||||| ||| ||||||||    
T  6979026 ttgtttttataagccatcctaaagagtttatgaaaataagctgaaaacagcttatagacatgtcataagttatttcaataagttctgccaaacag 6978932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 28615530 - 28615664
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgct-tcaataagctcttccaaacagcatca 184  Q
    |||||| ||| ||||||||| |||||||||||||||||| ||  || | || | ||||||||||||||||| | |   |||||||||| ||||||  | |    
T  28615530 tgtttttataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttggtattcttaagctcttcgaaacagtctta 28615629  T
Q  185 caagtgcttatgttgatagataagctcaaataagc 219  Q
    ||| |||||||||   |||||||||||||||||||    
T  28615630 caaatgcttatgtcattagataagctcaaataagc 28615664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 30024620 - 30024694
Alignment:
Q  21 gcgtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    ||||||||||||| ||| ||||||  | |||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  30024620 gcgtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcata 30024694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 3639184 - 3639079
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaag 232  Q
    |||||| |||| ||||||||| || ||| || |||||||||||| |   ||||| |||||||||| | |||||||||||||||||||  ||||||| | |    
T  3639184 agcttatggacttgtcataagctgtttctatcagctcttccaaataatctcacaggtgcttatgtcggtagataagctcaaataagcaaatccaaatatg 3639085  T
Q  233 ccctta 238  Q
    ||||||    
T  3639084 ccctta 3639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 47800630 - 47800671
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  47800630 tgttttcataagctatcttgaagagcttatgaaaataagctg 47800671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 52735128 - 52735169
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  52735128 ttgttttcgtaagctatcttgaagagcttatggaaataagct 52735169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 35743252 - 35743356
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtc 148  Q
    |||||||| ||| ||| ||||||||||||||  ||| |  |||||||| ||||| ||||||| ||||||||||||| ||| |||| ||||   |||||||    
T  35743252 agttatttctataacaaaagataaaataaaggcaaactactttcataaactatcatgaagagtttatggaaataagttggaaacaacttataaacatgtc 35743351  T
Q  149 ataag 153  Q
    |||||    
T  35743352 ataag 35743356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 45128377 - 45128241
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagca 181  Q
    ||||||||||||||| || || |  | |||||||||||||||||||  ||||||| | |||||||  || ||||| ||| |||||||||  ||||||  |    
T  45128377 aaattgttttcataaactgtcctataaagcttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctctctcaaacaata 45128278  T
Q  182 tcacaagtgcttatgttgatagataagctcaaataag 218  Q
    ||||| ||| |||||  | |||||||| |||||||||    
T  45128277 tcacatgtggttatgccggtagataagttcaaataag 45128241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 18628606 - 18628486
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||| ||||||| |||||||||||||||||||||  |||| ||          |||||||||| ||  ||||||||| ||||||||  ||||    
T  18628606 tgttttcataagttatcttggagagcttatggaaataagctgaaaacaact----------tcataagttgttttcataagctctcccaaacagtctcac 18628517  T
Q  186 aagtgcttatgttgatagataagctcaaata 216  Q
    ||||| ||||||   ||||||||||||||||    
T  18628516 aagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 29263376 - 29263467
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaa-taagctcttccaa 175  Q
    |||||||||||||||||| || ||||||| |||||||||||||  |||| |||| | |||| ||||||| || ||||| |||||||| ||||    
T  29263376 ttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataagctgtttcaattaagctctcccaa 29263467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 53673721 - 53673662
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacat 145  Q
    |||||||||||||||||||| |||||||||| ||||||||||  |||| |||| ||||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacat 53673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 6987793 - 6987711
Alignment:
Q  97 gctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||| || |||||||||||||||||| ||  || || ||| |||||||||||||||||  || ||||||||| ||||||||    
T  6987793 gctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacag 6987711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 228
Target Start/End: Original strand, 29375915 - 29376052
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    |||||||| |||| || ||| |||||||||||||| ||  ||||   || |||| ||||||||| || ||| |||||||||   ||| ||| ||||||||    
T  29375915 ttcataagttatcgtggaga-cttatggaaataagttgaaaacaaaatatggacctgtcataagctgtttccataagctctctgaaatagcgtcacaagt 29376013  T
Q  190 gcttatgttgatagataagctcaaataagcttatccaaa 228  Q
    ||||||||  ||||||||| ||||||||||  |||||||    
T  29376014 gcttatgtcaatagataagttcaaataagccaatccaaa 29376052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 30207635 - 30207569
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||||||||||||||| |||  |||| ||||||||||||||||  |||||||||  |||||||||||    
T  30207635 ttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 42121494 - 42121563
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||||||||| |||||||||| ||| ||| |||||||||||| | ||||||||| | ||||||||||||||    
T  42121494 ttgttttcatgagctatcttggagaacttgtggaaataagct-gaaacagcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 29778801 - 29778842
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  29778801 ttgttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 51556014 - 51555886
Alignment:
Q  24 tttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    |||||||||| ||| ||||||| | || ||||  ||| ||| ||||||||||||||| | |||| |||||||| | ||| | ||||||||||   |||||    
T  51556014 tttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtcagattg-tttcataaaccatcctaaagagcttattagaataa 51555916  T
Q  124 gctgggaacagcttagggacatgtcataag 153  Q
    ||||  ||||||||| |||||||| |||||    
T  51555915 gctgaaaacagcttatggacatgttataag 51555886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 4471175 - 4471255
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    |||||||||||||||||||||| ||||| || ||||||| ||   ||| |||| ||| ||||||||||||| ||| |||||    
T  4471175 tgttttcataagctatcttgaaaagcttctgaaaataagttgaatacaacttatggatatgtcataagttgtttctataag 4471255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 8328128 - 8328052
Alignment:
Q  140 ggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaata 216  Q
    ||||||||||||| ||| ||  ||||||| ||||||||||  ||| |||||||||||   |||||||||||||||||    
T  8328128 ggacatgtcataaattgttttcataagctattccaaacagtctcataagtgcttatgccaatagataagctcaaata 8328052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 18011878 - 18011918
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  18011878 tgttttcataagctatcttgaagagtttatgaaaataagct 18011918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 21593043 - 21592979
Alignment:
Q  112 ttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||||||||||||  | |||||||   |||||||||||| |||||||||||||||| |||||    
T  21593043 ttatggaaataagctgaaagcagcttataaacatgtcataagctgcttcaataagctctcccaaa 21592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 24371017 - 24370882
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagg--gacatgtcataagttgcttcaataagctcttccaaacagcat 182  Q
    |||||||||||||||||| | || || |||| |||||||||||  ||| ||||| |   ||||||||||||||| ||| ||||| | |  ||||||   |    
T  24371017 ttgttttcataagctatcctaaatagtttatagaaataagctgaaaacggcttatgtatacatgtcataagttgtttccataagttttatcaaacattct 24370918  T
Q  183 cacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||| |||||||||   |||||||||||||||||||    
T  24370917 cacatgtgcttatgcgaatagataagctcaaataag 24370882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 29126226 - 29126174
Alignment:
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaacaagccctta 238  Q
    |||||||||||  | |||||||||||||||||||  |||||||||||||||||    
T  29126226 aagtgcttatgccggtagataagctcaaataagccaatccaaacaagccctta 29126174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 19250552 - 19250623
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||| ||||| ||||||||||||| |||  ||||||| ||  | ||||||| |||||||||||||||||    
T  19250552 ttgtttttataagttatcttgaagagcatataaaaataagttgaaatcagcttatggacatgtcataagttg 19250623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 19394805 - 19394722
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtg 190  Q
    |||||||||||||||||||||    ||||||| | |||||| |||||||| ||| |||||||||  |||||||  |||||||||    
T  19394805 agagcttatggaaataagctgtattcagcttatgtacatgtaataagttgtttctataagctctggcaaacagtctcacaagtg 19394722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 28300360 - 28300297
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    |||||||| |||||||||||||||||||| ||||||| ||  |||| |||| | ||||||||||    
T  28300360 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 28300297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 30631962 - 30632033
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||| ||||||| ||||| |||| ||||||||||||   ||||||||| | ||||| |||||||||    
T  30631962 ttgttttcatgagctatcatgaagtgcttttggaaataagcttaaaacagcttatgaacatgccataagttg 30632033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 52294071 - 52294036
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctat 101  Q
    ||||||||||||||||||||||||||||||| ||||    
T  52294071 aagataaaataaagtgaaattgttttcataaactat 52294036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 4500836 - 4500894
Alignment:
Q  69 ataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||| ||||| |||||||||||| ||||||| ||| |||| ||||| ||||||||||    
T  4500836 ataaaacaaagttaaattgttttcaaaagctattttggagagattatgaaaataagctg 4500894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 6428043 - 6428157
Alignment:
Q  104 tgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatag 203  Q
    ||||||||||||||||||| |||   | || |||| ||||||||||||||||| ||  |||| ||||  ||||| |  ||||||||||||||    |||     
T  6428043 tgaagagcttatggaaatatgcttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatat 6428142  T
Q  204 ataagctcaaataag 218  Q
    |||||||||||||||    
T  6428143 ataagctcaaataag 6428157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 11158421 - 11158379
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||  ||||||| |||||||||||||    
T  11158421 ttgttttcataagctatcttagagagcttgtggaaataagctg 11158379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 19429694 - 19429768
Alignment:
Q  64 ataagataaaataaagtgaaattgttttcata--agctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||||  || |||||||||| |||  ||||||| || |||||||||||||||||||||  |||||||||    
T  19429694 ataagataaaata--gtcaaattgttttgatataagctatcctggagagcttatggaaataagctgaaaacagctta 19429768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 22684571 - 22684517
Alignment:
Q  99 tatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||||| |||||||    
T  22684571 tatcttgaagagcttaaagaaataagctgaaaacagcttatggacatatcataag 22684517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 29467666 - 29467620
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||| ||||||||||||||||  ||||||||| ||||||||||||||    
T  29467666 agagtttatggaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 49219145 - 49219187
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||    
T  49219145 ttgttttcataaactatcttaaagagattatggaaataagctg 49219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 50800092 - 50800023
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||| ||||||||| || ||| ||| |||||||||||||  |||||||||  ||||||||||||||||    
T  50800092 tgttttcttaagctatcatggagaactt-tggaaataagctgaaaacagcttatagacatgtcataagttg 50800023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 2111114 - 2111073
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  2111114 ttgttttcataagctatcttgaaggacttatgaaaataagct 2111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 2874684 - 2874607
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    ||||||||||||||  | || |||||||||||||||| |  || || ||| ||||||||||||||||| ||| |||||    
T  2874684 tttcataagctatccaggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgtttccataag 2874607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 7730626 - 7730663
Alignment:
Q  81 gaaattgttttcataagctatcttgaagagcttatgga 118  Q
    |||||||||||||||||||||| || ||||||||||||    
T  7730626 gaaattgttttcataagctatcctggagagcttatgga 7730663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 11262831 - 11262794
Alignment:
Q  81 gaaattgttttcataagctatcttgaagagcttatgga 118  Q
    |||||||||||||||||||||| || ||||||||||||    
T  11262831 gaaattgttttcataagctatcctggagagcttatgga 11262794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 17822929 - 17822888
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||||||| ||| |||||| |||||||||    
T  17822929 ttgttttcataagctatcttggagaacttatgaaaataagct 17822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 28232555 - 28232680
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaag 188  Q
    ||||| |||||| |||  ||||||| |||||||||| ||  |||| ||||   | | ||||||||||| ||| | ||||||||||||||||  || ||||    
T  28232555 tttcagaagctaccttcgagagcttgtggaaataagatgaaaacaacttataaataagtcataagttgtttccacaagctcttccaaacagtctcgcaag 28232654  T
Q  189 tgcttatgttgatagataagctcaaa 214  Q
    |||| ||||  ||||||||| |||||    
T  28232655 tgctcatgtcaatagataagttcaaa 28232680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 55547107 - 55547038
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    ||||||||||||||||  |||| || |||||||||||||||   |||| ||||  |||||||||||||||    
T  55547107 tgttttcataagctatgctgaaaagtttatggaaataagctaaaaacaacttatagacatgtcataagtt 55547038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 2592365 - 2592281
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgctt-caataagctcttccaaa 176  Q
    ||||||||| ||| |||||||||||||||||||||  |||| ||||  ||||  | |||||||| || ||||||||||| |||||    
T  2592365 ataagctattttggagagcttatggaaataagctgaaaacaacttacagacacattataagttgtttccaataagctctcccaaa 2592281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 2838292 - 2838363
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||||||||||||||||  || | ||||  ||||||||||||| | |||| |||||||||| |||||||    
T  2838292 agagcttatggaaataagctga-aataacttattgacatgtcataagatacttccataagctcttgcaaacag 2838363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 7694073 - 7694009
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 150  Q
    |||||||||||| |||| || |||| ||||||||||||||||  |||| |||| | |||||||||    
T  7694073 tgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 17975432 - 17975392
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||| ||||||||||||| ||||||| ||||||||||||    
T  17975432 tgtttttataagctatcttggagagcttctggaaataagct 17975392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 25487544 - 25487488
Alignment:
Q  162 ataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||||||||||   | ||||||||||||| | |||||||| ||||||||||    
T  25487544 ataagctcttccaaacaatcttacaagtgcttatgctaatagataaactcaaataag 25487488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 25896845 - 25896949
Alignment:
Q  140 ggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttag 239  Q
    |||||||||||||| |  ||| ||||||||| | ||||||  ||||||||||| ||| |  ||||||| ||||||||||   ||||||| | ||| ||||    
T  25896845 ggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaatatgccattag 25896944  T
Q  240 ttaaa 244  Q
    |||||    
T  25896945 ttaaa 25896949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 27721724 - 27721792
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagt 154  Q
    |||||||||||| |||| || |||||||  | ||||||||||  ||||||||| ||| |||||||||||    
T  27721724 tgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatggatatgtcataagt 27721792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 28615340 - 28615380
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagc 125  Q
    |||||||||||||||||  ||||||||||||| ||||||||    
T  28615340 ttgttttcataagctataatgaagagcttatgaaaataagc 28615380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 41097272 - 41097212
Alignment:
Q  133 agcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    |||||| ||||||||||| ||||| ||| ||||||||| || |||||  ||||||||||||    
T  41097272 agcttatggacatgtcattagttgtttctataagctctcccgaacagtctcacaagtgctt 41097212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 46860001 - 46860057
Alignment:
Q  162 ataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||  |||||||  ||||||||||||||||  ||||||||| |||||||||    
T  46860001 ataagctctctcaaacagtttcacaagtgcttatgtgaatagataagttcaaataag 46860057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 51044578 - 51044506
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaa-ttgttttcataagctatcttgaagagcttatggaaataa 123  Q
    ||||| ||| ||| ||||||||||||||| ||| |||||||||||||||||| |  ||| |||||| ||||||    
T  51044578 tatttctataacaaaagataaaataaagtcaaacttgttttcataagctatcctagagaacttatgaaaataa 51044506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 52169986 - 52169930
Alignment:
Q  183 cacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttag 239  Q
    |||||||||||||||  |||||||| ||||||||||   ||||||||||| ||||||    
T  52169986 cacaagtgcttatgtaaatagataaactcaaataagtcaatccaaacaagtccttag 52169930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 23373395 - 23373267
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataa 165  Q
    ||||||||||||||| ||  ||||||||||||||||| |||||||||||  |||||||||||  |||||  |  ||||||||||||||||| ||| ||||    
T  23373395 aagataaaataaagtcaatctgttttcataagctatcctgaagagcttacagaaataagctgaaaacag-atgtggacatgtcataagttgtttctataa 23373297  T
Q  166 gctcttccaaacagcatcacaagtgcttat 195  Q
    ||||| |||||||   ||||||||||||||    
T  23373296 gctctcccaaacaatctcacaagtgcttat 23373267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 230
Target Start/End: Complemental strand, 32515500 - 32515360
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||||||||| || ||||||||| || ||||| ||  |||| ||||  ||||||||||| | || ||| ||||||||| ||||||||  ||||||||    
T  32515500 ttcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagt 32515401  T
Q  190 gcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    |||||||||  ||||||| |||||||| ||| |||||||||    
T  32515400 gcttatgttagtagataaactcaaatatgctaatccaaaca 32515360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 15581285 - 15581395
Alignment:
Q  110 gcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagc 209  Q
    |||||| |||||| ||||  |||||||||  |||||||||||||||| ||| || ||||||||||||||   ||||||||||||||||   |||||||||    
T  15581285 gcttatagaaataggctgaaaacagcttatagacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataagc 15581384  T
Q  210 tcaaataagct 220  Q
    | |||||||||    
T  15581385 taaaataagct 15581395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 236
Target Start/End: Original strand, 6976886 - 6977081
Alignment:
Q  39 cttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    ||||||| | || ||||| ||| ||| ||||||| ||||||| ||| | ||||||||||||   |||| ||| ||||||||||||| |   |||||||||    
T  6976886 cttatgtataagatatttctataacaaaagataagataaagttaaactattttcataagcttatttga-gagtttatggaaataagttaa-aacagctta 6976983  T
Q  139 gggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccct 236  Q
     | ||||||||||||||| ||| || ||||||  |||||||| |||||||| || ||| | ||| |||||||||||||| || || |||||| |||||    
T  6976984 tgaacatgtcataagttgtttccattagctctcgcaaacagcctcacaagttctcatgctaataaataagctcaaataatctaattcaaacatgccct 6977081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 29834985 - 29834888
Alignment:
Q  69 ataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    |||||||||||| ||||||||||||||||||||| || |||||||||||||||||  ||  || |||||| ||||| ||| ||||||| ||| |||||    
T  29834985 ataaaataaagtcaaattgttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgtttctataag 29834888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 31517799 - 31517670
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||| || ||||| |||||||||| ||||||||||  ||||||||| | ||||||||| ||||| ||  ||||| ||| ||||||||  ||||||||    
T  31517799 ttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagt 31517700  T
Q  190 gcttatgttgatagataagctcaaataagc 219  Q
    |||||||    || ||||||||||||||||    
T  31517699 gcttatgccagtaaataagctcaaataagc 31517670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 4202279 - 4202147
Alignment:
Q  21 gcgtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaa 120  Q
    ||||||||||||| ||| |||| || | |||||||| ||| ||| ||||||||  ||||| ||  |||||||| ||||||||| | |||||||| | |||    
T  4202279 gcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaagctgttttcaaaagctatctggcagagcttacgaaaa 4202180  T
Q  121 taagctgggaacagcttagggacatgtcataag 153  Q
    |||||||  || |||||| ||||||||||||||    
T  4202179 taagctgaaaatagcttatggacatgtcataag 4202147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 37593744 - 37593677
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||||||||| |||||||||||||| ||||||||||  ||||||||| | |||||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttg 37593677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 218
Target Start/End: Complemental strand, 10199469 - 10199339
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||||||| ||  |||||||||| ||||||||||  |||| |||| | |||||||||||| |  ||  || || ||| ||||| ||  ||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaa 10199370  T
Q  188 gtgcttatgttgatagataagctcaaataag 218  Q
    |||||||||||  ||||||||||||||||||    
T  10199369 gtgcttatgttagtagataagctcaaataag 10199339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 15579497 - 15579582
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    ||||||||| ||  ||| |||||||||||||||| ||||| |||| ||||||||||||||||| ||| | ||||||| ||||||||    
T  15579497 taagctatcatgttgagtttatggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaacag 15579582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 44032060 - 44031952
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    ||||| |||| ||||||||||||||||||||||| |||||  || |||||| ||||||||||| || |||||  ||||||||| | | ||||  | ||||    
T  44032060 ttttcttaagttatcttgaagagcttatggaaattagctgaaaatagcttatggacatgtcattagctgcttacataagctctcctagacagtctaacaa 44031961  T
Q  188 gtgcttatg 196  Q
    |||||||||    
T  44031960 gtgcttatg 44031952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 45205074 - 45205145
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||||||||||| || |||| | ||||||||||||||  |||| ||||||||||| ||||||||||    
T  45205074 ttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggacatatcataagttg 45205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 48748730 - 48748628
Alignment:
Q  23 gtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaata 122  Q
    |||||||||||  || ||||||| | || ||||| ||| ||| ||||| ||||||||| |||||||||||||||||||||||| | || |||||| ||||    
T  48748730 gtttatcatatatgtgcttatgtataagctatttctat-acaaaagatgaaataaagttaaattgttttcataagctatcttggacagtttatggtaata 48748632  T
Q  123 agct 126  Q
    ||||    
T  48748631 agct 48748628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 14737827 - 14737773
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcataagctatct 103  Q
    |||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  14737827 agttatttctataacaaaagataaaataaagtcaaattgttttcataagctatct 14737773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 43420267 - 43420409
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||||||||| |||||| || |||||||||| ||  | | | ||| | |||||||||||| || ||| ||||| |||  ||| |||  ||||||    
T  43420267 ttttcataagctatctggaagagattttggaaataagttgaaagcggattatgaacatgtcataagctgtttccataagatctcacaagcagtctcacaa 43420366  T
Q  188 gtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    ||| ||||||   |||||||||||||||||||| |||| ||||    
T  43420367 gtgtttatgtctgtagataagctcaaataagctaatcctaaca 43420409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 12564563 - 12564430
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||||||||||||||| ||| |||||||||||||||||  |||| ||||  ||| ||||||||| |   |   |||||||| ||||||||   ||    
T  12564563 ttgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataagctatatacgtaagctctcccaaacagtcaca 12564464  T
Q  185 caagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||| |   || |||||||||||||||    
T  12564463 caagtgcttatatcagtatataagctcaaataag 12564430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 50319230 - 50319311
Alignment:
Q  39 cttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaa 120  Q
    ||||||| | || ||||| ||| ||| ||||||||||||||| || |||||||||||||||||| |  ||||||||||||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcataagctatcctagagagcttatggaaa 50319311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 4622100 - 4622232
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||| |||| ||||||||| ||||||| || |||||||||   ||||||||| |||||||||||||| || | | || || ||||||||||||  | ||    
T  4622100 tgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgttcccattagatcttccaaacagtctaac 4622199  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    |||| |||||||   ||| |||||| |||||||    
T  4622200 aagttcttatgtcattagttaagcttaaataag 4622232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 4868407 - 4868554
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||| ||| |||| ||||| |||||||| ||||||| ||  |||| ||||  |||||||||||||||| ||| |||| ||||  |||||||  ||||    
T  4868407 tgttttcgtaaactattttgaaaagcttatgtaaataagttgaaaacaacttattgacatgtcataagttgtttc-ataaactctctcaaacagtctcac 4868505  T
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaacaagcc 234  Q
    |||||| |||||  ||||||||  ||||||||    |||||||||||||    
T  4868506 aagtgcctatgtcaatagataaattcaaataaatcaatccaaacaagcc 4868554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 27140485 - 27140617
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||| |||||||||| || |||||||||| ||||||||||  |||| |||| |||||||||||||| || |||  ||| ||||  |||| ||  | ||    
T  27140485 tgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaagagacttac 27140584  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    || || ||||||  ||||||||||||| |||||    
T  27140585 aattgtttatgtcaatagataagctcatataag 27140617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 38867894 - 38867785
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||||||| ||||||||||| |||||| |||||||||   |||| || | |||||| |||||||||  ||| |||||||||  |||||||  ||||    
T  38867894 tgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagttatttccataagctctctcaaacag--tcac 38867797  T
Q  186 aagtgcttatgt 197  Q
    ||||| ||||||    
T  38867796 aagtgtttatgt 38867785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 3597347 - 3597212
Alignment:
Q  83 aattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcat 182  Q
    ||||||||  ||||||||||  ||| || ||||||||||||||||  || |||||| || |||||||||||||  ||  || | |||||||||||||  |    
T  3597347 aattgtttatataagctatcacgaacagtttatggaaataagctgaaaatagcttatggccatgtcataagttatttttatcaactcttccaaacagtct 3597248  T
Q  183 cacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||||| |||| |   ||||||| ||||||||||    
T  3597247 cacaagtggttatatcattagataacctcaaataag 3597212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 5047155 - 5047194
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctg 5047194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 6292502 - 6292644
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    ||||| ||| |||| ||| |||||||||| ||||||||||  ||||||||| | |||||||||||| || || || ||  ||| |||||||   ||| ||    
T  6292502 ttttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttttaa-aaattctcccaaacaatctcaaaa 6292600  T
Q  188 gtgcttatgttgatagataagctcaaataagcttatccaaacaa 231  Q
    ||||||||||   ||||||||||||||||||   ||||||||||    
T  6292601 gtgcttatgtcagtagataagctcaaataagtcaatccaaacaa 6292644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 34290243 - 34290310
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||||||||| |||||| ||||||||||  |||| |||| | | ||||||||||    
T  34290243 tgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 38651557 - 38651454
Alignment:
Q  23 gtttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaata 122  Q
    ||||||||| | ||| ||||||| | || || || ||| ||| |||||||| ||||||  |||||||||||||||||||| || |||||||||  |||||    
T  38651557 gtttatcatgtaagtgcttatgtataagctaattctataacaaaagataaactaaagtcgaattgttttcataagctatcctggagagcttataaaaata 38651458  T
Q  123 agct 126  Q
    ||||    
T  38651457 agct 38651454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 43332491 - 43332558
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||||||||||||||||||  ||||||||||  ||||| ||||  ||| ||||||||    
T  43332491 tgttttcataagctatcttgaagagcttattaaaataagctgaaaacaggttagaaacaggtcataag 43332558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 6279408 - 6279538
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    ||||||||||||||| |  |||||||||||||||| ||||  |||| |||| ||||||||  | |  || ||| |||||||||  ||||||||  |||||    
T  6279408 ttttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgtggttaactgtttccataagctctctcaaacagccacacaa 6279507  T
Q  188 gtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||   ||| |||||| |||||||    
T  6279508 gtgcttatgtcagtagttaagctgaaataag 6279538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 7262579 - 7262497
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct 170  Q
    ||||||||||||||| |||||||||| |||||||||| ||  ||||||||| | |||||||| ||| || ||  |||||||||    
T  7262579 ttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctct 7262497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 28935930 - 28935832
Alignment:
Q  95 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    |||||||| |||||||||||||||||||||||   || | |||| |||||||||||||  ||  || ||||||||| ||||||||  |||||| |||||    
T  28935930 aagctatcctgaagagcttatggaaataagctaaaaaaaacttatggacatgtcataaactgactctataagctctcccaaacagtctcacaaatgctt 28935832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 46499959 - 46499870
Alignment:
Q  66 aagataaaataaagtgaaattgttttcat--aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||||| |||||||||| ||  ||||| || || |||||||||| ||||||| |   ||||| ||||||||||||||||||    
T  46499959 aagataaaataaagtcaaattgtttttatttaagctttcatggagagcttatgaaaataaggttaaaacagtttagggacatgtcataag 46499870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 12564938 - 12564877
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatg 146  Q
    ||||||||||||||||||||  || ||||| ||||||||||||  ||||||||| |||||||    
T  12564938 ttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 16322856 - 16322949
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||||| ||||| ||||||||||||||||||||||||   |||| |||| |  |||| ||||||||| ||| |||| |||| | ||||||    
T  16322856 tgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatgtgcatgacataagttgtttcgataatctctccaaaacag 16322949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 21002244 - 21002313
Alignment:
Q  168 tcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccctt 237  Q
    ||||||||||||  |||||||| ||||||    |||||||||||||||||||  ||||||||||||||||    
T  21002244 tcttccaaacagtctcacaagttcttatgcaagtagataagctcaaataagccaatccaaacaagccctt 21002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 30259540 - 30259455
Alignment:
Q  95 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagc 180  Q
    |||||||| || |||||||||||||||||| ||  ||||  |||  |||||||| ||||||| ||| |||||||||| ||||||||    
T  30259540 aagctatcatggagagcttatggaaataagttgaaaacaatttattgacatgtcgtaagttgtttctataagctctttcaaacagc 30259455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 35350643 - 35350717
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctggg----aacagcttagggacatgtcataagttg 156  Q
    ||||||||||||||||| | ||||||||||| ||||||||| |     ||||||||| |||||||||||||||||    
T  35350643 tgttttcataagctatcctaaagagcttatgtaaataagctagctgaaaacagcttatggacatgtcataagttg 35350717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 37842419 - 37842354
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 150  Q
    ||||||||||||||||||||||||| |||||  ||||||||||  ||| ||||| | |||||||||    
T  37842419 ttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcat 37842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 37942026 - 37941941
Alignment:
Q  108 gagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    ||||||| | |||||||| | ||||| |||| ||||||||||||| ||| ||| |||||||||  |||||||| | ||||||||||    
T  37942026 gagcttaagaaaataagccgagaacaacttatggacatgtcataaattgtttctataagctctctcaaacagcgttacaagtgctt 37941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 24460471 - 24460403
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||| |  ||||||||   ||||||||||| ||||||||| | ||||||||||||    
T  24460471 ttgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataag 24460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 230
Target Start/End: Complemental strand, 26462000 - 26461860
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagt 189  Q
    ||||||||||||| || |||||||||| ||||||||||  |||| |  | ||||||| |||| |||| ||  ||||||||| |||||||| || | ||||    
T  26462000 ttcataagctatcctgcagagcttatgaaaataagctgaaaacaacccatggacatgccatatgttgttttcataagctctgccaaacagtataaaaagt 26461901  T
Q  190 gcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    |||| ||   ||||||| ||||| |||| |  |||||||||    
T  26461900 gcttgtgccaatagatatgctcatataaaccaatccaaaca 26461860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 28689508 - 28689448
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    ||||||||||||| | |||||||| ||||||||||  |||| |||| ||||||||||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataag 28689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 33723445 - 33723313
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||| | || | |||||||||||||||||||  |||| || | | ||||||||| || || ||| ||||| | | |||| |||  ||||    
T  33723445 tgttttcataagctaccctgtaaagcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcac 33723346  T
Q  186 aagtgcttatgttgatagataagctcaaataag 218  Q
    ||||| ||||| |  |||||||| |||||||||    
T  33723345 aagtgtttatggtagtagataagttcaaataag 33723313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 35080130 - 35080043
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaa 176  Q
    ||||||| ||||||| || ||||||| | ||||||||||   ||||||||| | ||||||||||||||| ||| ||||||| |||||||    
T  35080130 ttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagttg-ttccataagcttttccaaa 35080043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 35925696 - 35925764
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||| ||||||||||| || |||| ||||||||||||| ||  ||||||||| | ||||||||||||    
T  35925696 ttgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataag 35925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 46252739 - 46252675
Alignment:
Q  92 cataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||||||| |||||||||| |||||| |||  |||| |||| | |||||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttg 46252675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 47020515 - 47020579
Alignment:
Q  87 gttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 151  Q
    ||||||||||||||||||  |||||||| ||||||||| ||  ||||| ||| ||||||||||||    
T  47020515 gttttcataagctatcttagagagcttacggaaataagttgtaaacaggttatggacatgtcata 47020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 3224430 - 3224561
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||| |||||||||  |  ||| |||||| |||||||||| ||||| |||| ||||||||||||||| | ||  ||||  |||  |||| ||  ||||    
T  3224430 tgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatgtcataagtagtttgtataaattctctcaaatagtgtcac 3224529  T
Q  186 aagtgcttatgttgatagataagctcaaataa 217  Q
    |||||||||||| | || |||| |||||||||    
T  3224530 aagtgcttatgtcggtaaataaactcaaataa 3224561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 4549549 - 4549462
Alignment:
Q  141 gacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaa 228  Q
    |||||||||||||||| ||| ||||||||| ||||||||  ||| || ||||||||    ||||||| |||||||||||  |||||||    
T  4549549 gacatgtcataagttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 5150943 - 5150982
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  5150943 ttgttttcataagctatcatgaagagcttatagaaataag 5150982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 12477348 - 12477277
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgctt 159  Q
    |||| |||||||||| || ||||  |||||||||||||||  |||| |||| |||||||||||||| |||||    
T  12477348 ttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacatgtcataagctgctt 12477277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 26184759 - 26184822
Alignment:
Q  90 ttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||  |||| || ||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  26184759 ttcataaattatcctggagagcttatggaaataatctgaaaacagcttatggacatgtcataag 26184822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 26779989 - 26779950
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataag 124  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  26779989 ttgttttcataagctatcttgaagaacttatgaaaataag 26779950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 29723522 - 29723625
Alignment:
Q  112 ttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctc 211  Q
    ||||| ||||||| ||  ||||| ||| |||||||||||||| || ||| || || |||| ||||| | |||||||||||||||| |  || ||||||||    
T  29723522 ttatgtaaataagttgaaaacagtttatggacatgtcataagctgtttccattagttctttcaaactgtatcacaagtgcttatgctagtaaataagctc 29723621  T
Q  212 aaat 215  Q
    ||||    
T  29723622 aaat 29723625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 30257689 - 30257756
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||||||| ||||| || || |||||| |||||||||||  ||||||||| | |||||||||||    
T  30257689 ttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 32548695 - 32548656
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  32548695 ttgttttcataagctatcttggggagcttatggaaataag 32548656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 40485780 - 40485725
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    |||||||||||| || ||||||||| ||| ||||||||  ||||||||||||||||    
T  40485780 acatgtcataagatgtttcaataagttctcccaaacagtctcacaagtgcttatgt 40485725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 51695558 - 51695455
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggac-atgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||||||| |||  ||||| ||||||||||  || |||||| | || |||| |||||||| ||  ||||| ||||||||||||  |||    
T  51695558 tgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttcttccaaacagtctca 51695459  T
Q  185 caag 188  Q
    ||||    
T  51695458 caag 51695455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 6231879 - 6231809
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||| ||||||| | |||||| ||||| |||||||||||  ||||| ||| ||||||||||| |||||    
T  6231879 tgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcattagttg 6231809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 11893653 - 11893615
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  11893653 tttcataagctattttgaagagtttatggaaataagctg 11893615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 17628635 - 17628689
Alignment:
Q  115 tggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctc 169  Q
    |||||||| ||||  ||||||||| ||||||||||||||||| ||| ||||||||    
T  17628635 tggaaatatgctgaaaacagcttatggacatgtcataagttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 32182277 - 32182319
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||| || ||||||||||||||||| ||||||||||||    
T  32182277 ttgttttcaaaatctatcttgaagagcttaaggaaataagctg 32182319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 35017583 - 35017649
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||||||||| || || |||||||||||||||||| ||  || | |||| |||||||||||||    
T  35017583 tgttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 35590952 - 35590914
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||| || |||||||||||||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagctg 35590914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 42169664 - 42169587
Alignment:
Q  49 agttatttatatgacataagataaaataaagtg--aaattgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||| ||| ||| |||||||||||||||   || || |||||||||||||||||| |||||||| | |||||||    
T  42169664 agttatttctataacagaagataaaataaagtcgtaagtttttttcataagctatcttggagagcttacgaaaataag 42169587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 219615 - 219562
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||| |||||||| || |||||||||||||||||| |||||  |||||||||    
T  219615 ttgtttacataagctgtcctgaagagcttatggaaatgagctgaaaacagctta 219562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 2832075 - 2832120
Alignment:
Q  182 tcacaagtgcttatgttgatagataagctcaaataagcttatccaa 227  Q
    ||||||||||||||| |  |||||||||||||||||||| ||||||    
T  2832075 tcacaagtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 7137061 - 7137020
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||| ||| |||||| ||||||||||    
T  7137061 tgttttcataagctatcttggagaacttatgaaaataagctg 7137020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 7472318 - 7472359
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||| |||||||||||||| |||||||||| ||||||||||    
T  7472318 tgtttccataagctatcttggagagcttatgaaaataagctg 7472359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 11639458 - 11639393
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttc 172  Q
    |||||||||| |||||||||   ||||||||| |||||||||||||| || ||  |||||||||||    
T  11639458 agagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataagctcttc 11639393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 18327152 - 18327067
Alignment:
Q  143 catgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaa 228  Q
    |||||||||||||| ||  ||||| ||||||||| ||  ||| |||||||||||    |||||||||||||||||||  |||||||    
T  18327152 catgtcataagttgttttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaa 18327067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 21254810 - 21254769
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||| |||||||||||| |||||||||| ||||||||||    
T  21254810 tgttttcttaagctatcttggagagcttatgaaaataagctg 21254769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 28077152 - 28077091
Alignment:
Q  66 aagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||| ||| | ||| |||||||||||||||| ||  ||||||||| |||||||||||    
T  28077152 aagataaaagaaaatcaaactgttttcataagctattttagagagcttattgaaataagctg 28077091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 39348031 - 39347970
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatg 146  Q
    |||||||||||| ||||| || | |||||||||||||||||||  |||| |||| |||||||    
T  39348031 ttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacatg 39347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 44422708 - 44422773
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||| |||||||||| || |||||||||| ||||||||||    ||||||| ||||||||||||||    
T  44422708 tttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataag 44422773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 49365817 - 49365788
Alignment:
Q  93 ataagctatcttgaagagcttatggaaata 122  Q
    ||||||||||||||||||||||||||||||    
T  49365817 ataagctatcttgaagagcttatggaaata 49365788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 49517018 - 49517063
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcat 94  Q
    |||||||| ||| ||| ||||||||||||||| |||||||||||||    
T  49517018 agttatttctataacaaaagataaaataaagtcaaattgttttcat 49517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 3924630 - 3924670
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagc 125  Q
    ||||||| |||||||||| ||||||| ||||||||||||||    
T  3924630 ttgtttttataagctatcctgaagagtttatggaaataagc 3924670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 4699676 - 4699608
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    ||||||||| |||||  | ||||||||| ||||||||||   ||||||||| | |||||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttg 4699608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 4757401 - 4757477
Alignment:
Q  142 acatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataag 218  Q
    ||||||||||||||| ||  ||||| ||| |||||  |  ||||||||| ||||||  |||||||||||||||||||    
T  4757401 acatgtcataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataag 4757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 9507314 - 9507390
Alignment:
Q  162 ataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagcttatccaaacaagccctta 238  Q
    ||||||||| ||||||||  |||||| ||| |||| |  |||||||||||||||||||  || |||| |||||||||    
T  9507314 ataagctctcccaaacagtctcacaaatgcctatgctagtagataagctcaaataagcaaattcaaataagccctta 9507390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 10439705 - 10439825
Alignment:
Q  98 ctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    ||||| || |||| ||||||||||||||||  | ||| ||| ||||||||||||  ||| ||  ||||||||| ||||| ||  |||||||  ||||||     
T  10439705 ctatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaatagtctcacaagatcttatgg 10439804  T
Q  198 tgatagataagctcaaataag 218  Q
      ||| |||||||||||||||    
T  10439805 ccataaataagctcaaataag 10439825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 11639560 - 11639491
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataa 96  Q
    ||||||| | ||||||||||||| || ||||| ||||||  |||||||||||||   |||||||||||||||    
T  11639560 ttatcatgtaagtccttatgtgtaagctatttttatgac--aagataaaataaaaccaaattgttttcataa 11639491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 26293207 - 26293175
Alignment:
Q  70 taaaataaagtgaaattgttttcataagctatc 102  Q
    ||||||||||| |||||||||||||||||||||    
T  26293207 taaaataaagtcaaattgttttcataagctatc 26293175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 27963434 - 27963366
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||||  || |||||||||  |||||||||   |||| |||| ||||||||||||||    
T  27963434 ttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 27963366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 31118049 - 31118117
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataag 153  Q
    |||||||||||||||| | ||| || |||||||||||||||||  |||| || | | ||||||||||||    
T  31118049 ttgttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacatgtcataag 31118117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 44928210 - 44928118
Alignment:
Q  130 aacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataagctta 222  Q
    |||| |||| || |||||||||||||| ||| ||||| |||||||||||   | ||||||||||||  |  || |||||||||||| ||||||    
T  44928210 aacaacttacgggcatgtcataagttgtttctataagttcttccaaacaatcttacaagtgcttatactagtaaataagctcaaattagctta 44928118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 45975697 - 45975749
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagctta 138  Q
    |||||||||||||||||||| |||  ||||| ||||||||||  |||||||||    
T  45975697 tgttttcataagctatcttggagaatttatgaaaataagctgaaaacagctta 45975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 49173397 - 49173429
Alignment:
Q  83 aattgttttcataagctatcttgaagagcttat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  49173397 aattgttttcataagctaccttgaagagcttat 49173429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 178
Target Start/End: Original strand, 7244625 - 7244779
Alignment:
Q  24 tttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataa 123  Q
    |||||||||| ||| ||||||| | || ||||| |||  || ||||||||| ||||| ||| |||||||||||||||| ||| |||||||||| ||||||    
T  7244625 tttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcataagctatattggagagcttatgaaaataa 7244724  T
Q  124 gctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaaca 178  Q
    ||||  |||| |||| |  |||||||||| ||| ||| || ||||||| ||||||    
T  7244725 gctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaaca 7244779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 33894642 - 33894786
Alignment:
Q  94 taagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgctt 193  Q
    ||||||||| || | || |||| |||||||||||  |||| |||| |||||||||||| | || ||  |||||||||  |||||||  ||||||||||||    
T  33894642 taagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgctt 33894741  T
Q  194 atgttgatagataagctcaaataagcttatccaaacaagccctta 238  Q
    ||||   | |||||||||||||||||| ||||||||| |||||||    
T  33894742 atgtcatttgataagctcaaataagctaatccaaacatgccctta 33894786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 48157184 - 48157032
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    ||||||||| |||||||   | ||| |||||||||||||||||  ||||||||| ||||||| ||||||||| ||| ||||||||| ||||||||  |||    
T  48157184 ttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaacagtctca 48157085  T
Q  185 caagtgcttatgttgatagataagctcaaataag-ctt-atccaaacaagccc 235  Q
    ||| ||||||  |   || ||||||||||||||| ||| ||||||||||||||    
T  48157084 caaatgcttaaatcagtaaataagctcaaataagtcttaatccaaacaagccc 48157032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 46104631 - 46104498
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||||||||||||  ||||||||||||| ||||||||||| ||||  |||  |||||||||| ||||| ||  |||| || | |||||||  ||||    
T  46104631 ttgttttcataagctatgctgaagagcttatgaaaataagctggaaacattttattgacatgtcatgagttgttttcataatctttcccaaacaatatca 46104532  T
Q  185 caagtgcttatgttgatagataagctcaaataag 218  Q
    |||| | |||||  | ||||||||||||||||||    
T  46104531 caagagtttatgacggtagataagctcaaataag 46104498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 4966163 - 4966266
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||| ||| |||||||||||||||||||| |||  |||| |||| |||||| |||||||| | ||| ||||||||| | ||||||  ||||    
T  4966163 tgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctcctaaacagtctcac 4966262  T
Q  186 aagt 189  Q
    ||||    
T  4966263 aagt 4966266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 12234931 - 12234820
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagata 206  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||||| ||| ||||||| |||||| |||  ||||| ||||| |||    ||||||    
T  12234931 agagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagctattccaagcagtctcacacgtgctaatgccagtagata 12234832  T
Q  207 agctcaaataag 218  Q
    ||||||| ||||    
T  12234831 agctcaactaag 12234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 44151544 - 44151477
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataa 152  Q
    |||||||||||| |||||||||| |||||||||||||||||||  |||| |||| |||||||||||||    
T  44151544 ttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 44808183 - 44808309
Alignment:
Q  104 tgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatag 203  Q
    ||||| ||||||| ||||||||||  ||||| ||| ||||||||||||||||  ||  ||||| |||  |||||||  | |||| |||||||| | |||     
T  44808183 tgaagggcttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtctgacaactgcttatgctaataa 44808282  T
Q  204 ataagctcaaataagcttatccaaaca 230  Q
    ||||||||||||||| |||||||||||    
T  44808283 ataagctcaaataaggttatccaaaca 44808309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 33646023 - 33645894
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctct-tccaaacagcatca 184  Q
    |||||||||||||||||| || |||||||||||||||| ||   |||| ||||  |||||||||||||||| ||| ||||||||| ||||| |||  |||    
T  33646023 tgttttcataagctatctgga-gagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctctccaaccagtctca 33645925  T
Q  185 caagtgcttatgttgatagataagctcaaat 215  Q
    |||||  ||| ||  |||||||| |||||||    
T  33645924 caagtttttacgtcaatagataaactcaaat 33645894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 24363665 - 24363601
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtca 149  Q
    |||||||||||||||||| || |||| ||||||||||||||||  |||| |||| ||||||||||    
T  24363665 ttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 48917410 - 48917362
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaaca 133  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  48917410 ttgttttcataagctatcttggagagcttatgaaaataagctggaaaca 48917362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 12792559 - 12792520
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  12792559 ttttcataagctatcttgaagagcttattgaaataagctg 12792520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 12792624 - 12792585
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  12792624 ttttcataagctatcttgaagagcttatgaaaataagctg 12792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 12792685 - 12792646
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12792685 ttttcataagctatcttgaagagcatatggaaataagctg 12792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 27626183 - 27626104
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagct 168  Q
    |||| ||||||||| ||||||||||||||||||||| |   ||||| ||| |||||||||||||| || ||| |||||||    
T  27626183 tttcctaagctatcatgaagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataagct 27626104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 39551588 - 39551526
Alignment:
Q  109 agcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctctt 171  Q
    |||||||||||||||||||  |||| |||| ||||||||||||||||| ||| |||| |||||    
T  39551588 agcttatggaaataagctgacaacaccttatggacatgtcataagttgtttccataacctctt 39551526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 44241865 - 44241907
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  44241865 ttgttttcataagctatcttgaatagcttatagaaataagctg 44241907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 529382 - 529451
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||||||||||||||||||| |||||||||| ||||| | ||  ||||||||| | || |||||||||||    
T  529382 tgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagtt 529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 22551484 - 22551427
Alignment:
Q  70 taaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||| ||||| ||||||||||  |||||| |||||||||| ||||||||||    
T  22551484 taaaataaagtcaaattcttttcataagtaatcttggagagcttatgtaaataagctg 22551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 39334200 - 39334293
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||| |||||||| ||  ||||||||||||||||||||    || |||| ||||||||||||| ||| ||| |||| |||| ||||||||    
T  39334200 tgttttcaaaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataaactctaccaaacag 39334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 45859587 - 45859479
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    ||||||||  ||||| |||||||||||| |||||||||||  |||| || | | |||||||||| |||| |||  |||||||||||||||||  ||||||    
T  45859587 ttttcatagactatcatgaagagcttatagaaataagctgaaaacaact-atgaacatgtcatatgttgtttccgtaagctcttccaaacagtctcacaa 45859489  T
Q  188 gtgcttatgt 197  Q
    | || |||||    
T  45859488 gagcctatgt 45859479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 46086453 - 46086494
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  46086453 ttgttttcataggctatcttgaagagtttatggaaataagct 46086494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 5018025 - 5017962
Alignment:
Q  66 aagataaaataaagtgaaattgttttc--ataagctatcttgaagagcttatggaaataagctg 127  Q
    ||||||||||||||| |||||  | ||  ||||||||||||||| |||||||||||||||||||    
T  5018025 aagataaaataaagtcaaattactctcttataagctatcttgaaaagcttatggaaataagctg 5017962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 15321847 - 15321807
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  15321847 tgttttcataagctatcctgaaaagcttatggaaataagct 15321807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 240
Target Start/End: Original strand, 25596042 - 25596193
Alignment:
Q  88 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaa 187  Q
    |||||||||||||||||| |||||||||| ||||||| ||  |||| |||||  || ||||||||| || ||  ||| | | | || ||||   ||||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaacaacttagtaacttgtcataagctgtttttataggttttccctaacaatctcacaa 25596141  T
Q  188 gtgcttatgttgatagataagctcaaataagcttatccaaacaagcccttagt 240  Q
     |||||||| || ||||||||||||||||||    |||||||| |||||||||    
T  25596142 -tgcttatgctggtagataagctcaaataagtcagtccaaacaggcccttagt 25596193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 28165105 - 28165225
Alignment:
Q  93 ataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgct 192  Q
    |||||||||| || |||||||||||||||||| ||  ||||||||| | ||| ||| | || || ||| ||||||| |  |||| ||  ||| |||||||    
T  28165105 ataagctatcatggagagcttatggaaataagttgaaaacagcttatgaacaggtcttgagctgtttccataagctatctcaaagagtctcataagtgct 28165204  T
Q  193 tatgttgatagataagctcaa 213  Q
    |||| || |||||||||||||    
T  28165205 tatgctggtagataagctcaa 28165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 35536045 - 35536101
Alignment:
Q  39 cttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    ||||||| | || ||||| ||| ||||||||||||||||||| ||||||||||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgttttcata 35536101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 46056077 - 46056033
Alignment:
Q  82 aaattgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    |||||||||||||||||||||  | ||||||||||||||||||||    
T  46056077 aaattgttttcataagctatcccgtagagcttatggaaataagct 46056033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 1417215 - 1417258
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||    
T  1417215 tatttatataacaaaagataaaataaagtcaaattgttttcata 1417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 23918896 - 23918951
Alignment:
Q  40 ttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    |||||||| |||||| | ||| ||| ||||||||||||||| ||||||||||||||    
T  23918896 ttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcata 23918951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 25670652 - 25670517
Alignment:
Q  83 aattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcat 182  Q
    ||||||||| ||||  ||||||| ||||||| || ||||||||||  ||||  |||   ||||||||||||||| ||  ||||| | |  |||||||  |    
T  25670652 aattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtct 25670553  T
Q  183 cacaagtgcttatgttgatagataagctcaaataag 218  Q
    |||||| ||||||||  |||||||||||||| ||||    
T  25670552 cacaagagcttatgtcaatagataagctcaagtaag 25670517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 39345478 - 39345581
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    |||||||| |||||||| ||| || |||||||||||||||||  | || |||| |||||||||||||  || ||| || | |||| ||||||||  ||||    
T  39345478 tgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataaactgtttccatgaactctaccaaacagtctcac 39345577  T
Q  186 aagt 189  Q
    ||||    
T  39345578 aagt 39345581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 40439060 - 40439099
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataag 124  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  40439060 ttgttttcattagctatcctgaagagcttatggaaataag 40439099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 3610804 - 3610670
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatca 184  Q
    |||||||| ||| ||||| |  ||||||||| |||||||||||  ||  ||||| ||||||||||| || || ||| ||||| | | ||||| || ||||    
T  3610804 ttgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgtcattagctgtttccataaggtttcccaaaaagtatca 3610705  T
Q  185 caagtgcttatgttgatagataagctcaaataagc 219  Q
    |||||| ||| |    |||||||||||||||||||    
T  3610704 caagtggttaggccagtagataagctcaaataagc 3610670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 12110367 - 12110437
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||||||||||||||||| |||||| |||||| ||   ||||| ||  | |||||||||||||||    
T  12110367 tgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagttg 12110437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 28691900 - 28691767
Alignment:
Q  84 attgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatc 183  Q
    ||||||||||||||||||| || ||| |||||| |||||| |||  ||||  ||| ||||| |||||||| || ||  ||||| || ||| |||||  ||    
T  28691900 attgttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatc-tccgaacagtctc 28691802  T
Q  184 acaagtgcttatgttgatagataagctcaaataag 218  Q
    |||| ||||||||||   |||||| ||||||||||    
T  28691801 acaaatgcttatgttagcagataaactcaaataag 28691767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 39591589 - 39591543
Alignment:
Q  49 agttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    |||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  39591589 agttatttctataacaaaagataaaataaagtcaaattgttttcata 39591543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 8427074 - 8427151
Alignment:
Q  140 ggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaataa 217  Q
    ||||| ||| ||||||| ||| ||| ||||  ||||||||  |||||||| ||||||||  |||||||||||||||||    
T  8427074 ggacacgtcgtaagttgtttccataggctcccccaaacagtctcacaagtacttatgttagtagataagctcaaataa 8427151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 11208455 - 11208523
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||||||||||||||||   |  ||||||||||||||||   ||| |||| |||||||||||||||||    
T  11208455 ttgttttcataagctatcttgggtattttatggaaataagctg---acaacttatggacatgtcataagttg 11208523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 24967052 - 24967161
Alignment:
Q  70 taaaataaagtgaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctc 169  Q
    ||||||||||| ||| ||||||  ||| |||||||||  | ||| || ||||||||||  |||| |||  ||| |||| |||||||| ||| |||| |||    
T  24967052 taaaataaagtcaaactgtttttgtaaactatcttgattaacttgtgaaaataagctgaaaacaacttctggatatgttataagttgtttccataatctc 24967151  T
Q  170 ttccaaacag 179  Q
    ||||||||||    
T  24967152 ttccaaacag 24967161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 36598388 - 36598287
Alignment:
Q  117 gaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagataagctcaaata 216  Q
    |||||||||||  ||||||||| | |||||||||||| || ||| |||||||||  ||||||   |||||| |||||||||   ||| |||| |||||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaattgcttatgtcagtagttaagttcaaata 36598289  T
Q  217 ag 218  Q
    ||    
T  36598288 ag 36598287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 39360030 - 39360123
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 179  Q
    |||||||| |||||||| ||  |||||||| |||||||||||  | || |||| ||| ||||||||||||| ||| |||| ||||  |||||||    
T  39360030 tgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttccataaactctatcaaacag 39360123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 10079380 - 10079269
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgttgatagata 206  Q
    |||||||| ||||||||| || || |||||||   ||||||||| || || ||| ||||||||| ||||||| | ||| ||||| ||||| |  || |||    
T  10079380 agagcttaaggaaataagttgaga-cagcttataaacatgtcatcagctgtttctataagctctcccaaacaacctcataagtgtttatgctcgtaaata 10079282  T
Q  207 agctcaaataagc 219  Q
    |||||||||||||    
T  10079281 agctcaaataagc 10079269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 17988981 - 17988945
Alignment:
Q  201 tagataagctcaaataagcttatccaaacaagccctt 237  Q
    |||||||||||||||||| | ||||||||||||||||    
T  17988981 tagataagctcaaataagttaatccaaacaagccctt 17988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 20553132 - 20553220
Alignment:
Q  108 gagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatg 196  Q
    |||||||||||||||| |||  |||| |||| | ||||||| |||| || ||| ||||||||| |  |||||  |||||||||||||||    
T  20553132 gagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataagctctcctgaacagtctcacaagtgcttatg 20553220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 27517898 - 27517850
Alignment:
Q  107 agagcttatggaaataagctgggaacagcttagggacatgtcataagtt 155  Q
    |||| ||||||||||||||||  ||| ||||| ||||||||||||||||    
T  27517898 agagtttatggaaataagctgaaaactgcttatggacatgtcataagtt 27517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 29363611 - 29363659
Alignment:
Q  182 tcacaagtgcttatgttgatagataagctcaaataagcttatccaaaca 230  Q
    |||||||||||||||||  |||||||| ||||||||||  |||||||||    
T  29363611 tcacaagtgcttatgttagtagataagttcaaataagccaatccaaaca 29363659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 30812155 - 30812195
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagct 126  Q
    ||||||||| ||||||| || ||||||||||||||||||||    
T  30812155 tgttttcattagctatcatggagagcttatggaaataagct 30812195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 39539861 - 39539774
Alignment:
Q  71 aaaataaagtgaaattgttttcata--agctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 156  Q
    |||||||| | ||||||||||||||  ||||||| |   |||||| |  ||||||||||  ||||||||| |||||||||||||||||    
T  39539861 aaaataaattcaaattgttttcatataagctatcctcgggagcttgtcaaaataagctgaaaacagcttatggacatgtcataagttg 39539774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 42656466 - 42656541
Alignment:
Q  52 tatttatatgacataagataaaataaagtgaaattgttttc--ataagctatcttgaagagcttatggaaataagc 125  Q
    ||||| ||| ||| ||||||||||||||| ||||  ||||   ||||||||||||| |||||||||| ||||||||    
T  42656466 tatttctataacaaaagataaaataaagtcaaatcatttttgtataagctatcttggagagcttatgaaaataagc 42656541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 160036 - 159887
Alignment:
Q  86 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcac 185  Q
    ||||||||||||||||| | |||||||| |||||||||||||  ||| |||||  ||||||||||||  || ||| || || ||| | ||| ||  ||||    
T  160036 tgttttcataagctatcctaaagagcttgtggaaataagctgaaaactgcttatagacatgtcataaactgtttccattagttctccaaaatagtttcac 159937  T
Q  186 aagtgcttatgttgatagataagctcaaataagcttatccaaacaagccc 235  Q
    ||||| |||| ||  |||||||||||||||||||  ||||||||| ||||    
T  159936 aagtgtttatattagtagataagctcaaataagccaatccaaacaggccc 159887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 27500 - 27570
Alignment:
Q  25 ttatcatatcagtccttatgtgtgagttatttatatgacataagataaaataaagtgaaattgttttcata 95  Q
    ||||||| | ||| ||||||| | |||||||| ||| ||| ||||||||||||||| ||||||||||||||    
T  27500 ttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcata 27570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 306332 - 306414
Alignment:
Q  85 ttgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagc 167  Q
    |||||||||||||||||| |  |||||||||| || |||||||  ||||||||| || ||||||||||| || ||| ||||||    
T  306332 ttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataagc 306414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 12758 - 12687
Alignment:
Q  95 aagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataag 166  Q
    ||||||||||  ||||||||||||  |||||||  |||| |||| ||||||||||||||||| ||| |||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccataag 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 33687 - 33649
Alignment:
Q  89 tttcataagctatcttgaagagcttatggaaataagctg 127  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  33687 tttcataagctattatgaagagcttatggaaataagctg 33649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 10654 - 10569
Alignment:
Q  112 ttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacagcatcacaagtgcttatgt 197  Q
    ||||||||||||||||  |||| |||| ||||||||||| ||||| ||  ||||||| |  |||||||  |||||||| |||||||    
T  10654 ttatggaaataagctgaaaacaacttatggacatgtcattagttgtttacataagctttgtcaaacagtctcacaagtacttatgt 10569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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