View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1243_low_135 (Length: 208)
Name: NF1243_low_135
Description: NF1243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1243_low_135 |
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Alignment Details
Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18352832 - 18352951
Alignment:
| Q |
1 |
aattatggtggttagaaagaactaagaacattttgttcatactattttggaaaataaaccttttgtatatttgtgcatgtgtaatcttacgagtaatgcc |
100 |
Q |
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| T |
18352832 |
aattatggtggttagaaagaactatgaacattttgttcatactattttggaaaataaaccttttgtatatttgtgcatgtgtaatcttacgagtaatgcc |
18352931 |
T |
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| Q |
101 |
agctgataacactcatttta |
120 |
Q |
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| T |
18352932 |
agttaatgacactcatttta |
18352951 |
T |
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