View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1242_low_172 (Length: 208)
Name: NF1242_low_172
Description: NF1242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1242_low_172 |
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Alignment Details
Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 35629688 - 35629798
Alignment:
| Q |
81 |
ggtgggtagataatactggagagggtgtacatgcaaagacc-------tcgctcaaggtggatgttatgattagaatgagcataccttgttaggttgtga |
173 |
Q |
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| T |
35629688 |
ggtgggttgataacaatggagagggtgtacatgcaaagaccctgacgctcgctcaaggtggatgttatgattagaatgagcataccttgttaggttgtga |
35629787 |
T |
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| Q |
174 |
ggcgagactta |
184 |
Q |
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| T |
35629788 |
ggcgagactta |
35629798 |
T |
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