View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12430_high_12 (Length: 306)
Name: NF12430_high_12
Description: NF12430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12430_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 27 - 305
Target Start/End: Original strand, 21697675 - 21697959
Alignment:
| Q |
27 |
ctatggagataatgtggcattttcatgcgtgggggacaagcaagaggaaaagtgtagcattccatactcaatacttttcttgcatgagg---aggacaca |
123 |
Q |
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| T |
21697675 |
ctatggagataatgtggcatcttcatgcgtgggggacaagcaagaggaaaagtgtagcattccatactcaatacttttcttgcatgaggaggaggacaca |
21697774 |
T |
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| Q |
124 |
cactagactcttctttccttcactgtttatattttttctttagtggttttagaataacttcaatcaaacatataaagatactgcaacattgagtgcatgc |
223 |
Q |
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| T |
21697775 |
cactagactattctttccttcactgtttatactttttctttagtggttttagaataacttcaatcaaacatataaagatactgctacatttagtgcaggt |
21697874 |
T |
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| Q |
224 |
caatcatgcattggttaaag---tattaataaaccagaaataaaccataaaattaagaaaactctgttgtatctataaggaaaaa |
305 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
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| T |
21697875 |
caatcatgcattggttaaagtattattaataaaccagaaataaaccataaaataaagaaaactctgtggtatctataaggaaaaa |
21697959 |
T |
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