View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12441_high_1 (Length: 1665)
Name: NF12441_high_1
Description: NF12441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12441_high_1 |
 | |
|
| [»] scaffold0039 (2 HSPs) |
| | |
|
| [»] scaffold0043 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 1545; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 1545; E-Value: 0
Query Start/End: Original strand, 20 - 1653
Target Start/End: Original strand, 24485668 - 24487303
Alignment:
| Q |
20 |
cctttgtagatatatgtgagactcgaattttaccaagttgaaccatctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaatac |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24485668 |
cctttgtagatatatgtgagactcgaattttaccaagttgaaccttctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaatac |
24485767 |
T |
|
| Q |
120 |
cggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggtgtttgatgtggtactccaagttcactcaaaagatttaatagccacatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24485768 |
cggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggtgtttgatgcggtactccaagttcactcaaaagatttaatagccacatg |
24485867 |
T |
|
| Q |
220 |
atttcagctgaagtattggcagcagacctgtattctgcctctgtggatgatctagcaactgttctctgtctttttgataaccatgaaacaggattactgc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24485868 |
atttcagctgaagtattggcagcagacctgtattctgcctctgtggatgatctagcaattgttctctgtctttttgataaccatgaaacaggattaccgc |
24485967 |
T |
|
| Q |
320 |
caaagtaaattatgcaagctgatgtagatgttttgtcatcatgattacctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttgc |
419 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
24485968 |
caaagtaaattatgtaagctgatgtagatgttttgtcatcatgattacctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttcc |
24486067 |
T |
|
| Q |
420 |
aagcttcaaaccatggttaatagtaagtttgagatatcttaccactcgtttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaat |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24486068 |
aagcttcaaaccatggttaatagtaagtttgagatatcttaccactcgtttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaat |
24486167 |
T |
|
| Q |
520 |
ttatttattgcaaatgagagatctggcctggttaaagtgatgtactgcagtgcaccaatcatactacgaaacatcttggaatcagcagcggcagatccat |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24486168 |
ttatttattgcaaatgagagatctggcctggttaaagtgatgtactgcagtgcaccaatcatactacgaaacatcttggaatcagcagcggcagatccat |
24486267 |
T |
|
| Q |
620 |
cattcagcttgagaggagtagtcatacataatggagtgttgaccgacttagcccctgacatgttgaacttttccaaaagttctctaatataatcatgctg |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24486268 |
cattcagcttgagaggagtagtcatacataatggagtgttgaccgacttagcccctgacatgttgaacttttccaaaagttctctaatataaccatgctg |
24486367 |
T |
|
| Q |
720 |
agataataagagaccatacttggttggaattagttcaattctaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtc |
819 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24486368 |
agataataagagaccatacttggttggaattagttcaattccaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtc |
24486467 |
T |
|
| Q |
820 |
atgaattgttgtaaaaatgtagtgctgctacctgttaaaagtaaatcatcaacatatactaacaagaaggcctgcacaccgtgtttgttgtaaataaaca |
919 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24486468 |
atgaattgttgtaaaaatgtagtgctgctacctgtgaaaagtaaatcatcaacatatactaacaagaaggcctgcacaccgtgtttgttgtaaataaaca |
24486567 |
T |
|
| Q |
920 |
aagatggatcacttaggcttgtacaaaacccaacagagagaacgaatgccttgaaagaatcatgccacgcgcgaggtgtttgtctcaaaccatatatagc |
1019 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24486568 |
aagatggatcacttaggcttgtacaaaacccaacagagagaacgaatgccttgagagaatcatgccacgcgcgaggtgcttgtctcaaaccatatatagc |
24486667 |
T |
|
| Q |
1020 |
tttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacattttcagttaattttccttgtaaaaaggca |
1119 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24486668 |
tttcttaagcttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacatcttcagttaattttccttgtaaaaaggca |
24486767 |
T |
|
| Q |
1120 |
ttattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgcaaaagtttcct |
1219 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24486768 |
ttattgacatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgcaaaagtttcct |
24486867 |
T |
|
| Q |
1220 |
taaaatcaaggcctggtg--tgagtgaaccctttggcaaccaaccttgccttgtaccgtgacacacttccatccggatttcttttaattcgaaacaacca |
1317 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24486868 |
taaaatcaaggcctggtgtttgagtgaaccctttggcaaccaaccttgccttgtaccgtgacacacttccatccggatttcttttaatccgaaacaacca |
24486967 |
T |
|
| Q |
1318 |
tttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccattgttcataagtgcgttaaattctgcagaacaagcatctctccaa |
1417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24486968 |
tttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccattgttcataagtgcgttaaattctgcagaactagcatctctccaa |
24487067 |
T |
|
| Q |
1418 |
tgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatcatgtttagtaacaacaaacattttcttgggtttgaaaatattat |
1517 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24487068 |
tgtggtattttaagtgcttgagtaatagtggatggctcaagattttcttgcaaatcatgtttagtaacaacaaacattttcttgggtttgaaaatattat |
24487167 |
T |
|
| Q |
1518 |
gttgtgaccttgtcactataggatcacgctgtaccggtttattggattgtagacttggaacctgatttggtacagagttggtggtggaacttggtgaatt |
1617 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24487168 |
gttgtgaccttgtcactataggatcacgttgtactggtttattggattgtagacttggaacctgatttggtacagagttggtggtggaactaggtgaatt |
24487267 |
T |
|
| Q |
1618 |
atcactaatcactggtatccctatagacacaggttc |
1653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
24487268 |
atcactaatcactggtatccctatagacacaggttc |
24487303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 1537; E-Value: 0
Query Start/End: Original strand, 20 - 1653
Target Start/End: Original strand, 24494002 - 24495637
Alignment:
| Q |
20 |
cctttgtagatatatgtgagactcgaattttaccaagttgaaccatctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaatac |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24494002 |
cctttgtagatatatgtgagactcgaattttaccaagttgaaccttctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaatac |
24494101 |
T |
|
| Q |
120 |
cggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggtgtttgatgtggtactccaagttcactcaaaagatttaatagccacatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24494102 |
cggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggtgtttgatgcggtactccaagttcactcaaaagatttaatagccacatg |
24494201 |
T |
|
| Q |
220 |
atttcagctgaagtattggcagcagacctgtattctgcctctgtggatgatctagcaactgttctctgtctttttgataaccatgaaacaggattactgc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24494202 |
atttcagctgaagtattggcagcagacctgtattctgcctctgtggatgatctagcaattgttctctgtctttttgataaccatgaaacaggattaccgc |
24494301 |
T |
|
| Q |
320 |
caaagtaaattatgcaagctgatgtagatgttttgtcatcatgattacctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttgc |
419 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
24494302 |
caaagtaaattatgtaagctgatgtagatgttttgtcatcatgattacctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttcc |
24494401 |
T |
|
| Q |
420 |
aagcttcaaaccatggttaatagtaagtttgagatatcttaccactcgtttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaat |
519 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24494402 |
aagcttcaaaccatggttaatagtaagtttgagatatcttaccactcttttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaat |
24494501 |
T |
|
| Q |
520 |
ttatttattgcaaatgagagatctggcctggttaaagtgatgtactgcagtgcaccaatcatactacgaaacatcttggaatcagcagcggcagatccat |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24494502 |
ttatttattgcaaatgagagatctggcctggttaaagtgatgtactgcagtgcaccaatcatactacgaaacatcttggaatcagcagcgtcagatccat |
24494601 |
T |
|
| Q |
620 |
cattcagcttgagaggagtagtcatacataatggagtgttgaccgacttagcccctgacatgttgaacttttccaaaagttctctaatataatcatgctg |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24494602 |
cattcagcttgagaggagtagtcatacataatggagtgttgaccgacttagcccctgacatgttgaacttttccaaaagttctctaatataaccatgctg |
24494701 |
T |
|
| Q |
720 |
agataataagagaccatacttggttggaattagttcaattctaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtc |
819 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24494702 |
agataataagagaccatacttggttggaattagttcaattccaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtc |
24494801 |
T |
|
| Q |
820 |
atgaattgttgtaaaaatgtagtgctgctacctgttaaaagtaaatcatcaacatatactaacaagaaggcctgcacaccgtgtttgttgtaaataaaca |
919 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24494802 |
atgaattgttgtaaaaatgtagtgctgctacctgttaaaagtaaatcatcaacatatactaacaagaaggcctgcacaccgtgtttgttgtaaataaaca |
24494901 |
T |
|
| Q |
920 |
aagatggatcacttaggcttgtacaaaacccaacagagagaacgaatgccttgaaagaatcatgccacgcgcgaggtgtttgtctcaaaccatatatagc |
1019 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24494902 |
aagatggatcacttaggcttgtacaaaacccaacatagagaacgaatgccttgagagaatcatgccacgcgcgaggtgcttgtctcaaaccatatatagc |
24495001 |
T |
|
| Q |
1020 |
tttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacattttcagttaattttccttgtaaaaaggca |
1119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24495002 |
tttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacatcttcagttaattttccttgtaaaaaggca |
24495101 |
T |
|
| Q |
1120 |
ttattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgcaaaagtttcct |
1219 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24495102 |
ttattgacatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgcaaaagtttcct |
24495201 |
T |
|
| Q |
1220 |
taaaatcaaggcctggtg--tgagtgaaccctttggcaaccaaccttgccttgtaccgtgacacacttccatccggatttcttttaattcgaaacaacca |
1317 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
24495202 |
taaaatcaaggcctggtgtttgagtgaaccctttggcaaccaaccttgccttgtaccgtgacacacttccatccggatttcttttaatccgaaacaacca |
24495301 |
T |
|
| Q |
1318 |
tttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccattgttcataagtgcgttaaattctgcagaacaagcatctctccaa |
1417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24495302 |
tttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccattgttcataagtgcgttaaattctgcagaactagcatctctccaa |
24495401 |
T |
|
| Q |
1418 |
tgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatcatgtttagtaacaacaaacattttcttgggtttgaaaatattat |
1517 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24495402 |
tgtggtattttaagtgcttgagtaatagtggatggctcaagattttcttgcaaatcatgtttagtaactacaaacattttcttgggtttgaaaatattat |
24495501 |
T |
|
| Q |
1518 |
gttgtgaccttgtcactataggatcacgctgtaccggtttattggattgtagacttggaacctgatttggtacagagttggtggtggaacttggtgaatt |
1617 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24495502 |
gttgtgaccttgtcactataggatcacgttgtactggtttattggattgtagacttggaacctgatttggtacagagttggtggtggaactaggtgaatt |
24495601 |
T |
|
| Q |
1618 |
atcactaatcactggtatccctatagacacaggttc |
1653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
24495602 |
atcactaatcactggtatccctatagacacaggttc |
24495637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 834; Significance: 0; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 834; E-Value: 0
Query Start/End: Original strand, 20 - 889
Target Start/End: Complemental strand, 34296357 - 34295488
Alignment:
| Q |
20 |
cctttgtagatatatgtgagactcgaattttaccaagttgaaccatctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaatac |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34296357 |
cctttgtagatatatgtgagactcgaattttaccaagttgaaccatctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaatac |
34296258 |
T |
|
| Q |
120 |
cggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggtgtttgatgtggtactccaagttcactcaaaagatttaatagccacatg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34296257 |
cggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggtgtttgatgcggtactccaagttcactcaaaagatttaatagccacatg |
34296158 |
T |
|
| Q |
220 |
atttcagctgaagtattggcagcagacctgtattctgcctctgtggatgatctagcaactgttctctgtctttttgataaccatgaaacaggattactgc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
34296157 |
atttcagctgaagtattggcagcagacctgtattctgcctctgtggatgatctagcaattgttctctgtctttttgataaccatgaaacaggattaccgc |
34296058 |
T |
|
| Q |
320 |
caaagtaaattatgcaagctgatgtagatgttttgtcatcatgattacctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttgc |
419 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
34296057 |
caaagtaaattatgtaagctgatgtagatgttttgtcatcatgattacctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttcc |
34295958 |
T |
|
| Q |
420 |
aagcttcaaaccatggttaatagtaagtttgagatatcttaccactcgtttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaat |
519 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34295957 |
aagcttcaaaccatggttaatagtaagtttgagatatcttaccactcatttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaat |
34295858 |
T |
|
| Q |
520 |
ttatttattgcaaatgagagatctggcctggttaaagtgatgtactgcagtgcaccaatcatactacgaaacatcttggaatcagcagcggcagatccat |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
34295857 |
ttatttattgcaaatgagagatctggcctggttaaagtgatgtactgcagtgcaccaatcatactacgaaacatcttggaatcagcagcgacagatccat |
34295758 |
T |
|
| Q |
620 |
cattcagcttgagaggagtagtcatacataatggagtgttgaccgacttagcccctgacatgttgaacttttccaaaagttctctaatataatcatgctg |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34295757 |
cattcagcttgagaggagtagtcatacataatggagtgttgaccgacttagcccctgacatgttgaacttttccaaaagttctctaatataaccatgctg |
34295658 |
T |
|
| Q |
720 |
agataataagagaccatacttggttggaattagttcaattctaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtc |
819 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34295657 |
agataataagagaccatacttggttggaattagttcaattccaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtc |
34295558 |
T |
|
| Q |
820 |
atgaattgttgtaaaaatgtagtgctgctacctgttaaaagtaaatcatcaacatatactaacaagaagg |
889 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34295557 |
atgaattgttgtaaaaatgtagtgctgctacctgttaaaagtaaatcatcaacatatactaacaagaagg |
34295488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 713; E-Value: 0
Query Start/End: Original strand, 884 - 1653
Target Start/End: Complemental strand, 34293352 - 34292581
Alignment:
| Q |
884 |
agaaggcctgcacaccgtgtttgttgtaaataaacaaagatggatcacttaggcttgtacaaaacccaacagagagaacgaatgccttgaaagaatcatg |
983 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
34293352 |
agaaggcctgcacaccgtgtttgttgtaaataaacaaagatggatcacttaggcttgtacaaaacccaacaaagagaacgaatgccttgagagaatcatg |
34293253 |
T |
|
| Q |
984 |
ccacgcgcgaggtgtttgtctcaaaccatatatagctttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatg |
1083 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34293252 |
ccacgcgcgaggtgcttgtctcaaaccatatatagctttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatg |
34293153 |
T |
|
| Q |
1084 |
tagacattttcagttaattttccttgtaaaaaggcattattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaa |
1183 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34293152 |
tagacatcttcagttaattttccttgtaaaaaggcattattgacatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaa |
34293053 |
T |
|
| Q |
1184 |
tggtttgaggtttcacaactggtgcaaaagtttccttaaaatcaaggcctggtgt--gagtgaaccctttggcaaccaaccttgccttgtaccgtgacac |
1281 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34293052 |
tggtttgaggtttcacaactggtgcaaaagtttccttaaaatcaaggcctggtgtttgagtgaaccctttggcaaccaaccttgccttgtaccgtgacac |
34292953 |
T |
|
| Q |
1282 |
acttccatccggatttcttttaattcgaaacaaccatttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccattgttcata |
1381 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34292952 |
acttccatccggatttcttttaatccgaaacaaccatttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccattgttcata |
34292853 |
T |
|
| Q |
1382 |
agtgcgttaaattctgcagaacaagcatctctccaatgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatcatgtttag |
1481 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
34292852 |
agtgcgttaaattctgcagaactagcatctctccaatgtggtattttaagtgcttgagtaatagtggatggctcaagattttcttgcaaatcatgtttag |
34292753 |
T |
|
| Q |
1482 |
taacaacaaacattttcttgggtttgaaaatattatgttgtgaccttgtcactataggatcacgctgtaccggtttattggattgtagacttggaacctg |
1581 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34292752 |
taaccacaaacattttcttgggtttgaaaatattatgttgtgaccttgtcactataggatcacgttgtactggtttattggattgtagacttggaacctg |
34292653 |
T |
|
| Q |
1582 |
atttggtacagagttggtggtggaacttggtgaattatcactaatcactggtatccctatagacacaggttc |
1653 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34292652 |
atttggtacagagttggtggtggaactaggtgaattatcactaatcactggtatccctatagacacaggttc |
34292581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 713 - 1340
Target Start/End: Complemental strand, 31347057 - 31346428
Alignment:
| Q |
713 |
catgctgagataataagagaccatacttggttggaattagttcaattctaaggaaataatgagggaagccaagttgtttgagagagaacttagtggaaag |
812 |
Q |
| |
|
|||||||||| ||||| | ||| | |||||| ||||||| |||||||| |||||| || ||||| || |||||| |||| ||||| |||||| |||| || |
|
|
| T |
31347057 |
catgctgagacaataataaaccttccttggtaggaattaattcaattccaaggaagtagtgaggaaatccaagtagttttagagaaaacttattggagag |
31346958 |
T |
|
| Q |
813 |
ctctgtcatgaattgttgtaaaaatgtagtgctgctacctgttaaaagtaaatcatcaacatatactaacaagaaggcctgcacaccgtgtttgttgtaa |
912 |
Q |
| |
|
||| |||| ||||| | || ||| || |||| | ||||||| || | |||||||||||| |||| |||||| || ||||| || | | | ||||| |
|
|
| T |
31346957 |
ttctttcataaattgatttagaaagataacgctgttgcctgttagtagaagatcatcaacataaactagcaagaatgcttgcaccccttctctattgtag |
31346858 |
T |
|
| Q |
913 |
ataaacaaagatggatcacttaggcttgtacaaaacccaacagagagaacgaatgccttgaaagaatcatgccacgcgcgaggtgtttgtctcaaaccat |
1012 |
Q |
| |
|
|| ||||| || | |||||| || ||||| | || || ||| | ||| ||||| |||| |||||||||||| || | |||| |||||| | ||||| |
|
|
| T |
31346857 |
atgaacaaggaggaatcactgagacttgttgagaaaccgtaagaaacaacaaatgctttgagagaatcatgccaagccctcggtgcttgtcttagaccat |
31346758 |
T |
|
| Q |
1013 |
atatagc-tttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacattttcagttaattttccttgta |
1111 |
Q |
| |
|
| || || |||| || | ||||||||||| |||| |||| |||| || || || || |||||||| || |||| ||||||||| || ||||| | |
|
|
| T |
31346757 |
agattgcctttcgta-gcttgcaaacatgggttggatattcaatatgaacaaaaccagggggctgctgcatatacacatcttcagttaaattaccttgca |
31346659 |
T |
|
| Q |
1112 |
aaaaggcattattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgcaaa |
1211 |
Q |
| |
|
||| || ||||||| |||||| ||||||| ||||| || || ||||| ||||| ||||| ||||| || ||||| ||||| ||||| || || || |
|
|
| T |
31346658 |
gaaaagcgttattgacatccatttgatgtagtgaccacccacgatttagtgccaaagttagaacaactttgattgtttgtggtttaacaacaggagcgaa |
31346559 |
T |
|
| Q |
1212 |
agtttccttaaaatcaaggcctggtgt--gagtgaaccctttggcaaccaaccttgccttgtaccgtgacacacttccatccggatttcttttaattcga |
1309 |
Q |
| |
|
||||| ||||||||||| || || || |||| |||||||| || ||||| ||||| ||||| | | ||||||||||| ||||| ||||| |||| | |
|
|
| T |
31346558 |
cgtttctttaaaatcaagaccaggagtttgagtaaaccctttagcgaccaatcttgctttgtatctagctacacttccatctggattcctttttattcta |
31346459 |
T |
|
| Q |
1310 |
aacaaccatttacagccaactacatttgtat |
1340 |
Q |
| |
|
|| ||||||||||| ||| ||| |||||||| |
|
|
| T |
31346458 |
aataaccatttacaaccatctagatttgtat |
31346428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 31347697 - 31347599
Alignment:
| Q |
73 |
acaaaatgataatcaagtgcaatatgcttcattctagagtgaaataccggattggaacataagtaagtggtgccaatattgtcacaaaaaagagtaggt |
171 |
Q |
| |
|
||||| |||||||| | ||||| || |||||||| || |||||||| |||| ||||||| |||||| ||||||||||| |||||||| || |||||| |
|
|
| T |
31347697 |
acaaagtgataatccatggcaatgtgtttcattcttgaatgaaatacgagattagaacataggtaagttgtgccaatattatcacaaaatagtgtaggt |
31347599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 230; Significance: 1e-126; HSPs: 2)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 66 - 826
Target Start/End: Original strand, 58162 - 58922
Alignment:
| Q |
66 |
ctgcctcacaaaatgataatcaagtgcaatatgcttcattctagagtgaaataccggattggaacataagtaagtggtgccaatattgtcacaaaaaaga |
165 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| ||| || ||||| ||||| |||||||||||||| |||||||| |
|
|
| T |
58162 |
ctgcctcacaaagtgataatcaagtgcaatgtgcttcattcttgagtgaaagaccgaattagagcataaataagttgtgccaatattgtcgcaaaaaagt |
58261 |
T |
|
| Q |
166 |
gtaggtgtttgatgtggtactccaagttcactcaaaagatttaatagccacatgatttcagctgaagtattggcagcagacctgtattctgcctctgtgg |
265 |
Q |
| |
|
||||| ||||| ||| || |||||||| | |||||||||| | |||||||| ||||| ||||||| |||| ||||||||| |||||||| ||| ||| |
|
|
| T |
58262 |
gtaggaatttgagatggaacaccaagttctcccaaaagatttgagagccacataatttctgctgaagcgttggtagcagacctatattctgcttctatgg |
58361 |
T |
|
| Q |
266 |
atgatctagcaactgttctctgtctttttgataaccatgaaacaggattactgccaaagtaaattatgcaagctgatgtagatgttttgtcatcatgatt |
365 |
Q |
| |
|
|||||| ||||||||||| || ||||||| |||||||| ||||||||| || || ||||||| | | ||||| || |||||||||||||||| ||| |
|
|
| T |
58362 |
atgatcgcgcaactgttctttgcgtttttgacaaccatgagacaggattatcaccgaaataaattaggtaggctgaagttgatgttttgtcatcataatt |
58461 |
T |
|
| Q |
366 |
acctccccagtcagcatcagtaaaggcatgcaatttgagatgaggtggttttgcaagcttcaaaccatggttaatagtaagtttgagatatcttaccact |
465 |
Q |
| |
|
||| ||||| | |||||||||| | || || ||||| |||||| || |||| ||| || ||||||||||| || || | || | ||| |||| |||| |
|
|
| T |
58462 |
accaccccaattagcatcagtatatgcttgtaatttaagatgaacaggctttgtaagtttgaaaccatggttgattgtgaacttcaaataccttaacact |
58561 |
T |
|
| Q |
466 |
cgtttgagttgctgaaagtgcatttcagttggttgatgcataaattgtgacaatttatttattgcaaatgagagatctggcctggttaaagtgatgtact |
565 |
Q |
| |
|
| ||||||| |||| || |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||| |||||||| | |
|
|
| T |
58562 |
cttttgagtcgctggaaatgcacttcagttggttgatgcataaattgcgacaatttgtttattgcaaatgagagatcaggcctagttaatgtgatgtatt |
58661 |
T |
|
| Q |
566 |
gcagtgcaccaatcatactacgaaacatcttggaatcagcagcggcagatccatcattcagcttgagaggagtagtcatacataatggag-tgttgaccg |
664 |
Q |
| |
|
| ||||| ||||| || ||||||||||| || |||||||||| ||| || |||||||| || ||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
58662 |
gaagtgctccaataatgctacgaaacatttttgaatcagcaggggctgaaccatcatttagtttgagaggagtagtcatgcacaatggagttgttg-ttg |
58760 |
T |
|
| Q |
665 |
acttagcccctgacatgttgaacttttccaaaagttctctaatataatcatgctgagataataagagaccatacttggttggaattagttcaattctaag |
764 |
Q |
| |
|
|||||||||||||| ||||||| ||||| | |||||| || ||| |||| || ||||||| | |||| | || ||||||| | ||| || | ||| |
|
|
| T |
58761 |
ctttagcccctgacatattgaactcatccaataattctctgatgtaaccatgttgtgataatagcataccagattttattggaataaattctatgccaag |
58860 |
T |
|
| Q |
765 |
gaaataatgagggaagccaagttgtttgagagagaacttagtggaaagctctgtcatgaatt |
826 |
Q |
| |
|
|| |||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||| |
|
|
| T |
58861 |
aaagtaatgaggaaatccaagttgtttgagagaaaactttgttgaaagttctgtcatgaatt |
58922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039; HSP #2
Raw Score: 185; E-Value: 2e-99
Query Start/End: Original strand, 976 - 1545
Target Start/End: Original strand, 59037 - 59608
Alignment:
| Q |
976 |
gaatcatgccacgcgcgaggtgtttgtctcaaaccatatatagctttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggtt |
1075 |
Q |
| |
|
||||||||||| || ||||||| || | ||||||||| || |||||||| || || |||| ||| || |||| |||||| || || || ||||| || | |
|
|
| T |
59037 |
gaatcatgccatgcacgaggtgcctgccacaaaccataaattgctttcttgagcttacaaatatgatgaggaaattcagaatggataaaacctgggggct |
59136 |
T |
|
| Q |
1076 |
gctgcatgtagacattttcagttaattttccttgtaaaaaggcattattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaac |
1175 |
Q |
| |
|
||||||| || |||| ||||| |||||||||||| || |||||||| || | |||||| |||||||||| ||| || || || ||||||| |||||| || |
|
|
| T |
59137 |
gctgcatatacacatcttcagataattttccttgcaagaaggcattgttaacatccatttgatgtaaagtccacccatgtccgagtgctatagtgaggac |
59236 |
T |
|
| Q |
1176 |
cactttaatggtttgaggtttcacaactggtgcaaaagtttccttaaaatcaaggcctggtgt--gagtgaaccctttggcaaccaaccttgccttgtac |
1273 |
Q |
| |
|
|||||||| ||||||||||| ||||| || ||||| |||||||| |||||||| || || || ||||||| ||||| ||||||||||| || || || |
|
|
| T |
59237 |
aactttaattgtttgaggttttacaaccggagcaaatgtttccttgaaatcaagacccggagtttgagtgaatccttttgcaaccaacctagctttatat |
59336 |
T |
|
| Q |
1274 |
cgtgacacacttccatccggatttcttttaattcgaaacaaccatttacagccaactacatttgtatgagctagacgaggtaccaaggtccaagtaccat |
1373 |
Q |
| |
|
|||| ||||||||||| || ||||||||||||| ||||||||||| ||||| |||| ||| ||||| | | | || || ||||||||||||||||||| |
|
|
| T |
59337 |
cgtgctacacttccatctgggtttcttttaattcagaacaaccatttgcagcctactaaattggtatgtgtttgtcgtggcaccaaggtccaagtaccat |
59436 |
T |
|
| Q |
1374 |
tgttcataagtgcgttaaattctgcagaacaagcatctctccaatgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatc |
1473 |
Q |
| |
|
| ||||| ||||| |||||||| || || ||||||||||||| ||||| |||||||| |||||||| ||| | ||||| |||||||||||||||||||| |
|
|
| T |
59437 |
tattcatcagtgcattaaattcagccgagcaagcatctctccgatgtgcaattttaagagcttgagttatagtagatggttcaagattttcttgcaaatc |
59536 |
T |
|
| Q |
1474 |
atgtttagtaacaacaaacattttcttgggtttgaaaatattatgttgtgaccttgtcactataggatcacg |
1545 |
Q |
| |
|
||||||||| | ||| |||||||| ||||||||||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
59537 |
atgtttagtggctgaaaatattttcttcggtttgaaaatattatgatgagaccttgtcacaataggatcacg |
59608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 59; Significance: 3e-24; HSPs: 2)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 978 - 1228
Target Start/End: Original strand, 81833 - 82083
Alignment:
| Q |
978 |
atcatgccacgcgcgaggtgtttgtctcaaaccatatatagctttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgc |
1077 |
Q |
| |
|
||||||||| || ||||| || || || || ||||||||||| ||||| |||||||||||||| | |||| |||||| |||||||| || || ||||| |
|
|
| T |
81833 |
atcatgccatgctcgaggagtctgccttaatccatatatagccttcttgagtttgcaaacatgattaggaaattcagaatgaatgaaaccaggtggttgt |
81932 |
T |
|
| Q |
1078 |
tgcatgtagacattttcagttaattttccttgtaaaaaggcattattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaacca |
1177 |
Q |
| |
|
| |||| | |||||||| || | || ||||| | ||||||||| |||| ||||| ||||| | ||||| || | | |||||||||||||| |||| |
|
|
| T |
81933 |
tccatgaaaacattttccgtgagattaccttgaagaaaggcattgttgacatccaattgatgcatggaccaaccataagtaagtgctaaagtgatgacca |
82032 |
T |
|
| Q |
1178 |
ctttaatggtttgaggtttcacaactggtgcaaaagtttccttaaaatcaa |
1228 |
Q |
| |
|
| ||||| ||||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
82033 |
ccttaatagtttgaggtttgacaacaggggcaaatgtttccttaaaatcaa |
82083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1412 - 1527
Target Start/End: Original strand, 82269 - 82384
Alignment:
| Q |
1412 |
ctccaatgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatcatgtttagtaacaacaaacattttcttgggtttgaaaa |
1511 |
Q |
| |
|
|||||||| || ||||| |||||||| || | | ||||||| ||||||||||| || | ||||||||||| | | ||| | |||||||||||| |||| |
|
|
| T |
82269 |
ctccaatgaggaatttttagtgcttgtgtcacagtggatggttcaagattttcatgtagctcatgtttagtgatagtaaataatttcttgggtttaaaaa |
82368 |
T |
|
| Q |
1512 |
tattatgttgtgacct |
1527 |
Q |
| |
|
|||||| ||| ||||| |
|
|
| T |
82369 |
tattattttgggacct |
82384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 56; Significance: 2e-22; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1009 - 1228
Target Start/End: Original strand, 32323656 - 32323875
Alignment:
| Q |
1009 |
ccatatatagctttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacattttcagttaattttcctt |
1108 |
Q |
| |
|
||||||||||| ||||| |||||||||||||| | |||| |||||| |||||||| || || ||||| | |||| | |||||||| || | || |||| |
|
|
| T |
32323656 |
ccatatatagccttcttgagtttgcaaacatgattaggaaattcagaatgaatgaaaccaggtggttgttccatgaaaacattttcggtgagattacctt |
32323755 |
T |
|
| Q |
1109 |
gtaaaaaggcattattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgc |
1208 |
Q |
| |
|
| | ||||||||| |||| ||||| ||||| | ||||| || | | |||||||||||||| ||||| ||||| ||||||||||| ||||| || || |
|
|
| T |
32323756 |
gaagaaaggcattgttgacatccaattgatgcatggaccaaccataagtaagtgctaaagtgatgaccaccttaatagtttgaggtttgacaacaggggc |
32323855 |
T |
|
| Q |
1209 |
aaaagtttccttaaaatcaa |
1228 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
32323856 |
aaatgtttccttaaaatcaa |
32323875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1412 - 1527
Target Start/End: Original strand, 32324061 - 32324176
Alignment:
| Q |
1412 |
ctccaatgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatcatgtttagtaacaacaaacattttcttgggtttgaaaa |
1511 |
Q |
| |
|
|||||||| || ||||| |||||||| || | | ||||||| ||||||||||| || | ||||||||||| | | ||| | |||||||||||| |||| |
|
|
| T |
32324061 |
ctccaatgaggaatttttagtgcttgtgtcacagtggatggttcaagattttcatgtagctcatgtttagtgatagtaaataatttcttgggtttaaaaa |
32324160 |
T |
|
| Q |
1512 |
tattatgttgtgacct |
1527 |
Q |
| |
|
|||||| ||| ||||| |
|
|
| T |
32324161 |
tattattttgggacct |
32324176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 4e-20; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1009 - 1228
Target Start/End: Original strand, 18728692 - 18728911
Alignment:
| Q |
1009 |
ccatatatagctttcttaagtttgcaaacatgttgtggaagttcagagtgaatgaaccctggcggttgctgcatgtagacattttcagttaattttcctt |
1108 |
Q |
| |
|
||||||||||| ||||| |||||||||||||| | |||| |||||| |||||||| || || ||||| | |||| | |||||||| || | || |||| |
|
|
| T |
18728692 |
ccatatatagccttcttgagtttgcaaacatgattaggaaattcagaatgaatgaaaccaggtggttgttccatgaaaacattttccgtgagattacctt |
18728791 |
T |
|
| Q |
1109 |
gtaaaaaggcattattgatatccatctgatgtaaagaccatccttgaccaagtgctaaagtgagaaccactttaatggtttgaggtttcacaactggtgc |
1208 |
Q |
| |
|
| | ||||||||| |||| ||||| ||||| | ||||| || | | |||||||||||||| ||||| ||||| ||||||||||| ||||| || | |
|
|
| T |
18728792 |
gaagaaaggcattgttgacatccaattgatgcatggaccaaccataagtaagtgctaaagtgatgaccaccttaatagtttgaggtttgacaacagggac |
18728891 |
T |
|
| Q |
1209 |
aaaagtttccttaaaatcaa |
1228 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
18728892 |
aaatgtttccttaaaatcaa |
18728911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1390 - 1527
Target Start/End: Original strand, 18729075 - 18729212
Alignment:
| Q |
1390 |
aaattctgcagaacaagcatctctccaatgtggtattttaagtgcttgagtaatattggatggctcaagattttcttgcaaatcatgtttagtaacaaca |
1489 |
Q |
| |
|
||||||| ||||||| || | |||||||| || ||||| |||||||| || | | ||||||| |||||||||||||| | |||||||| || ||| | |
|
|
| T |
18729075 |
aaattcttcagaacatgccttcctccaatgaggaattttgagtgcttgtgtcacagtggatggttcaagattttcttgtagctcatgtttggtgacagta |
18729174 |
T |
|
| Q |
1490 |
aacattttcttgggtttgaaaatattatgttgtgacct |
1527 |
Q |
| |
|
|| | |||||||||||| |||||||||| ||| ||||| |
|
|
| T |
18729175 |
aataatttcttgggtttaaaaatattattttgagacct |
18729212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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