View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12448_high_18 (Length: 209)

Name: NF12448_high_18
Description: NF12448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12448_high_18
NF12448_high_18
[»] chr7 (35 HSPs)
chr7 (1-93)||(33691477-33691569)
chr7 (1-93)||(13880419-13880511)
chr7 (5-93)||(23279791-23279879)
chr7 (1-67)||(9709610-9709676)
chr7 (3-93)||(30026208-30026298)
chr7 (1-67)||(14426829-14426895)
chr7 (1-67)||(15469782-15469848)
chr7 (3-93)||(22577771-22577862)
chr7 (6-93)||(28409354-28409441)
chr7 (1-67)||(48236711-48236777)
chr7 (3-63)||(15088806-15088866)
chr7 (1-66)||(16111660-16111726)
chr7 (1-67)||(16542814-16542880)
chr7 (1-67)||(16622782-16622848)
chr7 (1-67)||(28622143-28622209)
chr7 (1-67)||(33606002-33606068)
chr7 (3-93)||(2500342-2500432)
chr7 (1-66)||(12174102-12174167)
chr7 (1-66)||(35952449-35952514)
chr7 (1-52)||(2913413-2913464)
chr7 (29-93)||(9069916-9069980)
chr7 (1-43)||(30944157-30944199)
chr7 (6-93)||(44467370-44467457)
chr7 (3-93)||(4494790-4494880)
chr7 (3-52)||(16316368-16316417)
chr7 (3-93)||(14193392-14193486)
chr7 (1-52)||(10882965-10883016)
chr7 (1-93)||(13649014-13649106)
chr7 (1-52)||(13730502-13730553)
chr7 (1-52)||(29935170-29935221)
chr7 (3-93)||(11793224-11793314)
chr7 (3-93)||(12366501-12366591)
chr7 (3-52)||(13137716-13137765)
chr7 (3-52)||(21695687-21695736)
chr7 (3-52)||(48800433-48800482)
[»] chr2 (19 HSPs)
chr2 (1-93)||(22317925-22318017)
chr2 (3-93)||(38781695-38781785)
chr2 (1-93)||(23235320-23235412)
chr2 (8-93)||(13963705-13963790)
chr2 (1-67)||(20151771-20151837)
chr2 (3-93)||(30621502-30621592)
chr2 (3-93)||(30624123-30624213)
chr2 (3-52)||(30667304-30667353)
chr2 (3-67)||(9015092-9015156)
chr2 (1-52)||(25829417-25829468)
chr2 (1-67)||(28700932-28700999)
chr2 (1-67)||(28711433-28711500)
chr2 (1-65)||(6573861-6573925)
chr2 (1-52)||(20568485-20568536)
chr2 (1-66)||(31327677-31327743)
chr2 (1-66)||(31334398-31334464)
chr2 (3-52)||(18376673-18376722)
chr2 (1-90)||(25036966-25037055)
chr2 (1-90)||(25041073-25041162)
[»] chr1 (19 HSPs)
chr1 (1-93)||(32785622-32785714)
chr1 (3-93)||(22599851-22599941)
chr1 (3-93)||(36134494-36134584)
chr1 (1-93)||(22427028-22427120)
chr1 (6-67)||(2268851-2268912)
chr1 (3-93)||(22154194-22154284)
chr1 (1-67)||(39200720-39200786)
chr1 (3-93)||(16234981-16235071)
chr1 (1-52)||(1578151-1578202)
chr1 (1-67)||(2835008-2835075)
chr1 (1-67)||(2267374-2267440)
chr1 (1-67)||(29216101-29216167)
chr1 (1-52)||(1900651-1900702)
chr1 (1-67)||(25448228-25448295)
chr1 (1-66)||(2327104-2327170)
chr1 (1-67)||(22464486-22464553)
chr1 (1-52)||(28492146-28492197)
chr1 (10-67)||(35402146-35402203)
chr1 (3-43)||(20954174-20954214)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-67)||(19353-19419)
[»] chr8 (18 HSPs)
chr8 (1-67)||(21933212-21933278)
chr8 (3-67)||(16189312-16189376)
chr8 (7-66)||(16207572-16207631)
chr8 (1-93)||(18120872-18120964)
chr8 (1-93)||(22745781-22745873)
chr8 (1-67)||(17441597-17441663)
chr8 (1-67)||(23185016-23185082)
chr8 (1-67)||(30421216-30421282)
chr8 (3-93)||(20382144-20382234)
chr8 (1-67)||(1237979-1238046)
chr8 (9-66)||(9320906-9320963)
chr8 (3-52)||(17267784-17267833)
chr8 (1-67)||(15335815-15335882)
chr8 (1-67)||(15424880-15424947)
chr8 (1-67)||(15516184-15516251)
chr8 (1-52)||(39693846-39693897)
chr8 (6-93)||(602483-602570)
chr8 (3-93)||(24646650-24646740)
[»] scaffold0023 (1 HSPs)
scaffold0023 (3-93)||(103877-103967)
[»] chr4 (21 HSPs)
chr4 (3-93)||(37435228-37435318)
chr4 (1-67)||(10073235-10073301)
chr4 (1-67)||(13575877-13575943)
chr4 (3-93)||(56034873-56034963)
chr4 (1-67)||(3497946-3498012)
chr4 (3-93)||(12810901-12810991)
chr4 (3-93)||(45833710-45833800)
chr4 (3-67)||(14604640-14604704)
chr4 (1-93)||(19620799-19620891)
chr4 (1-67)||(3793403-3793469)
chr4 (1-67)||(54680210-54680276)
chr4 (1-52)||(3395938-3395989)
chr4 (1-52)||(12601413-12601464)
chr4 (1-67)||(29121686-29121753)
chr4 (1-52)||(9141175-9141226)
chr4 (12-67)||(22675283-22675338)
chr4 (1-67)||(16853792-16853858)
chr4 (1-67)||(55732107-55732173)
chr4 (3-52)||(29680306-29680355)
chr4 (7-67)||(17247579-17247639)
chr4 (3-51)||(55380557-55380605)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-93)||(8008-8100)
[»] chr6 (26 HSPs)
chr6 (1-67)||(32544587-32544653)
chr6 (6-92)||(19689040-19689126)
chr6 (3-93)||(21625419-21625509)
chr6 (1-93)||(18435893-18435985)
chr6 (1-93)||(26971948-26972040)
chr6 (1-67)||(22802444-22802510)
chr6 (3-89)||(13435853-13435939)
chr6 (7-67)||(16264930-16264990)
chr6 (3-67)||(34451448-34451512)
chr6 (1-93)||(15531361-15531453)
chr6 (1-67)||(21235416-21235482)
chr6 (3-67)||(20730484-20730548)
chr6 (1-52)||(13602474-13602525)
chr6 (1-67)||(15955006-15955073)
chr6 (1-66)||(20487666-20487731)
chr6 (1-67)||(29918320-29918388)
chr6 (3-67)||(14100237-14100301)
chr6 (1-52)||(9718162-9718213)
chr6 (1-67)||(19832764-19832831)
chr6 (9-67)||(16877542-16877600)
chr6 (1-43)||(18378572-18378614)
chr6 (1-62)||(139136-139197)
chr6 (1-62)||(147157-147218)
chr6 (3-52)||(15987515-15987564)
chr6 (3-52)||(19086471-19086520)
chr6 (3-52)||(19624283-19624332)
[»] chr3 (29 HSPs)
chr3 (1-67)||(18121396-18121462)
chr3 (1-67)||(47208028-47208094)
chr3 (94-178)||(25631909-25631993)
chr3 (1-93)||(28582425-28582517)
chr3 (1-67)||(50300536-50300602)
chr3 (3-93)||(52920725-52920815)
chr3 (1-93)||(31303707-31303799)
chr3 (1-67)||(11869404-11869470)
chr3 (1-63)||(20627258-20627320)
chr3 (1-67)||(2561492-2561564)
chr3 (7-67)||(14969638-14969698)
chr3 (3-67)||(38177464-38177527)
chr3 (1-67)||(40800144-40800210)
chr3 (1-63)||(47405230-47405292)
chr3 (3-93)||(49553237-49553328)
chr3 (3-93)||(6091052-6091142)
chr3 (1-66)||(33583580-33583645)
chr3 (1-66)||(33598200-33598265)
chr3 (1-52)||(41495292-41495343)
chr3 (1-67)||(11223865-11223931)
chr3 (3-67)||(12726038-12726102)
chr3 (3-55)||(13824354-13824406)
chr3 (1-52)||(13948654-13948705)
chr3 (1-67)||(53056502-53056569)
chr3 (3-93)||(14392755-14392845)
chr3 (3-52)||(15903519-15903568)
chr3 (3-52)||(37467622-37467671)
chr3 (3-52)||(49642569-49642618)
chr3 (1-64)||(29855744-29855808)
[»] chr5 (14 HSPs)
chr5 (3-93)||(7745393-7745483)
chr5 (1-67)||(5430183-5430249)
chr5 (1-67)||(31118175-31118241)
chr5 (1-66)||(33022963-33023028)
chr5 (1-52)||(17815282-17815333)
chr5 (1-52)||(21910841-21910892)
chr5 (3-93)||(20551178-20551269)
chr5 (1-61)||(33933617-33933678)
chr5 (1-52)||(6512235-6512286)
chr5 (1-43)||(14086333-14086375)
chr5 (1-43)||(26784656-26784698)
chr5 (3-52)||(89224-89273)
chr5 (3-52)||(21072028-21072077)
chr5 (1-67)||(15517285-15517353)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-93)||(143409-143501)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-67)||(89797-89863)
[»] scaffold0005 (1 HSPs)
scaffold0005 (3-67)||(212674-212738)
[»] scaffold1359 (1 HSPs)
scaffold1359 (1-67)||(414-480)
[»] scaffold1331 (1 HSPs)
scaffold1331 (1-67)||(336-402)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-67)||(22979-23045)
[»] scaffold0411 (1 HSPs)
scaffold0411 (3-93)||(12531-12621)
[»] scaffold0171 (1 HSPs)
scaffold0171 (3-93)||(27145-27235)
[»] scaffold0485 (1 HSPs)
scaffold0485 (3-67)||(9103-9166)
[»] scaffold0334 (1 HSPs)
scaffold0334 (3-93)||(10114-10204)
[»] scaffold0116 (1 HSPs)
scaffold0116 (6-67)||(20697-20758)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-93)||(60334-60426)
scaffold0026 (1-52)||(8215-8266)
[»] scaffold0359 (1 HSPs)
scaffold0359 (7-93)||(5391-5478)
[»] scaffold0161 (1 HSPs)
scaffold0161 (3-93)||(9838-9927)
[»] scaffold0120 (2 HSPs)
scaffold0120 (3-93)||(36476-36566)
scaffold0120 (3-93)||(42439-42529)
[»] scaffold0022 (2 HSPs)
scaffold0022 (3-52)||(39732-39781)
scaffold0022 (3-52)||(137792-137841)
[»] scaffold0479 (1 HSPs)
scaffold0479 (3-67)||(10257-10321)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-93)||(6408-6501)
[»] scaffold0084 (2 HSPs)
scaffold0084 (1-53)||(49636-49688)
scaffold0084 (1-52)||(32791-32842)
[»] scaffold0043 (1 HSPs)
scaffold0043 (7-67)||(78090-78150)
[»] scaffold0861 (1 HSPs)
scaffold0861 (6-53)||(4687-4734)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-52)||(794-845)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-52)||(13930-13981)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-52)||(25733-25784)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-67)||(215206-215273)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-52)||(30612-30663)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-59)||(1949-2007)
[»] scaffold0290 (1 HSPs)
scaffold0290 (3-52)||(18362-18411)


Alignment Details
Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33691569 - 33691477
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||    
T  33691569 ttaaacttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaatttttgtctatggtcctgtacacttg 33691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13880419 - 13880511
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||||||       |||||||||||||||||||    
T  13880419 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaatttatgtctatggtcctgtacacttg 13880511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 23279879 - 23279791
Alignment:
Q  5 gcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||    
T  23279879 gcttcctttttgttgattcttttgctctctattgttcttccagaacctttttatgatgtcaaatttttgtctatggtcctgtacacttg 23279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9709676 - 9709610
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  9709676 ttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgtcaaa 9709610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 30026208 - 30026298
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||| |||||| |||||||| || ||||| ||||||||||||||       |||||||||||||||||||    
T  30026208 aagcttcctttttgttgattcctttgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 30026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14426829 - 14426895
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  14426829 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 14426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15469782 - 15469848
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||| | ||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  15469782 ttaagcttcgtatttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaa 15469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 22577862 - 22577771
Alignment:
Q  3 aagcttcctttttgttgattcattttctct-ctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||||| |||| || |||||||| |||||||| ||||||||||||||       |||||||| ||||||||||    
T  22577862 aagcttcctttttgttgattcatttgctctccttttgttcttccagaacctatttaagatgtcaaatttttttctatggtcatgtacacttg 22577771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 28409354 - 28409441
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||| ||||||||| |||||| |||||||| |||||||| ||||||||||||||       ||||||||| |||||||||    
T  28409354 cttcctttttgtcgattcatttgctctcttttgttcttacagaacctatttaagatgtcaaatttttgtctatggtccagtacacttg 28409441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48236777 - 48236711
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  48236777 ttaagcttcctttttgttgattcctttactctttattgttcttccaagacctttttaagatgtcaaa 48236711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 15088806 - 15088866
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 63  Q
    ||||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||    
T  15088806 aagcttcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgt 15088866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16111726 - 16111660
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaa 66  Q
    ||||||||||||||||||||||| |||||||| |||||||||| | ||| | |||||||||||||||    
T  16111726 ttaagcttcctttttgttgattccttttctctttattgttcttccaagaccttttttaagatgtcaa 16111660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16542880 - 16542814
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| ||||    
T  16542880 ttaagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatgacaaa 16542814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16622782 - 16622848
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| ||||    
T  16622782 ttaagcttcctttttgttgattcctttgctctttattgttcttccaacacctttttaagatgacaaa 16622848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28622209 - 28622143
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  28622209 ttaagcttcatttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 28622143  T

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Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33606002 - 33606068
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||| |||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  33606002 ttaagcttccttattgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 33606068  T

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Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 2500342 - 2500432
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||  |||||| |||||||| || ||||| ||||||||||||||       |||||||| ||||||||||    
T  2500342 aagcttcctttttgttgattccttagctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcttgtacacttg 2500432  T

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Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12174167 - 12174102
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  12174167 ttaagcttcttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 12174102  T

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Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35952514 - 35952449
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||   |||||||||||||||||    
T  35952514 ttaagcttcctttttgttgattcctttgctctttattgttcttccaaggcctttttaagatgtcaa 35952449  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2913464 - 2913413
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  2913464 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 2913413  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 9069916 - 9069980
Alignment:
Q  29 ctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||| | |||||||||||||||||||||||       |||||||||||||||||||    
T  9069916 ctctctattgttcatccagaacctttttaagatgtcaaatttttgtctatggtcctgtacacttg 9069980  T

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Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30944199 - 30944157
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctt 43  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  30944199 ttaagcttcctttttgttgattcatttgctctttattgttctt 30944157  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 44467370 - 44467457
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||  || |||| | |||||||| |||||||| |||| |||||||||       |||||||||||||||||||    
T  44467370 cttcctttttgttgattccattgctctattttgttcttccagaacctatttatgatgtcaaatttttgtctatggtcctgtacacttg 44467457  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 4494790 - 4494880
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||   || |||||| | |||||| |||||||| ||||||||||||||       |||||||||| ||||||||    
T  4494790 aagcttcctttttgttgatttcattgctctctttcgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctatacacttg 4494880  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 16316417 - 16316368
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||||||    
T  16316417 aagcttcctttttgttgattccttagctctcttttgttctttcagaacct 16316368  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 14193392 - 14193486
Alignment:
Q  3 aagcttcctttttgttgattc----attttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||| |||||||||||||    |||  |||||| |||||||| |||||||||||||||||||||||       |||||||| ||||||||||    
T  14193392 aagcttcatttttgttgattctttaattagctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatggtcttgtacacttg 14193486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10883016 - 10882965
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||    
T  10883016 ttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacct 10882965  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13649014 - 13649106
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||| |||||||||||||||||| ||| |||||| ||||||||  |||||||  | ||||| |||||       |||||||||||||||||||    
T  13649014 ttaaacttcctttttgttgattcctttgctctcttttgttcttctagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 13649106  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13730553 - 13730502
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  13730553 ttaagtttcctttttgttgattcctttgctctcttttgttcttccagaacct 13730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29935221 - 29935170
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  29935221 ttaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 29935170  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 11793224 - 11793314
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||  |||||| |||||||| | ||||||  | ||||| |||||       |||||||||||||||||||    
T  11793224 aagcttcctttttgttgattccttcgctctcttttgttcttcctgaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 11793314  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 12366591 - 12366501
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| || ||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  12366591 aagcttcctttttgttgattccattgctctctttttttcttccagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 12366501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 13137765 - 13137716
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  13137765 aagcttcctttttgttgattccttacctctcttttgttcttccagaacct 13137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 21695687 - 21695736
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  21695687 aagcttcctttttgttgattccttaactctcttttgttcttccagaacct 21695736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 48800482 - 48800433
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  48800482 aagcttcctttttgttgattccattgctctcttttgttcttccagaacct 48800433  T

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Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22317925 - 22318017
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||||||||       |||||||||||||||||||    
T  22317925 ttaagcttcctttttgttgattcctttgctctctattgttcttctagaacctttttaagatgtcaaatttttgtctatggtcctgtacacttg 22318017  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 38781695 - 38781785
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||| || |||||| |||||||| |||||||||||||||||| ||||       |||||||||||||||||||    
T  38781695 aagcttcctttttgttgattcaattgctctcttttgttcttccagaacctttttaagatgacaaatttttgtctatggtcctgtacacttg 38781785  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23235320 - 23235412
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||| ||||||||||||||| || |||||| ||||||||  ||||||| ||||||||||||||       |||||||||||||||||||    
T  23235320 ttaagcttactttttgttgattcaattgctctcttttgttcttctagaacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 23235412  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 13963790 - 13963705
Alignment:
Q  8 tcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||||||       |||||||| ||||||||||    
T  13963790 tcctttttgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcatgtacacttg 13963705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20151837 - 20151771
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||||||| |||  ||| ||||||||||||||| ||  |||||||||||||||||||    
T  20151837 ttaagcttcctttttgttaattactttgctctctattgttcttccaagacctttttaagatgtcaaa 20151771  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 30621502 - 30621592
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  30621502 aagcttcctttttgttgattccattgctctctattgttcttccagaacctaataaagatatcaaatttatgtctatggtcctgtacacttg 30621592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 30624123 - 30624213
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || ||||||||||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  30624123 aagcttcctttttgttgattccattgctctctattgttcttccagaacctaataaagatatcaaatttatgtctatggtcctgtacacttg 30624213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 30667304 - 30667353
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  30667304 aagcttcctttttgttgattcaattgctctctattgttcttccagaacct 30667353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9015156 - 9015092
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||| |||||||||||| ||| |||||| |||||||| |||||||| |||||||| |||||    
T  9015156 aagcttccattttgttgattcctttgctctcttttgttcttccagaacctatttaagatttcaaa 9015092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25829417 - 25829468
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  25829417 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28700999 - 28700932
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  28700999 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 28700932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28711500 - 28711433
Alignment:
Q  1 ttaagcttccttttt-gttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||| |||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  28711500 ttaagcttccttttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 28711433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6573925 - 6573861
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtca 65  Q
    |||||||||||||||||| |||| ||| ||| ||||||||||| ||  | |||||||||||||||    
T  6573925 ttaagcttcctttttgttaattcctttgctccctattgttcttccaagatctttttaagatgtca 6573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20568536 - 20568485
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  20568536 ttaagcttcctttttgttgattcctttactctcttttgttcttcaagaacct 20568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31327743 - 31327677
Alignment:
Q  1 ttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||| |||||||||||| | ||| |||| |||||||||| ||| ||||||||||||| ||||    
T  31327743 ttaagcttctctttttgttgatgcctttgctctttattgttcttccaggacctttttaagatatcaa 31327677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31334464 - 31334398
Alignment:
Q  1 ttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||| |||||||||||| | ||| |||| |||||||||| ||| ||||||||||||| ||||    
T  31334464 ttaagcttctctttttgttgatgcctttgctctttattgttcttccaggacctttttaagatatcaa 31334398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 18376722 - 18376673
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  18376722 aagcttcctttttgttgattccttagctctcttttgttcttccagaacct 18376673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25037055 - 25036966
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacac 90  Q
    ||||||||| ||||||||||||| ||| |||||| || ||||| ||||||||  | ||||| |||||       ||||||||||||||||    
T  25037055 ttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagatatcaaatttctgtctatggtcctgtacac 25036966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25041162 - 25041073
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacac 90  Q
    ||||||||| ||||||||||||| ||| |||||| || ||||| ||||||||  | ||||| |||||       ||||||||||||||||    
T  25041162 ttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacctaataaagatatcaaatttctgtctatggtcctgtacac 25041073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32785714 - 32785622
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||       ||||||||||||| |||||    
T  32785714 ttaagcttcctttttgttgattcatttgctttctattgttcttccagaacctttttaagatgtcaaatttttgtctatggtcctgtatacttg 32785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 22599941 - 22599851
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||       |||||||||||||||||||    
T  22599941 aagcttcctttttgttgattcatttgctctcttttgttcttccaaaacctttttaagatgtcaaatttttgtctatggtcctgtacacttg 22599851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 36134494 - 36134584
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||       |||||||||||||||||||    
T  36134494 aagcttcctttttgttgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatggtcctgtacacttg 36134584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22427120 - 22427028
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||       | |||||||||||||||||    
T  22427120 ttaagctttctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgtcaaatttttgtcaatggtcctgtacacttg 22427028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 2268851 - 2268912
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  2268851 cttcctttttgatgattcatttgctctcttttgttcttccagaacctttttaagatgtcaaa 2268912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 22154194 - 22154284
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||| ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||       |||||||| ||||||||||    
T  22154194 aagcttcatttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcatgtacacttg 22154284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39200786 - 39200720
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  39200786 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 39200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 16235071 - 16234981
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| |||||||| |||||||||||||| ||| ||||       |||||||||||||||||||    
T  16235071 aagcttcctttttgttgattccattgctctcttttgttcttccagaacctttttaatatgacaaatttttgtctatggtcctgtacacttg 16234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1578151 - 1578202
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  1578151 ttaagcttcctttttgttgattcctttgctctcttttgttctttcagaacct 1578202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2835008 - 2835075
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  2835008 ttaagcttccctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtcaaa 2835075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2267374 - 2267440
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||  |||||||||| ||||||||    
T  2267374 ttaagcttcctttttgttgatttctttactctctattgttcttccaagacctttttaaaatgtcaaa 2267440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29216101 - 29216167
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| |||  |||||||||||||| ||  ||||||||| |||||||||    
T  29216101 ttaagcttcctttttgttgattcttttgatctctattgttcttccaagacctttttaggatgtcaaa 29216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1900651 - 1900702
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  1900651 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 1900702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25448295 - 25448228
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||| ||  ||||||||||||| |||||    
T  25448295 ttaagcttccctttttgttgattcctttgctctctattgttcttccaagacctttttaagatatcaaa 25448228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2327170 - 2327104
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  2327170 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 2327104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22464553 - 22464486
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttc-agaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| | |||   ||||||||||||||||    
T  22464553 ttaagcttcctttttgttgattcctttgctctatattgttcttccaagactttttttaagatgtcaaa 22464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28492197 - 28492146
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||||||||||||||||  ||||| || ||||| ||||||||    
T  28492197 ttaagcttcctttttgttgattcatttgttctcttttattcttccagaacct 28492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 35402146 - 35402203
Alignment:
Q  10 ctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||  || |||||| |||||||| || ||||||||||||||| ||||    
T  35402146 ctttttgttgattccattgctctcttttgttcttccataacctttttaagatgacaaa 35402203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 20954214 - 20954174
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctt 43  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  20954214 aagcttcctttttgttgattcctttgctctcttttgttctt 20954174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19353 - 19419
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  19353 ttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaa 19419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 8e-23; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21933212 - 21933278
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  21933212 ttaagcttcctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaa 21933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 16189312 - 16189376
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||    
T  16189312 aagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaa 16189376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 16207572 - 16207631
Alignment:
Q  7 ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  16207572 ttcctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaa 16207631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18120964 - 18120872
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||| || | ||| |||||       |||||||||||||||||||    
T  18120964 ttaagcttcctttttgttgattcatttgctctcttttgttcttccagaacctattgatgatctcaaatttttgtctatggtcctgtacacttg 18120872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22745781 - 22745873
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||| ||| |||| | |||||||| |||||||| ||||||||||||||       |||| ||||||||||||||    
T  22745781 ttaagcttcctttttgttgattcctttgctcttttttgttcttccagaacctatttaagatgtcaaatttttgtctatcgtcctgtacacttg 22745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17441663 - 17441597
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||| |||||||| ||| |||||| |||||||| |||||||| ||||||||||||||    
T  17441663 ttaagcttccttttcgttgattcctttgctctcttttgttcttccagaacctatttaagatgtcaaa 17441597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23185082 - 23185016
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||  ||||||| ||||||||||||||| || || |||||||||||||||||    
T  23185082 ttaagcttcctttttgttagttcatttgctctctattgttcttccaaaatctttttaagatgtcaaa 23185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30421282 - 30421216
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||||||| |||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  30421282 ttaagcttcctttttgttaattcctttgctctctattgttcttccaagacctttttaagatgtcaaa 30421216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 20382234 - 20382144
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| |||||||||||||||||  | |||||||||||       |||||||||||||||||||    
T  20382234 aagcttcctttttgttgattccattactctcttttgttctttcagaacctaataaagatgtcaaatttttgtctatggtcctgtacacttg 20382144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1237979 - 1238046
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  1237979 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 1238046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 9320906 - 9320963
Alignment:
Q  9 cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  9320906 cctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 9320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17267784 - 17267833
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  17267784 aagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 17267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15335882 - 15335815
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15335882 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15335815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15424947 - 15424880
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15424947 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15424880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15516251 - 15516184
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  15516251 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaa 15516184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39693846 - 39693897
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||| ||||||||||||||||| |||||| | |||||| ||||||||    
T  39693846 ttaagcttcttttttgttgattcatttgctctctttcgttcttccagaacct 39693897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 602570 - 602483
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||| ||  |||||| |||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  602570 cttcctttttgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 24646650 - 24646740
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  ||  | ||| |||||||| || ||||| ||||||||||||||       ||||||||||||| |||||    
T  24646650 aagcttcctttttgttgattccattggtatcttttgttcttccaaaacctatttaagatgtcaaatttttttctatggtcctgtatacttg 24646740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 103877 - 103967
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||       ||| |||||||||||||||    
T  103877 aagcttcctatttgttgattcatttgctctcttttgttctttcagaacctttttaagatgtcaaatttttgtctaaggtcctgtacacttg 103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 37435318 - 37435228
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||       |||||||||||||||||||    
T  37435318 aagcttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 37435228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10073235 - 10073301
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  10073235 ttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaa 10073301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13575943 - 13575877
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  13575943 ttaagcttcctttttgttgattcatttgctctctattgttcttccaagacctttttaagatgtcaaa 13575877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 56034873 - 56034963
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||       |||||||| ||||||||||    
T  56034873 aagctttctttttgttgattcatttgctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatggtcatgtacacttg 56034963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3497946 - 3498012
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  3497946 ttaagcttcctttttgttgattcctttgctctatattgttcttccaaaacctttttaagatgtcaaa 3498012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 12810991 - 12810901
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||||||       |||||||||||||||||||    
T  12810991 aagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 12810901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 45833710 - 45833800
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||| |||||| |||||||| || ||||||||||||||||||||       |||||||| ||||||||||    
T  45833710 aagcttcctttttgttgattcgtttgctctcttttgttcttccaaaacctttttaagatgtcaaatttttgtctatggtcatgtacacttg 45833800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 14604704 - 14604640
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||    
T  14604704 aagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgtcaaa 14604640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19620891 - 19620799
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  19620891 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 19620799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3793403 - 3793469
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||| |||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  3793403 ttaagctttctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 3793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54680210 - 54680276
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| ||||    
T  54680210 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgacaaa 54680276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3395938 - 3395989
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  3395938 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 3395989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12601413 - 12601464
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  12601413 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 12601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29121686 - 29121753
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  29121686 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 29121753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9141175 - 9141226
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| || |||||    
T  9141175 ttaagcttcctttttgttgattcctttgctctcttttgttcttccataacct 9141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 22675338 - 22675283
Alignment:
Q  12 ttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||| ||| ||||||||||||||| ||  |||| ||||||||||||||    
T  22675338 ttttgttgattcctttgctctctattgttcttccaagacctctttaagatgtcaaa 22675283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16853792 - 16853858
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||  |||||||||  |  ||||||||||||| |||||    
T  16853792 ttaagcttcctttttgttgattcctttgctcttaattgttcttcaaagacctttttaagatatcaaa 16853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 55732107 - 55732173
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| |||||||||||  ||| |||| |||||||||| ||  ||||||||||||| |||||    
T  55732107 ttaagcttcccttttgttgatttctttgctctttattgttcttccaagacctttttaagatatcaaa 55732173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 29680355 - 29680306
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  29680355 aagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 29680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 17247579 - 17247639
Alignment:
Q  7 ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||| ||| |||| | |||||||| ||  ||||||||| |||||||||    
T  17247579 ttcctttttgttgattcctttgctctttgttgttcttccaagacctttttaggatgtcaaa 17247639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 55380557 - 55380605
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacc 51  Q
    ||||||||||||||||||||| ||  |||||| ||||| ||||||||||    
T  55380557 aagcttcctttttgttgattccttagctctcttttgttttttcagaacc 55380605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8008 - 8100
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||    
T  8008 ttaagctttctttttgttgattcctttgctctctattgttcttccagaacctttttaagatgtcaaagttttgtctatgatcctgtacacttg 8100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32544587 - 32544653
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||    
T  32544587 ttaagcttcctttttgttgattcctttgctctctattgttcttccataacctttttaagatgtcaaa 32544653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 19689040 - 19689126
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacactt 92  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||       ||||||||||||||||||    
T  19689040 cttcctttttgttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctgtacactt 19689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 21625419 - 21625509
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||| |||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||       |||||||||||||||||||    
T  21625419 aagcttcctatttgttgattcattttctctcttttgttcttcgagaacctttctaagatgtcaaatttttgtctatggtcctgtacacttg 21625509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18435893 - 18435985
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||  || ||||||||||| ||||       |||||||||||||||||||    
T  18435893 ttaagcttcctttttgttgattccttttctctctattgttcttccaatacatttttaagatgacaaatttttgtctatggtcctgtacacttg 18435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26972040 - 26971948
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||| ||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||        ||||||||||||||||||    
T  26972040 ttaagattcctttttgttgattcctttgctctccattgttcttccagaacctttttaagatgtcaaatttttgtttatggtcctgtacacttg 26971948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22802444 - 22802510
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  22802444 ttaagcttcctttttgttgattcctttcctctctattgttcttccaagacctttttaagatgtcaaa 22802510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 13435853 - 13435939
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtaca 89  Q
    |||||||||||||||||||||  || |||||| ||||||||||||||||| ||||||||||||||       |||||||||||||||    
T  13435853 aagcttcctttttgttgattccattgctctcttttgttctttcagaacctatttaagatgtcaaatttttgtctatggtcctgtaca 13435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 16264990 - 16264930
Alignment:
Q  7 ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||    
T  16264990 ttcctttttgttgattcctttgctctctattgttctttcaagacctttttaagatgtcaaa 16264930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 34451512 - 34451448
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||| |||||| ||| |||||| |||||||| |||||||||||||||||||||||    
T  34451512 aagcttcctttttgctgattcctttgctctcttttgttcttccagaacctttttaagatgtcaaa 34451448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15531453 - 15531361
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||| |||||||||||||||||| |||| | ||||| || |||||| ||||||||||||||||       |||||||||||||||||||    
T  15531453 ttaagctttctttttgttgattcatttgctcttttttgttattccagaacttttttaagatgtcaaatttttatctatggtcctgtacacttg 15531361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21235416 - 21235482
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  21235416 ttaagcttcctttttgtagattcctttgctctctattgttcttccaagacctttttaagatgtcaaa 21235482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 20730548 - 20730484
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||  ||| ||||||||||||||| ||  |||||||||||||||||||    
T  20730548 aagcttcctttttgttgatttctttgctctctattgttcttccaagacctttttaagatgtcaaa 20730484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13602474 - 13602525
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  13602474 ttaagcttcctttttgttgattccttttctctcttttgttcttccagaacct 13602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15955006 - 15955073
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  15955006 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 15955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20487731 - 20487666
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||| ||||||||||||| ||| || | |||||||||| ||  ||||||||||||||||||    
T  20487731 ttaagcttcttttttgttgattcctttgctttttattgttcttccaagacctttttaagatgtcaa 20487666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29918320 - 29918388
Alignment:
Q  1 ttaagcttcctt--tttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||  ||||||||||| ||| ||||||||| ||||| ||  |||||||||||||||||||    
T  29918320 ttaagcttccttgatttgttgattcctttgctctctattattcttccaagacctttttaagatgtcaaa 29918388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 14100301 - 14100237
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||| || |||||    
T  14100301 aagcttcctttttgttgattccattgctctcttttgttcttccagaacctatttaatatatcaaa 14100237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9718162 - 9718213
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  9718162 ttaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 9718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19832831 - 19832764
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctcta-ttgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||||||||||  |||| |||| || |||||||| ||  |||||||||||||||||||    
T  19832831 ttaagcttcctttttgttgatgtatttgctctttatttgttcttccaagacctttttaagatgtcaaa 19832764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 16877542 - 16877600
Alignment:
Q  9 cctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| |||| ||| |||| |||||||||| ||| ||||||||||||| |||||    
T  16877542 cctttttgttaattcctttgctctttattgttcttccaggacctttttaagatatcaaa 16877600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18378572 - 18378614
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctt 43  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||    
T  18378572 ttaagcttcctttttgttgattcctttactctcttttgttctt 18378614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 139197 - 139136
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 62  Q
    |||||||| |||||||||||||| ||| |||| ||||||||||  |  ||||||||||||||    
T  139197 ttaagctttctttttgttgattcctttgctctttattgttcttctaagacctttttaagatg 139136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 147218 - 147157
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatg 62  Q
    |||||||| |||||||||||||| ||| |||| ||||||||||  |  ||||||||||||||    
T  147218 ttaagctttctttttgttgattcctttgctctttattgttcttctaagacctttttaagatg 147157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 15987515 - 15987564
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| ||||| |||||||||||    
T  15987515 aagcttcctttttgttgattccttagctctcttttgttttttcagaacct 15987564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 19086471 - 19086520
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  19086471 aagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19086520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 19624283 - 19624332
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  19624283 aagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18121462 - 18121396
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18121462 ttaagcttcatttttgttgcttcatttgctctctattgttcttccagaacctttttaagatgtcaaa 18121396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47208028 - 47208094
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  47208028 ttaagcttcctttttgttgattcatttgctctctattgttcttccaatacctttttaagatgtcaaa 47208094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 25631909 - 25631993
Alignment:
Q  94 ttcattattttgcttttgatctctgcattatactcaacattgaatttgcagtgtagaatagtgaaggtggttgctacctgctggt 178  Q
    ||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||||| | | ||| ||||||||||| ||||    
T  25631909 ttcatgattttgcttttactctctgcattatactcaacatcgaatttgcagtgtagaataataacggtcgttgctacctggtggt 25631993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28582425 - 28582517
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||| |||||       |||||||| ||||||||||    
T  28582425 ttaagcttcctttttgttgatttctttactctctattgttcttccagaacctttttaagatttcaaatttttgtctatggtcatgtacacttg 28582517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50300536 - 50300602
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| || ||||||||||||||||||||    
T  50300536 ttaagcttcctttttgttgattcctttgctctttattgttcttccaaaacctttttaagatgtcaaa 50300602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 52920725 - 52920815
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||       ||||| |||||||||||||    
T  52920725 aagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgtcaaatttttgtctatgatcctgtacacttg 52920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31303707 - 31303799
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||| || ||||||||||||||       |||||||| ||||||||||    
T  31303707 ttaagcttcctttttgttgattcttttgctctcttttgttcttccagaaactatttaagatgtcaaatttttgtctatggtcatgtacacttg 31303799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11869404 - 11869470
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  11869404 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 11869470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20627320 - 20627258
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 63  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||    
T  20627320 ttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgt 20627258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2561492 - 2561564
Alignment:
Q  1 ttaagcttcctttttgttgattcattttc------tctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||||||| |      |||||||||||||| |||||||||||||||||||||||    
T  2561492 ttaagcttcctttttgttgattcatttgcatttgctctctattgttcttccagaacctttttaagatgtcaaa 2561564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 14969638 - 14969698
Alignment:
Q  7 ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||| |||||  |||||||| || ||||||||||||||||||||    
T  14969638 ttcctttttgttgattcatttgctctcgtttgttcttccataacctttttaagatgtcaaa 14969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 38177527 - 38177464
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||||||||||    
T  38177527 aagcttcctttttgttgattcatttgctct-tttttttcttccagaacctttttaagatgtcaaa 38177464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40800144 - 40800210
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||| ||  |||||||||||||||||||    
T  40800144 ttaagcttcctttttgttgatttctttgctctctattattcttccaagacctttttaagatgtcaaa 40800210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47405292 - 47405230
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgt 63  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||  || ||||||||||||    
T  47405292 ttaagcttcctttttgttgattcctttgctctctattgttcttccaagacgtttttaagatgt 47405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 49553328 - 49553237
Alignment:
Q  3 aagcttcctttttgttgattcattttctct-ctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||||||| |||| || |||||||| |||||| | ||||||||||||||       |||||||| ||||||||||    
T  49553328 aagcttcctttttgttgattcatttgctctcctgttgttcttccagaacttatttaagatgtcaaatttttgtctatggtcatgtacacttg 49553237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 6091052 - 6091142
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||| ||||||||||||   || |||||| |||||||| |||||||| ||||||||||||||       |||||||||||||||||||    
T  6091052 aagcttcatttttgttgatttcattgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 6091142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33583580 - 33583645
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    |||| |||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  33583580 ttaaacttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33583645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33598200 - 33598265
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    |||| |||||||||||||||||| ||| |||| |||||||||| ||  ||||||||||||||||||    
T  33598200 ttaaacttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaa 33598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41495292 - 41495343
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  41495292 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 41495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11223865 - 11223931
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||| |||||||||||||||||| ||| |||| |||| ||||| ||  |||||||||||||||||||    
T  11223865 ttaaacttcctttttgttgattcctttgctctttattattcttccaagacctttttaagatgtcaaa 11223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 12726102 - 12726038
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||| ||||||| ||   ||||| |||||||| |||||||| ||||||||||||||    
T  12726102 aagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaa 12726038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 13824354 - 13824406
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttt 55  Q
    |||||||||||||||||||||  || |||||| |||||||| |||||||||||    
T  13824354 aagcttcctttttgttgattccattgctctcttttgttcttccagaacctttt 13824406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13948654 - 13948705
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  13948654 ttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 13948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 53056569 - 53056502
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| || | |||||||||| ||  |||||||||||||||||||    
T  53056569 ttaagcttccctttttgttgattcctttgctttttattgttcttccaagacctttttaagatgtcaaa 53056502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 14392845 - 14392755
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||| ||||||||| ||  |||||| |||||||| ||||||||  | ||||| |||||       |||||||||||||||||||    
T  14392845 aagcttcctttctgttgattccttagctctcttttgttcttccagaacctaataaagatatcaaatttttgtctatggtcctgtacacttg 14392755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 15903519 - 15903568
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  15903519 aagcttcctttttgttgattccattgctctcttttgttcttccagaacct 15903568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 37467622 - 37467671
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||||||||||  ||  ||||| |||||||||||||||||    
T  37467622 aagcttcctttttgttgattccattgttctcttttgttctttcagaacct 37467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 49642618 - 49642569
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||||||||||  || |||||| |||||||| ||||||||    
T  49642618 aagcttcctttttgttgattccattgctctcttttgttcttccagaacct 49642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29855744 - 29855808
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtc 64  Q
    |||||||||| ||||||||||||| |||  ||| |||||||||| ||  ||||||||||||||||    
T  29855744 ttaagcttccctttttgttgattcctttgttctttattgttcttccaagacctttttaagatgtc 29855808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 7745483 - 7745393
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||       ||||||| |||||||||||    
T  7745483 aagcttcctttttgttgatccatttgctctcttttgttctttcagaacctatttaagatgtcaaatttttgtctatggttctgtacacttg 7745393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5430183 - 5430249
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  5430183 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 5430249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31118175 - 31118241
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  31118175 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 31118241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33022963 - 33023028
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaa 66  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||| ||  ||||||||||||||||||    
T  33022963 ttaagcttcctttttgttgattcctttgctctcgattgttcttccaagacctttttaagatgtcaa 33023028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17815282 - 17815333
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  17815282 ttaagcttcctttttgttgattcctttactctcttttgttcttccagaacct 17815333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21910841 - 21910892
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  21910841 ttaagcttcctttttgttgattcatttgctctcttttgttcttctagaacct 21910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 20551178 - 20551269
Alignment:
Q  3 aagcttcctttt-tgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||| |||||||||  || |||||| |||||||| |||||||| ||||||||||||||       |||||||||| ||||||||    
T  20551178 aagcttccttttttgttgattccattgctctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctctacacttg 20551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33933617 - 33933678
Alignment:
Q  1 ttaagcttc-ctttttgttgattcattttctctctattgttctttcagaacctttttaagat 61  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| ||  |||||||||||||    
T  33933617 ttaagcttctctttttgttgattcctttgctctctattgttcttccaagacctttttaagat 33933678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6512286 - 6512235
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||||||| || ||| ||||||||  |||||||    
T  6512286 ttaagcttcctttttgttgattcatttgctatcttttgttcttcaagaacct 6512235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14086375 - 14086333
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctt 43  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||    
T  14086375 ttaagcttcctttttgttgattcctttgctctttattgttctt 14086333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26784656 - 26784698
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctt 43  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||    
T  26784656 ttaagcttcctttttgttgattcctttgctctcttttgttctt 26784698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 89273 - 89224
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||||| |||||||| ||||||||    
T  89273 aagcttcctttttgttgattccttagctctcttttgttcttccagaacct 89224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 21072077 - 21072028
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||  |||| | |||||||||||||||||    
T  21072077 aagcttcctttttgttgattccttagctcttttttgttctttcagaacct 21072028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15517285 - 15517353
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctatt-gttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| |||||||||||  |||| |||| |||| |||||||||  |||||||||||||||||||    
T  15517285 ttaagcttccctttttgttgatgtatttgctctttatttgttctttcaagacctttttaagatgtcaaa 15517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 143409 - 143501
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||       |||||||||| ||||||||    
T  143409 ttaagcttcctttttcttgattcctttgctctctattgttcttccagaacctttttaatatgtcaaatttttgtctatggtcctatacacttg 143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 89863 - 89797
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  89863 ttaagcttcctttttgttgattcctttgctctctattgttcttccaagacctttttaagatgtcaaa 89797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 212674 - 212738
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||||||||    
T  212674 aagcttcctttttgttgattccttagctctcttttgttcttccagaacctttttaagatgtcaaa 212738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 480 - 414
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||||||||    
T  480 ttaagcttcctttttgttgattcctttgctctttattgttcttccaagacctttttaagatgtcaaa 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 402 - 336
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||| ||||||||||| |||| | |||||||| || ||||||||||||||||||||    
T  402 ttaagcttcctttttattgattcatttgctctttgttgttcttccaaaacctttttaagatgtcaaa 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22979 - 23045
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||||||    
T  22979 ttaagcttcatttttgttgattcttttgctctctattgttcttccaagacctttttaagatgtcaaa 23045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 12531 - 12621
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||||||       |||||||| ||||||||||    
T  12531 aagcttcctttttgttgattccattactctcttttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcttgtacacttg 12621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 27235 - 27145
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||||||||||| ||| |||||| ||||| ||||||||||| |||||||||| | |       |||||||||||||||||||    
T  27235 aagcttcctttttgttgattcctttgctctcttttgttatttcagaacctatttaagatgttagatatttttctatggtcctgtacacttg 27145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9166 - 9103
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||| |||||||||||| |||||| |||||||| |||||||| ||||||||||||||    
T  9166 aagcttcctttt-gttgattcatttgctctcttttgttcttccagaacctatttaagatgtcaaa 9103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 10114 - 10204
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| ||||||||||||||||| || ||||| |||||       |||||||| ||||||||||    
T  10114 aagcttcctttttgttgattccattcctctcttttgttctttcagaacctattgaagatatcaaatttttgtctatggtcatgtacacttg 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 20758 - 20697
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||||||||||| ||  |||||| |||||||| |||||||| ||||||||||||||    
T  20758 cttcctttttgttgattccttagctctcttttgttcttccagaacctatttaagatgtcaaa 20697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 60334 - 60426
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||  | | |||||||||       |||||||||||||||||||    
T  60334 ttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacctaataatgatgtcaaatttttgtctatggtcctgtacacttg 60426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8215 - 8266
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||| |||||||||||||| ||| |||||| |||||||| ||||||||    
T  8215 ttaagcttactttttgttgattcctttgctctcttttgttcttccagaacct 8266  T

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Target: scaffold0359 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 5478 - 5391
Alignment:
Q  7 ttcctttttgttgattcattttctctc-tattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||| |||||||||||| ||||| | |||||||| |||||||| ||||||||||||||       |||||||||||||| ||||    
T  5478 ttccttttagttgattcatttgctctcattttgttcttccagaacctatttaagatgtcaaatttttgtctatggtcctgtacgcttg 5391  T

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Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 9927 - 9838
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||||||||||||||  || |||||| |||||||| ||||| || ||||||||||||||        ||||||||||||||||||    
T  9927 aagcttcctttttgttgattccattgctctcttttgttcttccagaa-ctatttaagatgtcaaatttttgtttatggtcctgtacacttg 9838  T

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Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 36566 - 36476
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||  |||||||  || |||||| |||||||| || ||||| ||||||||||||||       |||||||||||||||||||    
T  36566 aagcttccttttatttgattccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 36476  T

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Target: scaffold0120; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 42439 - 42529
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    ||||||||||||  |||||||  || |||||| |||||||| || ||||| ||||||||||||||       |||||||||||||||||||    
T  42439 aagcttccttttatttgattccattgctctcttttgttcttccataacctatttaagatgtcaaatttttgtctatggtcctgtacacttg 42529  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 39732 - 39781
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  39732 aagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 39781  T

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Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 137792 - 137841
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  137792 aagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 137841  T

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Target: scaffold0479 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 10257 - 10321
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||| ||||||| ||   ||||| |||||||| |||||||| ||||||||||||||    
T  10257 aagcttcctttttattgattctttagatctcttttgttcttccagaacctatttaagatgtcaaa 10321  T

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Target: scaffold0439 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6501 - 6408
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaannnnnnnctatggtcctgtacacttg 93  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  ||||||||||||| |||||       |||| ||||||||||||||    
T  6501 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagacctttttaagatatcaaatttttgtctatagtcctgtacacttg 6408  T

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Target: scaffold0084 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49636 - 49688
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctt 53  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| ||| |||||    
T  49636 ttaagcttcctttttgttgattcctttgctctcttttgttcttccagcacctt 49688  T

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Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32791 - 32842
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||  |||||||    
T  32791 ttaagcttcctttttgttgattcctttactctcttttgttcttctagaacct 32842  T

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Target: scaffold0043 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 78150 - 78090
Alignment:
Q  7 ttcctttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    ||||||||||||||||| ||| |||| |||||||||| ||  | |||||||||||||||||    
T  78150 ttcctttttgttgattcctttgctctttattgttcttccaagatctttttaagatgtcaaa 78090  T

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Target: scaffold0861 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 4734 - 4687
Alignment:
Q  6 cttcctttttgttgattcattttctctctattgttctttcagaacctt 53  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  4734 cttcctttttgttgattcctttgctctcttttgttcttccagaacctt 4687  T

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Target: scaffold0771 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 794 - 845
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||||| ||| |||||| ||||| || ||||||||    
T  794 ttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 845  T

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Target: scaffold0426 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13930 - 13981
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||||||| |||||||| ||| |||||| |||||||| ||||||||    
T  13930 ttaagcttccttttcgttgattcctttgctctcttttgttcttccagaacct 13981  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25784 - 25733
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||| |||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  25784 ttaatcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25733  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 215273 - 215206
Alignment:
Q  1 ttaagcttcc-tttttgttgattcattttctctctattgttctttcagaacctttttaagatgtcaaa 67  Q
    |||||||||| ||||||||||||| ||| |||| |||||||||| ||  | |||||||||||||||||    
T  215273 ttaagcttccctttttgttgattcctttgctctttattgttcttccaagatctttttaagatgtcaaa 215206  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30663 - 30612
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    |||||||||| |||||||||||| ||| |||||| |||||||| ||||||||    
T  30663 ttaagcttccattttgttgattcctttgctctcttttgttcttccagaacct 30612  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1949 - 2007
Alignment:
Q  1 ttaagcttcctttttgttgattcattttctctctattgttctttcagaacctttttaag 59  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||| ||| |||| ||||||    
T  1949 ttaagcttcctttttattgattcctttgctctcttttgttcttccaggacctatttaag 2007  T

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Target: scaffold0290 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 18411 - 18362
Alignment:
Q  3 aagcttcctttttgttgattcattttctctctattgttctttcagaacct 52  Q
    ||||||||||||||||||||| ||| |||||| |||||||| || |||||    
T  18411 aagcttcctttttgttgattcctttgctctcttttgttcttccaaaacct 18362  T

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