View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1243_low_50 (Length: 353)

Name: NF1243_low_50
Description: NF1243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1243_low_50
NF1243_low_50
[»] chr5 (40 HSPs)
chr5 (46-324)||(6234739-6235017)
chr5 (82-170)||(3198328-3198417)
chr5 (80-170)||(25460759-25460852)
chr5 (126-169)||(39610360-39610403)
chr5 (121-175)||(36124395-36124449)
chr5 (128-169)||(22394034-22394075)
chr5 (128-173)||(26409248-26409293)
chr5 (70-170)||(39799998-39800099)
chr5 (126-170)||(25604019-25604063)
chr5 (129-169)||(30488924-30488964)
chr5 (129-169)||(40730217-40730257)
chr5 (85-167)||(12473986-12474069)
chr5 (126-169)||(13796329-13796372)
chr5 (126-169)||(18589886-18589929)
chr5 (110-169)||(24485698-24485757)
chr5 (126-169)||(27721694-27721737)
chr5 (126-169)||(37932329-37932372)
chr5 (126-169)||(40715968-40716011)
chr5 (123-169)||(8410461-8410507)
chr5 (81-170)||(15241397-15241487)
chr5 (87-133)||(21261739-21261785)
chr5 (126-168)||(31602844-31602886)
chr5 (128-170)||(33584082-33584124)
chr5 (81-170)||(35112941-35113031)
chr5 (126-160)||(35412965-35412999)
chr5 (82-170)||(4067983-4068072)
chr5 (117-170)||(11188698-11188751)
chr5 (128-169)||(26034629-26034670)
chr5 (122-170)||(36422495-36422544)
chr5 (126-170)||(1669599-1669643)
chr5 (58-133)||(3740992-3741068)
chr5 (128-168)||(6017407-6017447)
chr5 (129-169)||(10199018-10199058)
chr5 (129-169)||(15725336-15725376)
chr5 (69-140)||(16745112-16745184)
chr5 (128-168)||(18431021-18431061)
chr5 (80-140)||(18890358-18890418)
chr5 (129-169)||(22585651-22585691)
chr5 (129-169)||(22619873-22619913)
chr5 (117-169)||(36321504-36321556)
[»] chr6 (36 HSPs)
chr6 (82-175)||(19374820-19374914)
chr6 (68-142)||(1368153-1368228)
chr6 (126-169)||(12904336-12904379)
chr6 (126-169)||(13496115-13496158)
chr6 (100-170)||(33930493-33930564)
chr6 (126-169)||(33938698-33938741)
chr6 (58-142)||(3709888-3709973)
chr6 (82-170)||(15305084-15305173)
chr6 (94-170)||(20568277-20568354)
chr6 (82-137)||(32788834-32788890)
chr6 (126-169)||(9111046-9111089)
chr6 (126-169)||(9392687-9392730)
chr6 (126-169)||(12333587-12333630)
chr6 (126-169)||(18256882-18256925)
chr6 (126-169)||(20744137-20744180)
chr6 (126-169)||(24269882-24269925)
chr6 (126-169)||(28951398-28951441)
chr6 (126-169)||(29335594-29335637)
chr6 (126-169)||(32053787-32053830)
chr6 (126-168)||(12700440-12700482)
chr6 (69-118)||(361217-361266)
chr6 (126-171)||(4450259-4450304)
chr6 (128-169)||(12204368-12204409)
chr6 (59-170)||(18904265-18904378)
chr6 (128-169)||(20720802-20720843)
chr6 (128-169)||(29069482-29069523)
chr6 (129-165)||(2445302-2445338)
chr6 (80-140)||(4326246-4326306)
chr6 (126-170)||(5338274-5338318)
chr6 (81-176)||(7545324-7545420)
chr6 (126-170)||(10118915-10118959)
chr6 (81-176)||(10517194-10517290)
chr6 (129-169)||(12336348-12336388)
chr6 (121-173)||(23610339-23610391)
chr6 (128-168)||(24623338-24623378)
chr6 (126-162)||(26587398-26587434)
[»] chr4 (46 HSPs)
chr4 (126-168)||(19479496-19479538)
chr4 (69-133)||(54215800-54215864)
chr4 (126-168)||(3936627-3936669)
chr4 (110-168)||(38297942-38298000)
chr4 (126-167)||(20403187-20403228)
chr4 (129-174)||(34931442-34931487)
chr4 (83-174)||(542795-542887)
chr4 (101-169)||(21729141-21729209)
chr4 (87-170)||(37935862-37935946)
chr4 (77-140)||(39311697-39311761)
chr4 (69-140)||(41137887-41137959)
chr4 (79-170)||(43539813-43539905)
chr4 (126-169)||(2186352-2186395)
chr4 (126-169)||(12698596-12698639)
chr4 (92-170)||(24680076-24680155)
chr4 (126-169)||(35287526-35287569)
chr4 (126-169)||(36203235-36203278)
chr4 (126-169)||(37193248-37193291)
chr4 (122-169)||(37463521-37463568)
chr4 (126-169)||(39171389-39171432)
chr4 (126-169)||(40070987-40071030)
chr4 (126-169)||(43374291-43374334)
chr4 (126-169)||(52270049-52270092)
chr4 (81-175)||(52757257-52757352)
chr4 (69-170)||(624481-624583)
chr4 (126-168)||(16743303-16743345)
chr4 (126-168)||(19854565-19854607)
chr4 (126-168)||(20383488-20383530)
chr4 (58-170)||(30305799-30305913)
chr4 (128-169)||(6459945-6459986)
chr4 (126-167)||(11949782-11949823)
chr4 (121-170)||(32293109-32293158)
chr4 (128-169)||(32923251-32923292)
chr4 (70-174)||(34353776-34353881)
chr4 (79-168)||(35851680-35851768)
chr4 (128-169)||(36569172-36569213)
chr4 (87-175)||(48569161-48569250)
chr4 (128-169)||(53530008-53530049)
chr4 (82-170)||(55055917-55056006)
chr4 (129-169)||(9913898-9913938)
chr4 (129-169)||(11949685-11949725)
chr4 (126-178)||(12439654-12439706)
chr4 (126-162)||(22040656-22040692)
chr4 (129-169)||(32430145-32430185)
chr4 (122-170)||(33933760-33933808)
chr4 (126-162)||(48251927-48251963)
[»] chr7 (43 HSPs)
chr7 (259-324)||(2975931-2975996)
chr7 (69-140)||(12428221-12428294)
chr7 (82-170)||(40518869-40518958)
chr7 (126-169)||(5458090-5458133)
chr7 (82-169)||(7876001-7876088)
chr7 (126-169)||(35142168-35142211)
chr7 (128-169)||(48069858-48069899)
chr7 (117-169)||(9522911-9522963)
chr7 (128-168)||(43539125-43539165)
chr7 (101-168)||(3533002-3533069)
chr7 (126-169)||(7670433-7670476)
chr7 (126-169)||(10244726-10244769)
chr7 (126-169)||(13955479-13955522)
chr7 (70-140)||(18503448-18503519)
chr7 (126-173)||(30033809-30033856)
chr7 (126-169)||(39801705-39801748)
chr7 (126-169)||(39926557-39926600)
chr7 (126-169)||(40752858-40752901)
chr7 (126-169)||(46207759-46207802)
chr7 (126-169)||(47589572-47589615)
chr7 (126-168)||(6384851-6384893)
chr7 (82-163)||(7836916-7836998)
chr7 (81-174)||(24188467-24188561)
chr7 (70-140)||(42798285-42798355)
chr7 (82-171)||(45284799-45284889)
chr7 (128-169)||(1051791-1051832)
chr7 (126-167)||(6768726-6768767)
chr7 (128-169)||(21597679-21597720)
chr7 (128-169)||(22327677-22327718)
chr7 (126-167)||(24559495-24559536)
chr7 (82-170)||(41331059-41331148)
chr7 (82-170)||(41465835-41465924)
chr7 (110-170)||(45411633-45411694)
chr7 (58-142)||(46758271-46758356)
chr7 (129-173)||(2391002-2391046)
chr7 (129-169)||(5526724-5526764)
chr7 (81-140)||(10690878-10690938)
chr7 (117-169)||(22690046-22690098)
chr7 (129-173)||(25251505-25251549)
chr7 (126-162)||(37307893-37307929)
chr7 (126-170)||(39280837-39280881)
chr7 (126-170)||(48527188-48527232)
chr7 (129-169)||(48980486-48980526)
[»] chr3 (43 HSPs)
chr3 (79-169)||(49750383-49750474)
chr3 (58-170)||(25883944-25884058)
chr3 (126-169)||(22722401-22722444)
chr3 (126-169)||(43490436-43490479)
chr3 (110-169)||(20370283-20370343)
chr3 (126-170)||(47099054-47099098)
chr3 (126-169)||(5941313-5941356)
chr3 (126-169)||(7868721-7868764)
chr3 (126-169)||(8942016-8942059)
chr3 (126-169)||(10498714-10498757)
chr3 (126-169)||(21331436-21331479)
chr3 (76-119)||(41215066-41215109)
chr3 (82-169)||(44764724-44764810)
chr3 (126-169)||(52453276-52453319)
chr3 (92-173)||(4227734-4227816)
chr3 (123-169)||(11508499-11508545)
chr3 (126-168)||(13800667-13800709)
chr3 (127-169)||(14894711-14894753)
chr3 (128-166)||(20537884-20537922)
chr3 (79-173)||(32023413-32023507)
chr3 (126-168)||(53996299-53996341)
chr3 (80-144)||(6062794-6062859)
chr3 (126-171)||(8113581-8113626)
chr3 (126-175)||(12976621-12976670)
chr3 (101-169)||(23653215-23653284)
chr3 (81-149)||(26880199-26880268)
chr3 (126-167)||(29631187-29631228)
chr3 (129-169)||(2496554-2496594)
chr3 (129-169)||(7938723-7938763)
chr3 (117-169)||(20612287-20612339)
chr3 (110-165)||(21549041-21549097)
chr3 (126-170)||(22486681-22486725)
chr3 (87-170)||(22501916-22502000)
chr3 (126-166)||(24428492-24428532)
chr3 (110-173)||(30200821-30200885)
chr3 (126-170)||(33745097-33745141)
chr3 (59-142)||(36472388-36472472)
chr3 (92-167)||(36625161-36625237)
chr3 (87-170)||(39966059-39966143)
chr3 (128-168)||(42269298-42269338)
chr3 (58-133)||(42920603-42920679)
chr3 (126-170)||(51882219-51882263)
chr3 (126-170)||(53681896-53681940)
[»] chr2 (54 HSPs)
chr2 (58-140)||(15939320-15939403)
chr2 (126-169)||(40546315-40546358)
chr2 (128-168)||(15637598-15637638)
chr2 (126-169)||(19967417-19967460)
chr2 (126-169)||(24305324-24305367)
chr2 (126-169)||(33063985-33064028)
chr2 (128-169)||(3196559-3196600)
chr2 (128-168)||(4238759-4238799)
chr2 (117-169)||(9383219-9383271)
chr2 (126-170)||(22520215-22520259)
chr2 (87-170)||(41566763-41566847)
chr2 (126-169)||(1861828-1861871)
chr2 (126-169)||(7201506-7201549)
chr2 (59-133)||(7717562-7717637)
chr2 (126-169)||(9519733-9519776)
chr2 (126-169)||(10195681-10195724)
chr2 (68-119)||(18254642-18254693)
chr2 (126-165)||(19159944-19159983)
chr2 (126-173)||(24593371-24593418)
chr2 (126-169)||(25186261-25186304)
chr2 (126-169)||(27244656-27244699)
chr2 (126-169)||(29979943-29979986)
chr2 (108-170)||(35727435-35727498)
chr2 (121-168)||(37119272-37119319)
chr2 (126-169)||(39068727-39068770)
chr2 (79-145)||(39635326-39635393)
chr2 (126-165)||(41668658-41668697)
chr2 (79-144)||(7000960-7001026)
chr2 (128-170)||(12893265-12893307)
chr2 (126-168)||(29734691-29734733)
chr2 (68-169)||(36748889-36748990)
chr2 (126-168)||(38443537-38443579)
chr2 (126-168)||(40853837-40853879)
chr2 (128-169)||(10332296-10332337)
chr2 (126-167)||(17280967-17281008)
chr2 (128-169)||(17736792-17736833)
chr2 (121-170)||(23405197-23405246)
chr2 (128-169)||(28202296-28202337)
chr2 (126-167)||(30956430-30956471)
chr2 (126-166)||(6228636-6228676)
chr2 (129-169)||(7262805-7262845)
chr2 (129-169)||(9517031-9517071)
chr2 (117-165)||(9547419-9547467)
chr2 (126-170)||(18231492-18231536)
chr2 (126-170)||(19179069-19179113)
chr2 (126-170)||(20200704-20200747)
chr2 (69-176)||(22653611-22653719)
chr2 (82-173)||(23919457-23919549)
chr2 (126-170)||(24393243-24393287)
chr2 (132-168)||(33117430-33117466)
chr2 (81-133)||(33563189-33563241)
chr2 (79-146)||(34463641-34463709)
chr2 (126-170)||(39761436-39761480)
chr2 (122-170)||(44658331-44658379)
[»] chr1 (53 HSPs)
chr1 (126-169)||(27449464-27449507)
chr1 (82-174)||(52426893-52426986)
chr1 (126-169)||(1794595-1794638)
chr1 (126-169)||(48681952-48681995)
chr1 (70-145)||(52431850-52431925)
chr1 (126-168)||(3393587-3393629)
chr1 (79-173)||(33229654-33229748)
chr1 (70-170)||(4865790-4865891)
chr1 (128-169)||(23045190-23045231)
chr1 (130-175)||(26763566-26763611)
chr1 (94-170)||(35111647-35111724)
chr1 (81-177)||(35605602-35605699)
chr1 (126-170)||(45140025-45140069)
chr1 (129-169)||(51127912-51127952)
chr1 (67-169)||(2997622-2997725)
chr1 (69-140)||(12404387-12404458)
chr1 (126-169)||(16967213-16967256)
chr1 (94-133)||(26349999-26350038)
chr1 (126-169)||(26755615-26755658)
chr1 (126-169)||(42045391-42045434)
chr1 (68-142)||(42735910-42735985)
chr1 (126-169)||(44641526-44641569)
chr1 (123-173)||(5291104-5291154)
chr1 (126-168)||(8253739-8253781)
chr1 (126-168)||(12213993-12214035)
chr1 (126-168)||(15382838-15382880)
chr1 (126-168)||(28832190-28832232)
chr1 (128-173)||(10292931-10292976)
chr1 (87-171)||(11215001-11215086)
chr1 (128-169)||(23915531-23915572)
chr1 (128-169)||(26834519-26834560)
chr1 (129-170)||(38214010-38214051)
chr1 (82-170)||(47469053-47469142)
chr1 (129-166)||(50372383-50372420)
chr1 (126-174)||(1605390-1605438)
chr1 (129-169)||(3157739-3157779)
chr1 (81-176)||(7191027-7191123)
chr1 (129-169)||(7550895-7550935)
chr1 (126-170)||(8148384-8148428)
chr1 (82-173)||(11333662-11333754)
chr1 (82-173)||(11491683-11491775)
chr1 (126-170)||(14520942-14520986)
chr1 (126-170)||(17283949-17283993)
chr1 (82-169)||(18607789-18607877)
chr1 (110-169)||(21400025-21400085)
chr1 (122-170)||(24874139-24874187)
chr1 (129-169)||(27853354-27853394)
chr1 (128-176)||(34485869-34485917)
chr1 (129-169)||(35308184-35308224)
chr1 (126-170)||(38448885-38448929)
chr1 (129-169)||(41032930-41032970)
chr1 (82-173)||(43021602-43021694)
chr1 (129-169)||(51989323-51989363)
[»] scaffold0250 (1 HSPs)
scaffold0250 (82-171)||(15005-15095)
[»] chr8 (50 HSPs)
chr8 (58-170)||(13059133-13059246)
chr8 (129-169)||(18148824-18148864)
chr8 (126-169)||(27718913-27718956)
chr8 (126-169)||(37750018-37750061)
chr8 (128-170)||(42367727-42367769)
chr8 (87-170)||(16449126-16449210)
chr8 (80-175)||(39362261-39362357)
chr8 (126-169)||(5728537-5728580)
chr8 (68-170)||(14181308-14181411)
chr8 (94-144)||(15187378-15187429)
chr8 (82-169)||(22437771-22437858)
chr8 (127-170)||(32878659-32878702)
chr8 (126-169)||(39433409-39433452)
chr8 (108-167)||(40392044-40392103)
chr8 (81-170)||(133416-133506)
chr8 (126-164)||(2060539-2060577)
chr8 (79-173)||(5962791-5962885)
chr8 (82-167)||(12770372-12770458)
chr8 (123-169)||(14975879-14975925)
chr8 (126-168)||(24195249-24195291)
chr8 (117-171)||(24296884-24296938)
chr8 (126-168)||(30427731-30427773)
chr8 (81-170)||(41272095-41272185)
chr8 (128-170)||(41625192-41625234)
chr8 (68-173)||(42023409-42023514)
chr8 (79-173)||(44615679-44615773)
chr8 (82-170)||(481012-481101)
chr8 (122-167)||(2908112-2908157)
chr8 (128-169)||(6038296-6038337)
chr8 (69-170)||(11483121-11483222)
chr8 (128-169)||(12886056-12886097)
chr8 (68-144)||(13105118-13105195)
chr8 (128-169)||(15188898-15188939)
chr8 (128-169)||(21557432-21557473)
chr8 (126-167)||(29652219-29652260)
chr8 (128-169)||(31085885-31085926)
chr8 (128-169)||(32115427-32115468)
chr8 (128-169)||(40316855-40316896)
chr8 (69-169)||(44553594-44553695)
chr8 (128-168)||(574384-574424)
chr8 (128-176)||(10320488-10320536)
chr8 (126-166)||(11052978-11053018)
chr8 (59-142)||(14583226-14583310)
chr8 (126-170)||(19778063-19778107)
chr8 (93-168)||(20872449-20872525)
chr8 (128-168)||(28436568-28436608)
chr8 (129-169)||(33445569-33445609)
chr8 (133-169)||(35103105-35103141)
chr8 (68-170)||(38730521-38730625)
chr8 (126-170)||(44019547-44019591)
[»] scaffold0006 (1 HSPs)
scaffold0006 (126-169)||(223696-223739)
[»] scaffold0118 (1 HSPs)
scaffold0118 (126-169)||(39997-40040)
[»] scaffold0072 (1 HSPs)
scaffold0072 (124-167)||(25696-25739)
[»] scaffold0350 (1 HSPs)
scaffold0350 (128-169)||(1247-1288)
[»] scaffold0009 (1 HSPs)
scaffold0009 (129-170)||(17723-17764)
[»] scaffold0098 (1 HSPs)
scaffold0098 (129-169)||(5424-5464)


Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 46 - 324
Target Start/End: Original strand, 6234739 - 6235017
Alignment:
Q  46 gtcaagtgacctcctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgtt 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6234739 gtcaagtgacctcctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaatccctgcatatattatgcattgtt 6234838  T
Q  146 catattaactgagctaagctcacggagatatcaggaagtatacctagttagtttgatataaacaaaattgtttgtgatactaagtaaattagtgtgtgaa 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6234839 catactaactgagctaagctcacggagatatcaggaagtatacctagttagtttgatataaacaaaattgtttgtgatactaagtaaattagtgtgtgaa 6234938  T
Q  246 tccgtgcatgcaccggataatatttaggtgttgtgatgcaattttagaggcgtgaagtagataataatatcgacaatag 324  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6234939 tccgtgcatgcaccggataatatataggtgttgtgatgcaattttagaggcgtgaagtagataataatatcgacaatag 6235017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 3198417 - 3198328
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||| | ||||  || ||||||||| |||||||||||||||||||||| ||| | ||  |||||||||||||||||||    
T  3198417 ttaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaagctcacgg 3198328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 25460759 - 25460852
Alignment:
Q  80 ttttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcat---attaactgagctaagctcacgg 170  Q
    ||||||||||| |||||||| ||||| || ||||||||||  |||||||||| ||||| || ||||| |   || |||||||||||||||||||    
T  25460759 ttttaaatgtggagaagtggggtgttcggggttcgaaccctgcccctgcataaattatacaatgttcctgccatcaactgagctaagctcacgg 25460852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 39610360 - 39610403
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  39610360 tgcatatattatgcattgtccatatcaactgagctaagctcacg 39610403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 36124449 - 36124395
Alignment:
Q  121 acccctgcatatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    ||||||||||||| |||||| | ||| ||| ||||||||||||||||||||||||    
T  36124449 acccctgcatataatatgcaatattcctatcaactgagctaagctcacggagata 36124395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 22394075 - 22394034
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  22394075 catatattatgcattgtccatatcaactgagctaagctcacg 22394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 26409293 - 26409248
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||    
T  26409293 catatattatgcattgtccataccaactgagctaagctcacggaga 26409248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 39799998 - 39800099
Alignment:
Q  70 agctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||| | |||||||||||| |||||||| ||||  || |||||| |||   |||||||||| |||||||||||| | ||  |||||||||||||||||    
T  39799998 agctcacacattttaaatgtggagaagtggggtgtcaggggttcgagcccctgcccctgcataaattatgcattgtccctaccaactgagctaagctcac 39800097  T
Q  169 gg 170  Q
    ||    
T  39800098 gg 39800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 25604019 - 25604063
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  25604019 tgcatatattatgcactgtccatatcaactgagctaagctcacgg 25604063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 30488964 - 30488924
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  30488964 atatattatgcattgttcatatcaactgaactaagctcacg 30488924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 40730217 - 40730257
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  40730217 atatattatgcattgttcatatcaacttagctaagctcacg 40730257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 12474069 - 12473986
Alignment:
Q  85 aatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    |||||| |||||||| ||||| |||||||||||  || |||||||||| ||||| || ||||| ||  ||||||||||||||||    
T  12474069 aatgtggagaagtggggtgttcggagttcgaacttcagcccctgcataaattatacaatgttcctaccaactgagctaagctca 12473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 13796372 - 13796329
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||||||  |||||| ||||||||||    
T  13796372 tgcatatattatgcattgttcatatcgactgagttaagctcacg 13796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 18589886 - 18589929
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  18589886 tgcatatattatgcattgttcataccaactgagttaagctcacg 18589929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 24485757 - 24485698
Alignment:
Q  110 gttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||| | || ||||||||||||||||||| ||||  |||| |||||||||||||    
T  24485757 gttcgaacccgaaccttgcatatattatgcattgtccataccaactaagctaagctcacg 24485698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 27721694 - 27721737
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||    
T  27721694 tgcatatattatgcattgttcctaccaactgagctaagctcacg 27721737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 37932372 - 37932329
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  37932372 tgcatatattatgcattgtccataccaactgagctaagctcacg 37932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 40715968 - 40716011
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  40715968 tgcatatattatgcattgtccatatcaattgagctaagctcacg 40716011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 8410461 - 8410507
Alignment:
Q  123 ccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| ||||| |||||||||||||| | |||||||||||||||||||    
T  8410461 cccttcatattttatgcattgttcacactaactgagctaagctcacg 8410507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 15241487 - 15241397
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||| |||| |||||||| ||||  |  ||||||||||  ||||||||||||| |||||| | ||| ||| |||||||||||||||||||    
T  15241487 tttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaagctcacgg 15241397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 21261739 - 21261785
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatata 133  Q
    |||| |||||||| |||| |||||||||||||| |||||||||||||    
T  21261739 tgtggagaagtggagtgtctggagttcgaacccgacccctgcatata 21261785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 31602844 - 31602886
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  31602844 tgcatatattatgcattgttcataccaactgagctaaggtcac 31602886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 33584124 - 33584082
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||| |||||||||||| ||||||||||| |||||||    
T  33584124 catatattatacattgttcatatcaactgagctaaactcacgg 33584082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 35112941 - 35113031
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||| |||| |||||| | ||||  ||||||||||||| |||||||||||||| |||||| | | | ||| |||||| ||||||||||||    
T  35112941 tttaattgtggagaagtagagtgtccggagttcgaaccccaacccctgcatataatatgcaatatccctatcaactgaactaagctcacgg 35113031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 35412999 - 35412965
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagct 160  Q
    ||||||||||||||||||| |||||||||||||||    
T  35412999 tgcatatattatgcattgtccatattaactgagct 35412965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 4068072 - 4067983
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  || ||||||||| |  |||||||||| | |||||||||| | ||  |||||||||||||||||||    
T  4068072 ttaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattgtccctaccaactgagctaagctcacgg 4067983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 11188698 - 11188751
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||||||||||| |||||| | ||| ||| |||||||||||||||||||    
T  11188698 cccagcccctgcatataatatgcaatattcctatcaactgagctaagctcacgg 11188751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 26034629 - 26034670
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  26034629 catatattatgcattgttcataccaactgagttaagctcacg 26034670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 36422544 - 36422495
Alignment:
Q  122 cccctgcatatattatgca-ttgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| |||||| ||  |||||||||||||||||||    
T  36422544 cccctgcatatattatgcatttgttcctaccaactgagctaagctcacgg 36422495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 1669599 - 1669643
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||    
T  1669599 tgcatatattatgcattgttcttaccaactgagctaagttcacgg 1669643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 3741068 - 3740992
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatata 133  Q
    |||||| || |||||||| | |||||||||||| |||||||| ||||  || ||||||| ||| |||||||||||||    
T  3741068 cctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatata 3740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 6017407 - 6017447
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  6017407 catatattatatattgttcctattaactgagctaagctcac 6017447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 10199058 - 10199018
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  10199058 atatattatgcattgtccataccaactgagctaagctcacg 10199018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 15725336 - 15725376
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  15725336 atatattatacattgttcatactaactgagttaagctcacg 15725376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 16745184 - 16745112
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgca 140  Q
    ||||||| ||| ||||| |||| |||||||| |||| |||||||||||| || |||||| |||||| ||||||    
T  16745184 gagctcacataatttaattgtggagaagtggggtgtctggagttcgaactccgacccctacatataatatgca 16745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 18431021 - 18431061
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||| |||||| ||||||||||||| |||||||||    
T  18431021 catatattatacattgtccatattaactgagttaagctcac 18431061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 18890418 - 18890358
Alignment:
Q  80 ttttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgca 140  Q
    ||||||||||| |||||||| ||||   | |||||||||| |||| |||||||||||||||    
T  18890418 ttttaaatgtggagaagtggggtgtcctgtgttcgaaccccacccatgcatatattatgca 18890358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 22585691 - 22585651
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||| ||||||| ||||| ||||    
T  22585691 atatattatgcattgttcatatcaactgagttaagcccacg 22585651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 22619913 - 22619873
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  22619913 atattttatgcattgttcataccaactgagctaagctcacg 22619873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 36321504 - 36321556
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| || ||||||||||||||||||| | ||  ||||||||||||||||||    
T  36321504 cccaaaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 36321556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 19374820 - 19374914
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    |||||| || |||||||| ||||| || |||||||||| |||||||||||||| |||||| | ||| || |||||||||||||||||||| ||||    
T  19374820 ttaaatttggagaagtggagtgttcggggttcgaaccccaacccctgcatataatatgcaatattcctactaactgagctaagctcacggggata 19374914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 1368153 - 1368228
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcatt 142  Q
    |||||||| | |||||||||||| |||||||| |||| ||||||| |||||| | |||||||||||||| ||||||    
T  1368153 ggagctcacacattttaaatgtggagaagtggggtgtctggagtttgaaccctagcccctgcatatattgtgcatt 1368228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 12904336 - 12904379
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||    
T  12904336 tgcatatattatgcattgttcatatcaactgaggtaagctcacg 12904379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 13496158 - 13496115
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||    
T  13496158 tgcatatattatgcattgttcatatcaactgagttaagctcacg 13496115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 33930564 - 33930493
Alignment:
Q  100 tgtgtttggagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||| |||||||||| || || ||||||||||||||||| ||| || ||||||||||||||||||||    
T  33930564 tgtggttggggttcgaaccctaaaccttgcatatattatgcatttttcctactaactgagctaagctcacgg 33930493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 33938698 - 33938741
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  33938698 tgcatatattatgcattgttcataccaactgagctaagctcacg 33938741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 3709973 - 3709888
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccc-tgcatatattatgcatt 142  Q
    |||||| || |||||||  | |||||||||||| |||||||| |||| ||| |||||||||| ||||| |||||||| ||||||||    
T  3709973 cctagtggctggagctctcacattttaaatgtggagaagtggggtgtctggggttcgaaccccaccccttgcatataatatgcatt 3709888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 15305084 - 15305173
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||| |||| ||| |||||||||||||||| |||||| |||||||| |||||||| ||||| ||  ||||||| ||| |||||||    
T  15305084 ttaattgtggagaaatggagtgtttggagttcgaaccccaacacctgcataaattatgcaatgttcctaccaactgagttaaactcacgg 15305173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 20568277 - 20568354
Alignment:
Q  94 aagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||| ||||| || ||||||||||  |||||||||||||||||||| ||| | ||  |||||||||||||||||||    
T  20568277 aagtggggtgttcggggttcgaaccccgacccctgcatatattatgcaatgtccttaccaactgagctaagctcacgg 20568354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 32788834 - 32788890
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattat 137  Q
    |||||||||||||||||| ||||  |||||||||| ||||||||||||||| |||||    
T  32788834 ttaaatgtgtagaagtggggtgtccggagttcgaaccccaacccctgcataaattat 32788890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 9111089 - 9111046
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  |||||| |||||||||||    
T  9111089 tgcatatattatgcattgttcataccaactgaactaagctcacg 9111046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 9392687 - 9392730
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||    
T  9392687 tgcatatattatgcatttttcataacaactgagctaagctcacg 9392730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 12333587 - 12333630
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||    
T  12333587 tgcatattttatgcattgtccatactaactgagctaagctcacg 12333630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 18256925 - 18256882
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  18256925 tgcatatattatgcattgtccttatcaactgagctaagctcacg 18256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 20744180 - 20744137
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  20744180 tgcatatattatgcattgtccataccaactgagctaagctcacg 20744137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 24269925 - 24269882
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||    
T  24269925 tgcatattttatgcattgtccatactaactgagctaagctcacg 24269882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 28951441 - 28951398
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  28951441 tgcatatattatgcattgttcataccaactgagttaagctcacg 28951398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 29335594 - 29335637
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||    
T  29335594 tgcatatattatgcattgtttatactaactgagttaagctcacg 29335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 32053830 - 32053787
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  32053830 tgcatatattatgcattgtccataccaactgagctaagctcacg 32053787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 12700440 - 12700482
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||||||  |||||| ||||||||||    
T  12700440 tgcatatattatgcattgttcataccaactgaactaagctcac 12700482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 361266 - 361217
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacc 118  Q
    ||||||| ||||||||||| || |||||||| |||| |||||||||||||    
T  361266 gagctcacatattttaaatatggagaagtggggtgtctggagttcgaacc 361217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 4450304 - 4450259
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgga 171  Q
    |||||||||||||||||||   ||| ||||||||||||||||||||    
T  4450304 tgcatatattatgcattgtctttatcaactgagctaagctcacgga 4450259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 12204409 - 12204368
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||| |||||||||| |||||||    
T  12204409 catatattatgcattgtccatatcaactgagctatgctcacg 12204368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 18904378 - 18904265
Alignment:
Q  59 ctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgca-ttgttcatattaactg 156  Q
    ||||| || |||||||| | |||||||||||| |||||||| ||||  || ||||||| ||| |||||||||||||  ||||| |||| | ||  |||||    
T  18904378 ctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataaaatgcatttgtccctaccaactg 18904279  T
Q  157 agctaagctcacgg 170  Q
    ||| ||||||||||    
T  18904278 agcaaagctcacgg 18904265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 20720802 - 20720843
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  20720802 catatattatgcattgtccataacaactgagctaagctcacg 20720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 29069523 - 29069482
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| | ||| ||||||||||||||||||    
T  29069523 catatattatgcattgtccctatcaactgagctaagctcacg 29069482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 2445338 - 2445302
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagct 165  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  2445338 atatattatgcattgttcatatcaactgagttaagct 2445302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 4326306 - 4326246
Alignment:
Q  80 ttttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgca 140  Q
    ||||||||||  | |||||| |||  ||| ||||||||||||||||| |||||||||||||    
T  4326306 ttttaaatgttgaaaagtggggtggctggggttcgaacccaacccctacatatattatgca 4326246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 5338318 - 5338274
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||| ||||||||||||| | ||||||| |||||||||||||||    
T  5338318 tgcatgtattatgcattgtacttattaaccgagctaagctcacgg 5338274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 7545420 - 7545324
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacggagatat 176  Q
    ||||| |||| |||||||| ||||| || ||||||||||   |||||||||||| |||||| | | | ||  ||||||||||||||||||| |||||    
T  7545420 tttaattgtggagaagtggggtgttcggggttcgaaccctggcccctgcatataatatgcaatatccctaccaactgagctaagctcacggggatat 7545324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 10118959 - 10118915
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||| ||||||| ||  |||||||||||||||||||    
T  10118959 tgcatatattatgtattgttcttaccaactgagctaagctcacgg 10118915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 10517290 - 10517194
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacggagatat 176  Q
    ||||| |||| |||||||| ||||  || ||||||||||  |||||||||||||  ||||| | | ||||  ||||||||||||||||||| |||||    
T  10517290 tttaattgtggagaagtggagtgtccggggttcgaaccccgacccctgcatataaaatgcaatatccataccaactgagctaagctcacggggatat 10517194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 12336348 - 12336388
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  12336348 atatattatgcattgtccatattaactgagttaaactcacg 12336388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 23610339 - 23610391
Alignment:
Q  121 acccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||||| |||||||| ||| | ||  ||||||||||||||||||||||    
T  23610339 acccctgcataaattatgcaatgtccctaccaactgagctaagctcacggaga 23610391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 24623338 - 24623378
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  24623338 catatattatgcattgtccatatcaactgagctaaactcac 24623378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 26587434 - 26587398
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaa 162  Q
    ||||||||||||||||||||| || ||||||||||||    
T  26587434 tgcatatattatgcattgttcttactaactgagctaa 26587398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 19479496 - 19479538
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19479496 tgcatatattatgcattgttcatattaactgagctaagctcac 19479538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 54215864 - 54215800
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatata 133  Q
    ||||||| |||||||||||||| |||||||| |||| ||| |||||||||| |||||| ||||||    
T  54215864 gagctcacatattttaaatgtggagaagtggggtgtctggggttcgaaccccacccctacatata 54215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 3936669 - 3936627
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  3936669 tgcatatattatgcattgttcataccaactgagctaagctcac 3936627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 38298000 - 38297942
Alignment:
Q  110 gttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||||  |||||||||||||||||||||| ||||| || |||| |||||||||    
T  38298000 gttcgaacccagaccctgcatatattatgcattgtccatatcaattgaggtaagctcac 38297942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 20403187 - 20403228
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  20403187 tgcatatattatgcattgttcctatcaactgagctaagctca 20403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 34931442 - 34931487
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacggagat 174  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||    
T  34931442 atatagtatgcattgttcatattaactgagctaacctcacgaagat 34931487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 542795 - 542887
Alignment:
Q  83 taaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacggagat 174  Q
    |||||||| |||||||| ||||  | ||||||||||| | |||||||||| | |||||| | | | ||| |||||||||||||||||||||||    
T  542795 taaatgtggagaagtggagtgtccgaagttcgaaccccagcccctgcatacaatatgcaatatccctatcaactgagctaagctcacggagat 542887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 21729209 - 21729141
Alignment:
Q  101 gtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | || | ||||||||||| | ||||| ||||||||||| ||| ||||||    
T  21729209 gtgtttggagttcgaaccccatccttacatatattatgtaatgttcctattaactgagttaaactcacg 21729141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 37935946 - 37935862
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| ||||||| ||||| ||||||||||| |||| |||||||||||| |||||| | | | ||  |||||||||||||||||||    
T  37935946 tgtggagaagtgttgtgtctggagttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 37935862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 39311761 - 39311697
Alignment:
Q  77 atattttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgca 140  Q
    |||||||||||||||||||||||   ||| ||||||  |||| ||||||||||||||||||||||    
T  39311761 atattttaaatgtgtagaagtggaaagttcggagtttaaacctcaacccctgcatatattatgca 39311697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 41137887 - 41137959
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgca 140  Q
    ||||||| | ||||||||| || |||||||| |||| ||  |||||||||| |||||||||||||||||||||    
T  41137887 gagctcaaacattttaaatatgaagaagtggggtgtctgtggttcgaaccccaacccctgcatatattatgca 41137959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 43539905 - 43539813
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||| |||||||| |||| | || |||||||| || ||||| ||||||||||| ||||| | ||  |||||| ||||||||||||    
T  43539905 attttaaatgtggagaagtggggtgtctagaattcgaacctcagcccctacatatattatgtattgtccctaccaactgaactaagctcacgg 43539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 2186352 - 2186395
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  2186352 tgcatatattatgcattgtccataccaactgagctaagctcacg 2186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 12698639 - 12698596
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| || || ||||||||||||||||||    
T  12698639 tgcatatattatgcattgtccaaatcaactgagctaagctcacg 12698596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 24680076 - 24680155
Alignment:
Q  92 agaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||| |||| ||||||||||||| || |||||||||||| |||||| | | | ||  |||||||||||||||||||    
T  24680076 agaagtggagtgtctggagttcgaacctcagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 24680155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 35287526 - 35287569
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||    
T  35287526 tgcatattttatgcattgttcataccaactgagctaagctcacg 35287569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 36203278 - 36203235
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  36203278 tgcatatattatgcattgtccttatcaactgagctaagctcacg 36203235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 37193291 - 37193248
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||| |||||| |||| |||||||||||||||||||    
T  37193291 tgcatatattatacattgtccatactaactgagctaagctcacg 37193248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 37463568 - 37463521
Alignment:
Q  122 cccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| ||||||||||||||||||||||  ||| ||||||||||||||    
T  37463568 ccccttcatatattatgcattgttcataccaaccgagctaagctcacg 37463521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 39171389 - 39171432
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  39171389 tgcatattttatgcattgtccatatcaactgagctaagctcacg 39171432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 40070987 - 40071030
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  40070987 tgcatatattatgcattgttcataccaactgagttaagctcacg 40071030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 43374291 - 43374334
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  43374291 tgcatattttatgcattgtccatatcaactgagctaagctcacg 43374334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 52270049 - 52270092
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  52270049 tgcatatattatgcattgtccataccaactgagctaagctcacg 52270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 52757257 - 52757352
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    ||||| |||| |||| ||| |||| || ||||||||||| |||||||||||||| |||||| | ||| |   ||||||||||||||||||| ||||    
T  52757257 tttaattgtggagaaatggggtgtctgaagttcgaaccccaacccctgcatataatatgcaatattcctgccaactgagctaagctcacggggata 52757352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 624583 - 624481
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||| | |||||||||||| |||||||| ||||  || ||||||| |||  |||||||||| |||||||| ||| | ||  ||||||| ||||||||    
T  624583 gagctcacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaactgagttaagctca 624484  T
Q  168 cgg 170  Q
    |||    
T  624483 cgg 624481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 16743303 - 16743345
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||| | ||||| |||||||||||||||||    
T  16743303 tgcatatattatgcattatccatatcaactgagctaagctcac 16743345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 19854607 - 19854565
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  19854607 tgcatatattatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 20383530 - 20383488
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  20383530 tgcatatattatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 30305913 - 30305799
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgca-ttgttcatattaact 155  Q
    |||||| || |||||||| | |||||||||||| |||||||  ||||  || ||||||| |||| ||||||||||||  ||||| |||| ||||  ||||    
T  30305913 cctagtggctggagctcacacattttaaatgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatataaaatgcatttgtccataccaact 30305814  T
Q  156 gagctaagctcacgg 170  Q
    |||| ||||||||||    
T  30305813 gagcaaagctcacgg 30305799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 6459945 - 6459986
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||    
T  6459945 catatattatgcattgtccatatcaactgagttaagctcacg 6459986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 11949782 - 11949823
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||| ||||  ||||||||||||||||    
T  11949782 tgcatatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 32293158 - 32293109
Alignment:
Q  121 acccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||| |||||||| ||| | ||| |||||||||||||||||||    
T  32293158 acccctgcataaattatgcaatgtccttatcaactgagctaagctcacgg 32293109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 32923251 - 32923292
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  32923251 catatattatgcattgttcataccaactgagttaagctcacg 32923292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 34353881 - 34353776
Alignment:
Q  70 agctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||| ||| ||||| |||| |||||||| ||||  || ||||||||||  ||| ||||||||| |||||| | | | ||  |||||||||||||||||    
T  34353881 agctcacataatttaattgtggagaagtggggtgtccggggttcgaaccctgacctctgcatataatatgcaatatccctaccaactgagctaagctcac 34353782  T
Q  169 ggagat 174  Q
    ||||||    
T  34353781 ggagat 34353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 35851680 - 35851768
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||||| ||||| || ||||| || |||| ||||| |||||| ||||||||||||| ||| | ||  ||||||| |||||||||    
T  35851680 attttaaatgtggagaag-ggagtgttaggggttctaaccctacccctacatatattatgcaatgtccctaccaactgagttaagctcac 35851768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 36569213 - 36569172
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||| |||||| ||| |||||||||||||||    
T  36569213 catatattatgcatttttcatactaattgagctaagctcacg 36569172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 48569161 - 48569250
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    |||| |||||||| |||| ||| |||||||||| | |||||||||||| |||||| | | | ||  ||||||||||||||||||| ||||    
T  48569161 tgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacggggata 48569250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 53530049 - 53530008
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  53530049 catatattatgcattgtttttattaactgagttaagctcacg 53530008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 55056006 - 55055917
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  || ||||||||| |  |||||||||| | |||||||||| | ||  |||||||||||||||||||    
T  55056006 ttaaatgtggagaagtggcgtgtccggggttcgaacctcggcccctgcataaaatatgcattgtccctaccaactgagctaagctcacgg 55055917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 9913938 - 9913898
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  9913938 atattttatgcattgttcataccaactgagctaagctcacg 9913898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 11949685 - 11949725
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||| ||||||| ||| ||||||||||||||||||    
T  11949685 atatattatgtattgttcttatcaactgagctaagctcacg 11949725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 12439706 - 12439654
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacggagatatca 178  Q
    ||||||||||||||||||| | ||| |||||||||||| ||| | ||||||||    
T  12439706 tgcatatattatgcattgtccttatcaactgagctaagttcatgaagatatca 12439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 22040692 - 22040656
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaa 162  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  22040692 tgcatatattatgcattgtccatatcaactgagctaa 22040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 32430145 - 32430185
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| |||||||||||||||| |||||||| ||||||||||    
T  32430145 atattttatgcattgttcatactaactgagttaagctcacg 32430185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 33933760 - 33933808
Alignment:
Q  122 cccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| ||| | ||  |||||||||||||||||||    
T  33933760 cccctgcatatattatgcaatgtccctaccaactgagctaagctcacgg 33933808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 48251927 - 48251963
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaa 162  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48251927 tgcatatattatacattgttcatatcaactgagctaa 48251963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 2975996 - 2975931
Alignment:
Q  259 cggataatatttaggtgttgtgatgcaattttagaggcgtgaagtagataataatatcgacaatag 324  Q
    |||||||||||| | ||| |||||||||||||||| | ||||||||||||||||||| ||||||||    
T  2975996 cggataatattttgctgtcgtgatgcaattttagatgtgtgaagtagataataatattgacaatag 2975931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 12428294 - 12428221
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgttt-ggagttcgaa-cccaacccctgcatatattatgca 140  Q
    ||||||||| |||||||||||| |||||| | |||||| |||||||||| ||||||||||||||||| ||||||    
T  12428294 gagctcatacattttaaatgtggagaagttgggtgtttgggagttcgaaccccaacccctgcatataatatgca 12428221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 40518869 - 40518958
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  |||||||||| |||||||||| ||||||||||||| ||| | ||  |||||||||||| ||||||    
T  40518869 ttaaatgtggagaagtggggtgtccggagttcgaatcccaacccctacatatattatgcaatgtccctaccaactgagctaagttcacgg 40518958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 5458090 - 5458133
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  5458090 tgcatatattatgcattgttcttatcaactgagctaagctcacg 5458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 7876088 - 7876001
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| |||| |||||||| |||| ||||||| |||||| | ||||||||| |||||||| ||| | ||  ||||||||||||||||||    
T  7876088 ttaattgtggagaagtggggtgtctggagtttgaacccgatccctgcataaattatgcaatgtccctaccaactgagctaagctcacg 7876001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 35142168 - 35142211
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  35142168 tgcatatattatgcattgtccatatcaactgagctaagctcacg 35142211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 48069858 - 48069899
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  48069858 catatattatgcattgttcatgtcaactgagctaagctcacg 48069899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 9522963 - 9522911
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| || ||||||||||||||||||||||||  |||||||||||| |||||    
T  9522963 cccaaaccttgcatatattatgcattgttcataccaactgagctaagttcacg 9522911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 43539125 - 43539165
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  43539125 catatattatgcattgttcctatcaactgagctaagctcac 43539165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 3533002 - 3533069
Alignment:
Q  101 gtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||| ||| |||||||||||  || ||||||||||||||||||| | || |||||||||||| |||||    
T  3533002 gtgtatggggttcgaacccataccttgcatatattatgcattgtccttactaactgagctaaactcac 3533069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 7670476 - 7670433
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||| |  ||||||||||||||||||    
T  7670476 tgcatatattatgcattgttcaaaccaactgagctaagctcacg 7670433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 10244769 - 10244726
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  10244769 tgcatatattatgcattgtccataccaactgagctaagctcacg 10244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 13955522 - 13955479
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||    
T  13955522 tgcatattttatgcattgttcataccaactgagctaagctcacg 13955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 18503448 - 18503519
Alignment:
Q  70 agctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgca 140  Q
    |||||| | |||||||||||| |||||||| |||| ||| ||||||||| || |||||||||||| ||||||    
T  18503448 agctcacacattttaaatgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgca 18503519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 30033856 - 30033809
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||| |||||||||||||||| ||  ||||||||||||||||||||||    
T  30033856 tgcaaatattatgcattgttcttaccaactgagctaagctcacggaga 30033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 39801748 - 39801705
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  39801748 tgcatatattatgcattgtccataccaactgagctaagctcacg 39801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 39926557 - 39926600
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  39926557 tgcatatattatgcattgtccttatcaactgagctaagctcacg 39926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 40752858 - 40752901
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||    
T  40752858 tgcatatattatgtattgtccatactaactgagctaagctcacg 40752901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 46207802 - 46207759
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||    
T  46207802 tgcatattttatgcattgttcataccaactgagctaagctcacg 46207759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 47589572 - 47589615
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||    
T  47589572 tgcatattttatgcattgttcataccaactgagctaagctcacg 47589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 6384893 - 6384851
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  6384893 tgcatatattatgcattgtccttattaactgagttaagctcac 6384851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 7836916 - 7836998
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaag 163  Q
    ||||||||| |||||||||||||| |||||||||| ||| | ||||||||| ||||| || ||| | ||| ||||||| ||||    
T  7836916 ttaaatgtggagaagtggtgtgttcggagttcgaaccccgatccctgcataaattatacaatgtccctatcaactgagttaag 7836998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 24188561 - 24188467
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacggagat 174  Q
    ||||| |||| |||||||| |||| ||| ||||||||||  ||||||||||||| |||||| | | | ||  |||||||||| ||||||||||||    
T  24188561 tttaattgtggagaagtggggtgtctggggttcgaaccccgacccctgcatataatatgcagtatccctaccaactgagctatgctcacggagat 24188467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 42798285 - 42798355
Alignment:
Q  70 agctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgca 140  Q
    |||||| | |||||||||||| |||||| | ||||| ||||||||||||| | ||| ||||||| ||||||    
T  42798285 agctcacacattttaaatgtggagaagtcgggtgttcggagttcgaaccccagccccgcatataatatgca 42798355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 45284799 - 45284889
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacgga 171  Q
    ||||||||  |||||||| ||||  || ||||||||||  ||||||||||| ||||| || ||| | ||| ||||||||||||||||||||    
T  45284799 ttaaatgttgagaagtggggtgtccggggttcgaaccccgacccctgcataaattattcaatgtccctatcaactgagctaagctcacgga 45284889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 1051791 - 1051832
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||| |||||||| ||| ||||||||||||||||||||    
T  1051791 catatattgtgcattgtccatgttaactgagctaagctcacg 1051832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 6768726 - 6768767
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||    
T  6768726 tgcatatattatgcattgttcttattaaccgagctaatctca 6768767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 21597720 - 21597679
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||    
T  21597720 catatattatgcattgtccatatcaactgagataagctcacg 21597679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 22327718 - 22327677
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||  ||||||||||||||||||    
T  22327718 catatattatgcattgttcttacgaactgagctaagctcacg 22327677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 24559495 - 24559536
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||||| || |||||||| ||||||||    
T  24559495 tgcatatattatgcattgttcctactaactgagttaagctca 24559536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 41331059 - 41331148
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  ||| |||||||||  ||||||||||| |||||||| ||| | |   |||||||||||||||||||    
T  41331059 ttaaatgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattatgcaatgtccctgccaactgagctaagctcacgg 41331148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 41465924 - 41465835
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  |||||||||||||  ||||||||||||| |||||| | | | ||  |||||||||||||| ||||    
T  41465924 ttaaatgtggagaagtggggtgtccggagttcgaaccctgacccctgcatataatatgcaatatccctaccaactgagctaagcttacgg 41465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 45411694 - 45411633
Alignment:
Q  110 gttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||| |||||||||| ||||| || ||||| ||  |||||||||||||||||||    
T  45411694 gttcgaacccaaacccctgcataaattatacaatgttcttaccaactgagctaagctcacgg 45411633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 46758356 - 46758271
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcatt 142  Q
    |||||| || |||||||| | |||||||||||| || ||||| ||||  |||||||||| ||| |||||||||||||  |||||||    
T  46758356 cctagtggctggagctcacacattttaaatgtggaggagtggggtgtccggagttcgaaccccgacccctgcatataaaatgcatt 46758271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 2391046 - 2391002
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||||||||||||| ||  |||||||||||| |||||||||    
T  2391046 atatattatgcattgttcttaccaactgagctaagttcacggaga 2391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 5526764 - 5526724
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  5526764 atatattatgcattgtccataccaactgagctaagctcacg 5526724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 10690938 - 10690878
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgca 140  Q
    ||||| |||| |||||||| |||||||| |||||||| || ||||||||||||| ||||||    
T  10690938 tttaattgtggagaagtggggtgtttggggttcgaactccgacccctgcatataatatgca 10690878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 22690046 - 22690098
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| || ||||||||||||||||| ||| ||  ||||||||||||||||||    
T  22690046 cccaaaccttgcatatattatgcattattcttagcaactgagctaagctcacg 22690098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 25251549 - 25251505
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||||||||||| |||  ||||||| ||||||||||||||    
T  25251549 atatattatgcattgtttataccaactgagttaagctcacggaga 25251505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 37307893 - 37307929
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaa 162  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  37307893 tgcatatattatgcattgttcctatcaactgagctaa 37307929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 39280837 - 39280881
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||    
T  39280837 tgcatatattatgcattgttcttaccaactgagctaagttcacgg 39280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 48527232 - 48527188
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||| ||||||| |||||||||||    
T  48527232 tgcatatattatgcattgtccttatcaactgagataagctcacgg 48527188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 48980526 - 48980486
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  48980526 atatattatgcattgtccataccaactgagctaagctcacg 48980486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 49750383 - 49750474
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||| |||||||| |||| |||| |||||| |||| |||||||||||| |||||| | | | ||| ||||||||||||||||||    
T  49750383 attttaaatgtgaagaagtggggtgtctggaattcgaaccccagcccctgcatataatatgcaatatccctatcaactgagctaagctcacg 49750474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 25883944 - 25884058
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgca-ttgttcatattaact 155  Q
    |||||| || |||||||| | |||||||||||| |||||||| ||||  || ||||||| ||| |||||||||||||||||||| |||| | ||  ||||    
T  25883944 cctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgcatttgtccctaccaact 25884043  T
Q  156 gagctaagctcacgg 170  Q
     ||||||||||||||    
T  25884044 aagctaagctcacgg 25884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 22722444 - 22722401
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  22722444 tgcatattttatgcattgttcatactaactgagctaagctcacg 22722401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 43490436 - 43490479
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  43490436 tgcatatattatgcattgttcataccaactgagctaagctcacg 43490479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 20370283 - 20370343
Alignment:
Q  110 gttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||| || || ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  20370283 gttcgaaccctaaaccttgcatattttatgcattgtccatatcaactgagctaagctcacg 20370343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 47099054 - 47099098
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||    
T  47099054 tgcatatattatgcattattcttatcaactgagctaagctcacgg 47099098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 5941313 - 5941356
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  5941313 tgcatatattatgcattgttcataccaactgagttaagctcacg 5941356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 7868764 - 7868721
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||    
T  7868764 tgcatatattatgcattgttcttaccaactgagctaagctcacg 7868721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 8942059 - 8942016
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  8942059 tgcatatattatgcattgttcataccaactgagttaagctcacg 8942016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 10498714 - 10498757
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  10498714 tgcatatattatgcattgtccataccaactgagctaagctcacg 10498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 21331436 - 21331479
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  21331436 tgcatatattatgcattgtccataacaactgagctaagctcacg 21331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 41215066 - 41215109
Alignment:
Q  76 tatattttaaatgtgtagaagtggtgtgtttggagttcgaaccc 119  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||||    
T  41215066 tatattttaaatgtggagaagtggtgtgtttggggtttgaaccc 41215109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 44764810 - 44764724
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||| |||||||| ||||  || ||||||||||  |||||||||| |||||||| ||| | ||  ||||||||||||||||||    
T  44764810 ttaaatgtggagaagtggagtgtccggggttcgaacccg-cccctgcataaattatgcaatgtccctaccaactgagctaagctcacg 44764724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 52453276 - 52453319
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | |||||||| |||||||||||||    
T  52453276 tgcatatattatgcattgtccctattaactaagctaagctcacg 52453319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 4227734 - 4227816
Alignment:
Q  92 agaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||| ||||  |||||||||||||  ||||||||||| |||||||| ||| | ||  ||||||||||| ||||||||||    
T  4227734 agaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaactgagctaaactcacggaga 4227816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 11508499 - 11508545
Alignment:
Q  123 ccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||| ||||||||| ||||| ||| ||||||||||||||    
T  11508499 ccctgcatatatcatgcattgtccatatcaaccgagctaagctcacg 11508545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 13800709 - 13800667
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||| ||  |||||||||||||||||    
T  13800709 tgcatatattatgcattgttcttaccaactgagctaagctcac 13800667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 14894753 - 14894711
Alignment:
Q  127 gcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||| |||| ||||||||||| |||||||    
T  14894753 gcatatattatgcattgtccatagtaactgagctacgctcacg 14894711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 20537922 - 20537884
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctc 166  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  20537922 catatattatgcattgtccatatcaactgagctaagctc 20537884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 32023507 - 32023413
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||||||| |||| ||  |||| ||| |||| ||| | | |||||||||||||||||| ||||| ||| || ||| ||||||| |||||||    
T  32023507 attttaaatgtgaagaaatgaggtgtatggggttcaaactctagccctgcatatattatgcaatgttcctatcaattgatctaagcttacggaga 32023413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 53996341 - 53996299
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  53996341 tgcatatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 6062794 - 6062859
Alignment:
Q  80 ttttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgt 144  Q
    ||||||||||| |||||||| |||| ||| ||||||| | ||||||||||||||| ||| ||||||    
T  6062794 ttttaaatgtggagaagtggagtgtctggggttcgaatctcaacccctgcatataatatacattgt 6062859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 8113581 - 8113626
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgga 171  Q
    ||||||||||||||||||| | ||  ||||||||||||||||||||    
T  8113581 tgcatatattatgcattgtccttaccaactgagctaagctcacgga 8113626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 12976621 - 12976670
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    ||||||||||||||||||| | ||| ||||||| ||| ||||||||||||    
T  12976621 tgcatatattatgcattgtccctatcaactgagttaaactcacggagata 12976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 23653215 - 23653284
Alignment:
Q  101 gtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| || ||||||||||  |||||||||||||||||||| ||||| ||  ||||||| ||||||||||    
T  23653215 gtgttcggggttcgaaccccgacccctgcatatattatgcaatgttcttaccaactgagttaagctcacg 23653284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 26880268 - 26880199
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcata 149  Q
    |||||||||| |||||||| |||| || |||||||| ||| ||||||||||| |||||||| ||| ||||    
T  26880268 tttaaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgcaatgtccata 26880199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 29631228 - 29631187
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||| ||||  ||||||||||||||||    
T  29631228 tgcatatattatgcattgtccataccaactgagctaagctca 29631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 2496594 - 2496554
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  2496594 atatattatgcattgttcatagcaactgaactaagctcacg 2496554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 7938763 - 7938723
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  7938763 atatattatgcattgttcataccaactgaactaagctcacg 7938723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 20612287 - 20612339
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| || ||||||||||||||||||||||  | || |||||||||||||||    
T  20612287 cccaaaccttgcatatattatgcattgttcaagtcaaatgagctaagctcacg 20612339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 21549097 - 21549041
Alignment:
Q  110 gttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagct 165  Q
    |||||||||| || || |||||||||||| |||||| ||||| ||||||||||||||    
T  21549097 gttcgaaccctaaaccttgcatatattatacattgtccatatcaactgagctaagct 21549041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 22486725 - 22486681
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||||| ||  ||||||| |||||||||||    
T  22486725 tgcatatattatgcattgttcttaccaactgagttaagctcacgg 22486681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 22501916 - 22502000
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||||||| |||| ||| |||||||||| | |||||||||||| |||||| | | | ||  |||||||||||||||||||    
T  22501916 tgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 22502000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 24428492 - 24428532
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctc 166  Q
    ||||||||||||||||||| ||||  |||||||||||||||    
T  24428492 tgcatatattatgcattgtccataccaactgagctaagctc 24428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 30200885 - 30200821
Alignment:
Q  110 gttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||| ||| || ||||||||||||||||||| | ||  ||||||||||||||||| ||||    
T  30200885 gttcgaacctcaaaccttgcatatattatgcattgtccttagcaactgagctaagctcacagaga 30200821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 33745141 - 33745097
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||| ||||||||||| ||||| || ||||||||||||||||    
T  33745141 tgcatattttatgcattgtccatatcaattgagctaagctcacgg 33745097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 36472388 - 36472472
Alignment:
Q  59 ctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcatt 142  Q
    ||||| || |||||||| | ||||| |||||| ||||||||  ||||||||||||||| ||| || |||||||| | ||||||||    
T  36472388 ctagtggctggagctcacacatttttaatgtggagaagtgggttgtttggagttcgaatcccgactcctgcatacaatatgcatt 36472472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 36625161 - 36625237
Alignment:
Q  92 agaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    |||||||| ||||| |||||||||| |||||| |||||||||| |||||| | | | ||  ||||||||||||||||    
T  36625161 agaagtggagtgttcggagttcgaaccccaactcctgcatataatatgcaatatccctaccaactgagctaagctca 36625237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 39966059 - 39966143
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||||||| |||| ||  ||||||||| ||||||||||||||| |||||| | | | ||  |||||||||||||||||||    
T  39966059 tgtggagaagtggagtgtctgaggttcgaacctcaacccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 39966143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 42269338 - 42269298
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||| |||| |||||||||||| |||||    
T  42269338 catatattatgcattgtccatactaactgagctaaactcac 42269298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 42920603 - 42920679
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatata 133  Q
    |||||| ||| ||||||| | | ||||| |||| |||||||| |||| ||| |||||||||| ||||||||||||||    
T  42920603 cctagtggccagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccaacccctgcatata 42920679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 51882219 - 51882263
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| ||||  ||||||| |||||||||||    
T  51882219 tgcatatattatgcattgtccataccaactgagttaagctcacgg 51882263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 53681896 - 53681940
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||||| ||  ||||||| |||||||||||    
T  53681896 tgcatatattatgcattgttcttaccaactgaggtaagctcacgg 53681940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 15939403 - 15939320
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgca 140  Q
    |||||| || |||||||| | |||||||||||| |||||||| ||||| || |||||||||| |||| ||||||||||||||||    
T  15939403 cctagtggctggagctcacacattttaaatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgca 15939320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 40546358 - 40546315
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  40546358 tgcatatattatgcattgttcttattaactgagctaagctcacg 40546315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 15637638 - 15637598
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  15637638 catatattatacattgttcatattaactgagctaagctcac 15637598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 19967460 - 19967417
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  19967460 tgcacatattatgcattgttcatatcaactgagctaagctcacg 19967417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 24305324 - 24305367
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  24305324 tgcatattttatgcattgtccatattaactgagctaagctcacg 24305367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 33064028 - 33063985
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  33064028 tgcatatattatgcattgtccatatcaactgagctaagctcacg 33063985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 3196600 - 3196559
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  3196600 catatattatgcattgttcatatcaactgagcaaagctcacg 3196559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 4238799 - 4238759
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  4238799 catatattatgcattgtccatactaactgagctaagctcac 4238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 9383219 - 9383271
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| || ||||||||||||||||||| ||||  ||||||||||||||||||    
T  9383219 cccaaaccttgcatatattatgcattgtccataccaactgagctaagctcacg 9383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 22520259 - 22520215
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||    
T  22520259 tgcatatattatgcattgttcttactaactgaactaagctcacgg 22520215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 41566847 - 41566763
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||||||| |||| |||  ||||||| |||||||||||||||| |||||| | ||| ||  |||||||||||||||||||    
T  41566847 tgtggagaagtggagtgtctgggattcgaactccaacccctgcatataatatgcaatattcctaccaactgagctaagctcacgg 41566763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 1861828 - 1861871
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||    
T  1861828 tgcatatattatgcattgtccatatcagctgagctaagctcacg 1861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 7201549 - 7201506
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||| |  ||||||||||||||||||    
T  7201549 tgcatatattatgcattgttcaaaccaactgagctaagctcacg 7201506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 7717562 - 7717637
Alignment:
Q  59 ctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatata 133  Q
    ||||| ||||||||||| | |||||||||||| |||||||| ||||  | |||||||| ||| |||||||||||||    
T  7717562 ctagtggccggagctcacacattttaaatgtggagaagtggagtgtccgaagttcgaaccccgacccctgcatata 7717637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 9519733 - 9519776
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  9519733 tgcatatattatgcattgtccatatcaattgagctaagctcacg 9519776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 10195681 - 10195724
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||    
T  10195681 tgcatatattatgcattatccatatcaactgagctaagctcacg 10195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 18254693 - 18254642
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccc 119  Q
    |||||||| | |||||||||||| |||||||| |||| ||||||||||||||    
T  18254693 ggagctcacacattttaaatgtgaagaagtggggtgtctggagttcgaaccc 18254642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 19159983 - 19159944
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagct 165  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  19159983 tgcatatattatgcattgttcatatcaactgagttaagct 19159944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 24593418 - 24593371
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||||||||||||| | ||  ||||||||||||||||||||||    
T  24593418 tgcatatattatgcattgtccttaccaactgagctaagctcacggaga 24593371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 25186261 - 25186304
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  25186261 tgcatatattatgcattgtccatatcaactgagctaaactcacg 25186304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 27244699 - 27244656
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  27244699 tgcatatattatgcattgtccctatcaactgagctaagctcacg 27244656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 29979943 - 29979986
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  29979943 tgcatatattatgcattgttcttattaactgagttaagcccacg 29979986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 35727498 - 35727435
Alignment:
Q  108 gagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||| || || ||||||||||||||||||||| ||  ||||||| |||||||||||    
T  35727498 gagttcgaaccccaaaccttgcatatattatgcattgttcttaccaactgagttaagctcacgg 35727435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 37119272 - 37119319
Alignment:
Q  121 acccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||| ||||||||||||||||||||||||| ||||||| ||| |||||    
T  37119272 acccttgcatatattatgcattgttcatatcaactgagttaaactcac 37119319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 39068727 - 39068770
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  39068727 tgcatatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 39635393 - 39635326
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgtt 145  Q
    |||||||||||| |||||||| |||| ||||||||||| ||| |||||  ||||||||||||| ||||    
T  39635393 attttaaatgtggagaagtggagtgtctggagttcgaaccccgaccccaacatatattatgcaatgtt 39635326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 41668697 - 41668658
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagct 165  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  41668697 tgcatatattatgcattgttcataccaactgagctaagct 41668658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 7000960 - 7001026
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcattgt 144  Q
    |||||| ||||  |||||||| |||||||  |||||||||| ||| |||||||||||||||||||||    
T  7000960 attttacatgtaaagaagtggagtgtttgaggttcgaaccctaactcctgcatatattatgcattgt 7001026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 12893265 - 12893307
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  12893265 catatattatacattgttcttatcaactgagctaagctcacgg 12893307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 29734733 - 29734691
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||    
T  29734733 tgcatatattatgcattgtccatatcaactgagctaaactcac 29734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 36748990 - 36748889
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctc 166  Q
    |||||||| | |||||||||||| |||||||| ||||| | |||||||| ||| |||||||||| || |||||| ||| | ||  ||||||| |||||||    
T  36748990 ggagctcacacattttaaatgtggagaagtggagtgttcgaagttcgaaccccgacccctgcat-taatatgcaatgtccctaccaactgagttaagctc 36748892  T
Q  167 acg 169  Q
    |||    
T  36748891 acg 36748889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 38443537 - 38443579
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||||||  ||||||| |||||||||    
T  38443537 tgcatatattatgcattgttcatacgaactgagttaagctcac 38443579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 40853837 - 40853879
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||  ||||||| |||||||||||||||||    
T  40853837 tgcatatattatgcatatttcatatcaactgagctaagctcac 40853879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 10332296 - 10332337
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| | ||| ||||||||||||||||||    
T  10332296 catatattatgcattgtccttatcaactgagctaagctcacg 10332337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 17280967 - 17281008
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  17280967 tgcatatattatacattattcatatcaactgagctaagctca 17281008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 17736833 - 17736792
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  17736833 catattttatgcattgttcataccaactgagctaagctcacg 17736792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 23405246 - 23405197
Alignment:
Q  121 acccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||||||||||| ||| | ||  |||||||||||||||||||    
T  23405246 acccctgcatatattatgcaatgtccctaccaactgagctaagctcacgg 23405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 28202337 - 28202296
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| | ||| ||||||||||||||||||    
T  28202337 catatattatgcattgtccctatcaactgagctaagctcacg 28202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 30956471 - 30956430
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  30956471 tgcatataatatgcattgttcataccaactgagctaagctca 30956430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 6228676 - 6228636
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctc 166  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  6228676 tgcatatattatgcattgtttatatcaattgagctaagctc 6228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 7262845 - 7262805
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  7262845 atatattatgcattgtccatatcaactgagctaaggtcacg 7262805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 9517031 - 9517071
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||  ||||||||||| ||||||    
T  9517031 atatattatgcattgttcataccaactgagctaatctcacg 9517071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 9547419 - 9547467
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagct 165  Q
    ||||| || ||||||||||||||||||| ||||| ||||||| ||||||    
T  9547419 cccaaaccttgcatatattatgcattgtccatatcaactgagttaagct 9547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 18231492 - 18231536
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||    
T  18231492 tgcatatattatgcattgtccttaccaactgagctaagctcacgg 18231536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 19179069 - 19179113
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||    
T  19179069 tgcatatattatgcattgtccttaccaactgagctaagctcacgg 19179113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 20200747 - 20200704
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||    
T  20200747 tgcatatattatgcattgttcatactaattgag-taagctcacgg 20200704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 22653611 - 22653719
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||| | ||||| |||| |||||||| ||||  || ||||||||||  || |||||||||| |||||| | | | ||  ||||||||||||||||    
T  22653611 gagctcatacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctaccaactgagctaagctca 22653710  T
Q  168 cggagatat 176  Q
    ||| |||||    
T  22653711 cggggatat 22653719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 23919457 - 23919549
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||| |||| ||| |||| |||  |||||||||  |||||| ||||||||||||| ||| | ||  ||||||||||||||||| ||||    
T  23919457 ttaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctaccaactgagctaagctcacagaga 23919549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 24393287 - 24393243
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||    
T  24393287 tgcatatattatgcattgtccttaacaactgagctaagctcacgg 24393243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 33117430 - 33117466
Alignment:
Q  132 tattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  33117430 tattatgcattattcatactaactgagctaagctcac 33117466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 33563189 - 33563241
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatata 133  Q
    ||||| |||| |||||||| |||| ||| |||||||||| |||||||||||||    
T  33563189 tttaattgtggagaagtggagtgtctggggttcgaacccgacccctgcatata 33563241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 34463641 - 34463709
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttc 146  Q
    |||||||||||| ||||||||  |||| |||||||||||| || ||| |||||||| |||||| |||||    
T  34463641 attttaaatgtgaagaagtgggatgttcggagttcgaacctcagcccatgcatatagtatgcaatgttc 34463709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 39761480 - 39761436
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||| ||||||||||| |||||||    
T  39761480 tgcatatattatgcattgtccttatcaactgagctaaactcacgg 39761436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 44658379 - 44658331
Alignment:
Q  122 cccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||| |||||| | ||| || ||||||||||||||||||||    
T  44658379 cccctgcatataatatgcaatattcctactaactgagctaagctcacgg 44658331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 27449464 - 27449507
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27449464 tgcatatattatgcattgtccatattaactgagctaagctcacg 27449507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 52426893 - 52426986
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacggagat 174  Q
    ||||||||| |||| ||| |||| ||||||||||||| |  |||||||||||| |||||| | | | ||| |||||||||||||||||||||||    
T  52426893 ttaaatgtggagaaatggggtgtctggagttcgaaccacggcccctgcatataatatgcaatatccctatcaactgagctaagctcacggagat 52426986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 1794638 - 1794595
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  1794638 tgcatatattatgcattgtccatactaactgagctaagctcacg 1794595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 48681952 - 48681995
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  48681952 tgcatatattatgcattgttcataccaactgagctaagctcacg 48681995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 52431925 - 52431850
Alignment:
Q  70 agctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgtt 145  Q
    |||||| |||||||||||||| |||||||  |||||||| ||| ||||||   |||||||||||||||||| ||||    
T  52431925 agctcacatattttaaatgtggagaagtgaggtgtttggggtttgaacccggtccctgcatatattatgcaatgtt 52431850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 3393587 - 3393629
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  3393587 tgcatatattatgcattgttcatatcaactgagctaaactcac 3393629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 33229654 - 33229748
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||||||| |||||||| ||||| |||||| |||     || |||||||||||||||||||||| ||  ||||||| ||||||||| ||||    
T  33229654 attttaaatgtggagaagtggggtgttcggagtttgaatatggcctctgcatatattatgcattgttcctaccaactgagttaagctcacagaga 33229748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 4865790 - 4865891
Alignment:
Q  70 agctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||| |||| ||||||||| |||||||| ||||| || |||||||| || |||||| ||||||||||||| ||| | ||  ||||||| |||||| ||    
T  4865790 agctcacatatattaaatgtgaagaagtggagtgttcggggttcgaactccgacccctacatatattatgcaatgtccctaccaactgagttaagctaac 4865889  T
Q  169 gg 170  Q
    ||    
T  4865890 gg 4865891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 23045231 - 23045190
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  23045231 catatattatgcattgttcatattaacggagttaagctcacg 23045190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 26763566 - 26763611
Alignment:
Q  130 tatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  26763566 tatattatgcattgttcttatcaactgagctaagctcacggggata 26763611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 35111724 - 35111647
Alignment:
Q  94 aagtggtgtgtttggagttcgaacccaacccctgcatatatta-tgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||| ||||| || ||||||||||  |||||||||||| || |||||||||| ||| |||||||||| ||||||||    
T  35111724 aagtggggtgttaggggttcgaaccccgcccctgcatataataatgcattgttcctatcaactgagctatgctcacgg 35111647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 177
Target Start/End: Original strand, 35605602 - 35605699
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacggagatatc 177  Q
    ||||| |||| |||||||| |||||| | ||||||||||  ||||||||||||| |||||| | | | ||  ||||||||||||||||||| ||||||    
T  35605602 tttaattgtggagaagtggggtgtttagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacggggatatc 35605699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 45140025 - 45140069
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||    
T  45140025 tgcatatattatgcattgtccataccaactgagctaagctcacgg 45140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 51127912 - 51127952
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  51127912 atatattatgcattgtccatattaactgagctaaactcacg 51127952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 2997622 - 2997725
Alignment:
Q  67 cggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagct 165  Q
    ||||||||| ||||||||||| || ||| |||| ||||  || ||||||| |||  |||||||||| |||||||| ||| | || ||||||||| |||||    
T  2997622 cggagctcacatattttaaatatggagatgtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccctactaactgagcaaagct 2997721  T
Q  166 cacg 169  Q
    ||||    
T  2997722 cacg 2997725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 12404458 - 12404387
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgca 140  Q
    ||||||||| | ||||| |||| |||||||| ||||| || |||||||||| | ||||||||||| ||||||    
T  12404458 gagctcatacaatttaattgtggagaagtggggtgttcggggttcgaaccccagccctgcatataatatgca 12404387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 16967213 - 16967256
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||    
T  16967213 tgcatatattatgcattgtccatatcaactaagctaagctcacg 16967256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 26349999 - 26350038
Alignment:
Q  94 aagtggtgtgtttggagttcgaacccaacccctgcatata 133  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  26349999 aagtggggtgtttggggttcgaacccaacccctgcatata 26350038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 26755658 - 26755615
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  26755658 tgcatatataatgcattgtccatatcaactgagctaagctcacg 26755615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 42045391 - 42045434
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  42045391 tgcatatattatgcattgtccataccaactgagctaagctcacg 42045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 142
Target Start/End: Complemental strand, 42735985 - 42735910
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcatt 142  Q
    |||||||| | |||||||||||  |||||||| ||||  ||| ||| |||||| ||||||||||||||||||||||    
T  42735985 ggagctcacacattttaaatgtagagaagtggggtgtccggaattcaaacccagacccctgcatatattatgcatt 42735910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 44641569 - 44641526
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  44641569 tgcatatattatgcattgtccatatcaactgagctaaactcacg 44641526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 5291104 - 5291154
Alignment:
Q  123 ccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||||||||||||||||||| ||  ||||||| | ||||||||||||    
T  5291104 ccctgcatatattatgcattgttcctaccaactgagttgagctcacggaga 5291154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 8253781 - 8253739
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  8253781 tgcatatattatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 12214035 - 12213993
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||    
T  12214035 tgcatatattatgtattgttcctatcaactgagctaagctcac 12213993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 15382838 - 15382880
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||||| |||||||||||| ||||||| |||||||||    
T  15382838 tgcatatattatacattgttcatatcaactgagttaagctcac 15382880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 28832190 - 28832232
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||||||||  ||||||| |||||||||    
T  28832190 tgcatatattatgcattgttcataccaactgagttaagctcac 28832232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 10292976 - 10292931
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||||||||||| | ||| ||||||| ||||||||||||||    
T  10292976 catatattatgcattgtccctatcaactgagttaagctcacggaga 10292931  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 11215086 - 11215001
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgga 171  Q
    |||| |||||||| |||| ||| ||||||||| || |||||||||||| |||||| | | | ||  ||||||||||||||||||||    
T  11215086 tgtggagaagtggagtgtctggggttcgaacctcagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgga 11215001  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 23915531 - 23915572
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||| ||||||| || |||||||    
T  23915531 catatattatgcattgttcatatcaactgagatatgctcacg 23915572  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 26834560 - 26834519
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  26834560 catattttatgcatcgttcatatcaactgagctaagctcacg 26834519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 38214010 - 38214051
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| || ||||||||||||||||||||    
T  38214010 atatattatacattgttcctactaactgagctaagctcacgg 38214051  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 47469053 - 47469142
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  || ||||||||| || |||||||||| |||||||| ||| | |   |||||||||||||||||||    
T  47469053 ttaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccctgccaactgagctaagctcacgg 47469142  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 50372383 - 50372420
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctc 166  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  50372383 atatattatgcattgtttatatcaactgagctaagctc 50372420  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 1605438 - 1605390
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacggagat 174  Q
    ||||||| ||||||||||| |||| ||||| ||||||||||||| ||||    
T  1605438 tgcatattttatgcattgtccatactaactaagctaagctcacgaagat 1605390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 3157739 - 3157779
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| | ||| |||||||||||||||    
T  3157739 atatattatgcattgttcaaactaattgagctaagctcacg 3157779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 7191123 - 7191027
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacggagatat 176  Q
    ||||| |||| |||||||  ||||  || |||||||||| | |||||||||||| |||||| | | | ||| |||||||||||| ||||||||||||    
T  7191123 tttaattgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatataatatgcaatatccctatcaactgagctaaggtcacggagatat 7191027  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 7550935 - 7550895
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| ||||||||||||||||| ||||||| ||||||||||    
T  7550935 atattttatgcattgttcatatcaactgagttaagctcacg 7550895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 8148384 - 8148428
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||| ||||||| ||  |||||||||||||||||||    
T  8148384 tgcatatattatgtattgttcttaccaactgagctaagctcacgg 8148428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 11333754 - 11333662
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||| |||||||| ||||  || |||||||| ||  |||||||||| |||||||| ||| | ||  |||||||||||| |||||||||    
T  11333754 ttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaactgagctaagttcacggaga 11333662  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 11491775 - 11491683
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||| |||||||| ||||  || |||||||| ||  |||||||||| |||||||| ||| | ||  |||||||||||| |||||||||    
T  11491775 ttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaactgagctaagttcacggaga 11491683  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 14520986 - 14520942
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||| ||||||||||| ||||  |||||||||||||||||||    
T  14520986 tgcatattttatgcattgtccataccaactgagctaagctcacgg 14520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 17283993 - 17283949
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||    
T  17283993 tgcatatattatgcattgtccttaccaactgagctaagctcacgg 17283949  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 18607789 - 18607877
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||  |||||||| ||||| || |||||||||| | |||||||||| |||||||| ||| | ||  |||| |||||||||||||    
T  18607789 ttaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgcaatgtccctaccaactcagctaagctcacg 18607877  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 21400025 - 21400085
Alignment:
Q  110 gttcgaacccaacccct-gcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||  ||| |||||||||||||||||| | ||  ||||||||||||||||||    
T  21400025 gttcgaacccaagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 21400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 24874187 - 24874139
Alignment:
Q  122 cccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||| |||||||| ||| | ||| |||||||||||||||||||    
T  24874187 cccctgcataaattatgcaatgtccctatcaactgagctaagctcacgg 24874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 27853394 - 27853354
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  27853394 atatattatgcattgttcataccaactgagttaagctcacg 27853354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 34485917 - 34485869
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacggagatat 176  Q
    ||||||||||||||| | |  || |||||||||||||||||||||||||    
T  34485917 catatattatgcattatccccatcaactgagctaagctcacggagatat 34485869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 35308224 - 35308184
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  35308224 atatattatgcattgttcataccaactgaactaagctcacg 35308184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 38448885 - 38448929
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||    
T  38448885 tgcatatattatgcattgtccttaccaactgagctaagctcacgg 38448929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 41032970 - 41032930
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| ||||||||||||||||| ||||||| ||||||||||    
T  41032970 atattttatgcattgttcatatcaactgagttaagctcacg 41032930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 43021602 - 43021694
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    ||||||||| |||||||| ||||  |  ||||||||||  ||||||||||| | |||||||||| | ||  |||| |||||||||||||||||    
T  43021602 ttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccctaccaactaagctaagctcacggaga 43021694  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 51989363 - 51989323
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  51989363 atatattatacattgttcttattaactgagctaagttcacg 51989323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 15095 - 15005
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacgga 171  Q
    ||||||||| |||||||| |||||||| |||||||||   ||||||||||| |||||||| ||| | ||  ||||||||||||||||||||    
T  15095 ttaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctaccaactgagctaagctcacgga 15005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 13059133 - 13059246
Alignment:
Q  58 cctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactg 156  Q
    |||||| || ||||| || | |||||||||||| |||||||| ||||  || ||||||||||   |||||||||| |||||||||||| | ||  |||||    
T  13059133 cctagtggctggagcacacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtccctaccaactg 13059232  T
Q  157 agctaagctcacgg 170  Q
    ||||||||||||||    
T  13059233 agctaagctcacgg 13059246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 18148824 - 18148864
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  18148824 atatattatgcattgttcatattaactgagttaagctcacg 18148864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 27718913 - 27718956
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  27718913 tgcatatattatgcattgtccatatcaactgagctaagctcacg 27718956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 37750018 - 37750061
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||    
T  37750018 tgcatatattatgcattgttcatatcaactgagctaaactcacg 37750061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 42367769 - 42367727
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  42367769 catatattatgcattgttcttatcaactgagctaagctcacgg 42367727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 16449210 - 16449126
Alignment:
Q  87 tgtgtagaagtggtgtgtttggagttcgaaccc-aacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||| |||||||| |||| ||| |||||||||| |||||||||||||| |||||| | | | ||  |||||||||||||||||||    
T  16449210 tgtggagaagtggagtgtctggggttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 16449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 39362357 - 39362261
Alignment:
Q  80 ttttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggagata 175  Q
    |||| |||||| |||||||| |||| ||| |||||||| |||||| ||||||||| |||||| | | | ||  ||||||||||||||||||| ||||    
T  39362357 tttttaatgtggagaagtggggtgtctggggttcgaactccaacctctgcatataatatgcaatatccctaccaactgagctaagctcacggggata 39362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 5728580 - 5728537
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||  || ||||||||||||||||||    
T  5728580 tgcatatattatgcattgttctcatcaactgagctaagctcacg 5728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 14181308 - 14181411
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctc 166  Q
    |||||||||| |||||||||| | |||||||   |||  |  ||||||| ||||||| |||||||||||||||| ||| | ||| |||||| ||||||||    
T  14181308 ggagctcatacattttaaatgcggagaagtgagatgtcggaggttcgaatcccaacctctgcatatattatgcaatgtccttatcaactgatctaagctc 14181407  T
Q  167 acgg 170  Q
    ||||    
T  14181408 acgg 14181411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 15187378 - 15187429
Alignment:
Q  94 aagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgt 144  Q
    |||||| |||||||||||||||| |||||||| |||||||||| ||||||||    
T  15187378 aagtggggtgtttggagttcgaaccccaacccgtgcatatattgtgcattgt 15187429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 22437771 - 22437858
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||| |||| ||  |||| ||| |||||||| ||||||||||||| |||||||| | | | ||  ||||||||||||||||||    
T  22437771 ttaaatgtggagaactgaggtgtctggggttcgaactcaacccctgcataaattatgcaatatccctaccaactgagctaagctcacg 22437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 32878702 - 32878659
Alignment:
Q  127 gcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||||||||||| ||  |||||||||||||||||||    
T  32878702 gcatatattatgcattgttcttaccaactgagctaagctcacgg 32878659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 39433452 - 39433409
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||    
T  39433452 tgcatattttatgtattgttcatatcaactgagctaagctcacg 39433409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 40392044 - 40392103
Alignment:
Q  108 gagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    |||||||||||| | || |||||||||||| |||||||||||  ||||||| ||||||||    
T  40392044 gagttcgaacccgaaccttgcatatattatccattgttcataccaactgaggtaagctca 40392103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 133506 - 133416
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaaccca-acccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||| |||| | |||||| ||||| |||||||||||||  || |||||||||| |||||| | | | ||| |||||||||||||||||||    
T  133506 tttaactgtggaaaagtggagtgttcggagttcgaaccccgactcctgcatataatatgcaatatccctatcaactgagctaagctcacgg 133416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 2060577 - 2060539
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagc 164  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  2060577 tgcatatattatgcattgttcttatcaactgagctaagc 2060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 5962885 - 5962791
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||||||| |||| ||  ||||  || |||||||| | | ||||||||||||||| || |||||  || || |||||||||||||||||||    
T  5962885 attttaaatgtgaagaaatgaggtgtccggggttcgaactctagccctgcatatattatccaatgttccgatcaattgagctaagctcacggaga 5962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 12770458 - 12770372
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||| |||||||| ||||  || ||||||||||   |||||||||| |||||||| ||| | ||| ||||||||||||||||    
T  12770458 ttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctatcaactgagctaagctca 12770372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 14975879 - 14975925
Alignment:
Q  123 ccctgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  14975879 ccctgcatattttatgcactgttcataccaactgagctaagctcacg 14975925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 24195291 - 24195249
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||    
T  24195291 tgcatatattatgtattgttcatatcaactgagctaagttcac 24195249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 24296884 - 24296938
Alignment:
Q  117 cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgga 171  Q
    ||||||||||||||||| |||||| | | | || |||||||||||||||||||||    
T  24296884 cccaacccctgcatataatatgcaatatccctactaactgagctaagctcacgga 24296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 30427773 - 30427731
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  30427773 tgcatatattatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 41272185 - 41272095
Alignment:
Q  81 tttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||| |||||||||||||   ||||||||| |||| |||||||||| |||||||| ||| | || ||| |||||||  |||||||    
T  41272185 tttaaatgtggagaagtggtgtgtccagagttcgaaccccagcccctgcataaattatgcaatgtccctactaattgagctatactcacgg 41272095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 41625234 - 41625192
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||| ||||||  |||||||||||||||||||    
T  41625234 catatattatgcattattcataccaactgagctaagctcacgg 41625192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 42023514 - 42023409
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctc 166  Q
    |||||||| |||||||||||||| ||||||||  |||  || |||| |||| | ||||||||||| |||||||| || || ||  |||||||||||||||    
T  42023514 ggagctcacatattttaaatgtggagaagtgggatgtcaggggttcaaacctctacccctgcataaattatgcaatg-tcctaccaactgagctaagctc 42023416  T
Q  167 acggaga 173  Q
    | |||||    
T  42023415 atggaga 42023409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 44615773 - 44615679
Alignment:
Q  79 attttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcacggaga 173  Q
    |||||||||||| |||| ||  ||||  || |||||||| | | |||||||||||||||||| |||||  || || ||||||||||||| |||||    
T  44615773 attttaaatgtgaagaaatgaggtgtccggggttcgaactctaaccctgcatatattatgcaatgttccgatcaattgagctaagctcaaggaga 44615679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 481101 - 481012
Alignment:
Q  82 ttaaatgtgtagaagtggtgtgtttggagttcgaacc-caacccctgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||| |||||||| ||||  || ||||||||| |  |||||||||| |||||||| ||| | ||  |||||||||||||||||||    
T  481101 ttaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactgagctaagctcacgg 481012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 2908112 - 2908157
Alignment:
Q  122 cccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||||||| | || ||||| |||||||||||    
T  2908112 cccctgcatatattatgcattgtccctactaactaagctaagctca 2908157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 6038296 - 6038337
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||| |||||||||||| |||||    
T  6038296 catatattatgcattgtccatatcaactgagctaagttcacg 6038337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 11483222 - 11483121
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaacccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||||| | ||||| |||| |||||||| ||||  |  ||||||||||  | |||||||||| |||||| | ||| || ||||||||||| ||||||    
T  11483222 gagctcatacaatttaattgtggagaagtggagtgtccgaggttcgaaccccgctcctgcatataatatgcaatattcctactaactgagctacgctcac 11483123  T
Q  169 gg 170  Q
    ||    
T  11483122 gg 11483121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 12886097 - 12886056
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| || |||||||| ||||||||||    
T  12886097 catatattatgcattgttcctagtaactgagttaagctcacg 12886056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 13105195 - 13105118
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaa-cccaacccctgcatatattatgcattgt 144  Q
    |||||||| | |||||||||||| |||||||| |||| ||  ||||||| |||  ||| |||||||||||||||||||    
T  13105195 ggagctcacacattttaaatgtggagaagtggggtgtctgaggttcgaaccccggcccttgcatatattatgcattgt 13105118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 15188939 - 15188898
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| |||| |||||||| ||||||||||    
T  15188939 catatattatgcattgtccatactaactgagttaagctcacg 15188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 21557473 - 21557432
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| |||| |||||||| ||||||||||    
T  21557473 catatattatgcattgtccatactaactgagttaagctcacg 21557432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 29652260 - 29652219
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||    
T  29652260 tgcatatattatgcattgttcttatcaactgagctaaactca 29652219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 31085885 - 31085926
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||| ||||| |||||||||||| ||||||||||||||||||    
T  31085885 catacattatacattgttcatatcaactgagctaagctcacg 31085926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 32115427 - 32115468
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  32115427 catatattatgcattgtccatattaactgaactaaactcacg 32115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 40316896 - 40316855
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||    
T  40316896 catatattatgcattattcatatcaactgagataagctcacg 40316855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 44553695 - 44553594
Alignment:
Q  69 gagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||| ||||| |||| |||||||| ||||| || ||| |||| || |||||||||||||  ||||||| | | ||  ||||||||||| ||||    
T  44553695 gagctcatataatttaagtgtggagaagtggagtgttcggggtttgaactccgacccctgcatataacatgcattatacctaccaactgagctaaactca 44553596  T
Q  168 cg 169  Q
    ||    
T  44553595 cg 44553594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 574424 - 574384
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||||||||||  |||| |||||||||||||||||    
T  574424 catatattatgcattgtctatatcaactgagctaagctcac 574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 10320536 - 10320488
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacggagatat 176  Q
    ||||||||||||||| ||| ||| ||||||||||| ||||||| |||||    
T  10320536 catatattatgcattattcttatcaactgagctaaactcacggggatat 10320488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 11053018 - 11052978
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctc 166  Q
    ||||||||||||||||||| |||| |||||||| |||||||    
T  11053018 tgcatatattatgcattgtccatactaactgagttaagctc 11052978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 14583310 - 14583226
Alignment:
Q  59 ctagttgccggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaa-cccctgcatatattatgcatt 142  Q
    ||||| || |||||||| | || || |||||| |||||||| ||||| |  |||||||||| | |||||||||||||||||||||    
T  14583310 ctagtggctggagctcacacatatttaatgtggagaagtggggtgttcgtggttcgaaccccagcccctgcatatattatgcatt 14583226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 19778107 - 19778063
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||    
T  19778107 tgcatatattatgcattgtccttaccaactgagctaagctcacgg 19778063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 20872449 - 20872525
Alignment:
Q  93 gaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgcattgttcatattaactgagctaagctcac 168  Q
    ||||||| ||||| ||  ||||||| || ||||||||||| |||||||| ||| | ||| |||||||||||||||||    
T  20872449 gaagtggggtgttcgggattcgaactccgacccctgcataaattatgcaatgtccctatcaactgagctaagctcac 20872525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 28436568 - 28436608
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcac 168  Q
    |||||||||||||||||| |||| || ||||||||||||||    
T  28436568 catatattatgcattgttgatatcaattgagctaagctcac 28436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 33445609 - 33445569
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  33445609 atatattatgcattgttcctaccaactgagctaagctcacg 33445569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 35103141 - 35103105
Alignment:
Q  133 attatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||  ||||||||||||||||||    
T  35103141 attatgcattgttcataccaactgagctaagctcacg 35103105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 38730521 - 38730625
Alignment:
Q  68 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaac-ccaacccctgcatatattatgca-ttgttcatattaactgagctaagct 165  Q
    |||||||| |||||||||||||| |||||||| |||| ||| |||  ||| || | |||||||||||  ||||| |||||| ||  |||||||| |||||    
T  38730521 ggagctcacatattttaaatgtggagaagtggggtgtctggggtttaaactccgatccctgcatataaaatgcatttgttcctaccaactgagcaaagct 38730620  T
Q  166 cacgg 170  Q
    |||||    
T  38730621 cacgg 38730625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 44019591 - 44019547
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||    
T  44019591 tgcatatattatgcattgttcttaccaactgagctaagttcacgg 44019547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 223696 - 223739
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  223696 tgcatatattatgcattgttcaaactaactgagctaagctcacg 223739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 40040 - 39997
Alignment:
Q  126 tgcatatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  40040 tgcatatattatgcattgtccataccaactgagctaagctcacg 39997  T

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Target: scaffold0072 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 25739 - 25696
Alignment:
Q  124 cctgcatatattatgcattgttcatattaactgagctaagctca 167  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||    
T  25739 cctgcatatattatgcattgttcttaccaactgagctaagctca 25696  T

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Target: scaffold0350 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 1288 - 1247
Alignment:
Q  128 catatattatgcattgttcatattaactgagctaagctcacg 169  Q
    ||||||||||||||||| ||||| |||||||||||| |||||    
T  1288 catatattatgcattgtccatatcaactgagctaagttcacg 1247  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 17764 - 17723
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacgg 170  Q
    |||||||||||||||| || || |||||||||||||||||||    
T  17764 atatattatgcattgtccaaatcaactgagctaagctcacgg 17723  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 5464 - 5424
Alignment:
Q  129 atatattatgcattgttcatattaactgagctaagctcacg 169  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  5464 atatattatgcattgttcttaccaactgagctaagctcacg 5424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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