View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12441_low_20 (Length: 233)
Name: NF12441_low_20
Description: NF12441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12441_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 25010767 - 25010546
Alignment:
| Q |
1 |
agattatacaatagttacttttataatcaaaaacatttaatggagtgtataacactcttcttaaacagtttttccctctagaaccacttgttatcaagac |
100 |
Q |
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| T |
25010767 |
agattatacaatagttacttttataatcaaaaacatttaatggagtgtataacactcttcttaaacagtttttccctctagaaccacttgttatcaagac |
25010668 |
T |
|
| Q |
101 |
cgtaaaaacaaattcatcagaaaagaacgttgtaaggtatcaaagagcaaacgagtagaacggccaacgattagattacactgaaagtgataaagaaagg |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
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| T |
25010667 |
cgtaaaaacaaattcatcagaaaagaacattgtaaggtatcaaagagcaaacgagtagaacggccaacgattagattacactcaaagtaataaagaaagg |
25010568 |
T |
|
| Q |
201 |
gtatgcccgaggccacaggttc |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
25010567 |
gtatgcccgaggccacaggttc |
25010546 |
T |
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