View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12445_low_13 (Length: 217)

Name: NF12445_low_13
Description: NF12445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12445_low_13
NF12445_low_13
[»] chr7 (30 HSPs)
chr7 (1-119)||(13882686-13882804)
chr7 (5-122)||(859153-859270)
chr7 (5-122)||(1217157-1217274)
chr7 (17-119)||(13886159-13886261)
chr7 (6-113)||(1220446-1220553)
chr7 (120-199)||(7632748-7632827)
chr7 (1-62)||(13886245-13886306)
chr7 (34-121)||(4888684-4888770)
chr7 (30-97)||(27309636-27309704)
chr7 (53-127)||(29175780-29175854)
chr7 (30-109)||(1786683-1786763)
chr7 (30-121)||(7803029-7803120)
chr7 (33-95)||(5934607-5934670)
chr7 (30-95)||(11000849-11000915)
chr7 (30-87)||(24840143-24840201)
chr7 (30-95)||(1365672-1365737)
chr7 (34-95)||(30217819-30217879)
chr7 (30-85)||(27142666-27142722)
chr7 (30-120)||(1369805-1369894)
chr7 (30-119)||(1874538-1874627)
chr7 (30-92)||(3778735-3778797)
chr7 (34-87)||(1753629-1753683)
chr7 (30-95)||(1883489-1883555)
chr7 (30-94)||(11228981-11229046)
chr7 (34-109)||(4133284-4133359)
chr7 (30-92)||(6451776-6451839)
chr7 (37-79)||(8063843-8063885)
chr7 (30-95)||(11228721-11228787)
chr7 (154-199)||(7639478-7639523)
chr7 (33-95)||(29974278-29974342)
[»] chr6 (15 HSPs)
chr6 (1-119)||(3536005-3536123)
chr6 (1-119)||(3542216-3542334)
chr6 (1-119)||(30049887-30050005)
chr6 (5-115)||(29340810-29340920)
chr6 (1-119)||(30052174-30052292)
chr6 (30-120)||(33615503-33615593)
chr6 (30-119)||(27822118-27822207)
chr6 (67-120)||(29342061-29342114)
chr6 (34-98)||(11658936-11659000)
chr6 (37-109)||(18727115-18727186)
chr6 (34-95)||(1127258-1127320)
chr6 (30-95)||(14238436-14238502)
chr6 (35-72)||(8049012-8049049)
chr6 (30-66)||(12882123-12882159)
chr6 (36-95)||(33215186-33215246)
[»] chr8 (26 HSPs)
chr8 (1-119)||(22921850-22921968)
chr8 (1-119)||(6845307-6845425)
chr8 (1-119)||(22926648-22926766)
chr8 (1-119)||(42891664-42891782)
chr8 (1-119)||(22512046-22512164)
chr8 (1-119)||(22519346-22519464)
chr8 (1-111)||(23570555-23570665)
chr8 (1-120)||(37189837-37189956)
chr8 (1-119)||(22520799-22520917)
chr8 (1-95)||(42890363-42890457)
chr8 (1-79)||(23573554-23573632)
chr8 (30-119)||(2189722-2189810)
chr8 (30-119)||(18468649-18468737)
chr8 (34-120)||(24731231-24731317)
chr8 (30-95)||(2687742-2687808)
chr8 (30-98)||(16598249-16598318)
chr8 (33-119)||(24731035-24731121)
chr8 (30-95)||(26374900-26374965)
chr8 (30-67)||(2609547-2609584)
chr8 (30-109)||(14130165-14130244)
chr8 (60-120)||(26378031-26378090)
chr8 (1-32)||(18180770-18180801)
chr8 (30-96)||(24578799-24578866)
chr8 (30-67)||(2689146-2689183)
chr8 (30-67)||(20693799-20693836)
chr8 (57-119)||(23573639-23573702)
[»] chr3 (13 HSPs)
chr3 (1-119)||(43306672-43306790)
chr3 (1-120)||(43303959-43304078)
chr3 (1-119)||(5128880-5128998)
chr3 (1-119)||(3063737-3063855)
chr3 (1-119)||(3068875-3068993)
chr3 (30-120)||(2472688-2472777)
chr3 (30-109)||(52708844-52708923)
chr3 (37-100)||(45168338-45168401)
chr3 (30-120)||(365592-365681)
chr3 (32-98)||(35908506-35908572)
chr3 (30-118)||(33175835-33175922)
chr3 (87-116)||(53013019-53013048)
chr3 (1-29)||(53012997-53013025)
[»] chr2 (23 HSPs)
chr2 (1-120)||(27952317-27952436)
chr2 (1-119)||(2155938-2156056)
chr2 (1-119)||(22011407-22011525)
chr2 (1-119)||(31636308-31636426)
chr2 (1-119)||(27956154-27956272)
chr2 (1-119)||(31634075-31634193)
chr2 (1-119)||(33655599-33655716)
chr2 (30-119)||(15129390-15129478)
chr2 (30-119)||(36647293-36647381)
chr2 (35-120)||(2165899-2165984)
chr2 (30-108)||(21772375-21772452)
chr2 (30-95)||(23457646-23457712)
chr2 (30-119)||(33051618-33051707)
chr2 (30-108)||(5171596-5171674)
chr2 (34-120)||(8294582-8294667)
chr2 (30-94)||(32161993-32162058)
chr2 (35-95)||(28737911-28737971)
chr2 (30-119)||(1518193-1518281)
chr2 (30-79)||(12966477-12966526)
chr2 (40-98)||(18945970-18946029)
chr2 (30-64)||(4184929-4184963)
chr2 (34-95)||(28737841-28737903)
chr2 (35-67)||(23456580-23456612)
[»] chr1 (21 HSPs)
chr1 (1-120)||(50857443-50857562)
chr1 (1-120)||(8931191-8931310)
chr1 (1-119)||(13443988-13444106)
chr1 (3-113)||(13441612-13441715)
chr1 (30-120)||(31915550-31915639)
chr1 (30-109)||(28660756-28660835)
chr1 (35-119)||(23987581-23987665)
chr1 (30-120)||(12944116-12944206)
chr1 (33-95)||(31913380-31913442)
chr1 (34-95)||(43681465-43681528)
chr1 (37-72)||(10927199-10927234)
chr1 (37-119)||(40058102-40058184)
chr1 (30-88)||(50713713-50713772)
chr1 (30-120)||(21903752-21903840)
chr1 (30-93)||(8967828-8967893)
chr1 (30-95)||(10925740-10925803)
chr1 (30-119)||(10928289-10928377)
chr1 (30-109)||(239687-239766)
chr1 (30-66)||(8221488-8221524)
chr1 (35-119)||(26981516-26981598)
chr1 (30-109)||(28661078-28661157)
[»] chr5 (10 HSPs)
chr5 (1-120)||(40778785-40778904)
chr5 (5-118)||(21848966-21849079)
chr5 (30-120)||(18252416-18252505)
chr5 (30-95)||(492567-492633)
chr5 (33-120)||(8456379-8456465)
chr5 (30-96)||(19497326-19497393)
chr5 (30-109)||(22440858-22440936)
chr5 (30-121)||(26140343-26140433)
chr5 (86-121)||(21844435-21844470)
chr5 (30-67)||(9868457-9868494)
[»] chr4 (18 HSPs)
chr4 (1-119)||(6659331-6659448)
chr4 (30-118)||(7723665-7723751)
chr4 (30-120)||(19935487-19935576)
chr4 (30-119)||(24667657-24667745)
chr4 (30-119)||(13991380-13991468)
chr4 (34-119)||(40206153-40206237)
chr4 (34-109)||(17254893-17254968)
chr4 (27-90)||(18689549-18689613)
chr4 (36-95)||(50515918-50515978)
chr4 (33-95)||(22486799-22486861)
chr4 (30-87)||(21433594-21433652)
chr4 (30-95)||(54700620-54700686)
chr4 (30-67)||(38888042-38888079)
chr4 (1-33)||(13085178-13085210)
chr4 (30-67)||(9260573-9260610)
chr4 (30-67)||(13990729-13990766)
chr4 (1-33)||(22716629-22716661)
chr4 (135-183)||(31255336-31255384)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-119)||(45262-45380)
scaffold0110 (46-119)||(46733-46806)
[»] scaffold0054 (2 HSPs)
scaffold0054 (33-91)||(37714-37772)
scaffold0054 (30-79)||(49322-49371)
[»] scaffold0240 (3 HSPs)
scaffold0240 (34-92)||(16051-16109)
scaffold0240 (30-95)||(1658-1723)
scaffold0240 (33-95)||(14850-14912)
[»] scaffold0251 (1 HSPs)
scaffold0251 (30-95)||(9702-9769)
[»] scaffold0024 (1 HSPs)
scaffold0024 (30-95)||(145734-145800)
[»] scaffold0330 (1 HSPs)
scaffold0330 (30-95)||(17640-17705)
[»] scaffold0531 (1 HSPs)
scaffold0531 (35-72)||(11635-11672)


Alignment Details
Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13882804 - 13882686
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13882804 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 13882705  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  13882704 acgcttccgtactgcgtca 13882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 859270 - 859153
Alignment:
Q  5 ttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  859270 ttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaatcctacgc 859171  T
Q  105 ttccgtactgcgtcaagt 122  Q
    ||||||| ||||||||||    
T  859170 ttccgtattgcgtcaagt 859153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 1217274 - 1217157
Alignment:
Q  5 ttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  1217274 ttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaatcctacgc 1217175  T
Q  105 ttccgtactgcgtcaagt 122  Q
    ||||||| ||||||||||    
T  1217174 ttccgtattgcgtcaagt 1217157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 13886261 - 13886159
Alignment:
Q  17 gtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcg 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13886261 gtttgtcgcttgcaaacctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcg 13886162  T
Q  117 tca 119  Q
    |||    
T  13886161 tca 13886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 1220553 - 1220446
Alignment:
Q  6 tattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgct 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  1220553 tattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgtttgcaaacttgttcatttctatgtaggtttagcgtttgctaaccctacgct 1220454  T
Q  106 tccgtact 113  Q
    || |||||    
T  1220453 tctgtact 1220446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 7632748 - 7632827
Alignment:
Q  120 agtatcttgagtattcaaaggagactctccatcatcttccttcatttcaaaatttgacacatctgcttatgaggactaac 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7632748 agtatcttgagtattcaaaggagactctccatcatcttccttcatttcaaaatttgacacatctgcttctgaggactaac 7632827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13886306 - 13886245
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaac 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13886306 acccttattttgataggtttgtcgcttgcaaacctattttcacaagtttgtcgcttgcaaac 13886245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 4888770 - 4888684
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaag 121  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||| | |||||||||||||| |||||||||    
T  4888770 ctattttcacaggtttgtcgcttgcaaacttgttcttttctatctaggttcagcgcatgct-agcctacgcttccgtattgcgtcaag 4888684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 27309704 - 27309636
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaac 97  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  27309704 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagcgcttgctaac 27309636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 29175780 - 29175854
Alignment:
Q  53 gcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaagtatctt 127  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  29175780 gcttgcaaactttttcttttcaatctaggtttagcgcttgctaaccctacgcttccgtagtgagtcaattatctt 29175854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 1786683 - 1786763
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    |||||||||||| || ||||||||||||||||||||||  ||||||||||| ||||||| |||||||| ||||||||||||    
T  1786683 aaccctattttcgcatgtttgtcgcttgcaaacttgttatttttctatctaggtttagcacttgctaatcctacgcttccg 1786763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 7803120 - 7803029
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaag 121  Q
    |||| |||||||| |||||||| ||||||||||||| |||||||| | ||| ||||| | |||||||| ||||||||||||||||||||||||    
T  7803120 aaccttattttcataagtttgttgcttgcaaacttgtttcttttcgacctaggtttaacccttgctaa-cctacgcttccgtactgcgtcaag 7803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 5934607 - 5934670
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||    
T  5934607 cctattttcacaagtttgtcgcttgcaaatttgtttcttttcaatctaggtttagcgcttgcta 5934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 11000915 - 11000849
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| ||||| |||||||||||||||    
T  11000915 aaccctattttcactagtttgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgcta 11000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 24840143 - 24840201
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagc 87  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  24840143 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggtttagc 24840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 1365672 - 1365737
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||||||  |||||| ||||||||||| |||| ||||| |||||||||||||||    
T  1365672 aaccctattttcacaagttcatcgcttacaaacttgttcctttcaatctaggtttagcgcttgcta 1365737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 30217819 - 30217879
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||    
T  30217819 ctattttcacaagtttgtcgcttgcgaacttgttc-tttcaatctaggtttagcgcttgcta 30217879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 27142666 - 27142722
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagttta 85  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  27142666 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaggttta 27142722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 1369805 - 1369894
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||| ||||| ||||| |||||||| | ||| |||||||| ||||||||||    
T  1369805 aaccctattttaacaagtttatcgcttgcaaacttgtttcttttcaatctaggtttaacgcttgct-agcctccgcttccg-actgcgtcaa 1369894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 1874538 - 1874627
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| ||| | |||||| | ||||||| | |||||||||||||| |||||    
T  1874538 aaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatcaaggtttagtgtttgctaa-catacgcttccgtactacgtca 1874627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 3778797 - 3778735
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttg 92  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||  ||||| |||||    
T  3778797 aaccctattttcacaagtttctcgcttgcaaacttgttcatttcaatctatatttagtgcttg 3778735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 1753683 - 1753629
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagc 87  Q
    |||||||||||||||||||||||||||||||| |||||||| || || |||||||    
T  1753683 ctattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttaggtttagc 1753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 1883489 - 1883555
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| ||||| |||||| | ||||||    
T  1883489 aaccttattttcacaagtttgtcgtttgcaaacttgtttcttttcaatctaggtttagtgtttgcta 1883555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 11228981 - 11229046
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgct 94  Q
    |||||| |||||||| ||||||||| ||||||||||||| ||||| ||||| ||||||| ||||||    
T  11228981 aacccttttttcacacgtttgtcgcctgcaaacttgttctttttcaatctaggtttagcacttgct 11229046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 4133359 - 4133284
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    |||||||||||||||||||||||| ||| |||||| | ||| |||||||||||||  ||||| | ||||||||||||    
T  4133359 ctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcatttgct-agcctacgcttccg 4133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 6451839 - 6451776
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttg 92  Q
    |||| |||||||||| |||||||||||||||||||| ||| |||| |||||  |||||||||||    
T  6451839 aaccttattttcacaggtttgtcgcttgcaaacttgtttcctttcaatctagatttagcgcttg 6451776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 8063885 - 8063843
Alignment:
Q  37 ttttcacaagtttgtcgcttgcaaacttgttcttttctatcta 79  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||    
T  8063885 ttttcacaaatttatcgcttgcaaacttgttcttttcaatcta 8063843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 11228721 - 11228787
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||| |||||||||||||||| |||||||| ||||||| |||| | |||||| | ||||||    
T  11228721 aaccctatttccacaagtttgtcgcttccaaacttgtttcttttttatcaaggtttagtgtttgcta 11228787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 7639478 - 7639523
Alignment:
Q  154 tcttccttcatttcaaaatttgacacatctgcttatgaggactaac 199  Q
    |||||||||||||||||||||||||| |||| || ||||| |||||    
T  7639478 tcttccttcatttcaaaatttgacacttctgtttctgagggctaac 7639523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 29974342 - 29974278
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgttcttt--tctatctaagtttagcgcttgcta 95  Q
    |||||||||| | |||||| ||||||||| |||||||||  ||||||||| |||| |||||||||    
T  29974342 cctattttcataggtttgtagcttgcaaatttgttcttttctctatctaaatttaacgcttgcta 29974278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 1e-58; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3536005 - 3536123
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3536005 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 3536104  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  3536105 acgcttccgtactgcgtca 3536123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3542216 - 3542334
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  3542216 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttacaaacttgttcttttctatctaggtttagcgcttgctaaccct 3542315  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  3542316 acgcttccgtactgcgtca 3542334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30049887 - 30050005
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30049887 accctaattttgataggtttgtcgcttgcaactctattttcacaagtttgtcgcttgcaaacttgttcttttctatataggtttagcgcttgctaaccct 30049986  T
Q  101 acgcttccgtactgcgtca 119  Q
     ||||||||||||||||||    
T  30049987 tcgcttccgtactgcgtca 30050005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 29340920 - 29340810
Alignment:
Q  5 ttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgc 104  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  29340920 ttattttgataggtttgtcgcttgtaaccctattttcacaagtttgtcgcttgcaaacttgtttttttctatctaggtttagcgcctgctaaccctacgc 29340821  T
Q  105 ttccgtactgc 115  Q
    |||||||||||    
T  29340820 ttccgtactgc 29340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30052174 - 30052292
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  30052174 accctaattttgataggtttgtcgcttgcaactctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgctttctaaccct 30052273  T
Q  101 acgcttccgtactgcgtca 119  Q
     || |||| ||||||||||    
T  30052274 tcgattccatactgcgtca 30052292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 33615593 - 33615503
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| | | |||||| ||||||| ||||||||    
T  33615593 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggttttgcgcttg-ttagcctacgtttccgtaatgcgtcaa 33615503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 27822207 - 27822118
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||| || |||||||| ||||| | ||||||||||||||||||||||    
T  27822207 aaccctgttttcacaagtttgtcgcttgaaaacttgttccttttctatttaggtttagcgtttgct-agcctacgcttccgtactgcgtca 27822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 29342061 - 29342114
Alignment:
Q  67 tcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29342061 tcttttctatctaggtttagcgcttgctaaccctacgcttccgtactgcgtcaa 29342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 11658936 - 11659000
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaacc 98  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||| |||||| |||||||||||    
T  11658936 ctattttcacaagtttatcgcttgcaaatttgttcttttcaatctaggtttagtgcttgctaacc 11659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 18727115 - 18727186
Alignment:
Q  37 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    |||||||||||||||||||||| |||||||  ||||| ||||| |||||||| ||||| | ||||||||||||    
T  18727115 ttttcacaagtttgtcgcttgcgaacttgtgtttttcaatctaggtttagcgtttgct-agcctacgcttccg 18727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 1127258 - 1127320
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||| ||||||||||||||||||| |||||||  ||||| |||||||||| ||||    
T  1127258 ctattttcacaaatttgtcgcttgcaaacttgtttctttttaatctaggtttagcgctcgcta 1127320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 14238436 - 14238502
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| || || |||||| | ||||||    
T  14238436 aaccttattttcacaagtttgtcgcttgcaaacttgtttcttttcaatttatgtttagtgtttgcta 14238502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 8049049 - 8049012
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgttctttt 72  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  8049049 tattttcacaagtttgtcacttgcaaactttttctttt 8049012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 12882123 - 12882159
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt 66  Q
    |||||||||||||||||||||||||||  ||||||||    
T  12882123 aaccctattttcacaagtttgtcgctttaaaacttgt 12882159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 33215246 - 33215186
Alignment:
Q  36 attttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||| |||||||||||||||||||| |||||||  |||||  ||||||| ||||||    
T  33215246 attttcacaggtttgtcgcttgcaaacttgtttctttttaatctagatttagcgtttgcta 33215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22921968 - 22921850
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  22921968 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttattcttttctatctaggtttagcgcttgctaaccct 22921869  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  22921868 acgcttccgtactgcgtca 22921850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6845307 - 6845425
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  6845307 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttatcgcttgtaaacttgttcttttctatctaggtttagcgcttgctaaccct 6845406  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  6845407 acgcttccgtactgcgtca 6845425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22926766 - 22926648
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  22926766 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgctttctaaccct 22926667  T
Q  101 acgcttccgtactgcgtca 119  Q
    ||||||||||||| |||||    
T  22926666 acgcttccgtactacgtca 22926648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 42891782 - 42891664
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  42891782 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctagccct 42891683  T
Q  101 acgcttccgtactgcgtca 119  Q
    ||||||||||| |||||||    
T  42891682 acgcttccgtattgcgtca 42891664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22512164 - 22512046
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22512164 acccttattttgataggtttgtcacttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgctaaccct 22512065  T
Q  101 acgcttccgtactgcgtca 119  Q
    || ||||||||||||||||    
T  22512064 acacttccgtactgcgtca 22512046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22519464 - 22519346
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22519464 acccttattttgataggtttgtcacttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctacctaggtttagcgcttgctaaccct 22519365  T
Q  101 acgcttccgtactgcgtca 119  Q
    || ||||||||||||||||    
T  22519364 acacttccgtactgcgtca 22519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23570555 - 23570665
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23570555 acccttattttgataggtttgtcgcttgcaaccttattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 23570654  T
Q  101 acgcttccgta 111  Q
    |||||||||||    
T  23570655 acgcttccgta 23570665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37189837 - 37189956
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||| |||||||||||||    
T  37189837 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttattcttttctatctagttttagagcttgctaaccct 37189936  T
Q  101 acgcttccgtactgcgtcaa 120  Q
    | ||||||||||||||||||    
T  37189937 aagcttccgtactgcgtcaa 37189956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22520917 - 22520799
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  22520917 acccttattttgataggtttgtcacttgcaaccctattttcacaaatttgtcgcttgcaaacttgatcttttctacctaggtttagcgcttgctaaccct 22520818  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||| || |||||||    
T  22520817 acgcttccttattgcgtca 22520799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42890363 - 42890457
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42890363 acccttattttgataggtttgtcgcttgcagccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgcta 42890457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23573554 - 23573632
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatcta 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23573554 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgtaaacttgttattttctatcta 23573632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 2189810 - 2189722
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| | ||||||||||||||||||||||    
T  2189810 aaccttattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgct-agcctacgcttccgtactgcgtca 2189722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 18468649 - 18468737
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||  ||||| |||||||||||    
T  18468649 aaccctattttcacaagtttgtcgcttgcaagcttgttcttttctacctaggtttagcgcttgctaaccct-tgcttctgtactgcgtca 18468737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 24731231 - 24731317
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||| | |||||||| ||||||||||||||    
T  24731231 ctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaggtttagcgcttgct-agcctacgctcccgtactgcgtcaa 24731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 2687742 - 2687808
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgcta 95  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  2687742 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttctatctaggtttagcgctcgcta 2687808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 16598249 - 16598318
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttct-atctaagtttagcgcttgctaacc 98  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  16598249 aaccctattttcacaagtttgtcgcgtgcaaacttgtttctttctaatctaagtttagcgcttgctaacc 16598318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 24731035 - 24731121
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||| | |||||| ||| |||||||||||    
T  24731035 cctattttcacaagtttgttgcttgcaaacttgttccttttcaatctaaatttagcgcttgct-agcctacggttctgtactgcgtca 24731121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 26374900 - 26374965
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||| | ||| |||||||||    
T  26374900 aaccctatttttacaagtttgtcgcttgcgaacttgttcttttcaatctaggcttaacgcttgcta 26374965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 2609584 - 2609547
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2609584 aaccctattttcacaagtttgtcacttgcaaacttgtt 2609547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 14130165 - 14130244
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    |||| ||||||||||| ||| |||||||||||||||| ||||||| |||||  |||| ||||||| || ||||||||||||    
T  14130165 aaccttattttcacaaatttatcgcttgcaaacttgtctcttttcgatctagatttaacgcttgc-aagcctacgcttccg 14130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 26378031 - 26378090
Alignment:
Q  60 aacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    |||||||||||||| |||||  ||||||||||||| | |||||||||||||||| ||||||    
T  26378031 aacttgttcttttcaatctagatttagcgcttgct-agcctacgcttccgtactacgtcaa 26378090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18180801 - 18180770
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  18180801 acccttattttgataggtttgtcgcttgcaac 18180770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 24578866 - 24578799
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaa 96  Q
    |||||||||||||||  |||  |||||||||||||| |||||||| ||||| ||||||||||| ||||    
T  24578866 aaccctattttcacagatttaccgcttgcaaacttgtttcttttcgatctaggtttagcgctttctaa 24578799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 2689146 - 2689183
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    |||||||||||||||  |||||||||||||||||||||    
T  2689146 aaccctattttcacagttttgtcgcttgcaaacttgtt 2689183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 20693799 - 20693836
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  20693799 aaccatattttcacaaatttgtcgcttgcaaacttgtt 20693836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 23573639 - 23573702
Alignment:
Q  57 gcaaacttgttcttttctatctaagtttagcgcttg--ctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||| |||||||||| || ||||||||||  ||||||||||| ||| |||||||||||    
T  23573639 gcaaacttgttattttctatct-agcttagcgcttgccctaaccctacgtttctgtactgcgtca 23573702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 3e-56; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 43306790 - 43306672
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43306790 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgttgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 43306691  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  43306690 acgcttccgtactgcgtca 43306672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43304078 - 43303959
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  43304078 acccttattttaataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaacctt 43303979  T
Q  101 acgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||    
T  43303978 acgcttccgtactgcgtcaa 43303959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5128880 - 5128998
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  5128880 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcctgctaaccct 5128979  T
Q  101 acgcttccgtactgcgtca 119  Q
    ||||||| |||||||||||    
T  5128980 acgcttctgtactgcgtca 5128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3063855 - 3063737
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||    
T  3063855 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaactctttcttttctatctaggtttaacgcttgctaaccct 3063756  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||| ||||||||||||    
T  3063755 acgctttcgtactgcgtca 3063737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3068993 - 3068875
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||||| |||||||||||||||||| |    
T  3068993 acccttattttgataggtttgtcgcttgcaaccctatttttacaagttttttccttgcaaacttgttcttttctatctaggtttagcgcttgctaaccat 3068894  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  3068893 acgcttccgtactgcgtca 3068875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 2472777 - 2472688
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    |||||||||||||||||||||||| ||||||||||||   |||| || || |||||||||||||| | ||||||||| |||||||||||||    
T  2472777 aaccctattttcacaagtttgtcggttgcaaacttgtctctttcaatttaggtttagcgcttgct-agcctacgctttcgtactgcgtcaa 2472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 52708844 - 52708923
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    ||||||| |||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  52708844 aaccctactttcacaagtttatcgcttgcaaatttgttctttttctatctaggtttagcgcttgttaa-cctacgcttccg 52708923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 45168401 - 45168338
Alignment:
Q  37 ttttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||    
T  45168401 ttttcacaagtttgtcgcttgcaaacttgtttatttcaatctaggtttagcacttgctaaccct 45168338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 365681 - 365592
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||||||||||  || ||||| |||||| | || |||||||| ||||| | |||||||||||||| ||||||||    
T  365681 aaccctattttcacaagtttgtcgcttgggaatttgttattttctttttaggtttagcgtttgct-agcctacgcttccgtaatgcgtcaa 365592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 35908572 - 35908506
Alignment:
Q  32 ccctattttcacaagtttgtcgcttgcaaactt-gttcttttctatctaagtttagcgcttgctaacc 98  Q
    ||||||||| |||||||||||| ||||||| || ||||||| ||||||| ||||||||||||||||||    
T  35908572 ccctatttttacaagtttgtcgtttgcaaattttgttcttt-ctatctaggtttagcgcttgctaacc 35908506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 33175835 - 33175922
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtc 118  Q
    ||||||||||||| |||||||||  |||||||||||| ||||||| || || ||||| || ||||| | |||||||||||| ||||||||    
T  33175835 aaccctattttcataagtttgtcctttgcaaacttgtctcttttcaatataggtttatcgtttgct-agcctacgcttccg-actgcgtc 33175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 116
Target Start/End: Original strand, 53013019 - 53013048
Alignment:
Q  87 cgcttgctaaccctacgcttccgtactgcg 116  Q
    ||||||||||||||||||||||||||||||    
T  53013019 cgcttgctaaccctacgcttccgtactgcg 53013048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 53012997 - 53013025
Alignment:
Q  1 acccttattttgataggtttgtcgcttgc 29  Q
    |||||||||||||||||||||||||||||    
T  53012997 acccttattttgataggtttgtcgcttgc 53013025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27952436 - 27952317
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27952436 acccttattttcaaaggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 27952337  T
Q  101 acgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||    
T  27952336 acgcttccgtactgcgtcaa 27952317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2155938 - 2156056
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  2155938 acccttattttgataggtttgtcgcttgcaatcctattttcacaagtttgtcgctcgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 2156037  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  2156038 acgcttccgtactgcgtca 2156056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22011407 - 22011525
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22011407 acccttattttgataggtttgtcgcttccaaccctattttcacaagtttgtcacttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 22011506  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  22011507 acgcttccgtactgcgtca 22011525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31636308 - 31636426
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  31636308 acccttattttgataggtttgtcgcttgcaaccatattttcacaagtttgtcgcttgcaaactagttcttttctatctaggtttagcgcttgctaaccct 31636407  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  31636408 acgcttccgtactgcgtca 31636426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27956272 - 27956154
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27956272 acccttattttcataggtttgtcgcttgcaaccctattttcataggtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctaaccct 27956173  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  27956172 acgcttccgtactgcgtca 27956154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31634075 - 31634193
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  31634075 acccttattttgataggtttgtcgcttgcaatcctattttcacaagtttgtcgctagcaaacttgttcttttctatctaggtttagcgtttgctaaccct 31634174  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||||||||    
T  31634175 acgcttccgtactgcgtca 31634193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33655599 - 33655716
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||    
T  33655599 acccttattttgataggtttgtcgtttgcaaccctattttcacaagtttgtcgcttgcaaacttgtatttttctatctaggtttagcgcttgctaa-cct 33655697  T
Q  101 acgcttccgtactgcgtca 119  Q
    || ||||||||||||||||    
T  33655698 acacttccgtactgcgtca 33655716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 15129390 - 15129478
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||||||||||| |||||    
T  15129390 aaccctattttcacaagtttgtcgcttgcgaacttgttcttttctatctaggtttagcgcttgct-agcctacgcttccgtactacgtca 15129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 36647293 - 36647381
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| | ||||||||||||||||||||||    
T  36647293 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttcaatcgaggtttagcgcttgct-agcctacgcttccgtactgcgtca 36647381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 2165899 - 2165984
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    |||||| | |||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||  |||||||||||||    
T  2165899 tattttgataagtttgttgcttgcaaacttgttcttttctatctaggtttaacgcttgttaaccctacgctgtcgtactgcgtcaa 2165984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 21772375 - 21772452
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttcc 108  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||||    
T  21772375 aaccctattttcataagtttgtcgcttgcaaacttgtttttttcaatctaagtttagcgttggctaa-cctacgcttcc 21772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 23457646 - 23457712
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||    
T  23457646 aaccctattttcacaagtttgtcgcttgcaaacttgtttattttcaatctaggtttagcgcttgcta 23457712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 33051618 - 33051707
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| || || |||||||||||||| | |||| ||||||||||| |||||    
T  33051618 aaccctattttcaaaagtttgtcgcttgcaaacttgttctttttcaatttaggtttagcgcttgct-agcctaagcttccgtactacgtca 33051707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 5171674 - 5171596
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaagtttagcgcttgctaaccctacgcttcc 108  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||||  ||||||||||| ||| |||||||||||    
T  5171674 aaccctatttttacaagtttgtcgcttgcaaacttgtctcttttcaatctagatttagcgcttgttaa-cctacgcttcc 5171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 8294582 - 8294667
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttctt-ttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | |||| ||||||| ||||||||||    
T  8294582 ctatttttacaagtttgtcgcttgcaaacgtgttcttcttctatctaagtttagcacttgct-agcctatgcttccg-actgcgtcaa 8294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 32162058 - 32161993
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgct 94  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||| ||||||||    
T  32162058 aaccctattttcacaagtttgtcacttgcaaacttgtttcttttcgatctaggtttaacgcttgct 32161993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 28737911 - 28737971
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||| ||||||| |||||||    
T  28737911 tattttcaaaagtttgtcgcttgcaaacttgctcttttcaatctaggtttagcacttgcta 28737971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 1518193 - 1518281
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||| ||||| ||||||||| ||||||| | |||| ||||| ||| |||||||||||    ||||||||||||||||||||    
T  1518193 aaccctattttcataagttcgtcgcttgcgaacttgtccctttcaatctaggttaagcgcttgctagga-tacgcttccgtactgcgtca 1518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 12966477 - 12966526
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatcta 79  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  12966477 aaccctattttcacaagttcgtcgcttgcgaacttgttcttttcaatcta 12966526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 18945970 - 18946029
Alignment:
Q  40 tcacaagtttgtcgcttgcaaactt-gttcttttctatctaagtttagcgcttgctaacc 98  Q
    |||||||||||||||||||||| ||  ||||| || ||||| ||||||||||||||||||    
T  18945970 tcacaagtttgtcgcttgcaaatttatttcttctcaatctacgtttagcgcttgctaacc 18946029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 4184929 - 4184963
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaactt 64  Q
    ||||||||||||||||||||||||||||| |||||    
T  4184929 aaccctattttcacaagtttgtcgcttgcgaactt 4184963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 28737841 - 28737903
Alignment:
Q  34 ctattttcacaagttt-gtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||| ||| |||||||||||  ||||||| || || |||||||||||||||    
T  28737841 ctattttcacaagttttgtctcttgcaaacttactcttttcaatttaggtttagcgcttgcta 28737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 23456580 - 23456612
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    |||||||| ||||||||||||||||||||||||    
T  23456580 tattttcaaaagtttgtcgcttgcaaacttgtt 23456612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 50857562 - 50857443
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  50857562 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttacaaacttattcttttctatctaggtttagcgcttgctaaccct 50857463  T
Q  101 acgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||    
T  50857462 acgcttccgtactgcgtcaa 50857443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8931191 - 8931310
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  8931191 acccttatattgataggtttgtcgcttgcaaccctattttcacaagtttatcgcttgcaaacttgtttttttcaatctaggtttagcgcttgctaaccct 8931290  T
Q  101 acgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||    
T  8931291 acgcttccgtactgcgtcaa 8931310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13444106 - 13443988
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  13444106 acccttattttgatatgtttgtcgcttgcaatcctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagtgcttgttaaccct 13444007  T
Q  101 acgcttccgtactgcgtca 119  Q
    | ||||||| |||||||||    
T  13444006 atgcttccgaactgcgtca 13443988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 13441715 - 13441612
Alignment:
Q  3 ccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctac 102  Q
    ||||||||| |||||||| |||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  13441715 ccttattttaataggtttttcgcttgcaaccctattttcaca-------cgcttgcaaaattgttcttttctatctaagtttagcgcttgctaaccatac 13441623  T
Q  103 gcttccgtact 113  Q
     ||||||||||    
T  13441622 tcttccgtact 13441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 31915550 - 31915639
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||||||||||||||||||||||  |||| | |||||||||| ||||||| | ||| |||||||||||| ||||||    
T  31915550 aaccctattttcacaagtttgtcgcttgcaaacttgtttctttcaacctaagtttagtgcttgct-agcctgcgcttccgtactacgtcaa 31915639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 28660835 - 28660756
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| | ||||||||||||    
T  28660835 aaccctattttcacaagtttgtcgcttgcaaacttgtttcttatctatctaggtttagcgtttgct-atcctacgcttccg 28660756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 23987581 - 23987665
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||| ||| |||||||||| |||||||||||||| | |||||||    
T  23987581 tattttcacaagtttgtcgtttgcaaagttgttctttttctatctaggttcagcgcttgct-accctacgcttccgaattgcgtca 23987665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 12944116 - 12944206
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||| |||||  ||||||||||||| | ||||||||| |||  ||||||||    
T  12944116 aaccctatttttacaagtttgtcgtttgcaaacttgtttcttttcaatctagatttagcgcttgct-agcctacgctttcgtgttgcgtcaa 12944206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 31913380 - 31913442
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||| ||||||||||||||||||||||||||  |||| | ||| |||||||||||||||    
T  31913380 cctatttttacaagtttgtcgcttgcaaacttgtttctttcaacctaggtttagcgcttgcta 31913442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 43681465 - 43681528
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttg--ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||| |||||||||||||||||||  || ||||| ||||| |||||||||||||||    
T  43681465 ctattttcacaaatttgtcgcttgcaaacttgtttttttttcaatctaggtttagcgcttgcta 43681528  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 10927199 - 10927234
Alignment:
Q  37 ttttcacaagtttgtcgcttgcaaacttgttctttt 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  10927199 ttttcacaagtttgtcgcttgcaaacttgttctttt 10927234  T

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Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 40058184 - 40058102
Alignment:
Q  37 ttttcacaagtttgtcgcttgcaaactt-gttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||||| |||||||||||||||||||||  ||||||||||| || |||||  ||||||| | ||||||||||||||| ||||||    
T  40058184 ttttcataagtttgtcgcttgcaaacttatttcttttctatttaggtttactgcttgct-agcctacgcttccgtaccgcgtca 40058102  T

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Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 50713713 - 50713772
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaagtttagcg 88  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||    
T  50713713 aaccctattttcacaagtttgtcgcctgcgaacttgtctcttttcaatctaggtttagcg 50713772  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 21903752 - 21903840
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||||||||| ||||| | ||||||| || |||||| |||||||||||||||||  ||| ||||| |||||| ||||||||||    
T  21903752 aaccctattttcacaagtt-gtcgcctacaaacttatttcttttcaatctaagtttagcgcttattaa-cctactcttccg-actgcgtcaa 21903840  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 8967893 - 8967828
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttt--tctatctaagtttagcgcttgc 93  Q
    ||||||||||||| | |||||||  |||||||||||||||||  |||||||| ||||| |||||||    
T  8967893 aaccctattttcataggtttgtcatttgcaaacttgttcttttctctatctaggtttaacgcttgc 8967828  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 10925740 - 10925803
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||| |||||| |||||||||||||||||||| ||||  ||||| || || |||||||||||||||    
T  10925740 aaccatatttttacaagtttgtcgcttgcaaaattgt--ttttcaatttaggtttagcgcttgcta 10925803  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 10928289 - 10928377
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt-tcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||| |||||||||||||||||| ||| ||||||| | ||||||  ||||| ||||||| |||||| | ||||||||||| ||||||||||    
T  10928289 aaccttattttcacaagtttgtcacttacaaacttatatctttttaatctaggtttagcacttgct-agcctacgcttcc-tactgcgtca 10928377  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 239687 - 239766
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    ||||||||||||| || |||| ||||||| |||||| |||||||  || |||||||||| |||||| | ||||||||||||    
T  239687 aaccctattttcataaatttgacgcttgctaacttgtttctttttaatataagtttagcccttgct-agcctacgcttccg 239766  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 8221488 - 8221524
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgt 66  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  8221488 aaccctattttcataagtttgtcgtttgcaaacttgt 8221524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 26981516 - 26981598
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||||| |||||||| |||||||||||||||||  |||| |||||  |||||| || | ||| |||||||||||| |||||||||    
T  26981516 tatttttacaagtttttcgcttgcaaacttgtttctttcaatctagatttagccctagataa-cctacgcttccg-actgcgtca 26981598  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 28661157 - 28661078
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||| || || || ||||||| |||||| | ||||||||||||    
T  28661157 aaccctatttttacaggtttttcgcttgcaaacttgtttcttatcaatttaggtttagcacttgct-agcctacgcttccg 28661078  T

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Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40778904 - 40778785
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  40778904 acccttattttgataggtttgtcgcttgcaaccctatttttacaagtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgttaaccct 40778805  T
Q  101 acgcttccgtactgcgtcaa 120  Q
     |||||||||||||||||||    
T  40778804 gcgcttccgtactgcgtcaa 40778785  T

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Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 21849079 - 21848966
Alignment:
Q  5 ttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  21849079 ttattttgataagtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaggtttggcgcttgctaaccctacgc 21848980  T
Q  105 ttccgtactgcgtc 118  Q
    ||||||||||||||    
T  21848979 ttccgtactgcgtc 21848966  T

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Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 18252416 - 18252505
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttct-tttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||||| ||| ||||| |||||| ||||||||||    
T  18252416 aaccctattttcacaggtttgtcgcttgcaaacttgttctatttctatctaggtttaacgcttg-taagcctacacttccg-actgcgtcaa 18252505  T

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Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 492567 - 492633
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  492567 aaccctatcttcacaagtttgtcgcttgcaaacttgtttcttttcaatctaaatttagcgcttgcta 492633  T

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Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 8456465 - 8456379
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgtt-cttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    |||||||| ||||||| ||||||||| |||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||||||||||    
T  8456465 cctatttttacaagttcgtcgcttgcgaacttgtttcttttcaatctaggtttagcgcttgct-accctacgcttccg-actgcgtcaa 8456379  T

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Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 19497393 - 19497326
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaa 96  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||||  |||||||||||||||    
T  19497393 aaccctattttcacaagtttgtcgcttgcaaacttgttctttttttttctacatttagcgcttgctaa 19497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 22440858 - 22440936
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    ||||||||| ||| ||||||||||||||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||    
T  22440858 aaccctattatcataagtttgtcgcttgcgaacatgttcttttctatctaggtttagcacttgct-agcctacgcttccg 22440936  T

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Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 26140343 - 26140433
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttct-tttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaag 121  Q
    ||||||||||||| ||||||||||||||||| |||||| | |||| |||||  ||||||| ||||||| |||| ||||||| |||||||||||    
T  26140343 aaccctattttcataagtttgtcgcttgcaatcttgttttctttcaatctagatttagcgtttgctaa-cctatgcttccg-actgcgtcaag 26140433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 21844470 - 21844435
Alignment:
Q  86 gcgcttgctaaccctacgcttccgtactgcgtcaag 121  Q
    ||||||||||||||||||||||||||||||||||||    
T  21844470 gcgcttgctaaccctacgcttccgtactgcgtcaag 21844435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 9868494 - 9868457
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  9868494 aaccctattttcacaagtttgttgcttgtaaacttgtt 9868457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6659448 - 6659331
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||    
T  6659448 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctagatttagcgcttgctaa-cct 6659350  T
Q  101 acgcttccgtactgcgtca 119  Q
    || ||||||||||||||||    
T  6659349 acacttccgtactgcgtca 6659331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 7723751 - 7723665
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtc 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| | |||||||||| ||||||||||    
T  7723751 aaccctattttcacaagtttgtagcttgcaaacttgttcttttcaatct-agtttagcgcttgct-agcctacgcttctgtactgcgtc 7723665  T

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Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 19935487 - 19935576
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtcaa 120  Q
    ||||||||||||| |||||||||||||||||| || || |||||||||| ||||||||||| ||| | |||||||||| ||||||||||||    
T  19935487 aaccctattttcataagtttgtcgcttgcaaatttatttttttctatctgagtttagcgctggct-agcctacgcttctgtactgcgtcaa 19935576  T

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Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 24667657 - 24667745
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||||||||||||||||||||| || ||| | ||| |||||||||||||| ||||| |||||||| | ||||||||||| ||||||||||    
T  24667657 aaccctattttcacaagtttgttgcctgcgagcttcttcttttctatctaggtttaacgcttgct-agcctacgcttccatactgcgtca 24667745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 13991468 - 13991380
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||| ||||||| || |||||||||||||||||||| |||||||| |||||  ||||||||||||| | |||||||||||| |||||||||    
T  13991468 aaccttattttcgcatgtttgtcgcttgcaaacttgtttcttttcaatctagatttagcgcttgct-agcctacgcttccg-actgcgtca 13991380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 40206153 - 40206237
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    ||||||||||||||||||||||||| |||||||   |||| || ||  ||||||||||||| | |||||||||||||| |||||||    
T  40206153 ctattttcacaagtttgtcgcttgcgaacttgtctctttcaatttagatttagcgcttgct-agcctacgcttccgtagtgcgtca 40206237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 17254968 - 17254893
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgctaaccctacgcttccg 109  Q
    |||||||||||||||||||||||| ||| |||||| | ||| |||||||||||||| ||||| | ||||||||||||    
T  17254968 ctattttcacaagtttgtcgcttgaaaatttgttcatcttcaatctaagtttagcgtttgct-agcctacgcttccg 17254893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 18689613 - 18689549
Alignment:
Q  27 tgcaaccctattttcacaagtttgtcgcttgcaaac-ttgttcttttctatctaagtttagcgct 90  Q
    |||||||||||||| ||||||||||||| ||||||| || |||||||| ||||| ||||||||||    
T  18689613 tgcaaccctatttttacaagtttgtcgcatgcaaacttttttcttttcaatctaggtttagcgct 18689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 50515978 - 50515918
Alignment:
Q  36 attttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||||||||||||||||| ||||| ||  ||||||| ||||||||||||    
T  50515978 attttcacaagtttgtcgcttgcaaacttgtttcttctcagtctaagtgtagcgcttgcta 50515918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 22486861 - 22486799
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||| |||||||||||||||| || |||||||| || |||||||||||||||    
T  22486861 cctattttcacaagtt-gtcgcttgcaaacttggtctttttctatataggtttagcgcttgcta 22486799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 21433652 - 21433594
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttc-ttttctatctaagtttagc 87  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||| |||||||    
T  21433652 aaccctattttcataagtttgtcgcttgcgaatttgttctttttctatctaggtttagc 21433594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 54700686 - 54700620
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||| || || |||||||| ||||||    
T  54700686 aaccctattctcacaagtttgtcacttgcaaacttgtttcttttcaatataggtttagcgtttgcta 54700620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 38888079 - 38888042
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    |||||||||||||||||||||||||||||||| |||||    
T  38888079 aaccctattttcacaagtttgtcgcttgcaaatttgtt 38888042  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13085210 - 13085178
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  13085210 acccttattttgataggtttgtcgcttgcaacc 13085178  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 9260573 - 9260610
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  9260573 aaccctattttcgcaagtttgtcgtttgcaaacttgtt 9260610  T

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Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 13990766 - 13990729
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgtt 67  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  13990766 aaccctattttcacaagtttgttacttgcaaacttgtt 13990729  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22716629 - 22716661
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaacc 33  Q
    |||||| ||||||||||||||||||||||||||    
T  22716629 accctttttttgataggtttgtcgcttgcaacc 22716661  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 31255384 - 31255336
Alignment:
Q  135 caaaggagactctccatcatcttccttcatttcaaaatttgacacatct 183  Q
    ||||||| ||||||||||  |||||||||||| | ||||||||||||||    
T  31255384 caaaggatactctccatctccttccttcatttgacaatttgacacatct 31255336  T

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Target: scaffold0110 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45380 - 45262
Alignment:
Q  1 acccttattttgataggtttgtcgcttgcaaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccct 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  45380 acccttattttgataggtttgtcgcttgcaaccttattttcataagtttgtcgcttgcaaacttgttctttcttatctaattttagcgcttgctaaccct 45281  T
Q  101 acgcttccgtactgcgtca 119  Q
    |||||||||||||| ||||    
T  45280 acgcttccgtactgtgtca 45262  T

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Target: scaffold0110; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 46806 - 46733
Alignment:
Q  46 gtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgctaaccctacgcttccgtactgcgtca 119  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  46806 gtttgtcgcttgcaaacttgttcttttctatctaggtttagcgcttgctcaccctacgcttccgtactgcgtca 46733  T

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Target: scaffold0054 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 37714 - 37772
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgctt 91  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  37714 cctattttcataagtttgtcgcttgcaaacttgttcttttcaatctaggtttagcgctt 37772  T

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Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 49322 - 49371
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatcta 79  Q
    ||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  49322 aaccctattttcataagtttgtcgcttgcaaacttgttcttctcaatcta 49371  T

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Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 16051 - 16109
Alignment:
Q  34 ctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttg 92  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  16051 ctattttcagatgtttgtcacttgcaaacttgttcttttctatctaggtttagcacttg 16109  T

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Target: scaffold0240; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 1658 - 1723
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||| |||||| |||||||||||| |||||||||||||  |||| ||||| ||||| |||||||||    
T  1658 aaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgcta 1723  T

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Target: scaffold0240; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 14850 - 14912
Alignment:
Q  33 cctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||||||||||| |||||||| ||||| ||  |||| ||| | |||||||||||||||    
T  14850 cctattttcacaagtttttcgcttgccaacttatttatttcaatcaaggtttagcgcttgcta 14912  T

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Target: scaffold0251 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 9702 - 9769
Alignment:
Q  30 aaccctattttcacaagttt--gtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||| ||||| ||||| |||||||||    
T  9702 aaccctattttcacaagtgttagtcgcttggaaacttgttcttttcaatctaggtttaccgcttgcta 9769  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 145734 - 145800
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttg-ttcttttctatctaagtttagcgcttgcta 95  Q
    ||||||||||| ||||| |||||||||||||||||| || ||||| ||||| |||||||| ||||||    
T  145734 aaccctatttttacaagcttgtcgcttgcaaacttgatttttttcaatctaggtttagcgattgcta 145800  T

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Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 17640 - 17705
Alignment:
Q  30 aaccctattttcacaagtttgtcgcttgcaaacttgttcttttctatctaagtttagcgcttgcta 95  Q
    |||| |||||| |||||||||||| |||||||||||||  |||| ||||| ||||| |||||||||    
T  17640 aaccatattttgacaagtttgtcgtttgcaaacttgtttctttcaatctaggtttaacgcttgcta 17705  T

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Target: scaffold0531 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 11672 - 11635
Alignment:
Q  35 tattttcacaagtttgtcgcttgcaaacttgttctttt 72  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  11672 tattttcacaagtttgtcacttgcaaactttttctttt 11635  T

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