View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1243_low_105 (Length: 256)
Name: NF1243_low_105
Description: NF1243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1243_low_105 |
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Alignment Details
Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 30319669 - 30319782
Alignment:
| Q |
34 |
aggcaccattggaaatgacccatttgcttcctaatcatnnnnnnncaatctttttcaatttttaacactacccac-nnnnnnnntcagctagatccatga |
132 |
Q |
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| T |
30319669 |
aggcaccattggaaatgacccatttgcttcctaatcataaaaaaacaatccttttcaatttttaacactacccacaaaaaaaaatcagctagatccatga |
30319768 |
T |
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| Q |
133 |
attaaattcaaaag |
146 |
Q |
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|||||||||||||| |
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| T |
30319769 |
attaaattcaaaag |
30319782 |
T |
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