View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1242_low_49 (Length: 354)
Name: NF1242_low_49
Description: NF1242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1242_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 4e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 79 - 258
Target Start/End: Original strand, 6032403 - 6032582
Alignment:
| Q |
79 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
178 |
Q |
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| T |
6032403 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
6032502 |
T |
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| Q |
179 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttct |
258 |
Q |
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| T |
6032503 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttct |
6032582 |
T |
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