View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12432_low_7 (Length: 268)

Name: NF12432_low_7
Description: NF12432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12432_low_7
NF12432_low_7
[»] chr8 (14 HSPs)
chr8 (5-253)||(39774084-39774332)
chr8 (27-253)||(5157306-5157532)
chr8 (4-109)||(39773614-39773719)
chr8 (5-109)||(5157886-5157990)
chr8 (5-105)||(5156601-5156701)
chr8 (5-105)||(5157146-5157246)
chr8 (5-105)||(28824174-28824274)
chr8 (5-105)||(28824719-28824819)
chr8 (5-105)||(38376256-38376356)
chr8 (5-105)||(44446017-44446117)
chr8 (5-105)||(44446562-44446661)
chr8 (5-93)||(29556121-29556209)
chr8 (5-105)||(29555557-29555657)
chr8 (5-105)||(38376809-38376909)
[»] chr5 (11 HSPs)
chr5 (5-253)||(3341635-3341883)
chr5 (5-253)||(3358544-3358792)
chr5 (5-109)||(3342248-3342352)
chr5 (5-109)||(3359157-3359261)
chr5 (5-105)||(4275614-4275714)
chr5 (5-105)||(4276166-4276266)
chr5 (5-105)||(31230032-31230132)
chr5 (5-105)||(2600881-2600981)
chr5 (5-105)||(2601434-2601534)
chr5 (5-105)||(31229479-31229579)
chr5 (66-108)||(5233878-5233920)
[»] chr2 (12 HSPs)
chr2 (5-253)||(21647650-21647898)
chr2 (5-253)||(15321863-15322111)
chr2 (5-253)||(29982670-29982918)
chr2 (5-253)||(37644924-37645172)
chr2 (5-109)||(21648263-21648367)
chr2 (5-109)||(29982201-29982305)
chr2 (5-109)||(37644455-37644559)
chr2 (5-109)||(15322554-15322658)
chr2 (5-105)||(1389001-1389101)
chr2 (5-105)||(22424636-22424736)
chr2 (5-105)||(22424083-22424183)
chr2 (7-105)||(25217006-25217104)
[»] chr1 (18 HSPs)
chr1 (5-253)||(35813342-35813590)
chr1 (5-253)||(9087739-9087987)
chr1 (5-253)||(32516860-32517108)
chr1 (5-253)||(45881274-45881522)
chr1 (5-109)||(9088352-9088456)
chr1 (5-109)||(32517473-32517577)
chr1 (5-109)||(45880805-45880909)
chr1 (105-254)||(2315919-2316061)
chr1 (43-109)||(35813955-35814021)
chr1 (5-105)||(249732-249832)
chr1 (5-105)||(36180325-36180425)
chr1 (5-105)||(11625888-11625988)
chr1 (5-105)||(11625335-11625435)
chr1 (5-105)||(36179765-36179865)
chr1 (5-105)||(47708424-47708524)
chr1 (5-105)||(250278-250378)
chr1 (66-108)||(42308806-42308848)
chr1 (5-109)||(29112999-29113103)
[»] chr7 (9 HSPs)
chr7 (5-253)||(7331630-7331878)
chr7 (5-109)||(7331161-7331265)
chr7 (5-109)||(31724086-31724190)
chr7 (5-105)||(33255770-33255870)
chr7 (5-105)||(33256323-33256423)
chr7 (5-105)||(47942060-47942160)
chr7 (5-105)||(47942605-47942705)
chr7 (5-105)||(47948035-47948135)
chr7 (36-108)||(16959513-16959585)
[»] scaffold0181 (2 HSPs)
scaffold0181 (5-253)||(17828-18076)
scaffold0181 (6-109)||(17360-17463)
[»] chr4 (14 HSPs)
chr4 (5-253)||(29379772-29380020)
chr4 (5-253)||(2519606-2519853)
chr4 (5-109)||(2520218-2520322)
chr4 (5-109)||(29380385-29380489)
chr4 (5-105)||(4206256-4206356)
chr4 (5-105)||(39232153-39232253)
chr4 (5-105)||(51539871-51539971)
chr4 (5-105)||(49603467-49603567)
chr4 (5-105)||(49604012-49604111)
chr4 (5-105)||(51540424-51540524)
chr4 (27-109)||(42020884-42020966)
chr4 (5-105)||(4206802-4206902)
chr4 (5-105)||(39232705-39232805)
chr4 (31-79)||(42020478-42020526)
[»] chr6 (10 HSPs)
chr6 (5-253)||(26275946-26276194)
chr6 (5-109)||(26275478-26275581)
chr6 (5-105)||(33775618-33775718)
chr6 (5-105)||(305562-305662)
chr6 (5-105)||(644695-644795)
chr6 (5-105)||(33776163-33776263)
chr6 (5-105)||(644150-644250)
chr6 (43-105)||(305047-305109)
chr6 (5-105)||(19803428-19803528)
chr6 (45-81)||(23949228-23949264)
[»] scaffold0178 (1 HSPs)
scaffold0178 (25-109)||(5034-5118)
[»] chr3 (12 HSPs)
chr3 (30-109)||(6588642-6588721)
chr3 (5-105)||(11503727-11503827)
chr3 (5-105)||(48222920-48223020)
chr3 (5-105)||(53302998-53303098)
chr3 (5-105)||(47862378-47862478)
chr3 (5-105)||(47861825-47861925)
chr3 (5-105)||(48222374-48222474)
chr3 (5-93)||(53303563-53303651)
chr3 (5-105)||(1194146-1194246)
chr3 (5-105)||(11504279-11504379)
chr3 (27-109)||(11195718-11195800)
chr3 (52-109)||(6589205-6589262)


Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 39774332 - 39774084
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39774332 caaaaataacctttatacgacttccggtagataaataccgatagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 39774233  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39774232 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 39774133  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39774132 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 39774084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 5157306 - 5157532
Alignment:
Q  27 tccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaactacatgtatgaaatta 126  Q
    |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  5157306 tccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacattttcaactacatgtatgaaatta 5157405  T
Q  127 tcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttcaatatggatggtcattggtcaa 226  Q
    |||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5157406 tcagatggtttatcggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaatatggatggtcattggtcaa 5157505  T
Q  227 tcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||    
T  5157506 tcttttattgatactaggaatgagagc 5157532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 39773614 - 39773719
Alignment:
Q  4 tcaaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacat 103  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  39773614 tcaaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattctgcacctccggtatgtacataccgaaggcacat 39773713  T
Q  104 tttcaa 109  Q
    ||||||    
T  39773714 tttcaa 39773719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 5157990 - 5157886
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5157990 caaaaataacctttataagacatccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 5157891  T
Q  105 ttcaa 109  Q
    |||||    
T  5157890 ttcaa 5157886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 5156601 - 5156701
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  5156601 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 5156700  T
Q  105 t 105  Q
    |    
T  5156701 t 5156701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 5157246 - 5157146
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  5157246 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 5157147  T
Q  105 t 105  Q
    |    
T  5157146 t 5157146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 28824174 - 28824274
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  28824174 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 28824273  T
Q  105 t 105  Q
    |    
T  28824274 t 28824274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 28824819 - 28824719
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||| | |||||||||    
T  28824819 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacatactggaggcacatt 28824720  T
Q  105 t 105  Q
    |    
T  28824719 t 28824719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 38376256 - 38376356
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  38376256 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 38376355  T
Q  105 t 105  Q
    |    
T  38376356 t 38376356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 44446017 - 44446117
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  44446017 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 44446116  T
Q  105 t 105  Q
    |    
T  44446117 t 44446117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 44446661 - 44446562
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  44446661 caaaaataacctttataa-acatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 44446563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 29556209 - 29556121
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacatacc 93  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||    
T  29556209 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacatacc 29556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 29555557 - 29555657
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||  |||  || |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  29555557 caaaaataacctttataatacatccggtagttacatcccggatgtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 29555656  T
Q  105 t 105  Q
    |    
T  29555657 t 29555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 38376909 - 38376809
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||| |||||||  || |||||||| || ||| |||  || |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  38376909 caaaaataatctttataatacatccggtagttacataccggatgtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 38376810  T
Q  105 t 105  Q
    |    
T  38376809 t 38376809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 3341635 - 3341883
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3341635 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 3341734  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3341735 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 3341834  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3341835 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 3341883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 3358544 - 3358792
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3358544 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 3358643  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3358644 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 3358743  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3358744 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 3358792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 3342352 - 3342248
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3342352 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 3342253  T
Q  105 ttcaa 109  Q
    |||||    
T  3342252 ttcaa 3342248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 3359261 - 3359157
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3359261 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 3359162  T
Q  105 ttcaa 109  Q
    |||||    
T  3359161 ttcaa 3359157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 4275614 - 4275714
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  4275614 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 4275713  T
Q  105 t 105  Q
    |    
T  4275714 t 4275714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 4276266 - 4276166
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  4276266 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 4276167  T
Q  105 t 105  Q
    |    
T  4276166 t 4276166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 31230132 - 31230032
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  31230132 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 31230033  T
Q  105 t 105  Q
    |    
T  31230032 t 31230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 2600881 - 2600981
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  2600881 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 2600980  T
Q  105 t 105  Q
    |    
T  2600981 t 2600981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 2601534 - 2601434
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || || ||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  2601534 caaaaataacctttataatacatctggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 2601435  T
Q  105 t 105  Q
    |    
T  2601434 t 2601434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 31229479 - 31229579
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  31229479 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 31229578  T
Q  105 t 105  Q
    |    
T  31229579 t 31229579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 5233878 - 5233920
Alignment:
Q  66 cattttgcacctccggtatgtacataccgaaggcacattttca 108  Q
    |||||||||||| |||||||||||||||| ||||| |||||||    
T  5233878 cattttgcaccttcggtatgtacataccggaggcatattttca 5233920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 21647650 - 21647898
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21647650 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 21647749  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21647750 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 21647849  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21647850 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 21647898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 15321863 - 15322111
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15321863 caaaaataacctttatacgacttccggtagataaataccggtagttcgttttaatttttctcattttgcacctccggtatatacataccgaaggcacatt 15321962  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||| || |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  15321963 ttcaactacaggtgtgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgtcc 15322062  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15322063 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 15322111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 29982918 - 29982670
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  |  |||||||| || ||| ||||||| |||||||| ||||| ||||||  |||| |||||||||||||||| |||||||||    
T  29982918 caaaaataacctttataatatatccggtagttacataccggtagtgcattttaaattttcacattttaaaccttcggtatgtacataccggaggcacatt 29982819  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  29982818 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttccatatagtggaaaacgtgacaagatccttaactccgttc 29982719  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29982718 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 29982670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 37645172 - 37644924
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||| |  |  |||||||| || ||| ||||||| |||||||| ||||| ||||||  |||| |||||||||||||||| |||||||||    
T  37645172 caaaaataacctttagaatatatccggtagttacataccggtagtgcattttaaattttcacattttaaaccttcggtatgtacataccggaggcacatt 37645073  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  37645072 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttccatatagtggaaaacgtgacaagatccttaactccgttc 37644973  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37644972 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 37644924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 21648367 - 21648263
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21648367 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 21648268  T
Q  105 ttcaa 109  Q
    |||||    
T  21648267 ttcaa 21648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 29982201 - 29982305
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29982201 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 29982300  T
Q  105 ttcaa 109  Q
    |||||    
T  29982301 ttcaa 29982305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 37644455 - 37644559
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37644455 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 37644554  T
Q  105 ttcaa 109  Q
    |||||    
T  37644555 ttcaa 37644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 15322658 - 15322554
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15322658 caaaaatgacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 15322559  T
Q  105 ttcaa 109  Q
    |||||    
T  15322558 ttcaa 15322554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 1389101 - 1389001
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  1389101 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 1389002  T
Q  105 t 105  Q
    |    
T  1389001 t 1389001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 22424736 - 22424636
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  22424736 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 22424637  T
Q  105 t 105  Q
    |    
T  22424636 t 22424636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 22424083 - 22424183
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| |||||  ||||| ||||| |||||||||||||||| |||||||||    
T  22424083 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcatattttacaccttcggtatgtacataccggaggcacatt 22424182  T
Q  105 t 105  Q
    |    
T  22424183 t 22424183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 25217104 - 25217006
Alignment:
Q  7 aaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattt 105  Q
    |||||| ||||||||  || || ||||| |||||| |||| || ||||||||  |||| ||||||| |||| ||||||||||||||||  |||||||||    
T  25217104 aaaatatcctttataatacgtcaggtagttaaataccggtggtgcattttaaaatttcacattttgaaccttcggtatgtacataccgggggcacattt 25217006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 35813342 - 35813590
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35813342 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 35813441  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35813442 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 35813541  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35813542 aatatggatggtcattggtcaatcttttattgatactaagaatgagagc 35813590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 9087739 - 9087987
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9087739 caaaaataacctttttacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 9087838  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9087839 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 9087938  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9087939 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 9087987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 32516860 - 32517108
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32516860 caaaaataacctttatacgacttccagtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccaaaggcacatt 32516959  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32516960 ttcaactacatgtatgaaattatcagatggtttaccgaggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 32517059  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32517060 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 32517108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 45881522 - 45881274
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45881522 caaaaataacctttatacgacttccagtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 45881423  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45881422 ttcaactacatgtatgaaattatcagatggtttaccagggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 45881323  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45881322 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 45881274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 9088456 - 9088352
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9088456 caaaaataacctttatacgacttccggtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 9088357  T
Q  105 ttcaa 109  Q
    |||||    
T  9088356 ttcaa 9088352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 32517577 - 32517473
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32517577 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 32517478  T
Q  105 ttcaa 109  Q
    |||||    
T  32517477 ttcaa 32517473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 45880805 - 45880909
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45880805 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 45880904  T
Q  105 ttcaa 109  Q
    |||||    
T  45880905 ttcaa 45880909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 105 - 254
Target Start/End: Complemental strand, 2316061 - 2315919
Alignment:
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||| || ||| |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||  |||||||||| |||||||| |    
T  2316061 ttcaactacaggtgtgagattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgcaacaagatcctcaactccgtcc 2315962  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagca 254  Q
    ||||||||||       |||||||||||||||||||||||||||||||||    
T  2315961 aatatggatg-------gtcaatcttttattgatactaggaatgagagca 2315919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 35814021 - 35813955
Alignment:
Q  43 cggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35814021 cggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 35813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 249732 - 249832
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||||||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  249732 caaaaataacctttataatacatccggtagttacatatcggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 249831  T
Q  105 t 105  Q
    |    
T  249832 t 249832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 36180425 - 36180325
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  36180425 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 36180326  T
Q  105 t 105  Q
    |    
T  36180325 t 36180325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 11625988 - 11625888
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||| |||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  11625988 caaaaataatctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 11625889  T
Q  105 t 105  Q
    |    
T  11625888 t 11625888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 11625335 - 11625435
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||| ||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  11625335 caaaaataacatttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 11625434  T
Q  105 t 105  Q
    |    
T  11625435 t 11625435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 36179765 - 36179865
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| |||||  ||||| ||||| |||||||||||||||  |||||||||    
T  36179765 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcaaattttacaccttcggtatgtacataccagaggcacatt 36179864  T
Q  105 t 105  Q
    |    
T  36179865 t 36179865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 47708524 - 47708424
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || |||  |||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  47708524 caaaaataacctttataatacatccggtagttacatactggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 47708425  T
Q  105 t 105  Q
    |    
T  47708424 t 47708424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 250378 - 250278
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || |||  |||||| |||||||| ||||| |||||| ||||| || ||||||||||||| ||||| |||    
T  250378 caaaaataacctttataatacatccggtagttacatacaggtagtgcattttaaattttcacattttacaccttcgatatgtacataccggaggcatatt 250279  T
Q  105 t 105  Q
    |    
T  250278 t 250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 42308848 - 42308806
Alignment:
Q  66 cattttgcacctccggtatgtacataccgaaggcacattttca 108  Q
    |||||||||||| |||||||||||||||| ||||| |||||||    
T  42308848 cattttgcaccttcggtatgtacataccggaggcatattttca 42308806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 29113103 - 29112999
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||| || ||||||| | ||||| |||||||| ||| | ||||||| |||| |  | |||||||| || |||||| ||    
T  29113103 caaaaataacctttataatacatccgatatataaatacccgtagtgcattttaaatttacacattttgaaccttcaatgtgtacatatcggaggcacttt 29113004  T
Q  105 ttcaa 109  Q
    |||||    
T  29113003 ttcaa 29112999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 7331878 - 7331630
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7331878 caaaaataacctttatacgacttccagtagataaataccggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 7331779  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7331778 ttcaactacatgtatgaaattatcagatggtttaccagggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 7331679  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7331678 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 7331630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 7331161 - 7331265
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7331161 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 7331260  T
Q  105 ttcaa 109  Q
    |||||    
T  7331261 ttcaa 7331265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 31724190 - 31724086
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  31724190 caaaaataatctttataagacttccggtagataaataccggtagttcattttaacttttctcattttacccctccggtatgtacataccgaaggcacatt 31724091  T
Q  105 ttcaa 109  Q
    |||||    
T  31724090 ttcaa 31724086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 33255770 - 33255870
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  33255770 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 33255869  T
Q  105 t 105  Q
    |    
T  33255870 t 33255870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 33256423 - 33256323
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  33256423 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 33256324  T
Q  105 t 105  Q
    |    
T  33256323 t 33256323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 47942060 - 47942160
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| |||  || |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  47942060 caaaaataacctttataatacatccggtagttacataccggatgtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 47942159  T
Q  105 t 105  Q
    |    
T  47942160 t 47942160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 47942705 - 47942605
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  |  |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  47942705 caaaaataacctttataatatatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 47942606  T
Q  105 t 105  Q
    |    
T  47942605 t 47942605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 47948135 - 47948035
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  |  |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  47948135 caaaaataacctttataatatatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 47948036  T
Q  105 t 105  Q
    |    
T  47948035 t 47948035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 16959585 - 16959513
Alignment:
Q  36 taaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttca 108  Q
    |||||| |||||| |||||||| |||||| |||||||||||| |||| |||||||||||   |||||||||||    
T  16959585 taaataccggtagatcattttattttttcacattttgcaccttcggtctgtacataccggctgcacattttca 16959513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 18076 - 17828
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18076 caaaaataacctttatacgacttctggtagataaataccggtagttcattttaatttttctcattttgcaccttcggtatgtacataccgaaggcacatt 17977  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  17976 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataaatttgcatatagtggaaaacgtgacaagatccttaactccgttc 17877  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17876 aatatggatggtcattggtcgatcttttattgatactaggaatgagagc 17828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 17360 - 17463
Alignment:
Q  6 aaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattt 105  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17360 aaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacattt 17459  T
Q  106 tcaa 109  Q
    ||||    
T  17460 tcaa 17463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 29379772 - 29380020
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29379772 caaaaataacctttatacaacttctggtagataaataccggtcgttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 29379871  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  29379872 ttcaactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcacatagtggaaaacgtgacaagatccttaactccgttc 29379971  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29379972 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 29380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 2519606 - 2519853
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| ||||||  |||| |||||||||||||||| |||||||||    
T  2519606 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttaaaccttcggtatgtacataccggaggcacatt 2519705  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2519706 ttcaactacatgtatgaaattatcagatggtttaccggggttcaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 2519805  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2519806 aatatggatggtca-tggtcaatcttttattgatactaggaatgagagc 2519853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 2520322 - 2520218
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2520322 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 2520223  T
Q  105 ttcaa 109  Q
    |||||    
T  2520222 ttcaa 2520218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 29380489 - 29380385
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29380489 caaaaataacctttataagacttccggtagataaataccggtagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 29380390  T
Q  105 ttcaa 109  Q
    |||||    
T  29380389 ttcaa 29380385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 4206256 - 4206356
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  4206256 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 4206355  T
Q  105 t 105  Q
    |    
T  4206356 t 4206356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 39232153 - 39232253
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  39232153 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 39232252  T
Q  105 t 105  Q
    |    
T  39232253 t 39232253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 51539871 - 51539971
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  51539871 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 51539970  T
Q  105 t 105  Q
    |    
T  51539971 t 51539971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 49603467 - 49603567
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  49603467 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 49603566  T
Q  105 t 105  Q
    |    
T  49603567 t 49603567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 49604111 - 49604012
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  49604111 caaaaataacctttataa-acatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 49604013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 51540524 - 51540424
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  51540524 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 51540425  T
Q  105 t 105  Q
    |    
T  51540424 t 51540424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 42020966 - 42020884
Alignment:
Q  27 tccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 109  Q
    ||||||||||| | |  ||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  42020966 tccggtagatagacactggtagttcaatttaacttttcacattttgcacctctggtatgtacataccgaaggcacatattcaa 42020884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 4206902 - 4206802
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || |||  |||||| |||||||| ||||| |||||| ||||| |||||||||||||||| ||||| |||    
T  4206902 caaaaataacctttataatacatccggtagttacatacaggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcatatt 4206803  T
Q  105 t 105  Q
    |    
T  4206802 t 4206802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 39232805 - 39232705
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||| |||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  39232805 caaaaataatctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 39232706  T
Q  105 t 105  Q
    |    
T  39232705 t 39232705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 42020478 - 42020526
Alignment:
Q  31 gtagataaatatcggtagttcattttaatttttctcattttgcacctcc 79  Q
    ||||||||| | |||||||| |||||| |||||| ||||||||||||||    
T  42020478 gtagataaacaccggtagttaattttattttttcacattttgcacctcc 42020526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 2e-95; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 5 - 253
Target Start/End: Complemental strand, 26276194 - 26275946
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| ||||||  |||| |||||||||||||||| |||||||||    
T  26276194 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttaaaccttcggtatgtacataccggaggcacatt 26276095  T
Q  105 ttcaactacatgtatgaaattatcagattgtttaccggggtccaaattttctataggtttgcatatagtggaaaacgtgacaagatccttaactccgttc 204  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26276094 ttcaactacatgtatgaaattatcagatggtttaccagggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttc 26275995  T
Q  205 aatatggatggtcattggtcaatcttttattgatactaggaatgagagc 253  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26275994 aatatggatggtcattggttaatcttttattgatactaggaatgagagc 26275946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 26275478 - 26275581
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26275478 caaaaataacctttataagacttccggtagataaataccg-tagttcattttaacttttctcattttgcacctccggtatgtacataccgaaggcacatt 26275576  T
Q  105 ttcaa 109  Q
    |||||    
T  26275577 ttcaa 26275581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 33775618 - 33775718
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  33775618 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 33775717  T
Q  105 t 105  Q
    |    
T  33775718 t 33775718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 305662 - 305562
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  305662 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 305563  T
Q  105 t 105  Q
    |    
T  305562 t 305562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 644795 - 644695
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  644795 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 644696  T
Q  105 t 105  Q
    |    
T  644695 t 644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 33776263 - 33776163
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  33776263 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 33776164  T
Q  105 t 105  Q
    |    
T  33776163 t 33776163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 644150 - 644250
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || | |||||| || ||| || |||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  644150 caaaaataacctttataatacattcggtagttacataccgatagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 644249  T
Q  105 t 105  Q
    |    
T  644250 t 644250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 305047 - 305109
Alignment:
Q  43 cggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattt 105  Q
    ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| ||||||||||    
T  305047 cggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacattt 305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 19803428 - 19803528
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  ||  || |||| || ||| ||||||| |||||||| |||||  |||||  |||| |||||||||||||||| |||||||||    
T  19803428 caaaaataacctttataatacaccccgtagttacataccggtagtgcattttaaattttcatattttaaaccttcggtatgtacataccggaggcacatt 19803527  T
Q  105 t 105  Q
    |    
T  19803528 t 19803528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 23949228 - 23949264
Alignment:
Q  45 gtagttcattttaatttttctcattttgcacctccgg 81  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  23949228 gtagttcaatttaatttttcacattttgcacctccgg 23949264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 5118 - 5034
Alignment:
Q  25 cttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 109  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5118 cttccggtagataaacatcgatagttcattttaatttttcacattttgcacctccggtatgtacataccgaaggcacattttcaa 5034  T

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Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 6588642 - 6588721
Alignment:
Q  30 ggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 109  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||    
T  6588642 ggtagataaacaccggtagttcattttaatttttcacattttgcacctcgagtatgtacataccgaagacacattttcaa 6588721  T

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Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 11503727 - 11503827
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  11503727 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 11503826  T
Q  105 t 105  Q
    |    
T  11503827 t 11503827  T

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Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 48223020 - 48222920
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  48223020 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 48222921  T
Q  105 t 105  Q
    |    
T  48222920 t 48222920  T

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Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 53302998 - 53303098
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  53302998 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 53303097  T
Q  105 t 105  Q
    |    
T  53303098 t 53303098  T

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Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 47862478 - 47862378
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||||||    
T  47862478 caaaaataacctttataatacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacataccagaggcacatt 47862379  T
Q  105 t 105  Q
    |    
T  47862378 t 47862378  T

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Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 47861825 - 47861925
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||| |||  || |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  47861825 caaaaataacctttataatacatccggtagttacataccggatgtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 47861924  T
Q  105 t 105  Q
    |    
T  47861925 t 47861925  T

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Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 48222374 - 48222474
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || |||  |||||| |||||||| ||||| |||||| ||||| |||||||||||||||| ||||| |||    
T  48222374 caaaaataacctttataatacatccggtagttacatacaggtagtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcatatt 48222473  T
Q  105 t 105  Q
    |    
T  48222474 t 48222474  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 53303651 - 53303563
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacatacc 93  Q
    |||||||||||||||||  || |||||||| || ||| ||||||| |||||||| ||||| |||||| ||||| |||||||||||||||    
T  53303651 caaaaataacctttataacacatccggtagttacataccggtagtgcattttaaattttcacattttacaccttcggtatgtacatacc 53303563  T

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Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 1194146 - 1194246
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  ||  ||||||| || ||| ||||||| |||||||| |||||  |||||  |||| |||||||||||||||| |||||||||    
T  1194146 caaaaataacctttataatacacccggtagttacataccggtagtgcattttaaattttcatattttaaaccttcggtatgtacataccggaggcacatt 1194245  T
Q  105 t 105  Q
    |    
T  1194246 t 1194246  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 11504379 - 11504279
Alignment:
Q  5 caaaaataacctttatacgacttccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacatt 104  Q
    |||||||||||||||||  || |||||||| || ||  |||  || |||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  11504379 caaaaataacctttataatacatccggtagttacatcccggatgtgcattttaaattttcacattttacaccttcggtatgtacataccggaggcacatt 11504280  T
Q  105 t 105  Q
    |    
T  11504279 t 11504279  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 11195800 - 11195718
Alignment:
Q  27 tccggtagataaatatcggtagttcattttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 109  Q
    ||||||| ||| |||  ||||||||||||| ||||||| ||||||| |||| || ||||||||||||  ||||||||||||||    
T  11195800 tccggtatatagatactggtagttcatttttatttttcacattttgaaccttcgatatgtacataccagaggcacattttcaa 11195718  T

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Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 6589262 - 6589205
Alignment:
Q  52 attttaatttttctcattttgcacctccggtatgtacataccgaaggcacattttcaa 109  Q
    |||| ||||||||  |||||||||||||| ||||||||||| ||| ||||||||||||    
T  6589262 atttgaatttttcgtattttgcacctccgatatgtacatactgaaagcacattttcaa 6589205  T

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