View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12431_low_2 (Length: 606)

Name: NF12431_low_2
Description: NF12431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12431_low_2
NF12431_low_2
[»] chr5 (35 HSPs)
chr5 (1-248)||(42450220-42450468)
chr5 (372-591)||(42449934-42450156)
chr5 (463-574)||(10827031-10827142)
chr5 (465-548)||(36759191-36759274)
chr5 (461-546)||(43294194-43294279)
chr5 (372-437)||(14487574-14487639)
chr5 (404-439)||(15978726-15978761)
chr5 (463-513)||(26747694-26747744)
chr5 (396-437)||(21017647-21017688)
chr5 (462-574)||(27014608-27014720)
chr5 (393-437)||(2411332-2411376)
chr5 (462-570)||(19877038-19877146)
chr5 (393-437)||(33729791-33729835)
chr5 (393-437)||(33800906-33800950)
chr5 (462-513)||(1973346-1973397)
chr5 (404-439)||(2029177-2029212)
chr5 (463-510)||(11822236-11822283)
chr5 (372-435)||(32158431-32158494)
chr5 (463-510)||(42346474-42346521)
chr5 (403-437)||(10508593-10508627)
chr5 (393-435)||(20945929-20945971)
chr5 (372-437)||(18478016-18478081)
chr5 (372-437)||(18872534-18872599)
chr5 (372-437)||(19059021-19059086)
chr5 (396-437)||(29050813-29050854)
chr5 (396-437)||(36888134-36888175)
chr5 (372-437)||(42455411-42455476)
chr5 (393-437)||(843406-843450)
chr5 (393-437)||(973014-973058)
chr5 (393-437)||(9577315-9577359)
chr5 (393-429)||(20735213-20735249)
chr5 (393-437)||(26169050-26169094)
chr5 (395-439)||(27219603-27219647)
chr5 (404-436)||(39760088-39760120)
chr5 (393-437)||(40339137-40339181)
[»] chr1 (37 HSPs)
chr1 (463-574)||(27109046-27109157)
chr1 (462-571)||(31385307-31385416)
chr1 (463-591)||(42465761-42465889)
chr1 (463-548)||(21761277-21761362)
chr1 (331-437)||(4429451-4429564)
chr1 (497-575)||(15291184-15291262)
chr1 (393-437)||(11802058-11802102)
chr1 (393-437)||(20357473-20357517)
chr1 (393-437)||(20562438-20562482)
chr1 (464-548)||(37770195-37770279)
chr1 (495-570)||(13706118-13706193)
chr1 (463-510)||(46191749-46191796)
chr1 (463-509)||(12789645-12789691)
chr1 (393-439)||(46116212-46116258)
chr1 (463-572)||(28861925-28862034)
chr1 (473-574)||(36361364-36361465)
chr1 (393-437)||(4354143-4354187)
chr1 (531-591)||(15292733-15292793)
chr1 (393-437)||(15368818-15368862)
chr1 (393-437)||(15774350-15774394)
chr1 (393-437)||(23464024-23464068)
chr1 (462-510)||(45423337-45423385)
chr1 (463-543)||(45471404-45471484)
chr1 (393-436)||(17056918-17056961)
chr1 (395-437)||(42831960-42832002)
chr1 (393-435)||(49916455-49916497)
chr1 (393-434)||(44803243-44803284)
chr1 (393-437)||(749624-749668)
chr1 (462-546)||(7402842-7402925)
chr1 (393-437)||(23930582-23930626)
chr1 (393-437)||(36164675-36164719)
chr1 (463-574)||(36791505-36791616)
chr1 (397-437)||(37490903-37490943)
chr1 (393-437)||(38019986-38020030)
chr1 (393-437)||(49010738-49010782)
chr1 (393-437)||(49251433-49251477)
chr1 (393-437)||(49606736-49606780)
[»] chr8 (42 HSPs)
chr8 (463-572)||(44119373-44119482)
chr8 (464-572)||(5772789-5772897)
chr8 (458-572)||(16583185-16583299)
chr8 (372-437)||(5184904-5184969)
chr8 (461-509)||(602942-602990)
chr8 (463-574)||(6253302-6253413)
chr8 (372-435)||(7649544-7649606)
chr8 (462-513)||(26701828-26701879)
chr8 (462-509)||(32473178-32473225)
chr8 (393-439)||(35556424-35556470)
chr8 (393-437)||(9524970-9525014)
chr8 (393-437)||(15042403-15042447)
chr8 (393-437)||(24608521-24608565)
chr8 (393-437)||(39484408-39484452)
chr8 (393-437)||(43847715-43847759)
chr8 (393-437)||(43875015-43875059)
chr8 (393-437)||(44136315-44136359)
chr8 (456-511)||(17443368-17443423)
chr8 (398-437)||(28465631-28465670)
chr8 (370-437)||(42688069-42688136)
chr8 (393-439)||(10184839-10184885)
chr8 (395-437)||(10970279-10970321)
chr8 (393-435)||(25119223-25119265)
chr8 (453-510)||(33074861-33074918)
chr8 (463-513)||(45120754-45120804)
chr8 (461-542)||(233927-234008)
chr8 (461-542)||(710338-710419)
chr8 (461-542)||(747550-747631)
chr8 (461-542)||(871445-871526)
chr8 (462-543)||(6253584-6253665)
chr8 (464-509)||(20495566-20495611)
chr8 (404-437)||(24074519-24074552)
chr8 (370-431)||(30942614-30942675)
chr8 (393-437)||(41225702-41225747)
chr8 (404-437)||(43763327-43763360)
chr8 (393-437)||(4798579-4798623)
chr8 (393-437)||(8740694-8740738)
chr8 (393-437)||(10199780-10199824)
chr8 (393-437)||(17980295-17980339)
chr8 (393-437)||(25689426-25689470)
chr8 (461-513)||(26702911-26702963)
chr8 (393-437)||(43468743-43468787)
[»] chr6 (22 HSPs)
chr6 (463-574)||(31858443-31858555)
chr6 (372-437)||(34365748-34365813)
chr6 (393-437)||(9491773-9491817)
chr6 (393-437)||(15288993-15289037)
chr6 (393-437)||(9438315-9438359)
chr6 (393-437)||(18904721-18904765)
chr6 (393-437)||(18991497-18991541)
chr6 (463-574)||(5613795-5613906)
chr6 (404-439)||(21507250-21507285)
chr6 (463-510)||(31860741-31860788)
chr6 (393-431)||(22983599-22983637)
chr6 (393-431)||(23804771-23804809)
chr6 (464-510)||(26839274-26839320)
chr6 (372-441)||(753329-753398)
chr6 (372-437)||(10377141-10377206)
chr6 (404-437)||(20716441-20716474)
chr6 (372-432)||(6270626-6270686)
chr6 (393-437)||(12089110-12089154)
chr6 (393-437)||(19165364-19165408)
chr6 (465-513)||(22868432-22868480)
chr6 (403-435)||(26598641-26598673)
chr6 (405-437)||(31741513-31741545)
[»] chr4 (43 HSPs)
chr4 (463-548)||(43036466-43036551)
chr4 (460-570)||(32715266-32715376)
chr4 (372-437)||(33944380-33944445)
chr4 (463-545)||(2333822-2333904)
chr4 (487-574)||(49815732-49815819)
chr4 (463-512)||(1593855-1593904)
chr4 (461-510)||(17931082-17931131)
chr4 (372-437)||(20955511-20955576)
chr4 (393-438)||(44975920-44975965)
chr4 (372-429)||(48501675-48501732)
chr4 (393-437)||(548925-548969)
chr4 (393-437)||(3442856-3442900)
chr4 (393-437)||(6053993-6054037)
chr4 (393-437)||(20753163-20753207)
chr4 (528-568)||(20855733-20855773)
chr4 (462-510)||(31433773-31433821)
chr4 (393-437)||(47017984-47018028)
chr4 (531-574)||(31302352-31302395)
chr4 (463-574)||(43035767-43035878)
chr4 (393-435)||(9285697-9285739)
chr4 (393-439)||(35112719-35112765)
chr4 (468-510)||(50910227-50910269)
chr4 (393-435)||(52560779-52560821)
chr4 (528-574)||(55741433-55741479)
chr4 (393-435)||(56546487-56546529)
chr4 (463-516)||(11284241-11284294)
chr4 (396-437)||(16201309-16201350)
chr4 (406-435)||(23376199-23376228)
chr4 (404-437)||(43115281-43115314)
chr4 (393-437)||(3465596-3465640)
chr4 (405-437)||(5430415-5430447)
chr4 (393-437)||(9172409-9172453)
chr4 (463-575)||(17482668-17482780)
chr4 (393-437)||(17859791-17859835)
chr4 (395-439)||(18136428-18136472)
chr4 (393-437)||(20181224-20181268)
chr4 (393-429)||(29269353-29269389)
chr4 (393-437)||(34773721-34773765)
chr4 (393-437)||(43142516-43142560)
chr4 (393-437)||(47416481-47416525)
chr4 (395-439)||(49123636-49123680)
chr4 (393-437)||(53698018-53698062)
chr4 (393-429)||(53815717-53815753)
[»] chr3 (35 HSPs)
chr3 (462-525)||(37459727-37459790)
chr3 (463-574)||(8262722-8262833)
chr3 (372-437)||(49639041-49639106)
chr3 (393-437)||(13540002-13540046)
chr3 (393-437)||(33206770-33206814)
chr3 (463-574)||(30715874-30715985)
chr3 (528-575)||(44809852-44809899)
chr3 (393-439)||(45713491-45713537)
chr3 (463-516)||(42329090-42329143)
chr3 (372-437)||(54295219-54295284)
chr3 (393-437)||(20244147-20244191)
chr3 (393-437)||(34136776-34136820)
chr3 (530-574)||(40469187-40469231)
chr3 (461-548)||(44846954-44847041)
chr3 (393-435)||(14417883-14417925)
chr3 (463-513)||(33942758-33942808)
chr3 (528-574)||(37222775-37222821)
chr3 (463-513)||(51545241-51545291)
chr3 (463-516)||(12515327-12515380)
chr3 (392-437)||(34503228-34503273)
chr3 (372-437)||(53467962-53468026)
chr3 (404-436)||(13616123-13616155)
chr3 (372-436)||(17439982-17440046)
chr3 (393-437)||(19540354-19540398)
chr3 (393-437)||(23820642-23820686)
chr3 (393-437)||(24751298-24751342)
chr3 (393-437)||(35849317-35849361)
chr3 (393-437)||(39492834-39492878)
chr3 (393-437)||(42271051-42271095)
chr3 (393-437)||(43566834-43566878)
chr3 (462-574)||(44006394-44006505)
chr3 (393-437)||(49019196-49019240)
chr3 (393-437)||(49146097-49146141)
chr3 (393-429)||(52030142-52030178)
chr3 (462-574)||(55146561-55146673)
[»] scaffold0325 (1 HSPs)
scaffold0325 (462-574)||(2812-2924)
[»] scaffold0146 (3 HSPs)
scaffold0146 (461-548)||(29979-30065)
scaffold0146 (466-548)||(32321-32402)
scaffold0146 (463-574)||(24432-24543)
[»] chr7 (38 HSPs)
chr7 (464-522)||(27870294-27870352)
chr7 (463-509)||(20708207-20708253)
chr7 (463-509)||(20876251-20876297)
chr7 (395-437)||(22706068-22706110)
chr7 (462-548)||(47317779-47317865)
chr7 (372-437)||(25818299-25818364)
chr7 (393-437)||(27047753-27047797)
chr7 (461-509)||(47944421-47944469)
chr7 (461-509)||(47949851-47949899)
chr7 (402-437)||(36176884-36176919)
chr7 (370-437)||(46716346-46716413)
chr7 (393-435)||(2261522-2261564)
chr7 (393-439)||(17900917-17900963)
chr7 (393-435)||(24479598-24479640)
chr7 (463-509)||(27030639-27030685)
chr7 (393-431)||(30699821-30699859)
chr7 (399-437)||(31279350-31279388)
chr7 (463-513)||(47863781-47863831)
chr7 (463-504)||(1299107-1299148)
chr7 (499-572)||(3614417-3614490)
chr7 (404-437)||(14967683-14967716)
chr7 (404-437)||(15397159-15397192)
chr7 (372-437)||(25711148-25711213)
chr7 (372-437)||(30152754-30152819)
chr7 (372-437)||(36315991-36316056)
chr7 (393-437)||(924330-924374)
chr7 (393-437)||(7263036-7263080)
chr7 (393-437)||(8195928-8195972)
chr7 (393-437)||(23685592-23685636)
chr7 (397-437)||(27907938-27907978)
chr7 (393-433)||(27957635-27957675)
chr7 (405-437)||(29710150-29710182)
chr7 (393-437)||(30644182-30644226)
chr7 (393-437)||(35368409-35368453)
chr7 (463-571)||(41964757-41964865)
chr7 (393-437)||(44437863-44437907)
chr7 (393-437)||(46918994-46919038)
chr7 (393-437)||(47552226-47552270)
[»] chr2 (47 HSPs)
chr2 (331-438)||(4157624-4157732)
chr2 (393-437)||(31956879-31956923)
chr2 (463-574)||(34456935-34457046)
chr2 (393-435)||(18386850-18386892)
chr2 (463-575)||(22712155-22712267)
chr2 (393-437)||(20122513-20122557)
chr2 (372-439)||(24034070-24034137)
chr2 (462-572)||(31184430-31184539)
chr2 (528-574)||(30497779-30497825)
chr2 (463-509)||(31854267-31854313)
chr2 (393-435)||(36426894-36426936)
chr2 (463-509)||(42683466-42683512)
chr2 (462-570)||(13329743-13329851)
chr2 (403-436)||(18209992-18210025)
chr2 (396-437)||(38820588-38820629)
chr2 (393-437)||(580821-580865)
chr2 (393-437)||(8234830-8234874)
chr2 (393-437)||(9547165-9547209)
chr2 (463-574)||(19507798-19507909)
chr2 (393-437)||(22297490-22297534)
chr2 (393-437)||(22538552-22538596)
chr2 (462-570)||(31204153-31204261)
chr2 (393-437)||(32943352-32943396)
chr2 (393-437)||(36520818-36520862)
chr2 (393-436)||(17154663-17154706)
chr2 (372-431)||(32891618-32891677)
chr2 (370-437)||(39726450-39726516)
chr2 (395-437)||(18007262-18007304)
chr2 (393-435)||(37245393-37245435)
chr2 (372-429)||(10026173-10026230)
chr2 (464-513)||(17112305-17112354)
chr2 (410-439)||(17119473-17119502)
chr2 (458-539)||(31173376-31173457)
chr2 (372-437)||(32988363-32988428)
chr2 (464-513)||(34519902-34519951)
chr2 (372-437)||(36665443-36665508)
chr2 (460-492)||(1481053-1481085)
chr2 (393-437)||(2114473-2114517)
chr2 (393-429)||(2304311-2304347)
chr2 (393-437)||(9791933-9791977)
chr2 (393-437)||(10262752-10262796)
chr2 (405-437)||(11727346-11727378)
chr2 (393-437)||(26807122-26807166)
chr2 (393-437)||(30474233-30474277)
chr2 (462-510)||(31298850-31298898)
chr2 (393-437)||(36481082-36481126)
chr2 (393-437)||(45523678-45523722)
[»] scaffold1990 (1 HSPs)
scaffold1990 (393-435)||(909-951)
[»] scaffold0092 (1 HSPs)
scaffold0092 (393-435)||(47355-47397)
[»] scaffold0343 (1 HSPs)
scaffold0343 (393-438)||(8572-8617)
[»] scaffold0039 (1 HSPs)
scaffold0039 (487-574)||(106785-106872)
[»] scaffold0062 (1 HSPs)
scaffold0062 (393-434)||(7056-7097)
[»] scaffold0008 (1 HSPs)
scaffold0008 (372-437)||(43714-43778)
[»] scaffold0004 (1 HSPs)
scaffold0004 (461-510)||(130565-130614)
[»] scaffold0036 (1 HSPs)
scaffold0036 (393-429)||(25047-25083)
[»] scaffold0006 (1 HSPs)
scaffold0006 (393-437)||(159027-159071)


Alignment Details
Target: chr5 (Bit Score: 182; Significance: 4e-98; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 42450468 - 42450220
Alignment:
Q  1 cacttacttgcagcctttgtttcagacttgtgtttaagggagaagttgctaaagctggannnnnnnnnnnnnnnnatatatgtttttgcaaacataaaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||    
T  42450468 cacttacttgcagcctttgtttcagacttgtgtttaagggagaagttgctaaagctggacttttttttttgttt-atatatgtttttgcaaacataaaag 42450370  T
Q  101 tatataaaatcattggtgagattctgtttaaaaataaatgatcaaatatttaagagattcttaattagtatgatttcttactaaaattaggtgactacgt 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42450369 tatataaaatcattggtgagattctatttaaaaataaatgatcaaatatttaagagattcttaattagtatgatttcttactaaaattaggtgactacgt 42450270  T
Q  201 tccagagaaagaa--tctcaatcaaaccgtaatttgtgttatttggtaga 248  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42450269 tccagagaaagaatctctcaatcaaaccgtaatttgtgttatttggtaga 42450220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 372 - 591
Target Start/End: Complemental strand, 42450156 - 42449934
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaacta---aaccacatctctctttaatataatgaaaat 468  Q
    ||||||| | ||||| | || |||||| ||||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  42450156 aataagtagggtatttagggttcgaactccagcccctacatataataatgcattgtcctaccaacaactgaaccacatctctctttaatataatgaaaat 42450057  T
Q  469 tgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaact 568  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||    
T  42450056 tgtttttttgacataagaaacttcacattgacacaagcaaattacgttaaggcccttagcggtagttaactaccgttgagaaaaccgccggcagttaact 42449957  T
Q  569 gccgctacattctgtatcttaag 591  Q
    |||| | ||||||||||||||||    
T  42449956 gccgttgcattctgtatcttaag 42449934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 463 - 574
Target Start/End: Complemental strand, 10827142 - 10827031
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||    
T  10827142 gaaaattgcttttttgacatgagaaacttcatattgacacaagtaaattacgttagggcccctggcggtagttaactaccgttgagaaaaccgccggtag 10827043  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  10827042 ttaactgccgct 10827031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 548
Target Start/End: Complemental strand, 36759274 - 36759191
Alignment:
Q  465 aaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| | || |||||   |||||||||||||||||||||    
T  36759274 aaattgcttttttgacataaaaaacttcacattgacacaagtaaaatacctgaatgcccccagcggtagttaactaccgttgag 36759191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 43294194 - 43294279
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttg 546  Q
    |||||||||| ||||||||||||  |||||||| |  |||||||||||| |||||||| ||| ||  |||||||||||||||||||    
T  43294194 atgaaaattgtttttttgacatagaaaacttcataaagacacaagtaaaatacgttaatgcctctagcggtagttaactaccgttg 43294279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 14487639 - 14487574
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||| | ||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  14487639 aataagtgggatatccgaggttcgaaccccaacccctacatataataatgcattgtcctaccaact 14487574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 439
Target Start/End: Original strand, 15978726 - 15978761
Alignment:
Q  404 cccctacatataataatacattgtcctaccaactaa 439  Q
    ||||||||||||||||||||||||||||||||||||    
T  15978726 cccctacatataataatacattgtcctaccaactaa 15978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 26747694 - 26747744
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||| ||||    
T  26747694 gaaaattgcttttttgacataggaaacttcctattgacacaagtaatttac 26747744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 21017647 - 21017688
Alignment:
Q  396 aaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  21017647 aaccccagccactacatataataatgcattgtcctaccaact 21017688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 574
Target Start/End: Complemental strand, 27014720 - 27014608
Alignment:
Q  462 tgaaaattgcttttttgacataagaa-acttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggc 560  Q
    |||||||||||||||||||| | ||| | |||  ||| |||||| ||||| ||||||| | ||||  |||||||||||||||||||  | ||||| || |    
T  27014720 tgaaaattgcttttttgaca-atgaatatttcctattaacacaattaaatgacgttaatgtccctagcggtagttaactaccgttggaagaaccgccgac 27014622  T
Q  561 agttaactgccgct 574  Q
    ||||||||||||||    
T  27014621 agttaactgccgct 27014608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 2411332 - 2411376
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||| ||||||||||||||||||||||||||||    
T  2411332 tcgaactccggcccctgcatataataatacattgtcctaccaact 2411376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 570
Target Start/End: Complemental strand, 19877146 - 19877038
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    |||||||||||||| ||||||   ||| |||  ||||||||||||||||||| | || |||| |  | |||||||||||||||  || |||| |||||||    
T  19877146 tgaaaattgcttttctgacattgaaaagttccaattgacacaagtaaattacttaaacgcccataccagtagttaactaccgtacagcaaactgtcggca 19877047  T
Q  562 gttaactgc 570  Q
     ||||||||    
T  19877046 tttaactgc 19877038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 33729835 - 33729791
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  33729835 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 33729791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 33800950 - 33800906
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  33800950 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 33800906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 513
Target Start/End: Complemental strand, 1973397 - 1973346
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||||||||||||  | |||||| |||||||||||||| ||||    
T  1973397 tgaaaattgcttttttgacatataatacttcatattgacacaagtaatttac 1973346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 439
Target Start/End: Original strand, 2029177 - 2029212
Alignment:
Q  404 cccctacatataataatacattgtcctaccaactaa 439  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2029177 cccctgcatataataatacattgtcctaccaactaa 2029212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 510
Target Start/End: Complemental strand, 11822283 - 11822236
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    ||||||||||||| |||||||  |||||||||| ||||||||||||||    
T  11822283 gaaaattgcttttctgacatagaaaacttcacaatgacacaagtaaat 11822236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 435
Target Start/End: Original strand, 32158431 - 32158494
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||| || |||  || ||||||||| |||||| ||||||||||| ||||||||||||||    
T  32158431 aataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaa 32158494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 510
Target Start/End: Complemental strand, 42346521 - 42346474
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    ||||||||||||| ||||||| ||||||||  ||||||||||||||||    
T  42346521 gaaaattgcttttctgacataggaaacttcttattgacacaagtaaat 42346474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 437
Target Start/End: Complemental strand, 10508627 - 10508593
Alignment:
Q  403 gcccctacatataataatacattgtcctaccaact 437  Q
    |||||| ||||||||||||||||||||||||||||    
T  10508627 gcccctgcatataataatacattgtcctaccaact 10508593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 20945929 - 20945971
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||    
T  20945929 tcgaaccccggcccctgcatataataatgcattgtcctaccaa 20945971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 18478081 - 18478016
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | || || ||||||||| |||||  ||||||||||| ||||||||||||||||    
T  18478081 aataagtggggtgtccagggttcgaaccccggccccagcatataataatgcattgtcctaccaact 18478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 18872599 - 18872534
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || |||  || |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  18872599 aataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcctaccaact 18872534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 19059021 - 19059086
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | || || ||||||||| |||||| ||||| ||||| ||||||||||||||||    
T  19059021 aataagtggggtgtccagggttcgaaccccggcccctgcatatgataatgcattgtcctaccaact 19059086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 29050854 - 29050813
Alignment:
Q  396 aaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| |||||| ||||||||||| ||||||||||||||||    
T  29050854 aaccccggcccctgcatataataatgcattgtcctaccaact 29050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 36888134 - 36888175
Alignment:
Q  396 aaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| |||||| ||||||||||| ||||||||||||||||    
T  36888134 aaccccggcccctgcatataataatgcattgtcctaccaact 36888175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 42455411 - 42455476
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||| | |  || |||||| || |||||| ||||||||||| ||||||||||||||||    
T  42455411 aataagtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaact 42455476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 843406 - 843450
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||||||| ||||||| ||||||||    
T  843406 tcgaaccccgtcccctacatataataatgcattgtcataccaact 843450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 973014 - 973058
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| ||||||  |||||||||| ||||||||||||||||    
T  973014 tcgaaccccggcccctgtatataataatgcattgtcctaccaact 973058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 9577359 - 9577315
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||| | ||||||||||| ||||||||||||||||    
T  9577359 tcgaaccccggcccatgcatataataatgcattgtcctaccaact 9577315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 20735213 - 20735249
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcc 429  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  20735213 tcgaaccccggcccctacatataataatgcattgtcc 20735249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 26169050 - 26169094
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| ||| ||||| ||||||||||| ||||||||||||||||    
T  26169050 tcgaactccaacccctgcatataataatgcattgtcctaccaact 26169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 27219603 - 27219647
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    ||||||| |||| | ||||||||||| ||||||||||||||||||    
T  27219603 gaaccccggcccatgcatataataatgcattgtcctaccaactaa 27219647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 39760120 - 39760088
Alignment:
Q  404 cccctacatataataatacattgtcctaccaac 436  Q
    ||||| |||||||||||||||||||||||||||    
T  39760120 cccctgcatataataatacattgtcctaccaac 39760088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 40339137 - 40339181
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  40339137 tcgaaccccggcccctgcatataataatgcattgtcctactaact 40339181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 463 - 574
Target Start/End: Complemental strand, 27109157 - 27109046
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  27109157 gaaaattgcttttttgacatgagaaacttcacattcacacaagtaaattacgttagggcccctgacagtagttaactaccgttgagaaaaccgccggcag 27109058  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  27109057 ttaactgccgct 27109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 462 - 571
Target Start/End: Original strand, 31385307 - 31385416
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| || ||    
T  31385307 tgaaaattgcttttttgacatgagaaacttcacattgacacaagtaaattacgttagggtccctggcggtagttaactaccgttgagaaaaccgccgaca 31385406  T
Q  562 gttaactgcc 571  Q
    ||||||||||    
T  31385407 gttaactgcc 31385416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 463 - 591
Target Start/End: Complemental strand, 42465889 - 42465761
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||  |||||||||||||||||||||| ||  |||||    
T  42465889 gaaaattacttttttgacatgagaaacttcacattgacacaagtaaattacgttagggcctctgacattagttaactaccgttgagaaaatcggtggcag 42465790  T
Q  563 ttaactgccgctacattctgtatcttaag 591  Q
    ||||||| || | ||||||||||||||||    
T  42465789 ttaactgtcgttgcattctgtatcttaag 42465761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 21761277 - 21761362
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| ||  | || ||||||  |||||||||||||||||||||    
T  21761277 gaaaattgcttttttgacataaaaaacttcacattgacaaaagtaaaatatctaaatgcccctagcggtagttaactaccgttgag 21761362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 437
Target Start/End: Original strand, 4429451 - 4429564
Alignment:
Q  331 ttttattttatcagatagtctggtagttagaattcacctta-------aataagtggagtattcaaggctcgaaccccagcccctacatataataataca 423  Q
    |||| |||| ||||||||||| || | ||||||||||||||       |||||||||| | |||| || |||||||||| ||||| ||||||||||| ||    
T  4429451 tttttttttgtcagatagtctagtggctagaattcaccttataagatgaataagtggaatgttcagggttcgaaccccaacccctgcatataataatgca 4429550  T
Q  424 ttgtcctaccaact 437  Q
    ||||||||||||||    
T  4429551 ttgtcctaccaact 4429564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 497 - 575
Target Start/End: Original strand, 15291184 - 15291262
Alignment:
Q  497 tgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaactgccgcta 575  Q
    ||||||||||||||||| | || |||||  |||||||||||||||||||  | |||||| || ||||||||||||||||    
T  15291184 tgacacaagtaaattacttaaacgcccccaacggtagttaactaccgttctgcaaaccgccgacagttaactgccgcta 15291262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 11802058 - 11802102
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  11802058 tcgaaccccaacccctacatataataatgcattgtcctaccaact 11802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 20357517 - 20357473
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  20357517 tcgaaccccagcccctgcatataataatgcattgtcctaccaact 20357473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 20562438 - 20562482
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  20562438 tcgaaccccagcccctgcatataataatgcattgtcctaccaact 20562482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 548
Target Start/End: Original strand, 37770195 - 37770279
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    |||||| |||||||||||||| ||||||| || ||||||| ||||| ||| | || |||||  |||||||||||||| |||||||    
T  37770195 aaaattacttttttgacataaaaaacttcgcaatgacacacgtaaaatacttaaatgcccccaacggtagttaactatcgttgag 37770279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 495 - 570
Target Start/End: Original strand, 13706118 - 13706193
Alignment:
Q  495 attgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaactgc 570  Q
    |||||||||||||| ||||   || |||||  |||||||||||||||||||| |||||||| || |||||||||||    
T  13706118 attgacacaagtaatttactaaaaagcccccaacggtagttaactaccgttgggaaaaccgccgacagttaactgc 13706193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 510
Target Start/End: Original strand, 46191749 - 46191796
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    ||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  46191749 gaaaattgcttttctgacataagaaacttcctattgacacaagtaaat 46191796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 509
Target Start/End: Original strand, 12789645 - 12789691
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  12789645 gaaaattgcttttctgacataggaaacttcacaatgacacaagtaaa 12789691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 46116212 - 46116258
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  46116212 tcgaaccccagcccctgcatatgataatgcattgtcctaccaactaa 46116258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 572
Target Start/End: Original strand, 28861925 - 28862034
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||||||||||||| | | |||||  |||||||||||||| ||||   || || |||  ||| |||||||| ||||||  | ||||| ||||||    
T  28861925 gaaaattgcttttttgacatgaaatacttcctattgacacaagtaatttactaaaaagctcctagcggcagttaacttccgttggaagaaccgccggcag 28862024  T
Q  563 ttaactgccg 572  Q
    ||||||||||    
T  28862025 ttaactgccg 28862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 473 - 574
Target Start/End: Complemental strand, 36361465 - 36361364
Alignment:
Q  473 tttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaactgccg 572  Q
    ||||| |||||  |||||||| |  |||||||||||| |||||||| | |||||  || ||||||||| |||||  | |||||||| |||||||||||||    
T  36361465 tttttaacatagaaaacttcataaagacacaagtaaaatacgttaatgtccctggtgggagttaactatcgttggaagaaccgtcgacagttaactgccg 36361366  T
Q  573 ct 574  Q
    ||    
T  36361365 ct 36361364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 4354143 - 4354187
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  4354143 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 4354187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 531 - 591
Target Start/End: Complemental strand, 15292793 - 15292733
Alignment:
Q  531 tagttaactaccgttgagaaaaccgtcggcagttaactgccgctacattctgtatcttaag 591  Q
    |||||||||||||||| | |||||| | |||||||||||||| | |||||||||| |||||    
T  15292793 tagttaactaccgttggggaaaccgccagcagttaactgccgttgcattctgtatgttaag 15292733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 15368862 - 15368818
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  15368862 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 15368818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 15774350 - 15774394
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||    
T  15774350 tcgaaccccgacccctacatataataatgcattgtcctaccaact 15774394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 23464024 - 23464068
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  23464024 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 23464068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 45423385 - 45423337
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    |||||||||||||| |||||| | ||| |||||||||||||||||||||    
T  45423385 tgaaaattgcttttctgacatcaaaaagttcacattgacacaagtaaat 45423337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 543
Target Start/End: Original strand, 45471404 - 45471484
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccg 543  Q
    |||||||||||||||||||||  |||||||| |  |||| ||||||| |||||| | |||||   ||||||||||||||||    
T  45471404 gaaaattgcttttttgacatagaaaacttcataaagacataagtaaaatacgtttatgcccccagcggtagttaactaccg 45471484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Original strand, 17056918 - 17056961
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaac 436  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||    
T  17056918 tcgaaccccggcccctgcatataataatgcattgtcctaccaac 17056961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 42832002 - 42831960
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||| ||||||||||| || |||||||||||||    
T  42832002 gaaccccagcccctgcatataataatgcaatgtcctaccaact 42831960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 49916497 - 49916455
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||  ||||||||||||||||| ||||||||||||||    
T  49916497 tcgaaccccgacccctacatataataatgcattgtcctaccaa 49916455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 44803284 - 44803243
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctacca 434  Q
    |||||| |||||||| |||||||||||| |||||||||||||    
T  44803284 tcgaactccagccccaacatataataatgcattgtcctacca 44803243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 749624 - 749668
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||||||||||||||| |||||| | |||||||    
T  749624 tcgaaccccaacccctacatataataatgcattgttcgaccaact 749668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 546
Target Start/End: Original strand, 7402842 - 7402925
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttg 546  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||| ||||   || ||||||   |||||||||| |||||||    
T  7402842 tgaaaattgcttttttgacataggaaacttcctattgaca-aagtaatttactaaaaagcccctagtggtagttaacaaccgttg 7402925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 23930582 - 23930626
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  23930582 tcgaaccccgacccctgcatataataatgcattgtcctaccaact 23930626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 36164719 - 36164675
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||| ||||||||||||| |||| |||||||||||    
T  36164719 tcgaaccccaacccttacatataataatgcattatcctaccaact 36164675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 574
Target Start/End: Complemental strand, 36791616 - 36791505
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgtta-aggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    |||||||||| || |||| | | |||| ||| ||||||||||| ||||||| ||| || |||| | || |||||||||||||||| |  ||||| | |||    
T  36791616 gaaaattgctcttctgacttcaaaaacgtcatattgacacaagaaaattaccttatagtccccagccg-tagttaactaccgttgggctaaccggcagca 36791518  T
Q  562 gttaactgccgct 574  Q
    |||||||||||||    
T  36791517 gttaactgccgct 36791505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Complemental strand, 37490943 - 37490903
Alignment:
Q  397 accccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  37490943 accccggcccctgcatataataatgcattgtcctaccaact 37490903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 38019986 - 38020030
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||| ||||||||||| ||||||||||||||||    
T  38019986 tcgaactccggcccctgcatataataatgcattgtcctaccaact 38020030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 49010738 - 49010782
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| | | | ||||||||||||||||||||||||||||    
T  49010738 tcgaaccccaactcatgcatataataatacattgtcctaccaact 49010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 49251433 - 49251477
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  49251433 tcgaaccccgacccctgcatataataatgcattgtcctaccaact 49251477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 49606736 - 49606780
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||||||||||||||| |||||||||| |||||    
T  49606736 tcgaactccggcccctacatataataatgcattgtcctaacaact 49606780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 463 - 572
Target Start/End: Complemental strand, 44119482 - 44119373
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||| ||||||||||||||| ||||  |||||||||||||    
T  44119482 gaaaattgcttttttgacataagaaatttcacattgccacaagtaaattacgttggggcccctggcggtagttaactaccattgaagaaaccgtcggcag 44119383  T
Q  563 ttaactgccg 572  Q
    ||||||||||    
T  44119382 ttaactgccg 44119373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 572
Target Start/End: Original strand, 5772789 - 5772897
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagt 563  Q
    ||||||||||||||||||||| |||| ||| |  ||||||| |||| |||||||| |||| | |||||||||||||||| |||  | ||||||||| |||    
T  5772789 aaaattgcttttttgacataaaaaacctcataaagacacaaataaaatacgttaatgcccttaacggtagttaactaccattggtagaaccgtcggtagt 5772888  T
Q  564 taactgccg 572  Q
    |||||||||    
T  5772889 taactgccg 5772897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 16583185 - 16583299
Alignment:
Q  458 ataatgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtc 557  Q
    |||| ||||||||||||||||||||   | |||||  |||||||||||||| ||||   || |||||   ||||||||||||||||||| |||||||| |    
T  16583185 ataaagaaaattgcttttttgacatggaatacttcctattgacacaagtaatttactaaaaagcccccagcggtagttaactaccgttgggaaaaccgcc 16583284  T
Q  558 ggcagttaactgccg 572  Q
    | |||||||||||||    
T  16583285 gacagttaactgccg 16583299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 5184904 - 5184969
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | || || |||||||||||||||| ||||||||||| ||||||||||||||||    
T  5184904 aataagtggggtgtccagggttcgaaccccagcccctgcatataataatccattgtcctaccaact 5184969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 509
Target Start/End: Original strand, 602942 - 602990
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  602942 atgaaaattgattttctgacataagaaacttcacaatgacacaagtaaa 602990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 6253302 - 6253413
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||||||||| | |||||  |||||||||| ||||||||||||| ||  | || |||||  ||||||||||||||||| ||  |||| || |  |||    
T  6253302 gaaaattgcttttctaacatagaaaacttcacaatgacacaagtaaaataattaaatgcccccaacggtagttaactaccgctggaaaaatcggcaacag 6253401  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  6253402 ttaactgccgct 6253413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 435
Target Start/End: Complemental strand, 7649606 - 7649544
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||| || ||| ||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  7649606 aataagtggggtgttcgaggttcgaaccccagccc-tacatataataatgcattgtcctaccaa 7649544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 513
Target Start/End: Original strand, 26701828 - 26701879
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||| ||||    
T  26701828 tgaaaattgcttttttgacataggaaacttcctattgacacaagtaatttac 26701879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 509
Target Start/End: Complemental strand, 32473225 - 32473178
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  32473225 tgaaaattgtttttttgacataaaaaacttcacatcgacacaagtaaa 32473178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 35556424 - 35556470
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||    
T  35556424 tcgaaccccaacccctacatatactaatgcattgtcctaccaactaa 35556470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 9525014 - 9524970
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  9525014 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 9524970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 15042403 - 15042447
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  15042403 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 15042447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 24608521 - 24608565
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  24608521 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 24608565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 39484408 - 39484452
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  39484408 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 39484452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 43847759 - 43847715
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  43847759 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 43847715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 43875015 - 43875059
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| |||||||||||||||||||| |||||||||| |||||    
T  43875015 tcgaacctcagcccctacatataataatgcattgtcctatcaact 43875059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 44136315 - 44136359
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||    
T  44136315 tcgaacctcagcccctgcatataataatatattgtcctaccaact 44136359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 511
Target Start/End: Complemental strand, 17443423 - 17443368
Alignment:
Q  456 atataatgaaaattgcttttttgacataagaaacttcacattgacacaagtaaatt 511  Q
    |||||| |||||||| |||| |||||||  |||||||||| |||||||||||||||    
T  17443423 atataaagaaaattgtttttctgacatagaaaacttcacaatgacacaagtaaatt 17443368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 28465670 - 28465631
Alignment:
Q  398 ccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  28465670 ccccagcccctgcatataataatgcattgtcctaccaact 28465631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 42688136 - 42688069
Alignment:
Q  370 taaataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||| || |||  || ||||| |||  ||||||||||||||||| ||||||||||||||||    
T  42688136 taaataagtggggtgttcggggttcgaatcccgacccctacatataataatgcattgtcctaccaact 42688069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 10184839 - 10184885
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  10184839 tcgaacctcagtccctacatataataatgcattgtcctaccatctaa 10184885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 10970321 - 10970279
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||| ||||||||||| |||| |||||||||||    
T  10970321 gaaccccagcccctgcatataataatgcattatcctaccaact 10970279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 25119265 - 25119223
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||    
T  25119265 tcgaaccccaacccctgcatataataatgcattgtcctaccaa 25119223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 510
Target Start/End: Complemental strand, 33074918 - 33074861
Alignment:
Q  453 ttaatataatgaaaattgcttttttgacataagaa-acttcacattgacacaagtaaat 510  Q
    ||||||||||||||||||||||||||||| | ||| | |||| ||||||||||||||||    
T  33074918 ttaatataatgaaaattgcttttttgaca-atgaatatttcatattgacacaagtaaat 33074861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Complemental strand, 45120804 - 45120754
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||| |||||||  ||| |||||| |||||||||||||||||    
T  45120804 gaaaattgcttttctgacatagaaaagttcacaatgacacaagtaaattac 45120754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 542
Target Start/End: Original strand, 233927 - 234008
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactacc 542  Q
    ||||||||||||||| ||| |||| |||||||| | ||||||||||||| ||| | || || | |  |||||||||||||||    
T  233927 atgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaactacc 234008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 542
Target Start/End: Original strand, 710338 - 710419
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactacc 542  Q
    ||||||||||||||| ||| |||| |||||||| | ||||||||||||| ||| | || || | |  |||||||||||||||    
T  710338 atgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaactacc 710419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 542
Target Start/End: Original strand, 747550 - 747631
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactacc 542  Q
    ||||||||||||||| ||| |||| |||||||| | ||||||||||||| ||| | || || | |  |||||||||||||||    
T  747550 atgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaactacc 747631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 542
Target Start/End: Original strand, 871445 - 871526
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactacc 542  Q
    ||||||||||||||| ||| |||| |||||||| | ||||||||||||| ||| | || || | |  |||||||||||||||    
T  871445 atgaaaattgcttttgtgatataaaaaacttcagaatgacacaagtaaaatacttaaatgctcttagcggtagttaactacc 871526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 6253665 - 6253584
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccg 543  Q
    |||||||||||||| | |||||  |||||||||| ||||||||||||| ||| | || | |||   ||||||||||||||||    
T  6253665 tgaaaattgcttttctaacatagaaaacttcacaatgacacaagtaaaatacttaaatgtcccccgcggtagttaactaccg 6253584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 509
Target Start/End: Complemental strand, 20495611 - 20495566
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    ||||||||||||||||||||  |||||||  |||||||||||||||    
T  20495611 aaaattgcttttttgacatagaaaacttcgtattgacacaagtaaa 20495566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Complemental strand, 24074552 - 24074519
Alignment:
Q  404 cccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||||||| ||||||||||||||||    
T  24074552 cccctacatataataatgcattgtcctaccaact 24074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 30942614 - 30942675
Alignment:
Q  370 taaataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtccta 431  Q
    ||||||||||| || |||  || ||||||||| |||||| ||||||||||| ||||||||||    
T  30942614 taaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccta 30942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 41225702 - 41225747
Alignment:
Q  393 tcgaaccccagcccct-acatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||    
T  41225702 tcgaaccccaaccccttacatataataatgcattgtcctaccaact 41225747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Original strand, 43763327 - 43763360
Alignment:
Q  404 cccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||||| |||||||||||||||    
T  43763327 cccctacatataataataaattgtcctaccaact 43763360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 4798579 - 4798623
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| |||| |||||||||||    
T  4798579 tcgaaccccggcccctgcatataataatgcattatcctaccaact 4798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 8740694 - 8740738
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||    
T  8740694 tcgaacctcagcccctgcatataatactgcattgtcctaccaact 8740738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 10199780 - 10199824
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  10199780 tcgaaccccggcccctgcatataataatgcattgtcctactaact 10199824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 17980339 - 17980295
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| | ||||||||||||||    
T  17980339 tcgaaccccggcccctgcatataataatgctttgtcctaccaact 17980295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 25689426 - 25689470
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| | |||||||||||||||||| || |||||||||||||    
T  25689426 tcgaacctcggcccctacatataataatgcagtgtcctaccaact 25689470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 26702963 - 26702911
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    |||||||||  |||||||||||| ||||||||  |||||||||||||| ||||    
T  26702963 atgaaaatttattttttgacataggaaacttcctattgacacaagtaatttac 26702911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 43468743 - 43468787
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||| ||| ||||||||||||||||    
T  43468743 tcgaaccccgacccctacatataacaatgcattgtcctaccaact 43468787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 31858443 - 31858555
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||| |||||||| ||||||    
T  31858443 gaaaattgcttttttgacatgagaaacttcacattgacacaagtaatttacgtaagggcccctggcggtagttaactaccgttgggaaaaccgccggcag 31858542  T
Q  563 -ttaactgccgct 574  Q
     ||||||||||||    
T  31858543 tttaactgccgct 31858555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 34365813 - 34365748
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||| ||| ||| ||||||||| |||||| || |||||||| ||||||||||||||||    
T  34365813 aataagtggagtgttcgaggttcgaaccccggcccctgcacataataatgcattgtcctaccaact 34365748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 9491773 - 9491817
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||    
T  9491773 tcgaaccccggcccctacatataataatgcattgtcctaccaact 9491817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 15288993 - 15289037
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  15288993 tcgaaccccagcccctacatataataatgcaatgtcctaccaact 15289037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 9438359 - 9438315
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||    
T  9438359 tcgaaccccaacccctgcatataataatgcattgtcctaccaact 9438315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 18904721 - 18904765
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  18904721 tcgaaccccggcccatacatataataatgcattgtcctaccaact 18904765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 18991541 - 18991497
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||    
T  18991541 tcgaaccccggcccctacatataataatgcattgtcttaccaact 18991497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 5613795 - 5613906
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||||||||||||||| | |||| |||  |||||| |||||||| ||| | ||  ||||   ||||||||||||||| ||    |||||| ||||||    
T  5613795 gaaaattgcttttttgacaaaggaaagttcctattgacccaagtaaaatacttaaatacccccagcggtagttaactaccattatccaaaccgccggcag 5613894  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  5613895 ttaactgccgct 5613906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 439
Target Start/End: Original strand, 21507250 - 21507285
Alignment:
Q  404 cccctacatataataatacattgtcctaccaactaa 439  Q
    ||||| ||||||||||||||||||||||||||||||    
T  21507250 cccctgcatataataatacattgtcctaccaactaa 21507285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 510
Target Start/End: Complemental strand, 31860788 - 31860741
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    ||||||||||||| |||||||  |||||||||| ||||||||||||||    
T  31860788 gaaaattgcttttctgacatagaaaacttcacaatgacacaagtaaat 31860741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 22983637 - 22983599
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtccta 431  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  22983637 tcgaaccccggcccctgcatataataatacattgtccta 22983599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 23804771 - 23804809
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtccta 431  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  23804771 tcgaaccccggcccctgcatataataatacattgtccta 23804809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 510
Target Start/End: Complemental strand, 26839320 - 26839274
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    |||||||||||| |||||| | ||| |||||||||||||||||||||    
T  26839320 aaaattgcttttctgacatcaaaaagttcacattgacacaagtaaat 26839274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 441
Target Start/End: Original strand, 753329 - 753398
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaactaaac 441  Q
    ||||||||| || | || || |||||||||  |||||||||||||||||  ||||||||||||| |||||    
T  753329 aataagtggggtgtccagggttcgaaccccgacccctacatataataatgtattgtcctaccaattaaac 753398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 10377141 - 10377206
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || |||  || ||||||||| ||| || ||||||||||| ||||||||||||||||    
T  10377141 aataagtggggtgttcggggttcgaaccccggcctctgcatataataatgcattgtcctaccaact 10377206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Original strand, 20716441 - 20716474
Alignment:
Q  404 cccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||||||| ||||||||||||||||    
T  20716441 cccctacatataataatgcattgtcctaccaact 20716474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 6270626 - 6270686
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctac 432  Q
    ||||| ||| || |||| || ||||||||| |||||| |||||||||||| ||||||||||    
T  6270626 aataattggggtgttcagggttcgaaccccggcccctgcatataataatatattgtcctac 6270686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 12089154 - 12089110
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||| ||||||||||| ||||||||||||||||    
T  12089154 tcgaactccggcccctgcatataataatgcattgtcctaccaact 12089110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 19165408 - 19165364
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| || || ||||||||||| ||||||||||||||||    
T  19165408 tcgaaccccaacctctgcatataataatgcattgtcctaccaact 19165364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 513
Target Start/End: Complemental strand, 22868480 - 22868432
Alignment:
Q  465 aaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    |||||||||||||||||||  |||||||  |||||||||||||| ||||    
T  22868480 aaattgcttttttgacatagaaaacttcctattgacacaagtaatttac 22868432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 435
Target Start/End: Original strand, 26598641 - 26598673
Alignment:
Q  403 gcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||||||||||| ||||||||||||||    
T  26598641 gcccctacatataataatgcattgtcctaccaa 26598673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 31741513 - 31741545
Alignment:
Q  405 ccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||| ||||||||||||||||    
T  31741513 ccctacatataataatgcattgtcctaccaact 31741545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 43036551 - 43036466
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| ||| | || ||||||  |||||||||||||||||||||    
T  43036551 gaaaattgcttttttgacataaaaaacttcacaatgacacaagtaaaatacttaaatgcccctagcggtagttaactaccgttgag 43036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 570
Target Start/End: Original strand, 32715266 - 32715376
Alignment:
Q  460 aatgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcgg 559  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||| ||||   || ||| |   |||||||||||||||||||  | |||||||||    
T  32715266 aatgaaaattgcttttttgacataggaaacttcctattgacacaaataatttactaaaaagcctccagcggtagttaactaccgttggaagaaccgtcgg 32715365  T
Q  560 cagttaactgc 570  Q
    |||||||||||    
T  32715366 cagttaactgc 32715376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 33944380 - 33944445
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||| ||| ||||||||| |||||| ||||||||||| |||| |||||||||||    
T  33944380 aataagtggagtattcgaggttcgaaccccggcccctgcatataataatgcattatcctaccaact 33944445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 2333904 - 2333822
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgtt 545  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||| ||| | || |||||  ||||| |||||| ||||||    
T  2333904 gaaaattgcttttctgacataaaaaacttcacaatgacacaagtaaaatacttaaatgcccccaacggttgttaacaaccgtt 2333822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 49815732 - 49815819
Alignment:
Q  487 aacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    ||||||||| |||| |||| ||||||||| || ||||   |||||||||||||||||||| |  ||||| | ||||||||||||||||    
T  49815732 aacttcacaatgacgcaagaaaattacgtaaaagccctcaacggtagttaactaccgttgggctaaccggcagcagttaactgccgct 49815819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 512
Target Start/End: Complemental strand, 1593904 - 1593855
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaatta 512  Q
    ||||||||||||| |||||||  |||||||||| ||||||||||||||||    
T  1593904 gaaaattgcttttctgacatagaaaacttcacaatgacacaagtaaatta 1593855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 461 - 510
Target Start/End: Complemental strand, 17931131 - 17931082
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    ||||||||||||||| ||||||| ||||||||  ||||||||||||||||    
T  17931131 atgaaaattgcttttctgacataggaaacttcctattgacacaagtaaat 17931082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 20955576 - 20955511
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||| | ||| || ||||||| ||  |||||||||||||||||||||||| |||||    
T  20955576 aataagtggagtatccgaggttcaaaccccaacctttacatataataatacattgtcctatcaact 20955511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 44975965 - 44975920
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaacta 438  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||    
T  44975965 tcgaaccccaacccctgcatacaataatacattgtcctaccaacta 44975920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 48501675 - 48501732
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcc 429  Q
    ||||||||| || ||| | | |||||||||||||||| ||||||||||||||||||||    
T  48501675 aataagtggggtgttcgatgttcgaaccccagcccctgcatataataatacattgtcc 48501732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 548925 - 548969
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  548925 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 548969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 3442900 - 3442856
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  3442900 tcgaaccccggccccgacatataataatgcattgtcctaccaact 3442856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 6054037 - 6053993
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  6054037 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 6053993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 20753163 - 20753207
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||    
T  20753163 tcgaaccccggcccctacatataataatgcattttcctaccaact 20753207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 20855773 - 20855733
Alignment:
Q  528 cggtagttaactaccgttgagaaaaccgtcggcagttaact 568  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  20855773 cggtagttaactaccgttgataaaaccgccggcagttaact 20855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 31433821 - 31433773
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    |||||||||||||| |||||||| ||| ||||||||||||||| |||||    
T  31433821 tgaaaattgcttttctgacataaaaaagttcacattgacacaattaaat 31433773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 47017984 - 47018028
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  47017984 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 47018028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 531 - 574
Target Start/End: Original strand, 31302352 - 31302395
Alignment:
Q  531 tagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||    
T  31302352 tagttaactaccgttggaaaaaccgtcggtagttaactgccgct 31302395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 43035767 - 43035878
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||||||||| ||||||    || |||||||||||||||||||| ||| | || | ||| | ||||||||||||||| |||  || || | | ||||    
T  43035767 gaaaattgcttttctgacattgataagttcacattgacacaagtaaaatacctaaatgtccccggcggtagttaactaccattggaaatactggcagcag 43035866  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  43035867 ttaactgccgct 43035878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 9285697 - 9285739
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||    
T  9285697 tcgaaccccagaccctgcatataataatgcattgtcctaccaa 9285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 35112765 - 35112719
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||||||||  ||||||||||||||||| |||| |||||||||||||    
T  35112765 tcgaaccccgacccctacatataataatgcattatcctaccaactaa 35112719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 510
Target Start/End: Original strand, 50910227 - 50910269
Alignment:
Q  468 ttgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    ||||||||||||||| | |||||||| ||||||||||||||||    
T  50910227 ttgcttttttgacatcaaaaacttcatattgacacaagtaaat 50910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 52560821 - 52560779
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||    
T  52560821 tcgaaccccggcccctgcatataataatgcattgtcctaccaa 52560779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 528 - 574
Target Start/End: Complemental strand, 55741479 - 55741433
Alignment:
Q  528 cggtagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    ||||||||||||||||||||||||||   | ||||||||||||||||    
T  55741479 cggtagttaactaccgttgagaaaacgcgcagcagttaactgccgct 55741433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 56546487 - 56546529
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||    
T  56546487 tcgaaccccggcccctgcatataataatgcattgtcctaccaa 56546529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Original strand, 11284241 - 11284294
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgtt 516  Q
    ||||||||||||| ||||||| ||||||||  ||||||| |||||||| |||||    
T  11284241 gaaaattgcttttctgacataggaaacttcctattgacataagtaaatgacgtt 11284294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 16201350 - 16201309
Alignment:
Q  396 aaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  16201350 aaccccaacccctacatgtaataatgcattgtcctaccaact 16201309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 435
Target Start/End: Complemental strand, 23376228 - 23376199
Alignment:
Q  406 cctacatataataatacattgtcctaccaa 435  Q
    ||||||||||||||||||||||||||||||    
T  23376228 cctacatataataatacattgtcctaccaa 23376199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Complemental strand, 43115314 - 43115281
Alignment:
Q  404 cccctacatataataatacattgtcctaccaact 437  Q
    ||||| ||||||||||||||||||||||||||||    
T  43115314 cccctgcatataataatacattgtcctaccaact 43115281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 3465640 - 3465596
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||| ||||||||||| ||||||||||||||||    
T  3465640 tcgaactccggcccctgcatataataatgcattgtcctaccaact 3465596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 5430415 - 5430447
Alignment:
Q  405 ccctacatataataatacattgtcctaccaact 437  Q
    |||| ||||||||||||||||||||||||||||    
T  5430415 ccctgcatataataatacattgtcctaccaact 5430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 9172409 - 9172453
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  9172409 tcgaaccccgacccctgcatataataatgcattgtcctaccaact 9172453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 575
Target Start/End: Original strand, 17482668 - 17482780
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||| || |||| | | |||| ||| ||||||||||| || |||||| || |||||   ||||||||||||||||||  |  |||||   ||||    
T  17482668 gaaaattgctcttctgacttcaaaaacgtcatattgacacaagaaatttacgtaaaagcccccagcggtagttaactaccgttaggctaaccggtagcag 17482767  T
Q  563 ttaactgccgcta 575  Q
    |||||||||||||    
T  17482768 ttaactgccgcta 17482780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 17859835 - 17859791
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||||| ||||||||| ||||||||||||||||    
T  17859835 tcgaactccggcccctacgtataataatgcattgtcctaccaact 17859791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 18136428 - 18136472
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||| ||| ||| |||||||||||||| |||||||||||||||||    
T  18136428 gaactccaacccttacatataataatatattgtcctaccaactaa 18136472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 20181268 - 20181224
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||||| | ||||||||||||||||    
T  20181268 tcgaacccctacccctacatataatactgcattgtcctaccaact 20181224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 29269353 - 29269389
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcc 429  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  29269353 tcgaatcccagcccctacatataataatgcattgtcc 29269389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 34773721 - 34773765
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| |||||||| ||||||||||| |||||||||| |||||    
T  34773721 tcgaacctcagcccctgcatataataatgcattgtcctatcaact 34773765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 43142560 - 43142516
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||||||||||||||| || |||||||| ||||    
T  43142560 tcgaaccccaacccctacatataataatgcactgtcctactaact 43142516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 47416525 - 47416481
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||| ||||||||||| |||| |||||||||||    
T  47416525 tcgaaccccaacccctgcatataataatccattatcctaccaact 47416481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 49123636 - 49123680
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||| ||| ||| |||||||||||||| |||||||||||||||||    
T  49123636 gaactccaacccttacatataataatatattgtcctaccaactaa 49123680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 53698018 - 53698062
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| |||||||||| |||||    
T  53698018 tcgaaccccggcccctgcatataataatgcattgtcctaacaact 53698062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 53815753 - 53815717
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcc 429  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  53815753 tcgaaccccagcccctgcatataataatgcattgtcc 53815717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 462 - 525
Target Start/End: Original strand, 37459727 - 37459790
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccct 525  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||    
T  37459727 tgaaaattgcttttttgacatagaaaacttcacattgacacaagtaaatcacgttagggcccct 37459790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 8262722 - 8262833
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||||| |||||||||||| |||||||| |  |||||||||||| ||  |||  |||||| |||||||||||||| |||||  | ||||| || |||    
T  8262722 gaaaattgcatttttgacataaaaaacttcataaagacacaagtaaaataatttattgcccctaacggtagttaactatcgttggtataaccgccgacag 8262821  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  8262822 ttaactgccgct 8262833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 49639106 - 49639041
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || |||  || ||||||||| |||||||||||||||||| ||||||||||||||||    
T  49639106 aataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcctaccaact 49639041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 13540002 - 13540046
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  13540002 tcgaaccccaacccctacatataataatgcattgtcctaccaact 13540046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 33206814 - 33206770
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||    
T  33206814 tcgaaccccagcccctgcatataataatgcattgtcctaccaact 33206770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 30715874 - 30715985
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||||||||||||||| | |||| |||  ||||||||||||||| ||| | ||  ||||   ||||||||||||||||||    ||| |||||||||    
T  30715874 gaaaattgcttttttgacaaatgaaagttcctattgacacaagtaaaatacataaatacccccagcggtagttaactaccgttatccaaagcgtcggcag 30715973  T
Q  563 ttaactgccgct 574  Q
     |||||||||||    
T  30715974 ataactgccgct 30715985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 44809852 - 44809899
Alignment:
Q  528 cggtagttaactaccgttgagaaaaccgtcggcagttaactgccgcta 575  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  44809852 cggtagttaactaccgttggaaaaaccgccggcagttaactgccgcta 44809899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 45713537 - 45713491
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||    
T  45713537 tcgaactccggcccctacatataataatgcattgtcctaccaactaa 45713491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 42329143 - 42329090
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgtt 516  Q
    ||||||||||||| ||||||| ||||||||  |||||||||||||||| |||||    
T  42329143 gaaaattgcttttctgacataggaaacttcctattgacacaagtaaatgacgtt 42329090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 54295284 - 54295219
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||| | | ||| ||||||||| ||||||||||||| |||| |||| |||||||||||    
T  54295284 aataagtggagtgtccgaggttcgaaccccggcccctacatatattaatgcattatcctaccaact 54295219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 20244191 - 20244147
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  20244191 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 20244147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 34136820 - 34136776
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||    
T  34136820 tcgaaccccaacccctacatataataatgcattgttctaccaact 34136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 530 - 574
Target Start/End: Complemental strand, 40469231 - 40469187
Alignment:
Q  530 gtagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||    
T  40469231 gtagttaactaccgttgggaaaaccgccggcagttaactgtcgct 40469187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 548
Target Start/End: Original strand, 44846954 - 44847041
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    ||||||||||||||| ||||||   |||||||||||| ||||||||||| ||| | ||  || |   |||||||||||||||||||||    
T  44846954 atgaaaattgcttttctgacattgaaaacttcacattaacacaagtaaaatacttaaatacctccagcggtagttaactaccgttgag 44847041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 14417925 - 14417883
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||    
T  14417925 tcgaactccagcccctgcatataataatgcattgtcctaccaa 14417883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Complemental strand, 33942808 - 33942758
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||| ||||||| ||||||||  |||||||||||||| ||||    
T  33942808 gaaaattgcttttgtgacataggaaacttcctattgacacaagtaatttac 33942758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 528 - 574
Target Start/End: Complemental strand, 37222821 - 37222775
Alignment:
Q  528 cggtagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    |||||||||||||||||||| | ||||| ||| ||||||||||||||    
T  37222821 cggtagttaactaccgttgaaagaaccgccggtagttaactgccgct 37222775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 51545241 - 51545291
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||| |||||||  |||||||||| |||||||||||| ||||    
T  51545241 gaaaattgcttttctgacatagaaaacttcacaatgacacaagtaatttac 51545291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 12515380 - 12515327
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgtt 516  Q
    |||||||||||||||||||||  |||||||| |  |||||||||||| ||||||    
T  12515380 gaaaattgcttttttgacatagaaaacttcataaagacacaagtaaaatacgtt 12515327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 34503273 - 34503228
Alignment:
Q  392 ctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| || ||| ||||||||||| ||||||||||||||||    
T  34503273 ctcgaaccccggctcctgcatataataatgcattgtcctaccaact 34503228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 53468026 - 53467962
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | | ||| ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  53468026 aataagtggggtgtccgaggttcgaacccc-gcccctgcatataataatgcattgtcctaccaact 53467962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 436
Target Start/End: Original strand, 13616123 - 13616155
Alignment:
Q  404 cccctacatataataatacattgtcctaccaac 436  Q
    ||||||||||||||||| |||||||||||||||    
T  13616123 cccctacatataataatgcattgtcctaccaac 13616155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 17439982 - 17440046
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaac 436  Q
    ||||||||| |||| | ||| || ||| || |||||| ||||||||||| |||||||||||||||    
T  17439982 aataagtggggtatccgaggttcaaacaccggcccctgcatataataatgcattgtcctaccaac 17440046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 19540398 - 19540354
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||| ||| |||||||||||  |||||||||||||||    
T  19540398 tcgaaccccagctcctgcatataataatgtattgtcctaccaact 19540354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 23820686 - 23820642
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||| ||||||||||| ||||||||||||||||    
T  23820686 tcgaactccggcccctgcatataataatgcattgtcctaccaact 23820642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 24751298 - 24751342
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  24751298 tcgaaccccggcccctgcatataataatgcattgtcctactaact 24751342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 35849317 - 35849361
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| ||| |||| ||||||||||| ||||||||||||||||    
T  35849317 tcgaaccacagtccctgcatataataatgcattgtcctaccaact 35849361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 39492878 - 39492834
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||| | ||||||||||| |||||||||| |||||    
T  39492878 tcgaaccccagcccatgcatataataatgcattgtcctaacaact 39492834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 42271051 - 42271095
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||| ||| ||||||||||||||||    
T  42271051 tcgaaccccggcccctgcatataacaatgcattgtcctaccaact 42271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 43566834 - 43566878
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  43566834 tcgaaccccgacccctgcatataataatgcattgtcctaccaact 43566878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 574
Target Start/End: Original strand, 44006394 - 44006505
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    |||||||||||||| ||||||   ||| |||||| ||||| ||||||| ||| | || |||||   |||||||||||||||||| ||  ||||| | |||    
T  44006394 tgaaaattgcttttctgacattgaaaatttcacaatgacataagtaaaatacttaaatgcccccagcggtagttaactaccgttcag-gaaccggcagca 44006492  T
Q  562 gttaactgccgct 574  Q
    ||||||| |||||    
T  44006493 gttaactaccgct 44006505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 49019240 - 49019196
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||||||| ||||||| ||||||||    
T  49019240 tcgaaccccgacccctacatataataatgcattgtcttaccaact 49019196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 49146141 - 49146097
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  49146141 tcgaaccccgacccctgcatataataatgcattgtcctaccaact 49146097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 52030178 - 52030142
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcc 429  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  52030178 tcgaaccccggcccctgcatataataatacattgtcc 52030142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 574
Target Start/End: Original strand, 55146561 - 55146673
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    |||||||||||||||||| | | |||| |||  |||||||||| |||| ||| | ||  ||||  ||| |||||||||||||||    ||| || |||||    
T  55146561 tgaaaattgcttttttgaaaaaggaaagttcctattgacacaattaaaatacataaatacccccaacgatagttaactaccgttattcaaagcgccggca 55146660  T
Q  562 gttaactgccgct 574  Q
    |||||||||||||    
T  55146661 gttaactgccgct 55146673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 462 - 574
Target Start/End: Original strand, 2812 - 2924
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    ||||||||||||||||||||||  |||||||| || |||| ||||||| |||||||| ||||    |||||||||||||||||||  | ||||| || ||    
T  2812 tgaaaattgcttttttgacatagaaaacttcatatagacataagtaaaatacgttaatgcccacagcggtagttaactaccgttggtagaaccggcgaca 2911  T
Q  562 gttaactgccgct 574  Q
    |||||| ||||||    
T  2912 gttaacagccgct 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 548
Target Start/End: Complemental strand, 30065 - 29979
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    |||| ||||||||||||||||||| |||||||||| ||| ||||||||| ||| | || ||||||  |||||||||||||||||||||    
T  30065 atgagaattgcttttttgacataa-aaacttcacaatgatacaagtaaaatacttaaatgcccctagcggtagttaactaccgttgag 29979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 466 - 548
Target Start/End: Complemental strand, 32402 - 32321
Alignment:
Q  466 aattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| ||| | || |||||   |||||||||||||||||||||    
T  32402 aattgcttttttgacataa-aaacttcacaatgacacaagtaaaatacttaaatgcccccagcggtagttaactaccgttgag 32321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 24432 - 24543
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||| ||||||||||||    || |||||||||||||||||||| ||| | |  |||||  ||||| ||||||||||||||  || |||| |  |||    
T  24432 gaaaatttcttttttgacattgataagttcacattgacacaagtaaaatacctaatagcccccaacggtggttaactaccgttggaaataccggcaacag 24531  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  24532 ttaactgccgct 24543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 522
Target Start/End: Complemental strand, 27870352 - 27870294
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcc 522  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  27870352 aaaattgcttttttgacattgataacttcacattgacacaagtaaattacgttaaggcc 27870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 509
Target Start/End: Original strand, 20708207 - 20708253
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  20708207 gaaaattgcttttctgacataggaaacttcacaatgacacaagtaaa 20708253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 509
Target Start/End: Original strand, 20876251 - 20876297
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  20876251 gaaaattgcttttctgacataggaaacttcacaatgacacaagtaaa 20876297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 22706068 - 22706110
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||| |||||||| ||||||||||||||||||||||||||||    
T  22706068 gaacctcagcccctgcatataataatacattgtcctaccaact 22706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 47317865 - 47317779
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgag 548  Q
    |||||||||||||| ||||||   |||||| ||| ||||||||||||| ||| | || |||||   |||||||||||||||||||||    
T  47317865 tgaaaattgcttttctgacattgaaaactttacaatgacacaagtaaaatacttaaatgcccccagcggtagttaactaccgttgag 47317779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 25818364 - 25818299
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||| |||  || |||||| ||||||||| ||||||||||| |||| |||||||||||    
T  25818364 aataagtggagtgttcggggttcgaactccagcccctgcatataataatgcattatcctaccaact 25818299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 27047753 - 27047797
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  27047753 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 27047797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 461 - 509
Target Start/End: Complemental strand, 47944469 - 47944421
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    |||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  47944469 atgaaaattgtttttatgacctaagaaacttcacaatgacacaagtaaa 47944421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 461 - 509
Target Start/End: Complemental strand, 47949899 - 47949851
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    |||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  47949899 atgaaaattgtttttatgacctaagaaacttcacaatgacacaagtaaa 47949851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 437
Target Start/End: Complemental strand, 36176919 - 36176884
Alignment:
Q  402 agcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||||||||| ||||||||||||||||    
T  36176919 agcccctacatataataatgcattgtcctaccaact 36176884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 46716413 - 46716346
Alignment:
Q  370 taaataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||| || |||| || |||||||||  || || ||||||||||| ||||||||||||||||    
T  46716413 taaataagtggggtgttcagggttcgaaccccgacctctgcatataataatgcattgtcctaccaact 46716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 2261522 - 2261564
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||    
T  2261522 tcgaaccccggcccctgcatataataatgcattgtcctaccaa 2261564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 17900917 - 17900963
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||| |||| |||||| ||||||||||| ||||||||||||||||||    
T  17900917 tcgagccccggcccctgcatataataatgcattgtcctaccaactaa 17900963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 24479640 - 24479598
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||||||||| ||||||||||| || |||||||||||    
T  24479640 tcgaaccccagcccctccatataataatgcactgtcctaccaa 24479598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 509
Target Start/End: Complemental strand, 27030685 - 27030639
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    |||||||| |||| ||||||| ||||||||||||||||| |||||||    
T  27030685 gaaaattgtttttctgacataggaaacttcacattgacataagtaaa 27030639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 30699859 - 30699821
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtccta 431  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  30699859 tcgaaccccaacccctacatataataatgcattgtccta 30699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 31279350 - 31279388
Alignment:
Q  399 cccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  31279350 cccagtccctacatataataatgcattgtcctaccaact 31279388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 47863781 - 47863831
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||||||||||| ||| ||||  |||||||||||||| ||||    
T  47863781 gaaaattgcttttttgacataggaagcttcctattgacacaagtaatttac 47863831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 504
Target Start/End: Complemental strand, 1299148 - 1299107
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaa 504  Q
    ||||||||||||||||||||| ||||||||  ||||||||||    
T  1299148 gaaaattgcttttttgacataggaaacttcctattgacacaa 1299107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 572
Target Start/End: Original strand, 3614417 - 3614490
Alignment:
Q  499 acacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaactgccg 572  Q
    ||||||||||| ||||| || |||||   ||||||||||||||||||  | |||||| ||||||||||| ||||    
T  3614417 acacaagtaaaatacgtaaatgcccccagcggtagttaactaccgttctgcaaaccggcggcagttaacagccg 3614490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Original strand, 14967683 - 14967716
Alignment:
Q  404 cccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||||||| ||||||||||||||||    
T  14967683 cccctacatataataatgcattgtcctaccaact 14967716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Original strand, 15397159 - 15397192
Alignment:
Q  404 cccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||||||| ||||||||||||||||    
T  15397159 cccctacatataataatgcattgtcctaccaact 15397192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 25711148 - 25711213
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | | ||| ||||||||| |||||||||||||||||| |||| ||||| |||||    
T  25711148 aataagtggggtgtccgaggttcgaaccccggcccctacatataataatgcattatcctatcaact 25711213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 30152819 - 30152754
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || |||  || |||||||||  |||||| |||||||||| ||||||||||||||||    
T  30152819 aataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcctaccaact 30152754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 36315991 - 36316056
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | | ||| ||||||||| |||||| ||||||||||| |||| |||||||||||    
T  36315991 aataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattatcctaccaact 36316056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 924330 - 924374
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||||||||||||||| || | |||||||||||    
T  924330 tcgaaccccaacccctacatataataatgcactatcctaccaact 924374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 7263036 - 7263080
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| ||| || |||||||||||||| ||||||||||||||||    
T  7263036 tcgaactccaacctctacatataataatgcattgtcctaccaact 7263080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 8195972 - 8195928
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| ||||||  |||||||||| ||||||||||||||||    
T  8195972 tcgaaccccggcccctggatataataatgcattgtcctaccaact 8195928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 23685592 - 23685636
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| |||||||||| |||||    
T  23685592 tcgaaccccggcccctgcatataataatgcattgtcctatcaact 23685636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 27907938 - 27907978
Alignment:
Q  397 accccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  27907938 accccggcccctgcatataataatgcattgtcctaccaact 27907978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 27957635 - 27957675
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctacc 433  Q
    ||||||||| |||| | ||||||||||||||||||||||||    
T  27957635 tcgaaccccggcccttgcatataataatacattgtcctacc 27957675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 437
Target Start/End: Original strand, 29710150 - 29710182
Alignment:
Q  405 ccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||| ||||||||||||||||    
T  29710150 ccctacatataataatgcattgtcctaccaact 29710182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 30644226 - 30644182
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| || |||||| ||||||||||| ||||||||||||||||    
T  30644226 tcgaacaccggcccctgcatataataatgcattgtcctaccaact 30644182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 35368453 - 35368409
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| ||||||||| |||||||||| || |||||||||||||    
T  35368453 tcgaaccacagcccctaaatataataatgcaatgtcctaccaact 35368409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 571
Target Start/End: Complemental strand, 41964865 - 41964757
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    ||||||||||||| ||||||   ||| |||  ||||||| ||||||||||| | || | |||   ||||||||||||||||||  | |||||| || |||    
T  41964865 gaaaattgcttttctgacattgaaaagttccaattgacataagtaaattacttaaacgtccccagcggtagttaactaccgttatgcaaaccgccgacag 41964766  T
Q  563 ttaactgcc 571  Q
    |||||||||    
T  41964765 ttaactgcc 41964757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 44437863 - 44437907
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  44437863 tcgaaccccggcccctgcatataataatgcattgtcctactaact 44437907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 46918994 - 46919038
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||| |||| ||||||||||||||||||||||||| ||| ||||    
T  46918994 tcgaatcccaacccctacatataataatacattgtcttactaact 46919038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 47552270 - 47552226
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||| | ||||||||||| ||||||||||||||||    
T  47552270 tcgaaccccggcccttgcatataataatgcattgtcctaccaact 47552226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 331 - 438
Target Start/End: Original strand, 4157624 - 4157732
Alignment:
Q  331 ttttattttatcagatagtctggtagttagaattcacct-taaataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcc 429  Q
    |||| |||| ||| ||||||| || |||||||||||||| | ||||||||| || | |  || |||||| ||||| ||||||||||||||| ||||||||    
T  4157624 tttttttttttcatatagtctagtggttagaattcacctgtgaataagtggggtgtccggggttcgaactccagcacctacatataataatgcattgtcc 4157723  T
Q  430 taccaacta 438  Q
    |||||||||    
T  4157724 taccaacta 4157732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 31956923 - 31956879
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  31956923 tcgaaccccagcccctacatataataatgcattgtcctaccaact 31956879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 34456935 - 34457046
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcag 562  Q
    |||||||||||||||||||||| |||||| | |  |||||||||||| ||| | || ||||    ||||||||||||| ||||| | ||| || ||||||    
T  34456935 gaaaattgcttttttgacataaaaaactttataaagacacaagtaaaatacttaaatgccctcagcggtagttaactatcgttgggcaaatcggcggcag 34457034  T
Q  563 ttaactgccgct 574  Q
    ||||||||||||    
T  34457035 ttaactgccgct 34457046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 18386850 - 18386892
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  18386850 tcgaaccccagcccctacatataataatgcattgtcctaccaa 18386892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 575
Target Start/End: Complemental strand, 22712267 - 22712155
Alignment:
Q  463 gaaaattgcttttttgacataagaa-acttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    ||||||||||||||||||| | ||| | |||  |||||||||||||||| | ||||| ||||||  ||||||||||||||||||   | ||||||| |||    
T  22712267 gaaaattgcttttttgaca-atgaataattcctattgacacaagtaaatgatgttaatgcccctagcggtagttaactaccgtttgaagaaccgtcagca 22712169  T
Q  562 gttaactgccgcta 575  Q
    ||||| ||||||||    
T  22712168 gttaattgccgcta 22712155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 20122513 - 20122557
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||    
T  20122513 tcgaaccccggcccctacatataataatgcattgtcctaccaact 20122557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 24034070 - 24034137
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaactaa 439  Q
    |||||||||||| | | ||| |||||||||  ||||| ||||||||||| ||||||||||||||||||    
T  24034070 aataagtggagtgtccgaggttcgaaccccgacccctgcatataataatgcattgtcctaccaactaa 24034137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 572
Target Start/End: Complemental strand, 31184539 - 31184430
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgtta-aggcccctgacggtagttaactaccgttgagaaaaccgtcggc 560  Q
    ||||||||||||||| ||||||  ||| |||||| ||||||||||||||||| ||| || |||| | ||||||||||||||||||| |  ||||| | ||    
T  31184539 tgaaaattgcttttt-gacatacaaaagttcacaatgacacaagtaaattacattagagtccccag-cggtagttaactaccgttgggttaaccgacagc 31184442  T
Q  561 agttaactgccg 572  Q
    |||||| |||||    
T  31184441 agttaattgccg 31184430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 528 - 574
Target Start/End: Complemental strand, 30497825 - 30497779
Alignment:
Q  528 cggtagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||    
T  30497825 cggtagttaactaccgttggggaaaccgccggcagttaactgccgct 30497779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 509
Target Start/End: Complemental strand, 31854313 - 31854267
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  31854313 gaaaattgcttttttgatataggaaacttcacaatgacacaagtaaa 31854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 36426894 - 36426936
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  36426894 tcgaaccccaacccctacatataataatgcattgtcctaccaa 36426936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 509
Target Start/End: Original strand, 42683466 - 42683512
Alignment:
Q  463 gaaaattgcttttttgacataagaaacttcacattgacacaagtaaa 509  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||    
T  42683466 gaaaattgcttttttgacataaaaaacttcacaatgacacaaataaa 42683512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 570
Target Start/End: Original strand, 13329743 - 13329851
Alignment:
Q  462 tgaaaattgcttttttgacataagaa-acttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggc 560  Q
    ||||||||| |||||||||| | ||| |||||  ||| |||||||||||| | ||||| ||| ||  || ||||||||||||||||| | ||||| ||||    
T  13329743 tgaaaattgtttttttgaca-atgaatacttcctattaacacaagtaaatgatgttaatgcctctagcgatagttaactaccgttgaaagaaccgccggc 13329841  T
Q  561 agttaactgc 570  Q
    ||||||||||    
T  13329842 agttaactgc 13329851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 18209992 - 18210025
Alignment:
Q  403 gcccctacatataataatacattgtcctaccaac 436  Q
    ||||||||||||||||||||||||||||||||||    
T  18209992 gcccctacatataataatacattgtcctaccaac 18210025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 38820629 - 38820588
Alignment:
Q  396 aaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  38820629 aaccccagcccctacatataataatgcattgtcctaacaact 38820588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 580821 - 580865
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  580821 tcgaaccccggcccctgcatataataatgcattgtcctaccaact 580865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 8234830 - 8234874
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||    
T  8234830 tcgaaccccggcccctacatataataatgtattgtcctaccaact 8234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 9547165 - 9547209
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||    
T  9547165 tcgaaccccggcccctgcatataataatacattgtcctatcaact 9547209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 574
Target Start/End: Original strand, 19507798 - 19507909
Alignment:
Q  463 gaaaattgcttttttgacataagaa-acttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    ||||||||||||||||||| | ||| |||||  |||||||||| |||| ||||| || |||||    |||||| ||||||||||| || ||||| || ||    
T  19507798 gaaaattgcttttttgaca-atgaatacttcctattgacacaattaaaatacgtaaatgcccccagtggtagtaaactaccgttgggagaaccgccgaca 19507896  T
Q  562 gttaactgccgct 574  Q
    |||||||||||||    
T  19507897 gttaactgccgct 19507909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 22297490 - 22297534
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  22297490 tcgaacccctgcccctgcatataataatgcattgtcctaccaact 22297534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 22538596 - 22538552
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||    
T  22538596 tcgaaccccaacccctgcatataataatgcattgtcctaccaact 22538552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 570
Target Start/End: Complemental strand, 31204261 - 31204153
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggca 561  Q
    |||||||||||||| |||||||  ||| |||||| ||||||||||||||||| |||  |||||   |||||| ||||| | |||| |  ||||| | |||    
T  31204261 tgaaaattgcttttctgacatacaaaagttcacaatgacacaagtaaattacattagagcccccagcggtagctaactgcagttgggctaaccggcagca 31204162  T
Q  562 gttaactgc 570  Q
    |||||||||    
T  31204161 gttaactgc 31204153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 32943396 - 32943352
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||||||| || ||||||||||| ||||||||||||||||    
T  32943396 tcgaaccccagcctctgcatataataatgcattgtcctaccaact 32943352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 36520818 - 36520862
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||    
T  36520818 tcgaaccccgacccctacatataataatgcattgtcctaccaact 36520862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 17154706 - 17154663
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaac 436  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||    
T  17154706 tcgaaccccggcccctgcatataataatgcattgtcctaccaac 17154663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 32891677 - 32891618
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtccta 431  Q
    ||||||||| || |||| || |||||||||| ||||| ||||||||||| ||||||||||    
T  32891677 aataagtggggtgttcagggttcgaaccccaacccctgcatataataatgcattgtccta 32891618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 39726450 - 39726516
Alignment:
Q  370 taaataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||| | ||| ||| ||||||| |  ||||||||||||||||| ||||||||||||||||    
T  39726450 taaataagtgga-tgttcgaggttcgaacctcgacccctacatataataatgcattgtcctaccaact 39726516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 18007304 - 18007262
Alignment:
Q  395 gaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||| ||  ||||||||||||||||||||||||||||||    
T  18007304 gaaccccaacctttacatataataatacattgtcctaccaact 18007262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 37245435 - 37245393
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||| ||||||||||||||||||||| || |||||||||||    
T  37245435 tcgaactccagcccctacatataataatgcactgtcctaccaa 37245393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 10026230 - 10026173
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcc 429  Q
    ||||||||||||   ||||| ||||| ||| | |||||||||||||||||||||||||    
T  10026230 aataagtggagtgcccaaggttcgaatcccggtccctacatataataatacattgtcc 10026173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 513
Target Start/End: Original strand, 17112305 - 17112354
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||||||||||| | |||||  |||||||||||||| ||||    
T  17112305 aaaattgcttttttgacataaaatacttcctattgacacaagtaatttac 17112354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 439
Target Start/End: Original strand, 17119473 - 17119502
Alignment:
Q  410 catataataatacattgtcctaccaactaa 439  Q
    ||||||||||||||||||||||||||||||    
T  17119473 catataataatacattgtcctaccaactaa 17119502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 31173376 - 31173457
Alignment:
Q  458 ataatgaaaattgcttttttgacataagaaacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaact 539  Q
    |||||||||||||||||| |||||||  ||| |||||| ||||||| | ||||||| | || ||||   |||||||||||||    
T  31173376 ataatgaaaattgcttttctgacatacaaaagttcacaatgacacatgaaaattacctaaaagccctcaacggtagttaact 31173457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 32988428 - 32988363
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || ||| | | |||||||||||||||| | ||||||||| ||||||| ||||||||    
T  32988428 aataagtggggtgttcgatgttcgaaccccagcccctgcgtataataatgcattgtcttaccaact 32988363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 513
Target Start/End: Original strand, 34519902 - 34519951
Alignment:
Q  464 aaaattgcttttttgacataagaaacttcacattgacacaagtaaattac 513  Q
    ||||||||||||||||||||| | |||||  |||||||||||||| ||||    
T  34519902 aaaattgcttttttgacataaaatacttcctattgacacaagtaatttac 34519951  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 36665508 - 36665443
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || | | ||| ||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  36665508 aataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattgtcctacaaact 36665443  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 492
Target Start/End: Original strand, 1481053 - 1481085
Alignment:
Q  460 aatgaaaattgcttttttgacataagaaacttc 492  Q
    ||||||||||||||||||||||||| |||||||    
T  1481053 aatgaaaattgcttttttgacataaaaaacttc 1481085  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 2114473 - 2114517
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||||||||||||||| |||||| |||||||||    
T  2114473 tcgaaccccgacccctacatataataatgcattgttctaccaact 2114517  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 2304347 - 2304311
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcc 429  Q
    |||||||||  ||||||||||||||||||||||||||    
T  2304347 tcgaaccccgacccctacatataataatacattgtcc 2304311  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 9791933 - 9791977
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  | ||||||||||||||| ||||||||||||||||    
T  9791933 tcgaaccccgacacctacatataataatgcattgtcctaccaact 9791977  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 10262796 - 10262752
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||    
T  10262796 tcgaaccccgacccctgcatataataatgcattgtcctaccaact 10262752  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 437
Target Start/End: Complemental strand, 11727378 - 11727346
Alignment:
Q  405 ccctacatataataatacattgtcctaccaact 437  Q
    |||||||||||||||||||||||||| ||||||    
T  11727378 ccctacatataataatacattgtcctgccaact 11727346  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 26807122 - 26807166
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||  |||||| ||||||||||| ||||||||||||||||    
T  26807122 tcgaaccctggcccctgcatataataatgcattgtcctaccaact 26807166  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Original strand, 30474233 - 30474277
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||| | |||||| ||||||||||| ||||||||||||||||    
T  30474233 tcgaacctcggcccctgcatataataatgcattgtcctaccaact 30474277  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 510
Target Start/End: Complemental strand, 31298898 - 31298850
Alignment:
Q  462 tgaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    |||||||||||||||||| |||  |||||||  ||||||||||||||||    
T  31298898 tgaaaattgcttttttgatatagaaaacttcctattgacacaagtaaat 31298850  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 36481126 - 36481082
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||| ||||||| | ||||||||||| ||||||||||||||||    
T  36481126 tcgaactccagcccatgcatataataatgcattgtcctaccaact 36481082  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 45523722 - 45523678
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    |||||||||  ||||| |||||||| |||||||||||||||||||    
T  45523722 tcgaaccccgacccctgcatataattatacattgtcctaccaact 45523678  T

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Target: scaffold1990 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 435
Target Start/End: Complemental strand, 951 - 909
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  951 tcgaaccccagcccctgcatataataatgcattgtcctaccaa 909  T

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Target: scaffold0092 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 435
Target Start/End: Original strand, 47355 - 47397
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaa 435  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  47355 tcgaaccccagcccctgcatataataatgcattgtcctaccaa 47397  T

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Target: scaffold0343 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 8617 - 8572
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaacta 438  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||    
T  8617 tcgaaccccaacccctacatataataatgcattgtcctatcaacta 8572  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 106785 - 106872
Alignment:
Q  487 aacttcacattgacacaagtaaattacgttaaggcccctgacggtagttaactaccgttgagaaaaccgtcggcagttaactgccgct 574  Q
    ||||||||| ||||||||  |||||||   || ||||||  |||||||||||||||||||| ||| ||| |  |||||||||||||||    
T  106785 aacttcacaatgacacaaaaaaattacccaaaagcccctagcggtagttaactaccgttgacaaagccgacaacagttaactgccgct 106872  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 7056 - 7097
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctacca 434  Q
    ||||||||| |||||| ||||||||||| |||||||||||||    
T  7056 tcgaacccccgcccctgcatataataatgcattgtcctacca 7097  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 43714 - 43778
Alignment:
Q  372 aataagtggagtattcaaggctcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||||||| || ||| ||| ||||||||||| || | ||||||||||| ||||||||||||||||    
T  43714 aataagtggggtgttcgaggttcgaaccccagtcc-tgcatataataatgcattgtcctaccaact 43778  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 510
Target Start/End: Complemental strand, 130614 - 130565
Alignment:
Q  461 atgaaaattgcttttttgacataagaaacttcacattgacacaagtaaat 510  Q
    |||||||||||||||||||||||  | |||||  ||||||||||||||||    
T  130614 atgaaaattgcttttttgacatagaatacttcctattgacacaagtaaat 130565  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 25083 - 25047
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcc 429  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  25083 tcgaaccccagcccctgcatataataatgcattgtcc 25047  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 159071 - 159027
Alignment:
Q  393 tcgaaccccagcccctacatataataatacattgtcctaccaact 437  Q
    ||||| ||| |||||| ||||||||||| ||||||||||||||||    
T  159071 tcgaaacccggcccctgcatataataatgcattgtcctaccaact 159027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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