View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1242_low_130 (Length: 256)

Name: NF1242_low_130
Description: NF1242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1242_low_130
NF1242_low_130
[»] chr3 (41 HSPs)
chr3 (7-75)||(20547906-20547974)
chr3 (7-75)||(27541418-27541486)
chr3 (7-75)||(5244316-5244384)
chr3 (7-75)||(32924197-32924265)
chr3 (7-75)||(52939738-52939806)
chr3 (7-64)||(47472427-47472484)
chr3 (7-75)||(16969482-16969550)
chr3 (7-75)||(36670930-36670998)
chr3 (7-75)||(37503663-37503731)
chr3 (7-75)||(42357000-42357068)
chr3 (7-75)||(44856040-44856108)
chr3 (8-75)||(35376998-35377065)
chr3 (7-75)||(19149077-19149145)
chr3 (7-75)||(26014899-26014967)
chr3 (7-75)||(35597249-35597317)
chr3 (7-75)||(38926715-38926783)
chr3 (7-75)||(42358554-42358622)
chr3 (7-75)||(52254054-52254122)
chr3 (8-75)||(37302633-37302700)
chr3 (12-75)||(41309204-41309267)
chr3 (18-75)||(41505578-41505635)
chr3 (10-67)||(44445389-44445446)
chr3 (18-63)||(50318316-50318361)
chr3 (7-75)||(5114165-5114233)
chr3 (7-75)||(7668104-7668171)
chr3 (7-75)||(33939325-33939393)
chr3 (7-75)||(44413311-44413379)
chr3 (7-75)||(44813223-44813291)
chr3 (7-49)||(13735843-13735885)
chr3 (8-49)||(21217625-21217666)
chr3 (8-49)||(23592571-23592612)
chr3 (7-75)||(7934062-7934129)
chr3 (8-48)||(23600707-23600747)
chr3 (7-75)||(24256687-24256755)
chr3 (7-75)||(46623994-46624062)
chr3 (8-75)||(13348051-13348118)
chr3 (25-75)||(45000150-45000200)
chr3 (8-73)||(42889074-42889139)
chr3 (8-49)||(44383302-44383343)
chr3 (7-48)||(45711355-45711396)
chr3 (8-49)||(52326132-52326173)
[»] chr2 (33 HSPs)
chr2 (7-75)||(18254125-18254193)
chr2 (7-75)||(34945006-34945074)
chr2 (7-75)||(37737887-37737955)
chr2 (7-75)||(42421814-42421882)
chr2 (10-75)||(41195671-41195736)
chr2 (7-75)||(2076656-2076724)
chr2 (15-75)||(9207677-9207737)
chr2 (7-75)||(22888733-22888801)
chr2 (7-73)||(6049261-6049327)
chr2 (18-75)||(22416300-22416357)
chr2 (7-75)||(1248773-1248841)
chr2 (7-75)||(41042341-41042409)
chr2 (7-75)||(42091420-42091488)
chr2 (7-75)||(43487466-43487534)
chr2 (12-75)||(9647219-9647282)
chr2 (18-75)||(6511338-6511395)
chr2 (7-76)||(32477418-32477487)
chr2 (7-75)||(3838796-3838864)
chr2 (7-75)||(7698258-7698326)
chr2 (7-63)||(9760117-9760173)
chr2 (7-75)||(19109009-19109077)
chr2 (8-49)||(3097778-3097819)
chr2 (10-75)||(9194328-9194393)
chr2 (12-73)||(19633371-19633432)
chr2 (12-73)||(19830272-19830333)
chr2 (8-49)||(41056664-41056705)
chr2 (7-75)||(9990778-9990846)
chr2 (8-48)||(13333087-13333127)
chr2 (8-75)||(27490647-27490714)
chr2 (18-64)||(17388530-17388576)
chr2 (8-49)||(25270499-25270540)
chr2 (18-75)||(44287369-44287426)
chr2 (18-50)||(10060363-10060395)
[»] chr1 (38 HSPs)
chr1 (7-75)||(35369787-35369855)
chr1 (7-75)||(27464973-27465041)
chr1 (7-75)||(33100895-33100963)
chr1 (7-75)||(649856-649924)
chr1 (7-75)||(45121397-45121464)
chr1 (10-75)||(23645498-23645563)
chr1 (7-75)||(26469446-26469514)
chr1 (7-75)||(31088268-31088336)
chr1 (7-75)||(44519067-44519135)
chr1 (7-75)||(50932391-50932459)
chr1 (7-75)||(52576218-52576286)
chr1 (11-70)||(40861182-40861241)
chr1 (9-75)||(4776843-4776909)
chr1 (7-75)||(3851245-3851313)
chr1 (7-75)||(8828037-8828105)
chr1 (7-75)||(19055675-19055743)
chr1 (7-75)||(37274949-37275017)
chr1 (7-75)||(37619631-37619699)
chr1 (7-75)||(45640389-45640456)
chr1 (7-75)||(48470726-48470794)
chr1 (8-74)||(6809668-6809734)
chr1 (18-75)||(12657309-12657367)
chr1 (15-75)||(45333798-45333858)
chr1 (15-75)||(50726172-50726232)
chr1 (8-75)||(18434882-18434949)
chr1 (8-75)||(19947661-19947728)
chr1 (22-75)||(3159463-3159516)
chr1 (22-75)||(37985317-37985370)
chr1 (7-75)||(8350115-8350182)
chr1 (15-75)||(37685416-37685476)
chr1 (15-75)||(37700042-37700102)
chr1 (8-75)||(30467450-30467517)
chr1 (8-65)||(2571732-2571790)
chr1 (7-69)||(51718542-51718604)
chr1 (22-75)||(9988039-9988092)
chr1 (15-75)||(15469980-15470040)
chr1 (15-75)||(44914496-44914556)
chr1 (9-49)||(46907308-46907348)
[»] chr7 (20 HSPs)
chr7 (186-244)||(45070144-45070202)
chr7 (7-75)||(38956534-38956602)
chr7 (10-75)||(44895491-44895556)
chr7 (7-75)||(3937039-3937107)
chr7 (7-75)||(43025427-43025495)
chr7 (8-75)||(35072279-35072346)
chr7 (7-75)||(22918085-22918153)
chr7 (8-75)||(35098620-35098687)
chr7 (18-75)||(38073307-38073364)
chr7 (7-75)||(24614232-24614300)
chr7 (7-75)||(25192833-25192901)
chr7 (10-75)||(40112873-40112938)
chr7 (8-49)||(46022184-46022225)
chr7 (7-75)||(32529772-32529840)
chr7 (7-75)||(41989656-41989726)
chr7 (20-75)||(46578064-46578119)
chr7 (8-49)||(7701657-7701698)
chr7 (7-75)||(12007102-12007169)
chr7 (7-75)||(41189459-41189527)
chr7 (7-75)||(44189226-44189294)
[»] scaffold0056 (1 HSPs)
scaffold0056 (7-75)||(76535-76603)
[»] chr8 (19 HSPs)
chr8 (7-75)||(12898845-12898913)
chr8 (7-75)||(43397868-43397936)
chr8 (8-75)||(37133779-37133846)
chr8 (7-75)||(7271937-7272005)
chr8 (7-75)||(22719527-22719595)
chr8 (7-75)||(27325845-27325913)
chr8 (15-75)||(32501120-32501180)
chr8 (15-75)||(42768291-42768351)
chr8 (18-75)||(31249451-31249508)
chr8 (7-75)||(4054202-4054270)
chr8 (7-75)||(34186694-34186762)
chr8 (7-75)||(37449341-37449409)
chr8 (8-75)||(11253459-11253526)
chr8 (8-75)||(29025347-29025414)
chr8 (12-50)||(24479335-24479373)
chr8 (7-64)||(5277415-5277472)
chr8 (18-75)||(10731633-10731690)
chr8 (7-48)||(36660366-36660407)
chr8 (7-63)||(36251425-36251481)
[»] chr6 (20 HSPs)
chr6 (7-75)||(552880-552948)
chr6 (8-75)||(14818019-14818086)
chr6 (7-71)||(33430278-33430342)
chr6 (7-75)||(34047474-34047542)
chr6 (12-75)||(1156807-1156870)
chr6 (7-75)||(31077881-31077949)
chr6 (7-75)||(32316844-32316912)
chr6 (8-75)||(277078-277145)
chr6 (10-75)||(15974695-15974760)
chr6 (7-75)||(5694067-5694135)
chr6 (7-75)||(13689910-13689978)
chr6 (7-75)||(18737483-18737551)
chr6 (8-75)||(3853224-3853291)
chr6 (12-75)||(4820454-4820517)
chr6 (18-75)||(8098524-8098581)
chr6 (8-49)||(16199563-16199604)
chr6 (12-75)||(2241946-2242009)
chr6 (8-75)||(22079480-22079547)
chr6 (8-75)||(26595436-26595503)
chr6 (18-75)||(5080494-5080551)
[»] chr5 (25 HSPs)
chr5 (7-75)||(26791160-26791228)
chr5 (7-75)||(33037607-33037675)
chr5 (7-76)||(18258709-18258778)
chr5 (7-75)||(1764311-1764379)
chr5 (7-75)||(13168609-13168677)
chr5 (7-75)||(28467369-28467437)
chr5 (8-75)||(5168270-5168337)
chr5 (7-75)||(7076484-7076552)
chr5 (7-75)||(28306048-28306116)
chr5 (7-75)||(7287105-7287173)
chr5 (7-75)||(14051231-14051299)
chr5 (7-75)||(14923160-14923228)
chr5 (7-75)||(1671629-1671697)
chr5 (7-75)||(2972411-2972479)
chr5 (15-75)||(36739035-36739095)
chr5 (7-75)||(41321342-41321410)
chr5 (18-76)||(35646469-35646527)
chr5 (8-49)||(17626099-17626140)
chr5 (7-75)||(1274445-1274512)
chr5 (6-49)||(3565197-3565240)
chr5 (8-75)||(39054674-39054741)
chr5 (8-75)||(39591767-39591834)
chr5 (8-75)||(39592159-39592226)
chr5 (8-48)||(7552884-7552924)
chr5 (7-75)||(33958175-33958243)
[»] chr4 (41 HSPs)
chr4 (7-75)||(11068775-11068843)
chr4 (7-75)||(24575767-24575835)
chr4 (7-75)||(23369248-23369316)
chr4 (7-75)||(39440571-39440639)
chr4 (7-75)||(44539821-44539889)
chr4 (7-75)||(51986129-51986197)
chr4 (7-74)||(31641481-31641548)
chr4 (4-75)||(40348881-40348952)
chr4 (7-75)||(26732312-26732380)
chr4 (7-75)||(36177993-36178061)
chr4 (7-75)||(38134440-38134508)
chr4 (9-75)||(10250433-10250499)
chr4 (7-75)||(26492094-26492162)
chr4 (7-75)||(27051002-27051070)
chr4 (15-75)||(38376414-38376474)
chr4 (8-76)||(39478523-39478591)
chr4 (7-75)||(53801675-53801743)
chr4 (8-75)||(37297136-37297202)
chr4 (7-73)||(29175314-29175380)
chr4 (7-73)||(46213059-46213125)
chr4 (10-75)||(5622545-5622610)
chr4 (7-75)||(15175633-15175701)
chr4 (8-64)||(34616659-34616715)
chr4 (7-71)||(43175075-43175139)
chr4 (18-75)||(2268434-2268491)
chr4 (7-75)||(27965074-27965140)
chr4 (18-75)||(29531533-29531590)
chr4 (8-49)||(38382434-38382475)
chr4 (6-75)||(42853664-42853733)
chr4 (18-75)||(46634187-46634244)
chr4 (8-49)||(47181954-47181995)
chr4 (8-49)||(48402114-48402155)
chr4 (18-75)||(50608551-50608608)
chr4 (8-49)||(56363962-56364003)
chr4 (7-75)||(26724888-26724956)
chr4 (15-75)||(37997341-37997401)
chr4 (8-75)||(2575707-2575774)
chr4 (8-75)||(7632378-7632445)
chr4 (7-48)||(39606086-39606127)
chr4 (8-76)||(39195143-39195211)
chr4 (7-75)||(51255834-51255901)
[»] scaffold0199 (1 HSPs)
scaffold0199 (8-73)||(8757-8822)
[»] scaffold0098 (1 HSPs)
scaffold0098 (7-69)||(49388-49450)
[»] scaffold0519 (1 HSPs)
scaffold0519 (8-75)||(11869-11936)


Alignment Details
Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 20547906 - 20547974
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  20547906 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagcaata 20547974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 27541418 - 27541486
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  27541418 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 5244384 - 5244316
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  5244384 gtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 5244316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 32924197 - 32924265
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  32924197 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 32924265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 52939806 - 52939738
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  52939806 gtgacaactttcgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 52939738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 47472484 - 47472427
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaa 64  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  47472484 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaa 47472427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 16969482 - 16969550
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||||| |||||    
T  16969482 gtgacaacttttgtgacaactaaaattttacaaaggaaatgaggtagtggcataaaaatcaaaacaata 16969550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 36670930 - 36670998
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||  ||||||||||||| ||||||||||    
T  36670930 gtgataacttttgtgacaaccaaaattttacaaatgaaatgaggtagtggcacaaaaaccaaagcaata 36670998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37503663 - 37503731
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||||||||||||||||  ||||||||||||| | || |||||||||||||||||||    
T  37503663 gtgataacttttgtgacaaccaaaattttgcaaaggaaatgagatattgacacaaaaatcaaagcaata 37503731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 42357000 - 42357068
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  42357000 gtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 42357068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 44856108 - 44856040
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||| | ||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  44856108 gtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaatcaaagaaata 44856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 35376998 - 35377065
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||||| |||| ||||||   | ||||||||||||||||||||||    
T  35376998 tgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtattggcacaaaaatcaaagcaata 35377065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 19149145 - 19149077
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||  ||||||||||||| |||| |||||    
T  19149145 gtgacaatttttgtgacaatcaaaattttacaaaggaaatgagttagtggcacaaaaaccaaaacaata 19149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 26014967 - 26014899
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |  |||||||||| |||| |||||    
T  26014967 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaagggcacaaaaaccaaaacaata 26014899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 35597317 - 35597249
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||||||| |||  |||| |||||||| |||| |||||    
T  35597317 gtgacaacttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaaacaata 35597249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 38926783 - 38926715
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||  |||| |||||||| ||||||||||    
T  38926783 gtgacaactttcgtgacaaccaaaattttacaaaggaaataaggtagtgacacaaaaaccaaagcaata 38926715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 42358554 - 42358622
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||  ||||||||||||  | || |||||||||||||||||||    
T  42358554 gtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtattgacacaaaaatcaaagcaata 42358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 52254054 - 52254122
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  52254054 gtgacaatttttgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 52254122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 37302700 - 37302633
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||||| ||||    
T  37302700 tgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtggcacaaaaaccaaagtaata 37302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 41309267 - 41309204
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||| |||||||||| |||| |||||||  |||| |||||||||||||||||||    
T  41309267 aacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaata 41309204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 41505635 - 41505578
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  41505635 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 41505578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 44445446 - 44445389
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatca 67  Q
    ||||||||| |||||||||||||||||||||| |||||||| | | ||||||||||||    
T  44445446 acaacttttatgacaaccaaaattttataaagaaaatgagatatttgcacaaaaatca 44445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 50318316 - 50318361
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaa 63  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  50318316 tgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaa 50318361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 5114233 - 5114165
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||| |||||| |||||||||| |||| |||||||  |||| |||||||||||||||||||    
T  5114233 gtgacaatttttatgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaatcaaagcaata 5114165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7668104 - 7668171
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||   |||||||| ||| ||||||| ||||| ||||||||||    
T  7668104 gtgacaacttttgtgacaaccaaaatttt-gcaaggaaataagatagtggcataaaaaccaaagcaata 7668171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 33939393 - 33939325
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||| |  |||||||||||   |||| |||||||| ||||||||||    
T  33939393 gtgacaacttttgtgacaaccaaaattattcaaaggaaatgaagtagtgacacaaaaaccaaagcaata 33939325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 44413311 - 44413379
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||  ||||||||| ||||||||||||  | ||||||||||| | ||||||||    
T  44413311 gtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattggcacaaaaaccgaagcaata 44413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 44813291 - 44813223
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||| ||| |||||||||| ||||||||| ||  ||||||||||||| | ||||||||    
T  44813291 gtgacaacttttgtggcaatcaaaattttacaaaggaaattaggtagtggcacaaaaacccaagcaata 44813223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 13735885 - 13735843
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  13735885 gtgacaacttttgtgacaaccaaaattttgcaaaggaaatgag 13735843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 21217666 - 21217625
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  21217666 tgacaacttttgagacaaccaaaattttataaagaaaatgag 21217625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 23592612 - 23592571
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  23592612 tgacaacttttgagacaaccaaaattttataaagaaaatgag 23592571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 7934129 - 7934062
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||||||||| ||||||||| |||||| |||||| |||| || ||||| ||||||||||    
T  7934129 gtgacaatttttgtgacaactaaaattttacaaaggatatgagatagtgaca-aaaaaccaaagcaata 7934062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 23600747 - 23600707
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatga 48  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  23600747 tgacaacttttgagacaaccaaaattttataaagaaaatga 23600707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 24256687 - 24256755
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||  ||||||||| ||||||||||||  | ||  |||||||||||| |||||    
T  24256687 gtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaaatcaaaacaata 24256755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 46624062 - 46623994
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| |||||||||||||| |||||||||| |||| |||||||  |||| |||||||| |||| |||||    
T  46624062 gtgataacttttgtgacaatcaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 46623994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 13348051 - 13348118
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| |||||||||||||||| |||| |||||||  | ||  ||||||| ||||||||||    
T  13348051 tgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaaaccaaagcaata 13348118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 45000200 - 45000150
Alignment:
Q  25 accaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||| |||||    
T  45000200 accaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaatcaata 45000150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 42889139 - 42889074
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    ||||||||||||  | ||||||||||||| |||| |||||||  | ||||||||||| ||||||||    
T  42889139 tgacaacttttgatataaccaaaattttacaaagaaaatgagttattggcacaaaaaccaaagcaa 42889074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 44383343 - 44383302
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||| ||||||||||||||| |||||||    
T  44383343 tgacaacttttgagacaatcaaaattttataaagaaaatgag 44383302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 45711355 - 45711396
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatga 48  Q
    |||||||||||||| ||||||||||||||| |||| ||||||    
T  45711355 gtgacaacttttgtaacaaccaaaattttacaaagaaaatga 45711396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 52326173 - 52326132
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    ||||||||||| |||||| |||||||||| ||||||||||||    
T  52326173 tgacaacttttatgacaatcaaaattttacaaaggaaatgag 52326132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 18254125 - 18254193
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  18254125 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaata 18254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 34945006 - 34945074
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||    
T  34945006 gtgacaactttcgtgacaaccaaaattttacaaaagaaatgaggtagtggcacaaaaatcaaagcaata 34945074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37737887 - 37737955
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| | || |||||||||||||||||||    
T  37737887 gtgacaacttttgtgacaaccaaaactttacaaaggaaatgagatattgacacaaaaatcaaagcaata 37737955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 42421814 - 42421882
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| | ||||||||||    
T  42421814 gtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaacaccaaagcaata 42421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 41195736 - 41195671
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||| ||||||||||||| | || |||||||| ||||||||||    
T  41195736 acaacttttgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaagcaata 41195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 2076724 - 2076656
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||  | || |||||||||||||||||||    
T  2076724 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaata 2076656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 9207737 - 9207677
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  9207737 ttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 9207677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 22888733 - 22888801
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  | ||||||||||| ||||||||||    
T  22888733 gtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaata 22888801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 6049261 - 6049327
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  | ||||||||||| ||||||||    
T  6049261 gtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaa 6049327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 22416357 - 22416300
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||    
T  22416357 tgtgacaaccaaaattttacaaagaaaatgaggcagtggcacaaaaaccaaagcaata 22416300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 1248841 - 1248773
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  1248841 gtgacaacttttgtgataattaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 1248773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 41042409 - 41042341
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| | || || ||||| ||||||||||    
T  41042409 gtgacaatttttatgacaaccaaaattttataaaggaaatgagatattgacataaaaaccaaagcaata 41042341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 42091420 - 42091488
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||||||||||||||||||| |||||||| |||  |||| |||||||| ||||||||||    
T  42091420 gtgacaatttttgtgacaaccaaaattttacaaaggaaacgaggtagtgacacaaaaaccaaagcaata 42091488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 43487534 - 43487466
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  43487534 gtgacaatttttgtaacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 43487466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 9647282 - 9647219
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||| |||||||||||   |||| |||||||| ||||||||||    
T  9647282 aacttttgtgacaaccaaaattttacaaaggaaatgaagtagtgacacaaaaaccaaagcaata 9647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 6511395 - 6511338
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||| ||||||||||    
T  6511395 tgtgacaatcaaaattttataaaggaaatgaggtagtgacacaaaaaccaaagcaata 6511338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 32477487 - 32477418
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaatat 76  Q
    |||||||||||||||||||||||||||| | ||||||||||||  | |   |||||||||||||||||||    
T  32477487 gtgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggtattcatacaaaaatcaaagcaatat 32477418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 3838796 - 3838864
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| ||  ||||||||| |||||||||||  ||||| ||||||||||||| |||||    
T  3838796 gtgacaacttttgtgataattaaaattttacaaaggaaatgaagcagtgacacaaaaatcaaaacaata 3838864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 7698326 - 7698258
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||| ||  ||||||||| ||||||||| ||  ||||||||||||||||||||||||    
T  7698326 gtgataacttttgtgataattaaaattttacaaaggaaattaggtagtggcacaaaaatcaaagcaata 7698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 9760173 - 9760117
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaa 63  Q
    |||||||||||||||||||||||||||||   |||||||||||  ||||||||||||    
T  9760173 gtgacaacttttgtgacaaccaaaatttttccaaggaaatgaggtagtggcacaaaa 9760117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 19109009 - 19109077
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||| ||  ||||  |||||||||||   ||||||||||||||||||||||||    
T  19109009 gtgacaacttttgtgacaacaaattttttgcaaaggaaatgaagtagtggcacaaaaatcaaagcaata 19109077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 3097778 - 3097819
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  3097778 tgacaacttttgagacaaccaaaattttataaagaaaatgag 3097819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 9194393 - 9194328
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| |||||||||||||||||||||| ||| ||||||||  | ||||||||||| |||| |||||    
T  9194393 acaatttttgtgacaaccaaaattttacaaaagaaatgaggtaatggcacaaaaaccaaaacaata 9194328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 19633432 - 19633371
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    |||||||||||||| |||||||||| ||||||||||||  ||||  ||||||| ||||||||    
T  19633432 aacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaagcaa 19633371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 19830333 - 19830272
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    |||||||||||||| |||||||||| ||||||||||||  ||||  ||||||| ||||||||    
T  19830333 aacttttgtgacaatcaaaattttacaaaggaaatgaggtagtgatacaaaaaccaaagcaa 19830272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 41056664 - 41056705
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  41056664 tgacaacttttgagacaaccaaaattttataaagaaaatgag 41056705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 9990846 - 9990778
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||||||  ||||||||| |||||||||||   ||||| ||||||| ||||||||||    
T  9990846 gtgataacttttgtgacaattaaaattttacaaaggaaatgaagtagtggtacaaaaaccaaagcaata 9990778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 13333087 - 13333127
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatga 48  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  13333087 tgacaacttttgagacaaccaaaattttataaagaaaatga 13333127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 27490647 - 27490714
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||| |||||||||| |||| ||||||   | |  |||||||||||||||||||    
T  27490647 tgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaacacaaaaatcaaagcaata 27490714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 17388530 - 17388576
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaa 64  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||    
T  17388530 tgtgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaa 17388576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 25270499 - 25270540
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||| | ||||||||||||||||||||| |||||||    
T  25270499 tgacaactttcgagacaaccaaaattttataaagaaaatgag 25270540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 44287369 - 44287426
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||||||   ||||||||| || |||| |||||    
T  44287369 tgtgacaaccaaaattttacaaaggaaatgaggttgtggcacaataaccaaaacaata 44287426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 10060363 - 10060395
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgaga 50  Q
    ||||||||| |||||||||||||||||||||||    
T  10060363 tgtgacaactaaaattttataaaggaaatgaga 10060395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 35369855 - 35369787
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  35369855 gtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaagcaata 35369787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 27464973 - 27465041
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  27464973 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27465041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 33100963 - 33100895
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||| |||||    
T  33100963 gtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtagtgacacaaaaatcaaaacaata 33100895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 649924 - 649856
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  649924 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 649856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 45121397 - 45121464
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  45121397 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgag-tagtggcacaaaaaccaaagcaata 45121464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 23645563 - 23645498
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| |||||    
T  23645563 acaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaaacaata 23645498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 26469514 - 26469446
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||| | ||||||||    
T  26469514 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccgaagcaata 26469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 31088336 - 31088268
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||  |||||||  ||||||||||||| ||||||||||    
T  31088336 gtgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggtagtggcacaaaaaccaaagcaata 31088268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 44519067 - 44519135
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  | | ||||||||||||||||||||    
T  44519067 gtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtattagcacaaaaatcaaagcaata 44519135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 50932459 - 50932391
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||| ||||||||||||||| ||||||||||||  | || |||||||||||||||||||    
T  50932459 gtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattgacacaaaaatcaaagcaata 50932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 52576218 - 52576286
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |  |||||||||| ||||||||||    
T  52576218 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtaccggcacaaaaaccaaagcaata 52576286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 40861182 - 40861241
Alignment:
Q  11 caacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaag 70  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| |||||    
T  40861182 caacttttgtgacaactaaaattttataaaggaaataagatagtggcacaaaaaccaaag 40861241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 4776909 - 4776843
Alignment:
Q  9 gacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||   |||||||||||||||||||||  ||||||||||||||||||| ||||    
T  4776909 gacaacttttgtgacaatttaaattttataaaggaaatgaggtagtggcacaaaaatcaaagtaata 4776843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 3851313 - 3851245
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||| || ||||| |||| |||||    
T  3851313 gtgacaacttttatgacaaccaaaattttataaaggaaatgaggtagtgacagaaaaaccaaaacaata 3851245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 8828037 - 8828105
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||  | ||||||||||| ||||||||||    
T  8828037 gtgacaatttttgcgacaaccaaaattttataaaagaaatgaggtattggcacaaaaaccaaagcaata 8828105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 19055675 - 19055743
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| | || |||||||| |||| |||||    
T  19055675 gtgacaacttttgtgacaactaaaattttacaaaggaaatgagatattgtcacaaaaaccaaaacaata 19055743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37274949 - 37275017
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||  ||||||||||||  |||| |||||||| ||||||||||    
T  37274949 gtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagcaata 37275017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 37619699 - 37619631
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| | ||||||||||||||| ||||||||||||  | ||||||||||||||| ||||||    
T  37619699 gtgacaacttttattacaaccaaaattttacaaaggaaatgaggtattggcacaaaaatcaacgcaata 37619631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 45640456 - 45640389
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||  |||||||||||||| |||| |||||||| | ||||||||||||||||||||||    
T  45640456 gtgacaacttttgttgcaaccaaaattttacaaag-aaatgagatattggcacaaaaatcaaagcaata 45640389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 48470794 - 48470726
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| | ||||||| ||| |||| |||||    
T  48470794 gtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatattggcacagaaaccaaaacaata 48470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 6809734 - 6809668
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaat 74  Q
    |||||||||||| |||||||||||||||||| || |||||| ||| | |||||||||||||| ||||    
T  6809734 tgacaacttttgggacaaccaaaattttatatagaaaatgatacattagcacaaaaatcaaaacaat 6809668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 12657367 - 12657309
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtgg-cacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||    
T  12657367 tgtgacaaccaaaattttataaaggaaatgaggtagtggacacaaaaaccaaagcaata 12657309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 45333858 - 45333798
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||  ||||||||| ||||||||||||  |||| |||||||||||||||||||    
T  45333858 ttttgtgacaattaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaata 45333798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 50726172 - 50726232
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||  |||| |||||||  |||||||||||||||||| |||||    
T  50726172 ttttgtgacaaccaaaattttgcaaagaaaatgaggtagtggcacaaaaatcaaaacaata 50726232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 18434949 - 18434882
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||||  |||| ||||||   | |||||||||||||||| |||||    
T  18434949 tgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtattggcacaaaaatcaaaacaata 18434882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 19947661 - 19947728
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  | ||| ||||||| ||||||||||    
T  19947661 tgacaacttttgagacaaccaaaattttataaagaaaaggaggtattgggacaaaaaccaaagcaata 19947728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 3159516 - 3159463
Alignment:
Q  22 acaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||| ||||||||||||  |||||||||||||  |||||||||    
T  3159516 acaaccaaaattttacaaaggaaatgaggtagtggcacaaaaacaaaagcaata 3159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 37985317 - 37985370
Alignment:
Q  22 acaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||| ||||||||||||||||||||||  |||| ||||||||| |||||||||    
T  37985317 acaactaaaattttataaaggaaatgaggtagtgtcacaaaaattaaagcaata 37985370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 8350115 - 8350182
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| ||||||||||||| |||| ||||||||| ||  |||| |||||||| ||||||||||    
T  8350115 gtgacaactttcgtgacaaccaaaa-tttacaaaggaaataaggtagtgacacaaaaaccaaagcaata 8350182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 37685476 - 37685416
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||  ||||||||| ||| ||||||||  |||| |||||||||||||||||||    
T  37685476 ttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaata 37685416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 37700042 - 37700102
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||  ||||||||| ||| ||||||||  |||| |||||||||||||||||||    
T  37700042 ttttgtgacaattaaaattttacaaaagaaatgaggtagtgacacaaaaatcaaagcaata 37700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 30467450 - 30467517
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||| ||||| |||| ||| |||| | || |||| ||||||||||||||    
T  30467450 tgacaacttttgtgacaactaaagttttacaaagaaaacgagagattgacacacaaatcaaagcaata 30467517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 2571790 - 2571732
Alignment:
Q  8 tgacaacttttgtgacaaccaaaatttt-ataaaggaaatgagacagtggcacaaaaat 65  Q
    |||||||||||||||||||||||||||| | |||| |||||||  |||| |||||||||    
T  2571790 tgacaacttttgtgacaaccaaaattttaacaaagaaaatgaggtagtgacacaaaaat 2571732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 51718542 - 51718604
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaa 69  Q
    |||||||||||||||| ||| |||| |||| |||||||||||   |||| |||||||||||||    
T  51718542 gtgacaacttttgtgataactaaaactttacaaaggaaatgaagtagtgacacaaaaatcaaa 51718604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 9988092 - 9988039
Alignment:
Q  22 acaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||| |||  |||||||  | ||||||||||||||||||||||    
T  9988092 acaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaagcaata 9988039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 15469980 - 15470040
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||  ||||||||||||||||||||||  ||| || |||||| |||| |||||    
T  15469980 ttttgtgacaattaaaattttataaaggaaatgaggtagtagcgcaaaaaccaaaacaata 15470040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 44914496 - 44914556
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||| ||||| |||||||||| ||||||||||||  |||| ||||||||  |||||||||    
T  44914496 ttttgcgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaactaaagcaata 44914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 46907348 - 46907308
Alignment:
Q  9 gacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    ||||||||||| ||||| ||||||||||||||| |||||||    
T  46907348 gacaacttttgagacaatcaaaattttataaagaaaatgag 46907308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 45070144 - 45070202
Alignment:
Q  186 agacgcattctttgtaatattcactcaccagtagtttccaaaaacctactcatgatctc 244  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45070144 agacgcatgctttgtaatattcactcaccagtagtttccaaaaacctactcatgatctc 45070202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 38956534 - 38956602
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  38956534 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaacaaagcaata 38956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 44895491 - 44895556
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  44895491 acaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 44895556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 3937039 - 3937107
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||| ||||    
T  3937039 gtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagtaata 3937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 43025495 - 43025427
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  43025495 gtgacaacttttgtaacaactaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagcaata 43025427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 35072279 - 35072346
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| || |||||||||||||||||||    
T  35072279 tgacaacttttgaaacaaccaaaattttataaagaaaatgagacattgacacaaaaatcaaagcaata 35072346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 22918085 - 22918153
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  22918085 gtgacaacttttgcgacaatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 22918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 35098620 - 35098687
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||  ||||||||||||||||| || |||||||||| || |||||||||||||||||||    
T  35098620 tgacaacttttgaaacaaccaaaattttatatagaaaatgagacattgacacaaaaatcaaagcaata 35098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 38073364 - 38073307
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||||||  | ||||||||||| ||||||||||    
T  38073364 tgtgacaaccaaaattttacaaaggaaatgaggtattggcacaaaaaccaaagcaata 38073307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 24614232 - 24614300
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||| || |||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  24614232 gtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaata 24614300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 25192833 - 25192901
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||| ||||||||| |||| |||||||  |||| |||||||| |||| |||||    
T  25192833 gtgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 25192901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 40112873 - 40112938
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| | |||||| |||||||||| ||||||||| ||  ||||||||||||| ||||||||||    
T  40112873 acaacttctctgacaatcaaaattttacaaaggaaataaggtagtggcacaaaaaccaaagcaata 40112938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 46022184 - 46022225
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  46022184 tgacaacttttgagacaaccaaaattttataaagaaaatgag 46022225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 32529772 - 32529840
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||  ||||  | ||||| ||||||||||    
T  32529772 gtgacaatttttgtgacaatcaaaattttacaaaggaaatgaggtagtgataaaaaaaccaaagcaata 32529840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 41989656 - 41989726
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaatttt--ataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||||||||||||||||  | |||  |||||||  ||||||||||||| ||||||||||    
T  41989656 gtgataacttttgtgacaaccaaaattttacaaaaaaaaaatgaggtagtggcacaaaaaccaaagcaata 41989726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 46578064 - 46578119
Alignment:
Q  20 tgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||| |||| |||  | |||||||||||||||| |||||    
T  46578064 tgacaaccaaaattttataaaagaaacgaggtattggcacaaaaatcaaatcaata 46578119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 7701698 - 7701657
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| |||||||||| |||||||||| |||||||    
T  7701698 tgacaacttttgagacaaccaaagttttataaagaaaatgag 7701657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12007102 - 12007169
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||| |  |||||||||| ||||| |||| || | ||| ||||||||||||||||||||||||    
T  12007102 gtgacaacttgttggacaaccaaa-ttttacaaagaaatttagatagtggcacaaaaatcaaagcaata 12007169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 41189459 - 41189527
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||| |||||| |||||||||| ||||||||||||  | || ||||||||  |||||||||    
T  41189459 gtgataacttttatgacaatcaaaattttacaaaggaaatgaggtattgacacaaaaactaaagcaata 41189527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 44189226 - 44189294
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| |||||||||||||| ||||| |||  ||||||||||||  |||| |||||||| ||||| ||||    
T  44189226 gtgataacttttgtgacaatcaaaaattttcaaaggaaatgagttagtgacacaaaaaccaaagtaata 44189294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 76535 - 76603
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  76535 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 76603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12898845 - 12898913
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||    
T  12898845 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgagatagtggcgcaaaaaccaaagcaata 12898913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 43397936 - 43397868
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||| ||||| ||||    
T  43397936 gtgacagcttttgtgacaaccaaaattttacaaagaaaatgagatagtggcacaaaaaccaaagtaata 43397868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 37133779 - 37133846
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||||| |||| |||||| | | || |||||||||||||||||||    
T  37133779 tgacaacttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaata 37133846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 7272005 - 7271937
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||| |||| |||||||| ||||||||||    
T  7272005 gtgacaacttttgtgacaatcaaaattttgcaaaagaaatgagatagtgacacaaaaaccaaagcaata 7271937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 22719595 - 22719527
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| ||||||||||||| |||| |||||||  ||| ||||||||| ||||||||||    
T  22719595 gtgacaacttttgtgataaccaaaattttacaaagaaaatgaggtagttgcacaaaaaccaaagcaata 22719527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 27325913 - 27325845
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| |||| || |||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  27325913 gtgacaactttcgtgataatcaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 27325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 32501120 - 32501180
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||| ||||||||||||  |||| |||||||||||||| ||||    
T  32501120 ttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaata 32501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 42768351 - 42768291
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| ||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  42768351 ttttgtgacaactaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaagcaata 42768291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 31249451 - 31249508
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||||||  ||||| ||||||| ||||||||||    
T  31249451 tgtgacaaccaaaattttacaaaggaaatgaggtagtggtacaaaaaccaaagcaata 31249508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 4054202 - 4054270
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||| |||| ||| ||||||||  |||| |||||||| ||||||||||    
T  4054202 gtgacaacttttgtgacaatcaaaactttacaaatgaaatgaggtagtgacacaaaaaccaaagcaata 4054270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 34186762 - 34186694
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||  ||||||||||||  |||| |||||||| ||||| ||||    
T  34186762 gtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtagtgacacaaaaaccaaagtaata 34186694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37449341 - 37449409
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||| || |||||||||| ||||||||||||  ||| ||||||||| ||||||||||    
T  37449341 gtgataacttttgtgataatcaaaattttacaaaggaaatgaggtagtagcacaaaaaccaaagcaata 37449409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 11253459 - 11253526
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| |||||||||||| |||| |||||||  | || |||||||| ||||||||||    
T  11253459 tgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 11253526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 29025414 - 29025347
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| |||||||||||||||| |||| |||||||  | || |||||||| ||||||||||    
T  29025414 tgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 29025347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 24479373 - 24479335
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgaga 50  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  24479373 aacttttgtgacaactaaaattttacaaaggaaatgaga 24479335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 5277415 - 5277472
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaa 64  Q
    ||||||| || |||||||| |||||||||| ||||||||||||  |||| ||||||||    
T  5277415 gtgacaatttatgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaaa 5277472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 10731690 - 10731633
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||| |||||||||| |||||||||||   | || |||||||||||||||||||    
T  10731690 tgtgacaatcaaaattttacaaaggaaatgaagtattgacacaaaaatcaaagcaata 10731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 36660366 - 36660407
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatga 48  Q
    |||| |||||||||||||| ||||||||||||||| ||||||    
T  36660366 gtgataacttttgtgacaatcaaaattttataaagaaaatga 36660407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 36251481 - 36251425
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaa 63  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||  |||| |||||||    
T  36251481 gtgataactttcgtgacaatcaaaattttacaaaggaaatgaggtagtgacacaaaa 36251425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 552948 - 552880
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  552948 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 552880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 14818086 - 14818019
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||| |||||    
T  14818086 tgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcacaaaaaccaaaacaata 14818019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 33430278 - 33430342
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagc 71  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||    
T  33430278 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagc 33430342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 34047542 - 34047474
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| | ||||||||||| ||||||||||    
T  34047542 gtgacaacttttgtgacaaccaaaattttacaaagaaaaagagatattggcacaaaaaccaaagcaata 34047474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 1156870 - 1156807
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  1156870 aacttttgtgacaatcaaaattttgtaaaggaaatgagatagtggcacaaaaaccaaagtaata 1156807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 31077949 - 31077881
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||| ||||  |||| |||||||| |||| |||||    
T  31077949 gtgacaacttttgtgacaaccaaaattttacaaaggaagtgaggtagtgacacaaaaaccaaaacaata 31077881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 32316844 - 32316912
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||  | || |||||||| ||||||||||    
T  32316844 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtactgacacaaaaaccaaagcaata 32316912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 277145 - 277078
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||| |||||||||||||||||||||| |||| |||||| | | || |||||||||||||||||||    
T  277145 tgacaatttttgtgacaaccaaaattttacaaagaaaatgatatattgacacaaaaatcaaagcaata 277078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 15974760 - 15974695
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||||||||||| |||||||||||   |||  |||||||| ||||||||||    
T  15974760 acaacttttgtgacaaccaaaattttacaaaggaaatgaagtagtaacacaaaaaccaaagcaata 15974695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 5694067 - 5694135
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||  | || ||||||||||||| |||||    
T  5694067 gtgacaacttttgagacaacctaaattttacaaaggaaatgaggtattgacacaaaaatcaaaacaata 5694135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 13689910 - 13689978
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||  |||||| ||||||||||||||||||||||  | || |||||||||||||||||||    
T  13689910 gtgacaatttttacgacaactaaaattttataaaggaaatgaggtattgacacaaaaatcaaagcaata 13689978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 18737483 - 18737551
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||  | || |||||||| |||| |||||    
T  18737483 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgtcacaaaaaccaaaacaata 18737551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 3853224 - 3853291
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| |||||| || |||||| |||| |||||||| | || |||||||||||||||||||    
T  3853224 tgacaacttttgagacaacaaagattttacaaagaaaatgagatattgacacaaaaatcaaagcaata 3853291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 4820517 - 4820454
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||| ||||| |||||||||| |||| ||||||| || || |||||||||||||||||||    
T  4820517 aacttttgagacaatcaaaattttacaaagaaaatgaggcattgacacaaaaatcaaagcaata 4820454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 8098524 - 8098581
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||| ||  |||| |||||||| ||||||||||    
T  8098524 tgtgacaaccaaaattttagaaaggaaataaggtagtgacacaaaaaccaaagcaata 8098581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 16199604 - 16199563
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  16199604 tgacaacttttgagacaaccaaaattttataaagaaaatgag 16199563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 2241946 - 2242009
Alignment:
Q  12 aacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||  || |||| ||||||| || || |||||||| ||||||||||    
T  2241946 aacttttgtgacaaccaaaataatacaaagaaaatgaggcattgacacaaaaaccaaagcaata 2242009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 22079480 - 22079547
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| |||||||||||||||||||||||  |||| ||||||   | || |||||||||||||||||||    
T  22079480 tgaccacttttgtgacaaccaaaattttgcaaagaaaatgatgtattgacacaaaaatcaaagcaata 22079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 26595503 - 26595436
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||  ||||||||||||||| |||| |||||||  | || |||||||| ||||||||||    
T  26595503 tgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 26595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 5080494 - 5080551
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||| ||||||||||||| ||||||||||||  |||| ||||||||  |||||||||    
T  5080494 tgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaactaaagcaata 5080551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 26791160 - 26791228
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  26791160 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgagttagtggcacaaaaaccaaagcaata 26791228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 33037675 - 33037607
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||    
T  33037675 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagcaata 33037607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 18258709 - 18258778
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaatat 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||| |||||    
T  18258709 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagaaatat 18258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 1764379 - 1764311
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||||    
T  1764379 gtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggtagtggcataaaaaccaaagcaata 1764311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 13168677 - 13168609
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||| ||||    
T  13168677 gtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatagtggcacaaaaaccaaagtaata 13168609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 28467369 - 28467437
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||    
T  28467369 gtgacaatttttgtgacaaccaaaattttataaaggaaatgaggcagtgacacaaaaaccaaaacaata 28467437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 5168337 - 5168270
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||| |||| |||||||  ||||||||||||||||||||||||    
T  5168337 tgacaacttttgtgacaactaaaattttacaaagaaaatgaggtagtggcacaaaaatcaaagcaata 5168270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7076484 - 7076552
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||||||||||   | ||||||||||| ||||||||||    
T  7076484 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaagtaatggcacaaaaaccaaagcaata 7076552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 28306048 - 28306116
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||  ||||||||||| | ||||||||||    
T  28306048 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaagaccaaagcaata 28306116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7287105 - 7287173
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||  |||| |||||||| |||| |||||    
T  7287105 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtgacacaaaaaccaaaacaata 7287173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 14051231 - 14051299
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||||||||||||||||| |||| |||||||  ||||||||||||| |||| |||||    
T  14051231 gtgataacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaaacaata 14051299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 14923228 - 14923160
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| |||| ||||||||||||| ||| ||||||||  ||||||||||||| ||||||||||    
T  14923228 gtgacaactttcgtgaaaaccaaaattttacaaaagaaatgaggtagtggcacaaaaaccaaagcaata 14923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 1671697 - 1671629
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  | || |||||||| |||| |||||    
T  1671697 gtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtactgacacaaaaaccaaaacaata 1671629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 2972479 - 2972411
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||| |  |||||||||||  | || |||||||||||||||||||    
T  2972479 gtgacaacttttgtgacaatcaaaatttcacgaaggaaatgaggtattgacacaaaaatcaaagcaata 2972411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 36739095 - 36739035
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||| ||| ||||||||  |||| |||||||| ||||||||||    
T  36739095 ttttgtgacaaccaaaattttacaaaagaaatgaggtagtgacacaaaaaccaaagcaata 36739035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 41321410 - 41321342
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| |||||||||||||||||||||| ||||||||||||  | || |||||||| ||||| ||||    
T  41321410 gtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaaccaaagtaata 41321342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 35646527 - 35646469
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaatat 76  Q
    ||||||||| ||||||||| ||||||||||||  |||| |||||||| |||||||||||    
T  35646527 tgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaatat 35646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 17626140 - 17626099
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  17626140 tgacaacttttgagacaaccaaaattttataaagaaaatgag 17626099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 1274512 - 1274445
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| || |||||||||||||| ||||| ||||||| | || |||||||| ||||||||||    
T  1274512 gtgacaacttttatg-caaccaaaattttacaaagggaatgagatattgacacaaaaaccaaagcaata 1274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 3565240 - 3565197
Alignment:
Q  6 agtgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||||| |||||||||||||||| |||| |||||||    
T  3565240 agtgacaacttttgagacaaccaaaattttacaaagaaaatgag 3565197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 39054741 - 39054674
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||| || |||||||||  |||| |||||| | | | ||||||||||||||||||||    
T  39054741 tgacaacttttgtgataatcaaaattttgcaaagaaaatgatatatttgcacaaaaatcaaagcaata 39054674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 39591834 - 39591767
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||||||||||||| ||||| |||| |||||||| | || |||| ||| ||||||||||    
T  39591834 tgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaata 39591767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 39592226 - 39592159
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||||||||||||| ||||| |||| |||||||| | || |||| ||| ||||||||||    
T  39592226 tgacaacctttgtgacaaccaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaata 39592159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 7552884 - 7552924
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatga 48  Q
    ||||||||||||||||||||||||||||  |||| ||||||    
T  7552884 tgacaacttttgtgacaaccaaaattttgcaaagaaaatga 7552924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 33958175 - 33958243
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||| ||||||||| || |||| |||| ||| |||| | || |||||||| ||||||||||    
T  33958175 gtgacaacttttatgacaaccataaatttacaaagaaaaagagatattgacacaaaaaccaaagcaata 33958243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 11068843 - 11068775
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  11068843 gtgacaacttttgtggcaaccaaaattttacaaaggaaatgaggcagtgacacaaaaatcaaagcaata 11068775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 24575767 - 24575835
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||||    
T  24575767 gtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtattggcacaaaaaccaaagcaata 24575835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 23369248 - 23369316
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||| ||||||||||    
T  23369248 gtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggtagtggcacaaaaaccaaagcaata 23369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 39440639 - 39440571
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| |||||||||| ||||||||||||  |||| |||||||||||||||||||    
T  39440639 gtgacaacttttgtgacaatcaaaattttagaaaggaaatgaggtagtgacacaaaaatcaaagcaata 39440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 44539889 - 44539821
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||||    
T  44539889 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtgtcacaaaaaccaaagcaata 44539821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 51986197 - 51986129
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||| ||||    
T  51986197 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtagtggcacaaaaaccaaagaaata 51986129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 31641481 - 31641548
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaat 74  Q
    |||| ||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||    
T  31641481 gtgataacttttgtgacaaccaaaattttataaaggaaataaggtagtgacacaaaaatcaaagcaat 31641548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 40348952 - 40348881
Alignment:
Q  4 tcagtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||| |||| |||||||| ||||||||||    
T  40348952 tcagtgacaacttttgtgacaatcaaaattttttaaagaaaatgagatagtgacacaaaaaccaaagcaata 40348881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 26732380 - 26732312
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||  ||||||||||||| |||| |||||    
T  26732380 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtagtggcacaaaaaccaaaacaata 26732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 36178061 - 36177993
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||||||||| ||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  36178061 gtgataacttttgtgacaactaaaattttataaaggaaatgaggtagtggtacaaaaaccaaagcaata 36177993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 38134508 - 38134440
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||| |||| |||||    
T  38134508 gtgacaacttttgtgataaccaaaattttacaaaggaaatgaggcagtgacacaaaaaccaaaacaata 38134440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 10250433 - 10250499
Alignment:
Q  9 gacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||| |||| ||||||   ||||||||||||| ||||||||||    
T  10250433 gacaacttttgtgacaaccaaaattttacaaagaaaatgaagtagtggcacaaaaaccaaagcaata 10250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 26492162 - 26492094
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||||||||| |||||||||| |||||||||||   ||||||||||||| ||||||||||    
T  26492162 gtgacaatttttgtgacaatcaaaattttacaaaggaaatgaagtagtggcacaaaaaccaaagcaata 26492094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 27051002 - 27051070
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| |||| |||||||| | || |||||||| |||| |||||    
T  27051002 gtgacaacttttgtgacaaccaaaattttacaaagaaaatgagatattgacacaaaaaccaaaacaata 27051070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 38376414 - 38376474
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||| ||||    
T  38376414 ttttgtgacaatcaaaattttacaaagaaaatgagatagtggcacaaaaatcaaagtaata 38376474  T

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Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 39478591 - 39478523
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaatat 76  Q
    ||||||||||||||||||||||||||||| |||| |||||||  | || |||||||||||||| |||||    
T  39478591 tgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagtaatat 39478523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 53801675 - 53801743
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||| ||||||||||||  | || ||||||||  |||||||||    
T  53801675 gtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtattgacacaaaaactaaagcaata 53801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 37297202 - 37297136
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||||||||||||||||  |||||||||||  |||| |||||||| ||||||||||    
T  37297202 tgacaacttttgtgacaaccaaaatttta-caaggaaatgaggtagtgacacaaaaaccaaagcaata 37297136  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 29175380 - 29175314
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    |||||||||||||||||||||||||||||| |||| |||||||  | || |||||||| ||||||||    
T  29175380 gtgacaacttttgtgacaaccaaaattttacaaagtaaatgagctattgacacaaaaaccaaagcaa 29175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 46213125 - 46213059
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||  ||| ||||||||| ||||||||    
T  46213125 gtgaaaacttttgtaacaaccaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaagcaa 46213059  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 5622610 - 5622545
Alignment:
Q  10 acaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||| ||| ||||||||| ||||||||||||  ||| ||||||||| ||||||||||    
T  5622610 acaacttttgtgataactaaaattttacaaaggaaatgaggtagttgcacaaaaaccaaagcaata 5622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 15175701 - 15175633
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||| ||||||||||||||| ||||||||||||  | | |||||||||  |||||||||    
T  15175701 gtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtattagcacaaaaacaaaagcaata 15175633  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 34616715 - 34616659
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaa 64  Q
    |||||||||||| ||||||||||||||||||||| |||||||| | || ||||||||    
T  34616715 tgacaacttttgagacaaccaaaattttataaagaaaatgagatattgacacaaaaa 34616659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 43175139 - 43175075
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagc 71  Q
    |||||||||||||||| || |||||||||| ||||||||||||  |||| |||||||| ||||||    
T  43175139 gtgacaacttttgtgataatcaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagc 43175075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 2268434 - 2268491
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||||||| | || |||||||| |||| |||||    
T  2268434 tgtgacaaccaaaattttacaaaggaaatgagatattgacacaaaaaccaaaacaata 2268491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 27965140 - 27965074
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||| |||||||||||||||||  ||| |||||||||  |||| |||||||| ||||||||||    
T  27965140 gtgacaacttctgtgacaaccaaaattt--taatggaaatgaggtagtgacacaaaaaccaaagcaata 27965074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 29531533 - 29531590
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||||||||||||  |||| |||||||| |||| |||||    
T  29531533 tgtgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaacaata 29531590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 38382475 - 38382434
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  38382475 tgacaacttttgagacaaccaaaattttataaagaaaatgag 38382434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 42853733 - 42853664
Alignment:
Q  6 agtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||| ||||| ||||| ||||||||||||||| |||||||  | || |||||||| ||||||||||    
T  42853733 agtgacaatttttgagacaatcaaaattttataaagaaaatgaggtattgacacaaaaaccaaagcaata 42853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 46634244 - 46634187
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||| ||||||||| ||||||||||||  |||| |||||||||||||| ||||    
T  46634244 tgtgacaactaaaattttacaaaggaaatgaggtagtgacacaaaaatcaaagtaata 46634187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 47181995 - 47181954
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  47181995 tgacaacttttgagacaaccaaaattttataaagaaaatgag 47181954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 48402114 - 48402155
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  48402114 tgacaacttttgagacaaccaaaattttataaagaaaatgag 48402155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 50608551 - 50608608
Alignment:
Q  18 tgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||| ||||||||| ||||||||||||| | || |||||||||||||| ||||    
T  50608551 tgtgacaactaaaattttacaaaggaaatgagatattgacacaaaaatcaaagtaata 50608608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 56363962 - 56364003
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgag 49  Q
    |||||||||||| ||||||||||||||||||||| |||||||    
T  56363962 tgacaacttttgagacaaccaaaattttataaagaaaatgag 56364003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 26724888 - 26724956
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||| ||||||||| ||||| ||||||||| ||||||||||||  |||| |||||||| |||| |||||    
T  26724888 gtgataacttttgtaacaactaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaaacaata 26724956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 37997401 - 37997341
Alignment:
Q  15 ttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||| ||||||||||||||| |||| |||||||  | || |||||||||||||||||||    
T  37997401 ttttgttacaaccaaaattttacaaagaaaatgaggtattgacacaaaaatcaaagcaata 37997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 2575707 - 2575774
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||||||||||||||| ||| ||||| |||| |||||||| | || |||| ||| ||||||||||    
T  2575707 tgacaacttttgtgacaactaaagttttacaaagaaaatgagagattgacacacaaaccaaagcaata 2575774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 7632378 - 7632445
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    ||||||| ||||  ||||||||||||||| |||  |||||||  | ||||||||||||||||||||||    
T  7632378 tgacaacctttgcaacaaccaaaattttacaaataaaatgagtgattggcacaaaaatcaaagcaata 7632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 39606127 - 39606086
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatga 48  Q
    ||||||||||||  || |||||||||||||||||||||||||    
T  39606127 gtgacaacttttacgataaccaaaattttataaaggaaatga 39606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 39195211 - 39195143
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaatat 76  Q
    ||||||| ||||||| || |||| ||||| |||| |||||||| | ||||||| ||| |||||||||||    
T  39195211 tgacaacatttgtgataatcaaagttttacaaagaaaatgagagattggcacacaaaccaaagcaatat 39195143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 51255901 - 51255834
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||| |  |||||||||| ||||| |||| || | ||| ||||||||||||||||||||||||    
T  51255901 gtgacaacttgttggacaaccaaa-ttttacaaagaaatttagatagtggcacaaaaatcaaagcaata 51255834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 8822 - 8757
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaa 73  Q
    ||||||||||| ||||||||||||||||| ||||||||||||  |||| |||||||| ||||||||    
T  8822 tgacaacttttatgacaaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaagcaa 8757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 49450 - 49388
Alignment:
Q  7 gtgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaa 69  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  |||| |||||||| ||||    
T  49450 gtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtagtgacacaaaaaccaaa 49388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 11936 - 11869
Alignment:
Q  8 tgacaacttttgtgacaaccaaaattttataaaggaaatgagacagtggcacaaaaatcaaagcaata 75  Q
    |||||||||||||||| |||||||||||| |||| |||||||  | || |||||||| ||||||||||    
T  11936 tgacaacttttgtgacgaccaaaattttacaaagaaaatgaggtattgacacaaaaaccaaagcaata 11869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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