View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12438_low_9 (Length: 264)

Name: NF12438_low_9
Description: NF12438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12438_low_9
NF12438_low_9
[»] chr7 (32 HSPs)
chr7 (11-224)||(21785086-21785301)
chr7 (11-146)||(21639468-21639603)
chr7 (11-68)||(21771802-21771859)
chr7 (109-201)||(21663820-21663912)
chr7 (108-200)||(21771705-21771797)
chr7 (13-146)||(21681400-21681534)
chr7 (15-68)||(21725737-21725790)
chr7 (203-264)||(21627771-21627832)
chr7 (203-264)||(21681271-21681332)
chr7 (203-264)||(21740696-21740757)
chr7 (70-146)||(21689180-21689256)
chr7 (224-264)||(21784706-21784746)
chr7 (74-146)||(21991524-21991596)
chr7 (108-200)||(21725641-21725732)
chr7 (91-146)||(21791512-21791567)
chr7 (73-146)||(21627899-21627972)
chr7 (203-264)||(21704323-21704383)
chr7 (220-264)||(21784591-21784635)
chr7 (70-146)||(21791790-21791866)
chr7 (221-264)||(21725596-21725639)
chr7 (221-264)||(21771660-21771703)
chr7 (226-264)||(21787911-21787949)
chr7 (92-146)||(21788002-21788056)
chr7 (109-146)||(21651859-21651896)
chr7 (109-146)||(21704425-21704462)
chr7 (216-264)||(21651757-21651805)
chr7 (74-142)||(21713980-21714048)
chr7 (12-64)||(21788089-21788141)
chr7 (71-134)||(21622830-21622893)
chr7 (231-264)||(21663723-21663756)
chr7 (236-264)||(21713850-21713878)
chr7 (109-145)||(21740895-21740931)
[»] scaffold0182 (3 HSPs)
scaffold0182 (15-68)||(34375-34428)
scaffold0182 (108-200)||(34279-34370)
scaffold0182 (221-264)||(34234-34277)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 21785301 - 21785086
Alignment:
Q  11 ggatattgatcttt--caaacttgatgaaaatacaaatcaaaatgcgtattatatatagaggggctcagtgttgcgcattaaattttcatgg-tcttgaa 107  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21785301 ggatattgatctttttcaaacttgatgaaaatacaaatcaaaatgcggattatatatagaggggctcagtgttgcgcattaaattttcatggatcttgaa 21785202  T
Q  108 actttacctaatgaacaagataagtaaatatgcttgcttnnnnnnnntcttacacctccactttaatcgagtttaatccctaatcttcactacttttgtc 207  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21785201 actttacctaatgaacaagataagtaaatatgcttgcttaaaaaaaatcttacacctccactttaatcgag-ttaatccctaatcttcaatacttttgtc 21785103  T
Q  208 cttagaaaaaactatat 224  Q
    |||||||||||||||||    
T  21785102 cttagaaaaaactatat 21785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 21639603 - 21639468
Alignment:
Q  11 ggatattgatctttcaaacttgatgaaaatacaaatcaaaatgcgtattatatatagaggggctcagtgttgcgcattaaattttcatggtcttgaaact 110  Q
    ||||||||||||||||||||| | ||||| | |||||||||||||||||| ||||||| ||||||||||| | || ||||||||||||| ||||||||||    
T  21639603 ggatattgatctttcaaacttaacgaaaacataaatcaaaatgcgtattacatatagatgggctcagtgtagtgctttaaattttcatgctcttgaaact 21639504  T
Q  111 ttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    ||||||||||||||||||||||||||||||||||||    
T  21639503 ttacctaatgaacaagataagtaaatatgcttgctt 21639468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 21771859 - 21771802
Alignment:
Q  11 ggatattgatctttcaaacttgatgaaaatacaaatcaaaatgcgtattatatataga 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21771859 ggatattgatctttcaaacttgatgaaaatacaaatcaaaatgcgtattatatataga 21771802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 21663912 - 21663820
Alignment:
Q  109 ctttacctaatgaacaagataagtaaatatgcttgcttnnnnnnnntcttacacctccactttaatcgagtttaatccctaatcttcactact 201  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||| ||||| ||| |||||||||||||||    
T  21663912 ctttacctaatgaacaagataagtaaatatgcttgcttaaaaaaaatcttacaccttcactttaatctagttttatcactaatcttcactact 21663820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 21771797 - 21771705
Alignment:
Q  108 actttacctaatgaacaagataagtaaatatgcttgcttnnnnnnnntcttacacctccactttaatcgagtttaatccctaatcttcactac 200  Q
    |||||||||||||||||||||||||||||||||||||||        | |||||||| |||||||||||||||| ||||| ||||||||||||    
T  21771797 actttacctaatgaacaagataagtaaatatgcttgcttaaaaaaattattacaccttcactttaatcgagttttatccccaatcttcactac 21771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 21681534 - 21681400
Alignment:
Q  13 atattgatctttcaaacttgatgaaaatacaaatcaaaatgcgta-ttatatatagaggggctcagtgttgcgcattaaattttcatggtcttgaaactt 111  Q
    ||||||||||||||||||| | |||| || |||||||||||  || |||||||| || |||||||| || | || |||  |||||||| |||  || |||    
T  21681534 atattgatctttcaaacttaacgaaattataaatcaaaatgtctagttatatattgatgggctcagggtagtgctttagtttttcatgctctcaaacctt 21681435  T
Q  112 tacctaatgaacaagataagtaaatatgcttgctt 146  Q
    |||||||| ||||||||||||||||||||||||||    
T  21681434 tacctaataaacaagataagtaaatatgcttgctt 21681400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 21725790 - 21725737
Alignment:
Q  15 attgatctttcaaacttgatgaaaatacaaatcaaaatgcgtattatatataga 68  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21725790 attgatctgtcaaacttgatgaaaatacaaatcaaaatgcgtattatatataga 21725737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 21627832 - 21627771
Alignment:
Q  203 ttgtccttagaaaaaactatataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  21627832 ttgtcctcagaacaaactatataatgtccatcactttactcaacggacaagaaaagtaaaat 21627771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 21681332 - 21681271
Alignment:
Q  203 ttgtccttagaaaaaactatataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  21681332 ttgtcctcagaacaaactatataatgtctatcactttactcaatggacaagaaaagtaaaat 21681271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 21740757 - 21740696
Alignment:
Q  203 ttgtccttagaaaaaactatataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||| | || |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21740757 ttgtcctcataacaaactatataatgtccatcactttactcaatggacaagaaaagtaaaat 21740696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 21689256 - 21689180
Alignment:
Q  70 gggctcagtgttgcgcattaaattttcatggtcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    ||||||||||| | || ||| ||||||||| |||  || ||||||||||||||||||||||||||||||||||||||    
T  21689256 gggctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 21689180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 21784746 - 21784706
Alignment:
Q  224 taatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21784746 taatgttcatcactttactcaatggacaagaaaagtaaaat 21784706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 21991596 - 21991524
Alignment:
Q  74 tcagtgttgcgcattaaattttcatggtcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    ||||||| | || ||| ||||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  21991596 tcagtgtagtgctttagattttcattctctcgaacctttacctaatgaacaagataagtaaatatgcttgctt 21991524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 21725732 - 21725641
Alignment:
Q  108 actttacctaatgaacaagataagtaaatatgcttgcttnnnnnnnntcttacacctccactttaatcgagtttaatccctaatcttcactac 200  Q
    ||||||||||||||||||||||||||||||||| |||||        | |||||||| |||||||||| ||||| ||||| ||||||||||||    
T  21725732 actttacctaatgaacaagataagtaaatatgcgtgctt-aaaaaaatattacaccttcactttaatctagttttatccccaatcttcactac 21725641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 21791567 - 21791512
Alignment:
Q  91 attttcatggtcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    ||||||||| |||  || ||||||||||||||||||||||||||||||||||||||    
T  21791567 attttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 21791512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 21627972 - 21627899
Alignment:
Q  73 ctcagtgttgcgcattaaattttcatggtcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    |||||||| | || ||| ||||||||| |||  || ||||||||||||| ||||||||||||||||||||||||    
T  21627972 ctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgctt 21627899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 21704383 - 21704323
Alignment:
Q  203 ttgtccttagaaaaaactatataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||| |||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  21704383 ttgtcctcagaacaaa-tatataatgtccatcactttactcaatgtacaagaaaagtaaaat 21704323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 21784635 - 21784591
Alignment:
Q  220 tatataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  21784635 tatataatgtccatcactttactcattggacaagaaaagtaaaat 21784591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 21791866 - 21791790
Alignment:
Q  70 gggctcagtgttgcgcattaaattttcatggtcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    ||||||||||| | || ||| ||||||||| | |  || ||||||||| ||||||||||||||||||||||||||||    
T  21791866 gggctcagtgtagtgctttagattttcatgctttcaaacctttacctactgaacaagataagtaaatatgcttgctt 21791790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 21725639 - 21725596
Alignment:
Q  221 atataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  21725639 atataatgtccatcactttactcattggacaagaaaagtaaaat 21725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 21771703 - 21771660
Alignment:
Q  221 atataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  21771703 atataatgtccatcactttactcattggacaagaaaagtaaaat 21771660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 21787949 - 21787911
Alignment:
Q  226 atgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  21787949 atgtccatcactttactcaatggacaagaaaagtaaaat 21787911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 21788056 - 21788002
Alignment:
Q  92 ttttcatggtcttgaaactttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    |||||||| |||  || |||||||||||||||||||||| |||||||||||||||    
T  21788056 ttttcatgctctcaaacctttacctaatgaacaagataactaaatatgcttgctt 21788002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 21651896 - 21651859
Alignment:
Q  109 ctttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  21651896 ctttacctaattaacaagataagtaaatatgcttgctt 21651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 21704462 - 21704425
Alignment:
Q  109 ctttacctaatgaacaagataagtaaatatgcttgctt 146  Q
    |||||||||||||||||||||| |||||||||||||||    
T  21704462 ctttacctaatgaacaagataactaaatatgcttgctt 21704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 21651805 - 21651757
Alignment:
Q  216 aaactatataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||||||    
T  21651805 aaactatataatgtctaccactttactcaatggacaagaaatgtaaaat 21651757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 21714048 - 21713980
Alignment:
Q  74 tcagtgttgcgcattaaattttcatggtcttgaaactttacctaatgaacaagataagtaaatatgctt 142  Q
    ||||||| | || ||||||||||||| |||  || |||||||||||||||||| ||||||||| |||||    
T  21714048 tcagtgtagtgctttaaattttcatgctctcaaacctttacctaatgaacaagttaagtaaatctgctt 21713980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 21788141 - 21788089
Alignment:
Q  12 gatattgatctttcaaacttgatgaaaatacaaatcaaaatgcgtattatata 64  Q
    |||||||||||||||||||| | ||||||  ||||||||||| ||||||||||    
T  21788141 gatattgatctttcaaacttaacgaaaatgtaaatcaaaatgtgtattatata 21788089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 21622893 - 21622830
Alignment:
Q  71 ggctcagtgttgcgcattaaattttcatggtcttgaaactttacctaatgaacaagataagtaa 134  Q
    |||||||||| | || ||| ||||||||| |||  || ||||||||||||||||||||||||||    
T  21622893 ggctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaa 21622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 21663756 - 21663723
Alignment:
Q  231 catcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||||| ||||||||||||||||||||||||    
T  21663756 catcactttgctcaatggacaagaaaagtaaaat 21663723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 21713878 - 21713850
Alignment:
Q  236 ctttactcaatggacaagaaaagtaaaat 264  Q
    |||||||||||||||||||||||||||||    
T  21713878 ctttactcaatggacaagaaaagtaaaat 21713850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 21740931 - 21740895
Alignment:
Q  109 ctttacctaatgaacaagataagtaaatatgcttgct 145  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  21740931 ctttacctattgaagaagataagtaaatatgcttgct 21740895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 34428 - 34375
Alignment:
Q  15 attgatctttcaaacttgatgaaaatacaaatcaaaatgcgtattatatataga 68  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34428 attgatctgtcaaacttgatgaaaatacaaatcaaaatgcgtattatatataga 34375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 34370 - 34279
Alignment:
Q  108 actttacctaatgaacaagataagtaaatatgcttgcttnnnnnnnntcttacacctccactttaatcgagtttaatccctaatcttcactac 200  Q
    ||||||||||||||||||||||||||||||||| |||||        | |||||||| |||||||||| ||||| ||||| ||||||||||||    
T  34370 actttacctaatgaacaagataagtaaatatgcgtgctt-aaaaaaatattacaccttcactttaatctagttttatccccaatcttcactac 34279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 34277 - 34234
Alignment:
Q  221 atataatgttcatcactttactcaatggacaagaaaagtaaaat 264  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  34277 atataatgtccatcactttactcattggacaagaaaagtaaaat 34234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University