View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12432_high_1 (Length: 466)
Name: NF12432_high_1
Description: NF12432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12432_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 44575929 - 44576372
Alignment:
| Q |
1 |
taatgagtgtgtgtaccttgcaagtgcaggaggatcccatgaagaaggaacagcttgaatgacttgtttagaaagaagaagtggatatggatcaatatga |
100 |
Q |
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| T |
44575929 |
taatgagtgtgtgtaccttgcaagtgcaggaggatcccatgaagaaggaacagcttgaatgacttgtttagaaagaagaagtggatatggatcaatatga |
44576028 |
T |
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| Q |
101 |
agattgaatagttttatcaaatatccatcaacacctaaacattttgtgttagctgcttcagctgcccatgaaccctcatcaaacccaaatactgtattaa |
200 |
Q |
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| T |
44576029 |
agattgaatagttttatcaaatatccatcaacacctaaacattttgtgttagctgcttcagctgcccatgaaccctcatcaaacccaaatactgtattga |
44576128 |
T |
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| Q |
201 |
aatatccacttggaattttcccaggtattgaactcttcctattgaataactctgacatctaaca-tcaaaatgttgagttaacatcaagttaattcgatc |
299 |
Q |
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| T |
44576129 |
aatatccacttggaattttcccaggtatcgaactcttcctattgaataactctgacatctaacattcaaaatgttgagttaacatcaag----ttcgatc |
44576224 |
T |
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| Q |
300 |
ggttgaaaggttagtaaagtctatcacatatataatgattgatatgaaatgagtgaattagctttagcttacttgggtgaaggtgaggatgtcggattga |
399 |
Q |
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| T |
44576225 |
ggttgaaaggttagtaaagtctatcacatatataatgattgatatgaaatgagtgaattagc-ttagcttacttgggtgaaggtgaggatgtcggattga |
44576323 |
T |
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| Q |
400 |
taacgtgtcctgtcgcctttatcacatttgatgtcaacggagacatctt |
448 |
Q |
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| T |
44576324 |
taacgtgtcctgtcgcctttatcacatttgatgtcaacggagacatctt |
44576372 |
T |
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