View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1243_high_77 (Length: 204)
Name: NF1243_high_77
Description: NF1243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1243_high_77 |
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Alignment Details
Target: chr3 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 8528190 - 8528271
Alignment:
| Q |
80 |
attatcaacacgtttgctgttgtcaatttatgcagtgtgcgcattcatagatgcactgtaatttcctatgaatcttcatctc |
161 |
Q |
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| T |
8528190 |
attatcaacatgttttctggtgtcgatttatgcagtgtgcggattcatagatgcactgtaatttcctatgaatcttcatctc |
8528271 |
T |
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