View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1243_low_74 (Length: 295)
Name: NF1243_low_74
Description: NF1243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1243_low_74 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 64 - 295
Target Start/End: Original strand, 22065910 - 22066141
Alignment:
| Q |
64 |
attatgatatttagtttgtttccaagtcaagcttaagctatggtttctttggtttggtgcaaaaacagacattgtgatcaaatgcatatttagaaatggt |
163 |
Q |
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| T |
22065910 |
attatgatatttagtttgtttccaagtcaagcttaagctatgctttctttggtttggtgcaaaaacagacattgtgatcaaatgcatatttagaaatggt |
22066009 |
T |
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| Q |
164 |
tttccatgacataatgaattagcatgagggcctccattaatagaaagctaggatctcaagaatagtgttgagaatgatcttttgacgaagaatcacttct |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22066010 |
tttccatgacataatgaattagcatgagggcctccattaatagaaagctaggatctcaagaatagtgttgagaatgatcttttgacgaagaatcacttct |
22066109 |
T |
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| Q |
264 |
tccagaaaaatcaaatttaggcttcatttatt |
295 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
22066110 |
tccagaaaaatcaaatttaggcttcatttatt |
22066141 |
T |
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