View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12432_low_4 (Length: 315)

Name: NF12432_low_4
Description: NF12432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12432_low_4
NF12432_low_4
[»] chr4 (38 HSPs)
chr4 (10-299)||(5647984-5648273)
chr4 (10-71)||(6430746-6430807)
chr4 (10-71)||(48598944-48599005)
chr4 (10-70)||(21646918-21646978)
chr4 (10-70)||(23501747-23501807)
chr4 (10-70)||(47528649-47528709)
chr4 (17-71)||(20224937-20224991)
chr4 (10-71)||(5306784-5306845)
chr4 (10-71)||(30639333-30639394)
chr4 (10-70)||(10660358-10660418)
chr4 (10-70)||(10874503-10874563)
chr4 (10-70)||(11054267-11054327)
chr4 (10-70)||(13256518-13256578)
chr4 (16-71)||(14590790-14590845)
chr4 (16-70)||(20405047-20405101)
chr4 (10-63)||(16408724-16408777)
chr4 (10-67)||(16911519-16911576)
chr4 (10-67)||(17315419-17315476)
chr4 (10-70)||(37494805-37494865)
chr4 (16-70)||(55766593-55766647)
chr4 (10-67)||(5313115-5313172)
chr4 (27-67)||(18969698-18969738)
chr4 (10-69)||(54966977-54967035)
chr4 (11-65)||(30352713-30352767)
chr4 (28-70)||(55830860-55830902)
chr4 (16-71)||(29879624-29879679)
chr4 (10-51)||(40915802-40915843)
chr4 (10-59)||(47441651-47441699)
chr4 (10-61)||(487256-487306)
chr4 (16-67)||(14983791-14983842)
chr4 (10-69)||(20373915-20373974)
chr4 (16-51)||(44363259-44363294)
chr4 (10-60)||(25343152-25343201)
chr4 (10-59)||(42164269-42164317)
chr4 (10-67)||(54730206-54730263)
chr4 (27-59)||(8473758-8473790)
chr4 (16-60)||(30496447-30496491)
chr4 (10-58)||(49938711-49938759)
[»] chr7 (40 HSPs)
chr7 (10-71)||(32758214-32758275)
chr7 (10-71)||(48735242-48735303)
chr7 (10-70)||(42798623-42798683)
chr7 (10-70)||(47077974-47078034)
chr7 (10-71)||(42495956-42496017)
chr7 (10-71)||(42805477-42805538)
chr7 (10-70)||(21172128-21172188)
chr7 (10-70)||(46354148-46354208)
chr7 (10-69)||(18326989-18327048)
chr7 (16-71)||(35334941-35334996)
chr7 (25-71)||(2541156-2541202)
chr7 (10-64)||(40463837-40463891)
chr7 (10-63)||(11617709-11617762)
chr7 (10-71)||(28078252-28078313)
chr7 (17-70)||(43557426-43557479)
chr7 (17-69)||(5180285-5180337)
chr7 (10-70)||(7193039-7193099)
chr7 (19-70)||(22699100-22699151)
chr7 (10-63)||(10693192-10693245)
chr7 (25-66)||(14732958-14732999)
chr7 (14-71)||(34626332-34626389)
chr7 (15-67)||(29140486-29140538)
chr7 (10-70)||(47716413-47716473)
chr7 (10-65)||(7794627-7794682)
chr7 (16-71)||(42476826-42476881)
chr7 (25-70)||(2663067-2663112)
chr7 (16-69)||(8149073-8149126)
chr7 (10-59)||(19427010-19427059)
chr7 (16-64)||(1424037-1424085)
chr7 (10-62)||(27629596-27629648)
chr7 (14-61)||(3469304-3469350)
chr7 (10-61)||(28362266-28362316)
chr7 (17-71)||(12473257-12473311)
chr7 (16-70)||(21447544-21447598)
chr7 (25-67)||(25198679-25198721)
chr7 (20-69)||(45019007-45019056)
chr7 (10-70)||(13805057-13805116)
chr7 (10-61)||(23419795-23419845)
chr7 (10-59)||(19265781-19265829)
chr7 (18-50)||(33872038-33872070)
[»] chr1 (44 HSPs)
chr1 (10-70)||(18944620-18944680)
chr1 (10-71)||(34725217-34725278)
chr1 (10-70)||(45812656-45812716)
chr1 (10-73)||(27474255-27474318)
chr1 (17-70)||(22930195-22930248)
chr1 (10-67)||(23768441-23768498)
chr1 (10-71)||(34714599-34714660)
chr1 (10-70)||(20004213-20004273)
chr1 (10-70)||(32632677-32632737)
chr1 (11-71)||(41319928-41319988)
chr1 (10-70)||(46991781-46991841)
chr1 (10-70)||(47214488-47214548)
chr1 (16-71)||(14617014-14617069)
chr1 (10-72)||(8197018-8197080)
chr1 (17-71)||(19932880-19932934)
chr1 (10-64)||(30395849-30395903)
chr1 (10-68)||(40424721-40424779)
chr1 (17-65)||(18742089-18742137)
chr1 (10-70)||(38478401-38478461)
chr1 (10-70)||(46248074-46248134)
chr1 (16-67)||(25290143-25290194)
chr1 (28-70)||(10668197-10668239)
chr1 (11-70)||(4430148-4430207)
chr1 (17-72)||(27201622-27201677)
chr1 (28-65)||(45402077-45402114)
chr1 (10-66)||(19414420-19414476)
chr1 (25-69)||(21723642-21723686)
chr1 (16-60)||(33222971-33223015)
chr1 (10-61)||(6983930-6983980)
chr1 (10-61)||(52910204-52910254)
chr1 (10-60)||(18724666-18724715)
chr1 (10-60)||(20036208-20036257)
chr1 (10-56)||(22151495-22151541)
chr1 (10-51)||(6925096-6925137)
chr1 (16-64)||(9939443-9939492)
chr1 (29-70)||(10163736-10163777)
chr1 (11-64)||(12126957-12127010)
chr1 (10-66)||(21006125-21006181)
chr1 (10-61)||(2435908-2435958)
chr1 (15-66)||(18335414-18335465)
chr1 (10-69)||(18335967-18336026)
chr1 (16-61)||(50811926-50811970)
chr1 (43-71)||(4349675-4349703)
chr1 (11-71)||(44485231-44485290)
[»] chr8 (29 HSPs)
chr8 (10-72)||(13160654-13160716)
chr8 (10-71)||(30454216-30454277)
chr8 (10-70)||(12670369-12670429)
chr8 (10-70)||(35261633-35261693)
chr8 (17-70)||(7136657-7136710)
chr8 (10-71)||(28817747-28817808)
chr8 (10-71)||(36720749-36720810)
chr8 (10-71)||(39461117-39461178)
chr8 (10-70)||(20869617-20869677)
chr8 (10-70)||(24245405-24245465)
chr8 (10-71)||(2626472-2626533)
chr8 (10-71)||(17823529-17823590)
chr8 (10-71)||(25250475-25250536)
chr8 (10-70)||(29521806-29521866)
chr8 (10-70)||(44530103-44530163)
chr8 (10-70)||(45071219-45071279)
chr8 (10-61)||(28407379-28407430)
chr8 (10-71)||(18164880-18164941)
chr8 (28-73)||(40605044-40605089)
chr8 (10-66)||(20284194-20284250)
chr8 (10-66)||(21070823-21070879)
chr8 (27-71)||(23286431-23286475)
chr8 (10-71)||(6760776-6760836)
chr8 (11-65)||(8897886-8897940)
chr8 (33-70)||(42840863-42840900)
chr8 (10-70)||(26954086-26954146)
chr8 (10-69)||(11748254-11748313)
chr8 (10-68)||(31454144-31454202)
chr8 (32-60)||(5688801-5688829)
[»] chr5 (23 HSPs)
chr5 (10-72)||(38879533-38879595)
chr5 (10-71)||(41014272-41014333)
chr5 (10-70)||(24448844-24448904)
chr5 (10-76)||(37024675-37024741)
chr5 (10-67)||(4619227-4619284)
chr5 (10-67)||(43334159-43334216)
chr5 (18-70)||(1565385-1565437)
chr5 (10-70)||(35710267-35710327)
chr5 (10-71)||(23974734-23974794)
chr5 (10-67)||(27328709-27328766)
chr5 (10-70)||(8170103-8170163)
chr5 (22-69)||(2838733-2838780)
chr5 (16-73)||(22861793-22861850)
chr5 (26-70)||(19438703-19438747)
chr5 (11-71)||(22187238-22187298)
chr5 (10-71)||(22600407-22600468)
chr5 (26-65)||(31299591-31299630)
chr5 (32-71)||(41956885-41956924)
chr5 (16-59)||(12006457-12006500)
chr5 (17-64)||(30006285-30006332)
chr5 (10-61)||(39079887-39079937)
chr5 (10-61)||(39301087-39301137)
chr5 (16-69)||(43574553-43574605)
[»] chr3 (30 HSPs)
chr3 (10-71)||(8247810-8247871)
chr3 (10-71)||(16735416-16735477)
chr3 (10-70)||(10870072-10870132)
chr3 (10-70)||(13730725-13730785)
chr3 (10-70)||(52926331-52926391)
chr3 (17-71)||(40272940-40272994)
chr3 (10-71)||(7697006-7697067)
chr3 (17-74)||(9607175-9607232)
chr3 (10-71)||(39203491-39203552)
chr3 (10-70)||(4495785-4495845)
chr3 (13-69)||(25517297-25517353)
chr3 (10-70)||(46421158-46421218)
chr3 (10-71)||(1217065-1217126)
chr3 (10-71)||(22609742-22609802)
chr3 (10-70)||(12914156-12914216)
chr3 (10-57)||(26869696-26869743)
chr3 (10-69)||(29366843-29366902)
chr3 (10-71)||(5173841-5173903)
chr3 (10-71)||(13628913-13628975)
chr3 (10-72)||(12525384-12525443)
chr3 (25-67)||(21874999-21875041)
chr3 (25-70)||(6411957-6412002)
chr3 (31-71)||(9276249-9276289)
chr3 (18-66)||(22123044-22123092)
chr3 (30-67)||(23871418-23871455)
chr3 (10-71)||(26573103-26573163)
chr3 (10-71)||(45620950-45621010)
chr3 (11-55)||(11461763-11461807)
chr3 (26-70)||(39430465-39430509)
chr3 (16-48)||(53062036-53062068)
[»] chr2 (31 HSPs)
chr2 (10-71)||(14530271-14530332)
chr2 (10-71)||(25079839-25079900)
chr2 (10-70)||(8455437-8455497)
chr2 (10-70)||(12024039-12024099)
chr2 (10-68)||(11514392-11514450)
chr2 (10-72)||(21779380-21779442)
chr2 (10-67)||(25249858-25249915)
chr2 (10-69)||(10543653-10543712)
chr2 (17-76)||(23397714-23397773)
chr2 (25-71)||(39189557-39189603)
chr2 (12-69)||(14544018-14544075)
chr2 (10-71)||(22371010-22371071)
chr2 (10-70)||(17705449-17705509)
chr2 (17-64)||(27573581-27573628)
chr2 (17-70)||(7214488-7214541)
chr2 (25-70)||(9671134-9671179)
chr2 (10-70)||(5840982-5841042)
chr2 (16-68)||(17896215-17896267)
chr2 (10-69)||(24200746-24200805)
chr2 (11-70)||(26684744-26684803)
chr2 (10-68)||(19977835-19977893)
chr2 (25-70)||(27466266-27466311)
chr2 (10-53)||(17667973-17668016)
chr2 (14-65)||(39499339-39499390)
chr2 (16-58)||(39914433-39914475)
chr2 (10-52)||(44604826-44604868)
chr2 (19-60)||(24860116-24860157)
chr2 (10-53)||(17623535-17623578)
chr2 (10-49)||(40416992-40417031)
chr2 (15-61)||(4516477-4516522)
chr2 (10-46)||(5450263-5450299)
[»] scaffold0168 (1 HSPs)
scaffold0168 (10-70)||(30533-30593)
[»] chr6 (24 HSPs)
chr6 (10-70)||(1346918-1346978)
chr6 (10-70)||(1354876-1354936)
chr6 (16-71)||(8409196-8409251)
chr6 (10-68)||(3815198-3815256)
chr6 (10-71)||(9161076-9161137)
chr6 (10-66)||(20400625-20400681)
chr6 (10-70)||(33922949-33923009)
chr6 (16-71)||(14975207-14975262)
chr6 (10-60)||(12222038-12222088)
chr6 (17-66)||(24734591-24734640)
chr6 (18-70)||(1941809-1941861)
chr6 (16-71)||(22967124-22967179)
chr6 (16-71)||(23821214-23821269)
chr6 (10-71)||(29355978-29356040)
chr6 (16-69)||(13905106-13905158)
chr6 (17-70)||(15866165-15866218)
chr6 (16-70)||(6024187-6024241)
chr6 (10-67)||(12063424-12063481)
chr6 (10-59)||(14553477-14553525)
chr6 (14-67)||(32728281-32728334)
chr6 (16-60)||(19649294-19649338)
chr6 (10-65)||(2166533-2166587)
chr6 (10-65)||(2178166-2178220)
chr6 (16-54)||(8417442-8417480)
[»] scaffold0057 (2 HSPs)
scaffold0057 (17-71)||(24895-24949)
scaffold0057 (10-61)||(46794-46845)
[»] scaffold0024 (1 HSPs)
scaffold0024 (10-71)||(83828-83889)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-71)||(226533-226588)
[»] scaffold0258 (2 HSPs)
scaffold0258 (10-68)||(13144-13202)
scaffold0258 (27-69)||(17507-17549)
[»] scaffold0187 (4 HSPs)
scaffold0187 (10-71)||(8898-8959)
scaffold0187 (10-67)||(10169-10226)
scaffold0187 (10-71)||(19226-19287)
scaffold0187 (10-67)||(20497-20554)
[»] scaffold0116 (1 HSPs)
scaffold0116 (10-70)||(8848-8905)
[»] scaffold0311 (1 HSPs)
scaffold0311 (10-61)||(10773-10824)
[»] scaffold0194 (1 HSPs)
scaffold0194 (10-69)||(24619-24678)
[»] scaffold0049 (1 HSPs)
scaffold0049 (10-65)||(58936-58991)
[»] scaffold1176 (1 HSPs)
scaffold1176 (17-62)||(1713-1758)
[»] scaffold0223 (1 HSPs)
scaffold0223 (10-63)||(11093-11145)
[»] scaffold0036 (1 HSPs)
scaffold0036 (10-70)||(35139-35200)
[»] scaffold0018 (1 HSPs)
scaffold0018 (29-62)||(73001-73034)
[»] scaffold0254 (1 HSPs)
scaffold0254 (10-65)||(4117-4171)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-66)||(43085-43137)


Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 5648273 - 5647984
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcacataagttcgtatcaataatcagagaaaaagaattaat 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5648273 gaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcacataagttcgtatcaataatcagagaaaaagaattaat 5648174  T
Q  110 cagaaaacaagaatctatttctttaagaaccaatttgtcgcataagttcgtatttctcttaaacatgttttctttttaaaatgacaattgttagtgttat 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5648173 cagaaaacaagaatctatttctttgagaaccaatttgtcgcataagttcgtatttctcttaaacatgttttctttttaaaatgacaattgttagtgttat 5648074  T
Q  210 tgttgtaggttgggataaaatcatcaaccgttttatcacttcactccttaacatatccattccaaccaccaagtcaaccttagttcttat 299  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5648073 tgttgtaggttgggataaaatcatcaaccgttttattacttcactccttaacatatccattccaaccaccaagtcaaccttagttcttat 5647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 6430746 - 6430807
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6430746 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 6430807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 48598944 - 48599005
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48598944 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 48599005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 21646978 - 21646918
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  21646978 gaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 21646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 23501807 - 23501747
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23501807 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 23501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 47528649 - 47528709
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  47528649 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 47528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 20224991 - 20224937
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20224991 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 20224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 5306784 - 5306845
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  5306784 gaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttacccctca 5306845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 30639394 - 30639333
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30639394 gaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttacccctca 30639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 10660418 - 10660358
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10660418 gaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 10874563 - 10874503
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10874563 gaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10874503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 11054267 - 11054327
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11054267 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 11054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 13256518 - 13256578
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  13256518 gaacctatgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 13256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 14590845 - 14590790
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14590845 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccactca 14590790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 20405101 - 20405047
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  20405101 gtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 20405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 16408724 - 16408777
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtt 63  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16408724 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 16911576 - 16911519
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  16911576 gaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 16911519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 17315419 - 17315476
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  17315419 gaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 37494865 - 37494805
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||    
T  37494865 gaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttacccctc 37494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 55766593 - 55766647
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||    
T  55766593 gtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttacccctc 55766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 5313115 - 5313172
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  5313115 gaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 18969738 - 18969698
Alignment:
Q  27 gtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccc 18969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 54967035 - 54966977
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  54967035 gaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggttccccct 54966977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 30352713 - 30352767
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    |||| |||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  30352713 aacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 55830860 - 55830902
Alignment:
Q  28 tcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  55830860 tcacatgacaacaactttaccagttgcgtcaaggttacccctc 55830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 29879624 - 29879679
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||  ||||||||||||||||||||| ||||||| |||| |||||||||||    
T  29879624 gtgaccttctagtcacatgacaacaactttatcagttgcaccaatgttacccctca 29879679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 40915843 - 40915802
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagt 51  Q
    ||||| ||||||||| ||||||||||||||||||||||||||    
T  40915843 gaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 47441651 - 47441699
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaa 59  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  47441651 gaacctgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 487256 - 487306
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| |||||||| |||||||||||||||||||||||| ||| ||||||||    
T  487256 gaacccgtgacctttcagtcacatgacaacaactttacc-gttacgccaagg 487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 14983842 - 14983791
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||| || ||| |||||||||||||||||||||  |||||||||||||    
T  14983842 gtgaccttccaatcatatgacaacaactttaccagttctgccaaggttaccc 14983791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 20373915 - 20373974
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||| |||||| || |||||| |||| |||||||| |||||||||||||| |||||||||    
T  20373915 gaacatgtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagttacccct 20373974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 44363259 - 44363294
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagt 51  Q
    |||||||| |||||||||||||||||||||||||||    
T  44363259 gtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 25343201 - 25343152
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    |||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  25343201 gaacctgtgacctatcagtcacgtgacaacaactttacca-ttgcgccaag 25343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 42164269 - 42164317
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaa 59  Q
    ||||| |||||||| ||||||||||||||||| |||||| ||||||||||    
T  42164269 gaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 54730263 - 54730206
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| ||||||||   ||||||||||||||||||||||  ||||||||| |||||||    
T  54730263 gaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagttaccc 54730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 8473758 - 8473790
Alignment:
Q  27 gtcacatgacaacaactttaccagttgcgccaa 59  Q
    |||| ||||||||||||||||||||||||||||    
T  8473758 gtcatatgacaacaactttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 30496447 - 30496491
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    |||||||| ||||||| |||||||||||||  |||||||||||||    
T  30496447 gtgacctttcagtcacgtgacaacaacttttacagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 49938711 - 49938759
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgcca 58  Q
    |||||||||||||| ||||||| |||||||||||||  | |||||||||    
T  49938711 gaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 32758275 - 32758214
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32758275 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 32758214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 48735242 - 48735303
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48735242 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 48735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 42798683 - 42798623
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42798683 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 42798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 47077974 - 47078034
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47077974 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 47078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 42495956 - 42496017
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42495956 gaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctca 42496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 42805538 - 42805477
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  42805538 gaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctca 42805477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 21172128 - 21172188
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  21172128 gaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 21172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 46354208 - 46354148
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  46354208 gaacccgtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttacccctc 46354148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 18327048 - 18326989
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  18327048 gaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttacccct 18326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 35334941 - 35334996
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  35334941 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctca 35334996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 2541156 - 2541202
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2541156 cagtcacatgacaacaactttaccagttgcgccaaggttacccctca 2541202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 40463891 - 40463837
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 64  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40463891 gaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 11617709 - 11617762
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtt 63  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  11617709 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 28078252 - 28078313
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  28078252 gaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgccagggttacccctca 28078313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 43557479 - 43557426
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43557479 tgacctttcagtcacatgacaacaactttaccagttgcggcaaggttacccctc 43557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 5180285 - 5180337
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  5180285 tgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccct 5180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 7193099 - 7193039
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  7193099 gaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttacccctc 7193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 22699100 - 22699151
Alignment:
Q  19 accttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  22699100 acctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 22699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 10693192 - 10693245
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtt 63  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10693192 gaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 14732958 - 14732999
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14732958 cagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 34626332 - 34626389
Alignment:
Q  14 ctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  34626332 ctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttacccctca 34626389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 29140486 - 29140538
Alignment:
Q  15 tgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  29140486 tgtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccc 29140538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 47716473 - 47716413
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||    
T  47716473 gaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttacccctc 47716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 7794627 - 7794682
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  7794627 gaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 42476881 - 42476826
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||    
T  42476881 gtgaccttttagtcacatgacaacaactttaccagttacgccaatgttacccctca 42476826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 2663067 - 2663112
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  2663067 cagtcacataacaacaactttactagttgcgccaaggttacccctc 2663112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 8149073 - 8149126
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  8149073 gtgactttgcagtcacatgacaacaacattaccagttgtgccaaggttacccct 8149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 19427010 - 19427059
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaa 59  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  19427010 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 1424037 - 1424085
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 64  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  1424037 gtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 27629648 - 27629596
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggt 62  Q
    ||||| |||||||| | |||| |||||||||||||||||||||||||||||||    
T  27629648 gaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 3469304 - 3469350
Alignment:
Q  14 ctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  3469304 ctgtgacctttcagtcacatgacaacaactttacc-gttgcgccaagg 3469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 28362266 - 28362316
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  28362266 gaacctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 12473311 - 12473257
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||| |||  ||||||||||||||||||| |||||||||||| |||||||||    
T  12473311 tgacctttcagatacatgacaacaactttaccggttgcgccaaggctacccctca 12473257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 21447598 - 21447544
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||| || | |||||||||||| |||| |||||||||||||||||||||||    
T  21447598 gtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttacccctc 21447544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 25198721 - 25198679
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  25198721 cagtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 45019007 - 45019056
Alignment:
Q  20 ccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||||||    
T  45019007 ccttccagtcacatgacaggacctttaccagttgcgccaaggttacccct 45019056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 13805116 - 13805057
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| || ||||| ||||||||||||||||||||||||| ||||||||||| | ||||||    
T  13805116 gaacccgttacctttcagtcacatgacaacaactttacca-ttgcgccaaggctccccctc 13805057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 23419795 - 23419845
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||||||||||||  |||||||||||| |||||||||| ||||||||||||    
T  23419795 gaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 19265829 - 19265781
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaa 59  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||    
T  19265829 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 33872038 - 33872070
Alignment:
Q  18 gaccttacagtcacatgacaacaactttaccag 50  Q
    |||||| ||||||||||||||||||||||||||    
T  33872038 gacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 18944680 - 18944620
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18944680 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 18944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 34725217 - 34725278
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34725217 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 34725278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 45812656 - 45812716
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  45812656 gaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccctc 45812716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 27474318 - 27474255
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcaca 73  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  27474318 gaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttacccctcaca 27474255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 22930195 - 22930248
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22930195 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 22930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 23768441 - 23768498
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  23768441 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccc 23768498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 34714660 - 34714599
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  34714660 gaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttacccctca 34714599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 20004213 - 20004273
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  20004213 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 20004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 32632677 - 32632737
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  32632677 gaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctc 32632737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 41319928 - 41319988
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  41319928 aacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttacccctca 41319988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 46991841 - 46991781
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  46991841 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 46991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 47214548 - 47214488
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  47214548 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 47214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 14617069 - 14617014
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14617069 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccctca 14617014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 8197080 - 8197018
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 72  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  8197080 gaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttacccctcac 8197018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 19932880 - 19932934
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  19932880 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaacccctca 19932934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 30395849 - 30395903
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 64  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30395849 gaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 40424779 - 40424721
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40424779 gaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 40424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 18742089 - 18742137
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18742089 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 38478401 - 38478461
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  38478401 gaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttacccctc 38478461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 46248074 - 46248134
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  46248074 gaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttacccctc 46248134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 25290194 - 25290143
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  25290194 gtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttaccc 25290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 10668239 - 10668197
Alignment:
Q  28 tcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10668239 tcacatgacaacaactttaccagttgcgccaaggttacccctc 10668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 4430148 - 4430207
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||    
T  4430148 aacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaagattaaccctc 4430207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 27201677 - 27201622
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 72  Q
    ||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||    
T  27201677 tgacctttcagtcacatgacaacaactttaccatttacgctaaggttacccctcac 27201622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 45402114 - 45402077
Alignment:
Q  28 tcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45402114 tcacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 19414476 - 19414420
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    ||||| |||||||| |||||| |||||||||||||||||| || |||||||||||||    
T  19414476 gaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 21723686 - 21723642
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||||||||||||||||||||||||||| || ||||||||||||    
T  21723686 cagtcacatgacaacaactttaccagttgtgcgaaggttacccct 21723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 33223015 - 33222971
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  33223015 gtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 6983930 - 6983980
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  6983930 gaacctgtgacctttcagtcacgtgacaacaactttacca-ttgcgccaagg 6983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 52910254 - 52910204
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  52910254 gaacctgtgacctttcagtcacatgacaacaactttacc-gttgcaccaagg 52910204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 18724666 - 18724715
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  18724666 gaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaag 18724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 20036257 - 20036208
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  20036257 gaacccgtgacctttcagtcacatgacaacaactttacca-ttgcgccaag 20036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 22151541 - 22151495
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgc 56  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||    
T  22151541 gaacctatgaccttacagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 6925137 - 6925096
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagt 51  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  6925137 gaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 9939492 - 9939443
Alignment:
Q  16 gtgaccttacagtcacatgacaacaac-tttaccagttgcgccaaggtta 64  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  9939492 gtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 10163777 - 10163736
Alignment:
Q  29 cacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  10163777 cacatgacaacaactttatcagttgcgccaatgttacccctc 10163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 12126957 - 12127010
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 64  Q
    |||| |||||||| || | |||||||||||||||||| ||||||||||||||||    
T  12126957 aacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 21006181 - 21006125
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    |||||| ||||||| ||||| ||||||||||| |||||| |||||| ||||||||||    
T  21006181 gaacctttgacctttcagtcgcatgacaacaattttaccggttgcgtcaaggttacc 21006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 2435908 - 2435958
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||    
T  2435908 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 18335414 - 18335465
Alignment:
Q  15 tgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    ||||||||| ||| |||||||||| ||||||| || ||||||||||||||||    
T  18335414 tgtgacctttcagacacatgacaaaaactttatcacttgcgccaaggttacc 18335465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 18335967 - 18336026
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||| ||||||||| ||| |||||| ||||||||||| || |||||||||| ||||||||    
T  18335967 gaacatgtgacctttcagacacatggcaacaactttatcacttgcgccaagattacccct 18336026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 50811970 - 50811926
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||    
T  50811970 gtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 50811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 4349703 - 4349675
Alignment:
Q  43 tttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||||||||||||||||||    
T  4349703 tttaccagttgcgccaaggttacccctca 4349675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 44485231 - 44485290
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||| |||||||| || ||||||||||||||||||| | |||||||||||| | |||||||    
T  44485231 aacccgtgacctttcaatcacatgacaacaacttta-ctgttgcgccaaggctccccctca 44485290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 13160716 - 13160654
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13160716 gaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttacccctcac 13160654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 30454216 - 30454277
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30454216 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 30454277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 12670369 - 12670429
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12670369 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 35261693 - 35261633
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35261693 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 35261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 7136657 - 7136710
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7136657 tgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 28817747 - 28817808
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  28817747 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctca 28817808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 36720810 - 36720749
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  36720810 gaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctca 36720749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 39461117 - 39461178
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  39461117 gaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttacccctca 39461178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 20869617 - 20869677
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  20869617 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttatccctc 20869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 24245465 - 24245405
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  24245465 gaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttacccctc 24245405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 2626533 - 2626472
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  2626533 gaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttacccctca 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 17823590 - 17823529
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  17823590 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattacccctca 17823529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 25250536 - 25250475
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25250536 gaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggttacctctca 25250475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 29521806 - 29521866
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  29521806 gaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttacccctc 29521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 44530163 - 44530103
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||    
T  44530163 gaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttacccctc 44530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 45071279 - 45071219
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  45071279 gaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttacccctc 45071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 28407430 - 28407379
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  28407430 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 18164880 - 18164941
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  18164880 gaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagattacccctca 18164941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 40605044 - 40605089
Alignment:
Q  28 tcacatgacaacaactttaccagttgcgccaaggttacccctcaca 73  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  40605044 tcacatgacaacaactttaccagttgcgccaaagttacccctcaca 40605089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 20284194 - 20284250
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  20284194 gaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 21070823 - 21070879
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  21070823 gaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 23286431 - 23286475
Alignment:
Q  27 gtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttacccctca 23286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 6760836 - 6760776
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| ||||||||  ||||| |||||||||||||||||||||||||||| |||||||||||    
T  6760836 gaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa-gttacccctca 6760776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 8897886 - 8897940
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    |||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||    
T  8897886 aacccgtgaccttgctgtcacatgacaacaactttaccagttgtgccagggttac 8897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 42840900 - 42840863
Alignment:
Q  33 tgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  42840900 tgacaacaactttactagttgcgccaaggttacccctc 42840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 26954146 - 26954086
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||||  | |||||||||||||||||||||| || |||||| ||||||||||    
T  26954146 gaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttacccctc 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 11748313 - 11748254
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| ||||| || ||||||||||||||||| || ||||||||| |||| |||||||||    
T  11748313 gaacccgtgacatttcagtcacatgacaacaatttcaccagttgcaccaaagttacccct 11748254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 31454202 - 31454144
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    |||| ||||||||| ||  ||||||||||||||| |||| ||||||||||| |||||||    
T  31454202 gaacatgtgacctttcaaccacatgacaacaactataccggttgcgccaagattacccc 31454144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 5688829 - 5688801
Alignment:
Q  32 atgacaacaactttaccagttgcgccaag 60  Q
    |||||||||||||||||||||||||||||    
T  5688829 atgacaacaactttaccagttgcgccaag 5688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38879595 - 38879533
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 72  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38879595 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 38879533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 41014333 - 41014272
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41014333 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 41014272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 24448904 - 24448844
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24448904 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24448844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 37024675 - 37024741
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcacataa 76  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  37024675 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctcaaataa 37024741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 4619227 - 4619284
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4619227 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 4619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 43334216 - 43334159
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43334216 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 43334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 1565437 - 1565385
Alignment:
Q  18 gaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1565437 gacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 35710327 - 35710267
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  35710327 gaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 35710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 23974794 - 23974734
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23974794 gaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttacccctca 23974734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 27328766 - 27328709
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  27328766 gaacctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttaccc 27328709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 8170103 - 8170163
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  8170103 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggttagccctc 8170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 2838780 - 2838733
Alignment:
Q  22 ttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2838780 ttacagtcacatgacaacaactttaccggttgcgccaaggttacccct 2838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 22861793 - 22861850
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcaca 73  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  22861793 gtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttacccttcaca 22861850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 19438747 - 19438703
Alignment:
Q  26 agtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  19438747 agtcatatgacaacaactttaccagttgcgccaaggttacccctc 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22187298 - 22187238
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||| |||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||    
T  22187298 aaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttacccctca 22187238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 22600468 - 22600407
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| || ||||| ||||||||||| |||||||||||||||| || |||||||||||||||    
T  22600468 gaacccgtaaccttccagtcacatgataacaactttaccagttacgtcaaggttacccctca 22600407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 31299630 - 31299591
Alignment:
Q  26 agtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  31299630 agtcacatgacaacaactttaccagttgcaccaaggttac 31299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 41956924 - 41956885
Alignment:
Q  32 atgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  41956924 atgacaacaactttaccagttgcgccaatgttacccctca 41956885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 12006457 - 12006500
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaa 59  Q
    |||||||| |||||||||||||||||||| | ||||||||||||    
T  12006457 gtgacctttcagtcacatgacaacaacttgagcagttgcgccaa 12006500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 30006332 - 30006285
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 64  Q
    ||||||| ||||||||||||||||| |||| |||||||||||| ||||    
T  30006332 tgacctttcagtcacatgacaacaaatttatcagttgcgccaatgtta 30006285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 39079887 - 39079937
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| |||||||| | |||||||||||||||||||||| ||||||||||||    
T  39079887 gaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 39301137 - 39301087
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||||    
T  39301137 gaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 43574605 - 43574553
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||||||| ||||||| |||||||||||||| || ||||||||||| |||||||    
T  43574605 gtgacctttcagtcacgtgacaacaactttatca-ttgcgccaaggctacccct 43574553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 8247810 - 8247871
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8247810 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 8247871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 16735477 - 16735416
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16735477 gaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 16735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 10870072 - 10870132
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10870072 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 13730725 - 13730785
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13730725 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 13730785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 52926331 - 52926391
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52926331 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 52926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 40272940 - 40272994
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40272940 tgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 40272994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 7697006 - 7697067
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  7697006 gaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttacccctca 7697067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 9607232 - 9607175
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcacat 74  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9607232 tgacctttcagtcacatgacaacaactttacaagttgcgccaaggttacccctcacat 9607175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 39203552 - 39203491
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  39203552 gaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttacccctca 39203491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 4495785 - 4495845
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  4495785 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttacccctc 4495845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 25517297 - 25517353
Alignment:
Q  13 cctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  25517297 cctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccct 25517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 46421158 - 46421218
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  46421158 gaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttacccctc 46421218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 1217126 - 1217065
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  1217126 gaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttacccctca 1217065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 22609802 - 22609742
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22609802 gaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttacccctca 22609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 12914156 - 12914216
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||    
T  12914156 gaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttacccctc 12914216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 26869743 - 26869696
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgcc 57  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  26869743 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 29366843 - 29366902
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  29366843 gaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttacccct 29366902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 5173841 - 5173903
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaac-tttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  5173841 gaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttacccctca 5173903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 13628913 - 13628975
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaac-tttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  13628913 gaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttacccctca 13628975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 12525443 - 12525384
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 72  Q
    |||||||||||||| |||||| ||||||||   ||||||||||||||||||||||||||||||    
T  12525443 gaacctgtgacctttcagtcatatgacaac---tttaccagttgcgccaaggttacccctcac 12525384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 21875041 - 21874999
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  21875041 cagtcacatgacaacaactttaccagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 6411957 - 6412002
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||    
T  6411957 cagttacatgacaacaactttaccagttgcgtcaaggttacccctc 6412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 9276289 - 9276249
Alignment:
Q  31 catgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  9276289 catgacaacaactttactagttgcgccaaggttacccctca 9276249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 22123044 - 22123092
Alignment:
Q  18 gaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  22123044 gacctttcagtcacatgacaacaaatttaccagtggcgccaaggttacc 22123092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 23871455 - 23871418
Alignment:
Q  30 acatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||||||||||||| |||||||||||||||||||    
T  23871455 acatgacaacaactttactagttgcgccaaggttaccc 23871418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 26573163 - 26573103
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| ||||||| |||||||||||||||| |||||||||||| | |||||||    
T  26573163 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagggtccccctca 26573103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 45620950 - 45621010
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| ||||||| |||||||||||||||| |||||||||||| | |||||||    
T  45620950 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaaggctccccctca 45621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 11461763 - 11461807
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcg 55  Q
    ||||||| ||||| | |||| ||||||||||||||||||||||||    
T  11461763 aacctgtaaccttcctgtcatatgacaacaactttaccagttgcg 11461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 39430509 - 39430465
Alignment:
Q  26 agtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||| ||||||||||||||||| ||| ||||||||||    
T  39430509 agtcagatgacagcaactttaccagttgcgtcaaagttacccctc 39430465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 53062068 - 53062036
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttacc 48  Q
    |||||||| ||||||||||||||||||||||||    
T  53062068 gtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 14530332 - 14530271
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14530332 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 14530271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 25079839 - 25079900
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25079839 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 25079900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 8455437 - 8455497
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8455437 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 12024039 - 12024099
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12024039 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12024099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 11514450 - 11514392
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11514450 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccc 11514392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 21779380 - 21779442
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 72  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  21779380 gaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttacccctcac 21779442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 25249858 - 25249915
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25249858 gaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggttaccc 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 10543712 - 10543653
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  10543712 gaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccct 10543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 23397773 - 23397714
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcacataa 76  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  23397773 tgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctcatataa 23397714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 39189557 - 39189603
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39189557 cagtcacatgacaacaactttaccagttgcgccaaggttacccctca 39189603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 14544075 - 14544018
Alignment:
Q  12 acctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  14544075 acctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttacccct 14544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 22371071 - 22371010
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  22371071 gaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggttacccctca 22371010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 17705509 - 17705449
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  17705509 gaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttacccctc 17705449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 27573628 - 27573581
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggtta 64  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27573628 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 7214541 - 7214488
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7214541 tgacctttcagtcacatgacaacaactttaccagttgtgccaaagttacccctc 7214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 9671179 - 9671134
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  9671179 cagtcacatgacaacaactttaccggttgcgccaaggttacccctc 9671134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 5841042 - 5840982
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| |||||||||||||||||||||| || |||| |||||||||||||||    
T  5841042 gaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttacccctc 5840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 17896267 - 17896215
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  17896267 gtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggttacccc 17896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 24200746 - 24200805
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||  |||||||||||||    
T  24200746 gaacccgtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttacccct 24200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 26684744 - 26684803
Alignment:
Q  11 aacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||| || ||||||||||    
T  26684744 aacctttgacctttcaatcacatgacaacaactttaccagttgcgctaaagttacccctc 26684803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 19977835 - 19977893
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    ||||| |||||||| | |||||||||||||||||| ||||||| |||||||||||||||    
T  19977835 gaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggttacccc 19977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 27466266 - 27466311
Alignment:
Q  25 cagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27466266 cagtcacatgacaacaactttaccagttgcgccaatgttacgcctc 27466311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 17668016 - 17667973
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttg 53  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  17668016 gaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 39499339 - 39499390
Alignment:
Q  14 ctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||| ||||    
T  39499339 ctgtgaccttaaaatcacatgataacaactttaccagttgcgccaagattac 39499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 39914433 - 39914475
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgcca 58  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  39914433 gtgaccttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 44604868 - 44604826
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagtt 52  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  44604868 gaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 24860116 - 24860157
Alignment:
Q  19 accttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  24860116 accttccagtcacatgacaacaattttaccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 17623578 - 17623535
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttg 53  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||    
T  17623578 gaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 40416992 - 40417031
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttacca 49  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  40416992 gaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 4516477 - 4516522
Alignment:
Q  15 tgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  4516477 tgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 4516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 5450299 - 5450263
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaacttta 46  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  5450299 gaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 30593 - 30533
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30593 gaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 1346978 - 1346918
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1346978 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1346918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 1354876 - 1354936
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1354876 gaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1354936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 8409251 - 8409196
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  8409251 gtgacctttcagtcacattacaacaactttaccagttgcgccaaggttacccctca 8409196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 3815198 - 3815256
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3815198 gaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttacccc 3815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 9161137 - 9161076
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  9161137 gaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttacccctca 9161076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 20400681 - 20400625
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  20400681 gaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaaggttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 33922949 - 33923009
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||||    
T  33922949 gaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttacccctc 33923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 14975207 - 14975262
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  14975207 gtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttatccctca 14975262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 12222038 - 12222088
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  12222038 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 24734640 - 24734591
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacc 66  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 1941861 - 1941809
Alignment:
Q  18 gaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||    
T  1941861 gaccttccagtcagatgacaacaactttaccagttgcaccaaggttacccctc 1941809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 22967179 - 22967124
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||    
T  22967179 gtgaccttacagtcacatgacaataactttatcagatgcgcgaaggttacccctca 22967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 23821214 - 23821269
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||    
T  23821214 gtgaccttacagtcacatgacaataactttatcagatgcgcgaaggttacccctca 23821269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 29355978 - 29356040
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaacttt-accagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  29355978 gaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttacccctca 29356040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 13905106 - 13905158
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  13905106 gtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggttccccct 13905158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 15866165 - 15866218
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||| || ||||||| |||||||||||||||||| ||||||||||||||||    
T  15866165 tgacctttcaatcacatgccaacaactttaccagttgggccaaggttacccctc 15866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 6024241 - 6024187
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    |||||||| || |||||||||||||||||||||||||||| |||  |||||||||    
T  6024241 gtgaccttccaatcacatgacaacaactttaccagttgcgtcaaaattacccctc 6024187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 12063481 - 12063424
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||    
T  12063481 gaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccc 12063424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 14553525 - 14553477
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaa 59  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  14553525 gaacctgtgaccttt-agtcacatgacaacaactttaccagttgcaccaa 14553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 32728281 - 32728334
Alignment:
Q  14 ctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    |||||||||| |||||||||||||||||||||||  ||| | ||||||||||||    
T  32728281 ctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttaccc 32728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 19649294 - 19649338
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaag 60  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||    
T  19649294 gtgatctttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 2166533 - 2166587
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  2166533 gaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 2178166 - 2178220
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  2178166 gaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 8417480 - 8417442
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgc 54  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  8417480 gtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 24895 - 24949
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24895 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 24949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 46845 - 46794
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||||||||    
T  46845 gaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 83889 - 83828
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  83889 gaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttacccctca 83828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 226533 - 226588
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  226533 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccactca 226588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 13144 - 13202
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccc 68  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13144 gaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccc 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 17507 - 17549
Alignment:
Q  27 gtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    |||||||||||||||||||| ||||||||  ||||||||||||    
T  17507 gtcacatgacaacaactttagcagttgcgttaaggttacccct 17549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 8959 - 8898
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  8959 gaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctca 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 10169 - 10226
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  10169 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 19287 - 19226
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 71  Q
    ||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  19287 gaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttacccctca 19226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 20497 - 20554
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 67  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20497 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 8905 - 8848
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctc 70  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||    
T  8905 gaacctgtgaccttacagtcacatgacaacaactttacca---gcgtcaaggttacccctc 8848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 10824 - 10773
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaagg 61  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  10824 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 24678 - 24619
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccct 69  Q
    ||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||||||    
T  24678 gaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttacccct 24619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 58991 - 58936
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||| |||||||| |||||||||||||| || |||||||||||| ||||||||||    
T  58991 gaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggttac 58936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 1713 - 1758
Alignment:
Q  17 tgaccttacagtcacatgacaacaactttaccagttgcgccaaggt 62  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  1713 tgacctttcagtcacatgacaacaactttaccaattgcgtcaaggt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 11145 - 11093
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggtt 63  Q
    ||||| |||||||| ||||||||| | |||||||||||||||||||||||||||    
T  11145 gaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 35139 - 35200
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaa-caactttaccagttgcgccaaggttacccctc 70  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| |||| |||| |||||    
T  35139 gaacccgtgaccttacagtcacatgacaataaactttaccagttgcaccaaagttatccctc 35200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 73001 - 73034
Alignment:
Q  29 cacatgacaacaactttaccagttgcgccaaggt 62  Q
    ||||||||||||||||||||||||||||||||||    
T  73001 cacatgacaacaactttaccagttgcgccaaggt 73034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 4171 - 4117
Alignment:
Q  10 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttac 65  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  4171 gaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 43137 - 43085
Alignment:
Q  16 gtgaccttacagtcacatgacaacaactttaccagtt--gcgccaaggttacc 66  Q
    |||||||| || ||||||||||| |||||||||||||  ||||||||||||||    
T  43137 gtgacctttcaatcacatgacaataactttaccagttgcgcgccaaggttacc 43085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University