View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12448_low_17 (Length: 292)

Name: NF12448_low_17
Description: NF12448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12448_low_17
NF12448_low_17
[»] chr7 (48 HSPs)
chr7 (1-275)||(25542232-25542527)
chr7 (1-227)||(1049588-1049814)
chr7 (8-226)||(40837042-40837261)
chr7 (19-226)||(26804345-26804551)
chr7 (1-226)||(35379-35625)
chr7 (1-226)||(44314-44560)
chr7 (1-229)||(27306522-27306770)
chr7 (1-226)||(3878322-3878571)
chr7 (1-120)||(18567491-18567609)
chr7 (1-120)||(31435340-31435458)
chr7 (1-122)||(22392349-22392469)
chr7 (131-226)||(18567363-18567459)
chr7 (131-226)||(31435490-31435586)
chr7 (110-226)||(1047386-1047503)
chr7 (17-98)||(45366446-45366526)
chr7 (1-59)||(22251835-22251893)
chr7 (1-41)||(7092472-7092512)
chr7 (1-44)||(1606423-1606466)
chr7 (1-44)||(22108114-22108157)
chr7 (1-44)||(22137125-22137168)
chr7 (1-44)||(40549874-40549917)
chr7 (1-44)||(40552152-40552195)
chr7 (1-41)||(7094719-7094759)
chr7 (1-44)||(1849918-1849961)
chr7 (1-44)||(2935306-2935349)
chr7 (5-44)||(9027401-9027440)
chr7 (110-226)||(2935070-2935187)
chr7 (110-226)||(9027570-9027687)
chr7 (110-226)||(22136878-22136995)
chr7 (110-226)||(40551905-40552022)
chr7 (1-41)||(7470319-7470359)
chr7 (1-41)||(7472277-7472317)
chr7 (1-44)||(3035670-3035713)
chr7 (1-44)||(7188496-7188539)
chr7 (1-44)||(7349572-7349615)
chr7 (1-44)||(11757177-11757220)
chr7 (1-44)||(20299407-20299450)
chr7 (1-44)||(28485515-28485558)
chr7 (1-44)||(31156204-31156247)
chr7 (1-44)||(38393935-38393978)
chr7 (1-44)||(42331292-42331335)
chr7 (1-44)||(43253817-43253860)
chr7 (13-43)||(9680768-9680798)
chr7 (14-44)||(18345490-18345520)
chr7 (112-190)||(24526366-24526444)
chr7 (1-43)||(25276095-25276137)
chr7 (14-44)||(38396239-38396269)
chr7 (15-71)||(1047239-1047295)
[»] chr8 (39 HSPs)
chr8 (1-228)||(4423833-4424060)
chr8 (1-228)||(12517319-12517567)
chr8 (1-179)||(3886211-3886392)
chr8 (5-226)||(27826782-27827024)
chr8 (5-226)||(27829093-27829335)
chr8 (1-124)||(14807672-14807793)
chr8 (1-226)||(15072506-15072752)
chr8 (1-124)||(28251860-28251981)
chr8 (1-122)||(2468391-2468511)
chr8 (15-226)||(15067777-15068009)
chr8 (110-222)||(28252009-28252122)
chr8 (110-226)||(44720617-44720735)
chr8 (5-71)||(18810680-18810746)
chr8 (110-226)||(18812668-18812785)
chr8 (5-71)||(18812865-18812931)
chr8 (110-222)||(14807552-14807665)
chr8 (48-124)||(44720742-44720816)
chr8 (1-44)||(43530123-43530166)
chr8 (110-226)||(18810483-18810600)
chr8 (1-71)||(44720815-44720885)
chr8 (13-70)||(17847501-17847558)
chr8 (1-44)||(22684959-22685002)
chr8 (110-226)||(43079347-43079464)
chr8 (110-226)||(43081722-43081839)
chr8 (1-44)||(6375988-6376031)
chr8 (1-44)||(181536-181579)
chr8 (1-44)||(13858777-13858820)
chr8 (1-44)||(15809214-15809257)
chr8 (1-44)||(24873480-24873523)
chr8 (1-44)||(26775200-26775243)
chr8 (1-44)||(28283518-28283561)
chr8 (1-44)||(31162212-31162255)
chr8 (1-44)||(32339304-32339347)
chr8 (1-44)||(41382672-41382715)
chr8 (1-43)||(14477276-14477318)
chr8 (1-43)||(21482322-21482364)
chr8 (1-42)||(31035068-31035110)
chr8 (14-44)||(43081957-43081987)
chr8 (15-44)||(43079585-43079614)
[»] chr3 (78 HSPs)
chr3 (1-226)||(11162891-11163116)
chr3 (1-226)||(11170145-11170370)
chr3 (5-226)||(5522910-5523152)
chr3 (1-226)||(1321161-1321407)
chr3 (1-226)||(48361961-48362186)
chr3 (5-226)||(26720268-26720510)
chr3 (5-225)||(5191374-5191615)
chr3 (1-226)||(35777163-35777387)
chr3 (5-226)||(18097196-18097422)
chr3 (1-124)||(10084684-10084806)
chr3 (1-124)||(10191604-10191726)
chr3 (1-226)||(32218836-32219061)
chr3 (5-124)||(22114600-22114718)
chr3 (15-140)||(18162492-18162616)
chr3 (12-122)||(32264345-32264454)
chr3 (5-124)||(3859372-3859490)
chr3 (5-226)||(18099466-18099707)
chr3 (7-226)||(10956324-10956563)
chr3 (64-190)||(6719487-6719614)
chr3 (48-228)||(38889755-38889936)
chr3 (1-164)||(24979511-24979673)
chr3 (7-124)||(10958620-10958736)
chr3 (1-122)||(45882785-45882905)
chr3 (1-169)||(6066088-6066254)
chr3 (5-82)||(15780745-15780822)
chr3 (1-121)||(24177126-24177245)
chr3 (110-228)||(50493674-50493793)
chr3 (1-80)||(12268257-12268336)
chr3 (110-231)||(53896637-53896759)
chr3 (110-190)||(10192413-10192492)
chr3 (1-71)||(38889935-38890002)
chr3 (1-71)||(6719402-6719472)
chr3 (110-226)||(38210067-38210184)
chr3 (110-175)||(10085493-10085557)
chr3 (124-226)||(24176999-24177102)
chr3 (1-71)||(6063739-6063809)
chr3 (131-227)||(32264484-32264581)
chr3 (13-99)||(46966938-46967023)
chr3 (10-71)||(5886181-5886242)
chr3 (10-71)||(5899656-5899717)
chr3 (15-95)||(13893267-13893345)
chr3 (123-226)||(22114738-22114842)
chr3 (1-44)||(4308572-4308615)
chr3 (144-226)||(7606881-7606963)
chr3 (1-44)||(51727297-51727340)
chr3 (1-71)||(53896487-53896557)
chr3 (14-71)||(25388794-25388851)
chr3 (110-189)||(5899497-5899576)
chr3 (5-44)||(25690651-25690690)
chr3 (1-44)||(53597164-53597207)
chr3 (6-71)||(50493895-50493960)
chr3 (8-44)||(27101483-27101519)
chr3 (8-44)||(27101558-27101594)
chr3 (14-70)||(38210265-38210321)
chr3 (1-44)||(746674-746717)
chr3 (1-44)||(1313333-1313376)
chr3 (1-44)||(4104190-4104233)
chr3 (1-44)||(10621833-10621876)
chr3 (1-44)||(23633383-23633426)
chr3 (1-44)||(25533357-25533400)
chr3 (1-44)||(29956587-29956630)
chr3 (1-44)||(30005742-30005785)
chr3 (1-44)||(35918240-35918283)
chr3 (5-44)||(43226009-43226048)
chr3 (5-44)||(43228214-43228253)
chr3 (14-44)||(455826-455856)
chr3 (14-44)||(458203-458233)
chr3 (110-226)||(6063889-6064006)
chr3 (144-190)||(9666947-9666993)
chr3 (13-95)||(26762837-26762919)
chr3 (13-43)||(47149203-47149233)
chr3 (110-170)||(25388654-25388714)
chr3 (15-44)||(42990205-42990234)
chr3 (7-44)||(51943294-51943331)
chr3 (7-44)||(53915793-53915830)
chr3 (7-43)||(4663843-4663879)
chr3 (1-37)||(6561740-6561776)
chr3 (48-124)||(25388721-25388795)
[»] chr4 (76 HSPs)
chr4 (5-226)||(11434769-11434991)
chr4 (1-190)||(22801155-22801342)
chr4 (6-226)||(31849897-31850138)
chr4 (7-226)||(7941133-7941353)
chr4 (1-223)||(5198217-5198460)
chr4 (1-226)||(9148054-9148291)
chr4 (1-124)||(38409117-38409239)
chr4 (5-226)||(22044687-22044930)
chr4 (5-124)||(24888714-24888832)
chr4 (1-226)||(5637762-5638006)
chr4 (2-226)||(36919881-36920125)
chr4 (5-124)||(51015164-51015282)
chr4 (1-124)||(22803027-22803148)
chr4 (1-227)||(36921788-36922034)
chr4 (1-226)||(48486113-48486359)
chr4 (5-124)||(22046982-22047099)
chr4 (5-122)||(24880371-24880487)
chr4 (14-124)||(37089680-37089789)
chr4 (5-124)||(9174443-9174561)
chr4 (13-124)||(11006546-11006656)
chr4 (1-122)||(619740-619860)
chr4 (12-226)||(3824877-3825112)
chr4 (5-122)||(24878909-24879025)
chr4 (1-122)||(47274647-47274767)
chr4 (17-122)||(52942756-52942860)
chr4 (110-222)||(24888594-24888707)
chr4 (110-226)||(38408993-38409110)
chr4 (1-122)||(40091708-40091828)
chr4 (1-112)||(8756543-8756653)
chr4 (110-226)||(18846923-18847042)
chr4 (117-190)||(22803162-22803235)
chr4 (110-226)||(11006663-11006781)
chr4 (144-226)||(22048493-22048575)
chr4 (110-226)||(16932243-16932360)
chr4 (110-227)||(16934597-16934715)
chr4 (110-227)||(22783200-22783318)
chr4 (110-226)||(9176918-9177035)
chr4 (110-226)||(22780835-22780952)
chr4 (64-124)||(9176852-9176911)
chr4 (48-124)||(11008932-11009007)
chr4 (110-221)||(52942890-52943002)
chr4 (1-44)||(17662531-17662574)
chr4 (1-71)||(16934436-16934506)
chr4 (1-71)||(18847123-18847193)
chr4 (122-226)||(9174580-9174684)
chr4 (136-227)||(619895-619987)
chr4 (48-124)||(18847049-18847124)
chr4 (1-44)||(2485166-2485209)
chr4 (1-44)||(6764836-6764879)
chr4 (1-71)||(16932082-16932152)
chr4 (14-71)||(11008876-11008933)
chr4 (144-224)||(40091871-40091952)
chr4 (1-44)||(14633317-14633360)
chr4 (5-44)||(40637071-40637110)
chr4 (1-44)||(44600131-44600174)
chr4 (5-44)||(47868398-47868437)
chr4 (123-224)||(51015042-51015144)
chr4 (5-55)||(9176771-9176821)
chr4 (1-69)||(40999240-40999308)
chr4 (13-69)||(52043735-52043791)
chr4 (1-44)||(8631716-8631759)
chr4 (1-44)||(14787726-14787769)
chr4 (1-44)||(16186130-16186173)
chr4 (1-44)||(22132692-22132735)
chr4 (131-174)||(24878836-24878879)
chr4 (1-44)||(25357634-25357677)
chr4 (1-44)||(47211039-47211082)
chr4 (1-44)||(53405124-53405167)
chr4 (1-43)||(18537764-18537806)
chr4 (131-173)||(24880299-24880341)
chr4 (110-147)||(11009014-11009051)
chr4 (15-44)||(22134937-22134966)
chr4 (15-44)||(24348211-24348240)
chr4 (13-42)||(28453686-28453715)
chr4 (15-71)||(22780688-22780744)
chr4 (15-71)||(22783053-22783109)
[»] chr5 (70 HSPs)
chr5 (1-228)||(25921766-25921994)
chr5 (5-226)||(2174680-2174901)
chr5 (5-226)||(39797849-39798070)
chr5 (5-222)||(4236374-4236611)
chr5 (5-226)||(38881845-38882087)
chr5 (1-226)||(31466271-31466496)
chr5 (1-226)||(12556216-12556441)
chr5 (1-124)||(21684754-21684876)
chr5 (1-124)||(16776021-16776144)
chr5 (1-188)||(36402621-36402806)
chr5 (1-226)||(2818629-2818847)
chr5 (95-226)||(659713-659844)
chr5 (1-224)||(6756257-6756480)
chr5 (1-122)||(21947896-21948013)
chr5 (64-226)||(34479811-34479972)
chr5 (1-120)||(20507755-20507873)
chr5 (110-226)||(34477515-34477632)
chr5 (136-226)||(20504361-20504452)
chr5 (131-227)||(18186491-18186588)
chr5 (131-226)||(21947770-21947866)
chr5 (136-226)||(20507910-20508001)
chr5 (110-226)||(31544798-31544915)
chr5 (131-226)||(16775897-16775993)
chr5 (110-226)||(31542442-31542559)
chr5 (1-71)||(31542651-31542721)
chr5 (1-71)||(31544996-31545066)
chr5 (111-172)||(659869-659929)
chr5 (1-44)||(3373334-3373377)
chr5 (1-44)||(4410000-4410043)
chr5 (1-44)||(10529392-10529435)
chr5 (1-44)||(23665081-23665124)
chr5 (1-44)||(23793463-23793506)
chr5 (1-44)||(39854427-39854470)
chr5 (3-44)||(15354777-15354818)
chr5 (3-44)||(15357053-15357094)
chr5 (48-117)||(31544929-31544997)
chr5 (14-71)||(34477378-34477435)
chr5 (1-44)||(23667356-23667399)
chr5 (1-44)||(23742058-23742101)
chr5 (1-44)||(26097676-26097719)
chr5 (13-68)||(29748260-29748315)
chr5 (1-44)||(31179664-31179707)
chr5 (5-44)||(38960339-38960378)
chr5 (101-226)||(38960478-38960604)
chr5 (110-226)||(10749505-10749622)
chr5 (6-44)||(10757207-10757245)
chr5 (110-226)||(15354948-15355065)
chr5 (110-226)||(15357224-15357341)
chr5 (1-43)||(36208524-36208566)
chr5 (14-71)||(34479739-34479796)
chr5 (8-44)||(6745004-6745040)
chr5 (8-44)||(6747247-6747283)
chr5 (1-41)||(18509612-18509652)
chr5 (163-226)||(21684905-21684969)
chr5 (13-44)||(2144897-2144928)
chr5 (1-44)||(10586782-10586825)
chr5 (1-44)||(15552178-15552221)
chr5 (1-44)||(27910388-27910431)
chr5 (1-44)||(27912473-27912516)
chr5 (13-43)||(1189919-1189949)
chr5 (1-43)||(20044954-20044996)
chr5 (14-44)||(25803959-25803989)
chr5 (1-38)||(6661475-6661512)
chr5 (7-44)||(10749730-10749767)
chr5 (1-42)||(18466625-18466666)
chr5 (15-44)||(18468950-18468979)
chr5 (7-44)||(18596590-18596627)
chr5 (7-44)||(26098550-26098587)
chr5 (64-117)||(31542573-31542625)
chr5 (1-41)||(18511507-18511547)
[»] chr1 (62 HSPs)
chr1 (1-226)||(6822775-6823001)
chr1 (1-226)||(28840418-28840664)
chr1 (1-224)||(38925773-38925996)
chr1 (1-226)||(47451405-47451634)
chr1 (5-227)||(15823285-15823528)
chr1 (1-226)||(28842233-28842479)
chr1 (31-226)||(49687301-49687496)
chr1 (1-122)||(41646786-41646906)
chr1 (1-124)||(20302323-20302445)
chr1 (5-124)||(51749903-51750021)
chr1 (5-124)||(51752229-51752347)
chr1 (5-226)||(13761577-13761819)
chr1 (1-124)||(6823748-6823870)
chr1 (6-226)||(10400128-10400369)
chr1 (1-122)||(28207361-28207481)
chr1 (1-121)||(39462385-39462505)
chr1 (1-122)||(13214947-13215067)
chr1 (1-190)||(14098265-14098452)
chr1 (1-121)||(30790689-30790808)
chr1 (1-122)||(3579913-3580033)
chr1 (110-226)||(51749778-51749896)
chr1 (110-226)||(51752104-51752222)
chr1 (48-190)||(16231378-16231518)
chr1 (118-226)||(3580050-3580159)
chr1 (110-226)||(47177078-47177194)
chr1 (136-227)||(39462257-39462349)
chr1 (1-71)||(16231517-16231587)
chr1 (110-226)||(47179428-47179545)
chr1 (1-54)||(20291390-20291443)
chr1 (1-69)||(16226085-16226153)
chr1 (131-190)||(13214858-13214917)
chr1 (1-44)||(24325599-24325642)
chr1 (110-222)||(16225891-16226004)
chr1 (116-189)||(6823661-6823735)
chr1 (1-41)||(15295143-15295183)
chr1 (1-69)||(47177276-47177344)
chr1 (1-69)||(47179627-47179695)
chr1 (1-43)||(2617460-2617502)
chr1 (1-44)||(18800864-18800907)
chr1 (122-229)||(20291277-20291386)
chr1 (5-44)||(23783494-23783533)
chr1 (110-226)||(23783238-23783355)
chr1 (7-44)||(43104102-43104139)
chr1 (191-227)||(13461357-13461393)
chr1 (1-44)||(2510623-2510666)
chr1 (1-44)||(9459718-9459761)
chr1 (1-44)||(9463545-9463588)
chr1 (13-44)||(12302817-12302848)
chr1 (123-226)||(20302198-20302303)
chr1 (1-44)||(28998548-28998591)
chr1 (1-44)||(29004264-29004307)
chr1 (1-44)||(46432023-46432066)
chr1 (1-44)||(47906207-47906250)
chr1 (1-44)||(49495494-49495537)
chr1 (1-43)||(14183881-14183923)
chr1 (14-44)||(31735833-31735863)
chr1 (1-42)||(25251570-25251611)
chr1 (7-44)||(48665114-48665151)
chr1 (1-41)||(21948486-21948526)
chr1 (13-69)||(26613547-26613603)
chr1 (1-41)||(39932017-39932057)
chr1 (180-227)||(41646680-41646728)
[»] chr2 (39 HSPs)
chr2 (5-226)||(42064231-42064473)
chr2 (1-221)||(6264438-6264658)
chr2 (6-226)||(43623866-43624085)
chr2 (1-226)||(40032351-40032586)
chr2 (14-226)||(18800608-18800819)
chr2 (5-121)||(13910341-13910456)
chr2 (1-124)||(27104639-27104761)
chr2 (1-226)||(21520988-21521234)
chr2 (5-124)||(19504642-19504760)
chr2 (1-124)||(24162505-24162627)
chr2 (1-223)||(6259108-6259351)
chr2 (5-124)||(19502308-19502426)
chr2 (1-122)||(22407702-22407822)
chr2 (1-122)||(22287629-22287749)
chr2 (110-226)||(24162634-24162752)
chr2 (110-222)||(27104519-27104632)
chr2 (110-226)||(19502433-19502550)
chr2 (136-226)||(22407857-22407948)
chr2 (13-95)||(28462591-28462671)
chr2 (1-72)||(35107191-35107262)
chr2 (5-55)||(45332389-45332439)
chr2 (110-189)||(19504767-19504846)
chr2 (1-44)||(5377726-5377769)
chr2 (5-44)||(36559072-36559111)
chr2 (5-44)||(36561349-36561388)
chr2 (1-44)||(45280278-45280321)
chr2 (110-226)||(36559241-36559358)
chr2 (17-97)||(33603791-33603870)
chr2 (13-69)||(35028473-35028529)
chr2 (13-44)||(17897547-17897578)
chr2 (1-44)||(23452534-23452577)
chr2 (1-44)||(35215889-35215932)
chr2 (1-44)||(40699229-40699272)
chr2 (5-44)||(42452702-42452741)
chr2 (13-43)||(20589581-20589611)
chr2 (1-43)||(22163240-22163282)
chr2 (110-226)||(45332558-45332675)
chr2 (1-42)||(20147041-20147082)
chr2 (15-68)||(45156946-45156999)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-226)||(2629-2875)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-222)||(73320-73540)
scaffold0025 (1-124)||(69588-69709)
scaffold0025 (120-222)||(69726-69829)
[»] chr6 (40 HSPs)
chr6 (5-226)||(32279794-32280014)
chr6 (1-228)||(1072170-1072397)
chr6 (1-226)||(19227701-19227948)
chr6 (6-230)||(8995251-8995495)
chr6 (6-230)||(9019698-9019942)
chr6 (5-124)||(11983326-11983444)
chr6 (1-124)||(14507468-14507590)
chr6 (6-227)||(15530420-15530662)
chr6 (1-122)||(15541433-15541553)
chr6 (1-122)||(30729121-30729241)
chr6 (1-122)||(15532974-15533094)
chr6 (110-170)||(4816689-4816749)
chr6 (144-226)||(14507634-14507716)
chr6 (1-71)||(26068592-26068662)
chr6 (110-226)||(33308685-33308802)
chr6 (110-226)||(33310954-33311071)
chr6 (48-121)||(24192635-24192707)
chr6 (1-69)||(26066321-26066389)
chr6 (1-44)||(12195808-12195851)
chr6 (1-71)||(4816538-4816608)
chr6 (48-114)||(24191538-24191603)
chr6 (110-226)||(26066494-26066611)
chr6 (110-226)||(26068765-26068882)
chr6 (1-38)||(19704868-19704905)
chr6 (14-71)||(20915664-20915721)
chr6 (64-124)||(4816624-4816682)
chr6 (1-44)||(1230542-1230585)
chr6 (1-36)||(14459058-14459093)
chr6 (5-44)||(28241618-28241657)
chr6 (1-44)||(29754989-29755032)
chr6 (110-226)||(29755162-29755279)
chr6 (13-69)||(12937501-12937559)
chr6 (1-44)||(18318004-18318047)
chr6 (1-44)||(26932863-26932906)
chr6 (27-69)||(12911770-12911812)
chr6 (14-44)||(30034913-30034943)
chr6 (10-44)||(33308932-33308966)
chr6 (10-44)||(33311201-33311235)
chr6 (15-44)||(2629197-2629226)
chr6 (15-44)||(3028157-3028186)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-122)||(14894-15014)
scaffold0131 (126-225)||(14768-14869)
[»] scaffold0068 (2 HSPs)
scaffold0068 (1-124)||(29034-29156)
scaffold0068 (163-226)||(28941-29005)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-122)||(3872-3992)
[»] scaffold0127 (1 HSPs)
scaffold0127 (110-226)||(12937-13054)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-44)||(1124-1167)
[»] scaffold0472 (2 HSPs)
scaffold0472 (1-44)||(6151-6194)
scaffold0472 (110-226)||(5927-6044)
[»] scaffold0140 (4 HSPs)
scaffold0140 (5-44)||(22162-22201)
scaffold0140 (5-44)||(24437-24476)
scaffold0140 (110-226)||(21915-22032)
scaffold0140 (110-226)||(24190-24307)
[»] scaffold0038 (1 HSPs)
scaffold0038 (5-44)||(41780-41819)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-44)||(183932-183975)
scaffold0005 (1-44)||(51961-52004)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-44)||(1988-2031)
[»] scaffold0154 (1 HSPs)
scaffold0154 (7-44)||(11772-11809)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-37)||(4773-4809)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 25542527 - 25542232
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25542527 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctacactcaaaaaatatgtttctgtttttcgct 25542428  T
Q  101 gccagcgcaccatcgtgccacgat---------------------ttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    ||||||||||||||||||||||||                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25542427 gccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 25542328  T
Q  180 aatcgtgccacattcctgcagatcttgattttaagttaactctcacataaagaaatgaaataattgtacgtaatcatatctcagcgtcgcgttagt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  25542327 aatcgtgccacattcctgcagatcttgattttaagttaactctcacatgaagaaatgaaataattgtacgtaatcatatcttagcgtcgcgttagt 25542232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 1049588 - 1049814
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||| |||||     
T  1049588 ctcaaagtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-tacgtttctgttattcgcc 1049686  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    ||||||||||| ||||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1049687 gccagcgcaccttcgtgccacgatttttccagtaccttgcttcaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattcctgca 1049786  T
Q  200 gatcttgattttaagttaactctcacat 227  Q
    ||||||||||||||||||||||||||||    
T  1049787 gatcttgattttaagttaactctcacat 1049814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 40837042 - 40837261
Alignment:
Q  8 tttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcg 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||     
T  40837042 tttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaaatatgtttctatttttcgctgccagca 40837141  T
Q  108 caccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atctt 205  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||||||| ||  | ||||||||||  | |||||| | | |    
T  40837142 caccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgtccgaccatcgtgccacgattctgcagaaacct 40837240  T
Q  206 gattttaagttaactctcaca 226  Q
    |||||||||||||||||||||    
T  40837241 gattttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 26804551 - 26804345
Alignment:
Q  19 acaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgc 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||  || ||||||||| || |||||||||||||||||||||    
T  26804551 acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa--tacgtttctgttatttgctgccagcgcaccatcgtgc 26804454  T
Q  119 cacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagtta 217  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  | ||| || | | |||||||||||||    
T  26804453 cacgatttttccactgccttgcctcaaaactgaaacctccaatcgtaccacgttgcccagccatcgtgccacgattctgtagaaacctgattttaagtta 26804354  T
Q  218 actctcaca 226  Q
    |||||||||    
T  26804353 actctcaca 26804345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 35625 - 35379
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| || ||||||| | || |||    
T  35625 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa-tacgtttctgctatttgct 35527  T
Q  101 gccagcgcac---------------------catcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    ||||||||||                     ||||||||||||||||||| ||||| |||||| |||  ||||||||||||||||||||||||||| |||    
T  35526 gccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagc 35427  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35426 aatcgtgccacgattcctgcagatcttgattttaagttaactctcaca 35379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44560 - 44314
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| | |||||||||||| |||| || |||    
T  44560 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatctgcac-ccaaaaatatgtttatgttatttgct 44462  T
Q  101 gccagcgcaccatcgtgccac---------------------gatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||||||||||||||||                     |||||||| ||||| |||| | |||  ||||||||||||||||||||| ||||||||     
T  44461 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttgcgtcaaacttgaaacctccaatcgtgccacattgcccaga 44362  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44361 aatcgtgccacgattcctgcagatcttgattttaagttaactctcaca 44314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 27306522 - 27306770
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||||    
T  27306522 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgct 27306620  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    || ||||||                     |||||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||||| |||||    
T  27306621 gctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttgcctcaaaactgaaacctccaatcgtgccacgttgtccagc 27306720  T
Q  180 aatcgtgccacattcctgcagatcttgattttaagttaactctcacataa 229  Q
     ||||||||||  |  |||| | | | |||||||||||||||||||||||    
T  27306721 catcgtgccacgattttgcaaaaccttattttaagttaactctcacataa 27306770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 3878571 - 3878322
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatt----tatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgttttt 96  Q
    ||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||||||| |||||||||| |  |||||| ||||||||| ||    
T  3878571 ctcaaagtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc--aaaatacgtttctgttatt 3878474  T
Q  97 cgctgccagcg---------------------caccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcc 175  Q
    |||||||||||                     | |||||||||||||||||||| ||||| |||||| |||  |||||||||||||||||||||||||||    
T  3878473 cgctgccagcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcc 3878374  T
Q  176 cagcaatcgtgccacattcctgcagatct-tgattttaagttaactctcaca 226  Q
    |||| ||||||||||  | |||||||  | ||||||||||||||||||||||    
T  3878373 cagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18567609 - 18567491
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||  ||| |||||  |||||||| ||||||||| |||| |    
T  18567609 ctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaa-caatttgcaccaaaaaaatacgtttctgttattcgtt 18567511  T
Q  101 gccagcgcaccatcgtgcca 120  Q
    ||||||||||||||||||||    
T  18567510 gccagcgcaccatcgtgcca 18567491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31435340 - 31435458
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||  ||| |||||  |||||||| ||||||||| |||| |    
T  31435340 ctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaa-caatttgcaccaaaaaaatacgtttctgttattcgtt 31435438  T
Q  101 gccagcgcaccatcgtgcca 120  Q
    ||||||||||||||||||||    
T  31435439 gccagcgcaccatcgtgcca 31435458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22392469 - 22392349
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||  |||||||  ||||||||||| ||     
T  22392469 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcact-gaaaaatacatttctgttttttgcc 22392371  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
     ||||||||||||||| |||||    
T  22392370 tccagcgcaccatcgtaccacg 22392349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 18567459 - 18567363
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||| ||| | ||||||||||| ||||||||||    
T  18567459 agtgacttgcctcaaaactgaaacctccaatcgtgccactttgcccagctatcgtgccacgatttctgtagaacctgattttaagtcaactctcaca 18567363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 31435490 - 31435586
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||| ||| | ||||||||||| ||||||||||    
T  31435490 agtgacttgcctcaaaactgaaacctccaatcgtgccactttgcccagctatcgtgccacgatttctgtagaacctgattttaagtcaactctcaca 31435586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 1047386 - 1047503
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||||||  |||||||||  | |||||| | | |||    
T  1047386 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 1047484  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  1047485 ttttaagttaactctcaca 1047503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 45366526 - 45366446
Alignment:
Q  17 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcg 98  Q
    ||||||||| ||||||||||||||||||  | |||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  45366526 atacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcact-gaaaaatacgtttctgtttttcg 45366446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22251835 - 22251893
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttg 59  Q
    |||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  22251835 ctcaaagtttactctgattcaaggtttatatttatagtaaaagtgtcgcttaaaatttg 22251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7092472 - 7092512
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7092472 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1606466 - 1606423
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  1606466 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 1606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22108157 - 22108114
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  22108157 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 22108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22137168 - 22137125
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  22137168 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 22137125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40549917 - 40549874
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40549917 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 40549874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40552195 - 40552152
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40552195 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 40552152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7094719 - 7094759
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  7094719 ctcaaagtttgctctgatacaaggtctatatttataataaa 7094759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1849961 - 1849918
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  1849961 ctcaaagtttgctatgaaacaaggtctatatttatagtaaaagt 1849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2935349 - 2935306
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  2935349 ctcagagtttgctttgatacaaggtctatatttatagtaaaagt 2935306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 9027401 - 9027440
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  9027401 aagtttgctttgatacaaggtctatatttatagtaaaagt 9027440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 2935187 - 2935070
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  2935187 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 2935089  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  2935088 ttttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 9027570 - 9027687
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  9027570 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 9027668  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  9027669 ttttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 22136995 - 22136878
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  22136995 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 22136897  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  22136896 ttttaagttaactctcaca 22136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 40552022 - 40551905
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  40552022 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 40551924  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  40551923 ttttaagttaactctcaca 40551905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7470319 - 7470359
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  7470319 ctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7472277 - 7472317
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  7472277 ctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3035713 - 3035670
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  3035713 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 3035670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7188539 - 7188496
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  7188539 ctcaaggtttactctgatacaaagtctatatttatagtaaaagt 7188496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7349572 - 7349615
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  7349572 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 7349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11757220 - 11757177
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  11757220 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 11757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20299450 - 20299407
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  20299450 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 20299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28485558 - 28485515
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  28485558 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 28485515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31156204 - 31156247
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||    
T  31156204 ctcaaagtttgccttgatacaagctctatatttatagtaaaagt 31156247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38393978 - 38393935
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  38393978 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 38393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42331292 - 42331335
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||  |||||||||| |||||||||||||||||||||    
T  42331292 ctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 42331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43253817 - 43253860
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  43253817 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 43253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 9680798 - 9680768
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||||||||||||||||||||||||    
T  9680798 tctgatacaaggtctatatttatagtaaaag 9680768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 18345520 - 18345490
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  18345520 ctgatacaaggtctatatttatagtaaaagt 18345490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 24526366 - 24526444
Alignment:
Q  112 atcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    |||||||||||||||||| |||| |   ||  ||| ||||| | ||||||||||||||||||||| |||| ||||||||    
T  24526366 atcgtgccacgatttttccagtgacaaacccaaaacctgaaccatccaatcgtgccacgttgccctgcaaacgtgccac 24526444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25276137 - 25276095
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||||||||||||||| |  |||||||||||||||||    
T  25276137 ctcaaagtttgctctgatacaaagcatatatttatagtaaaag 25276095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 38396269 - 38396239
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  38396269 ctgatacaaggtctatatttatagtaaaagt 38396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 1047239 - 1047295
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||| ||||||||||||||||||   ||||||||| || || ||||||||    
T  1047239 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 1047295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 4424060 - 4423833
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  4424060 ctcaaagtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-tatgtttctatttttcgct 4423962  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  4423961 gccagcgcaccatcgtgccacgatttttccagtgccttgccttaaaactgaaacctccaattgtgccacgttgcccagcaattgtgccacgattcctgca 4423862  T
Q  200 gatcttgattttaagttaactctcacata 228  Q
    |||||||||||||||||||||||||||||    
T  4423861 gatcttgattttaagttaactctcacata 4423833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 12517319 - 12517567
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  12517319 ctcaaagtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaatttgcactc-aaaaatatgtttctgtttttcgct 12517417  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||| ||                     |||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||  ||    
T  12517418 gccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattgcctcaaaactgaaacctccaatcgtgccacgttgccttgc 12517517  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcacata 228  Q
     |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12517518 catcgtgccacgattcctgcagatcctgattttaagttaactctcacata 12517567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 3886211 - 3886392
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactc--aaaaaatatgtttctgtttttcg 98  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||| |  |||||||||||||||||| ||||    
T  3886211 ctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaaaaatatgtttctgttattcg 3886310  T
Q  99 ctgccagcgcaccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||| ||||||||| |||||||||||| |||| |||||||   ||||||||||||||| |||||||||||||| |||||    
T  3886311 ctgccagcacaccatcgtaccacgatttttccagtgtcttgcctcaaaaaactgaaacctcc-atcgtgccacgttgtccagc 3886392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 27827024 - 27826782
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  27827024 aagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca-aaaatatgtttttgtttttcgctgcca 27826926  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgcctta-aaactgaaacctccaatcgtgccacgttgcccagcaat 182  Q
    |||||                     |||||||||||||||||||| ||||| |||| | | ||| |||||||||| |||||||||||||||||||||||    
T  27826925 gcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcttcaaaaaatgaaacctcc-atcgtgccacgttgcccagcaat 27826827  T
Q  183 cgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  27826826 cgtgccacgattcctgcagatcctgattttaagttaactctcaca 27826782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 27829335 - 27829093
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  27829335 aagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca-aaaatatgtttttgtttttcgctgcca 27829237  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgcctta-aaactgaaacctccaatcgtgccacgttgcccagcaat 182  Q
    |||||                     |||||||||||||||||||| ||||  |||||| | ||| |||||||||| |||||||||||||||||||||||    
T  27829236 gcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcctcaaaaaatgaaacctcc-atcgtgccacgttgcccagcaat 27829138  T
Q  183 cgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  27829137 cgtgccacgattcctgcagatcctgattttaagttaactctcaca 27829093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14807793 - 14807672
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||| |||| |||||||||||    
T  14807793 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc--aaaatacgtttatgtttttcgct 14807696  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    |||||||||||| |||||||||||    
T  14807695 gccagcgcaccaccgtgccacgat 14807672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15072752 - 15072506
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| | ||||||| ||||||||| ||||||    
T  15072752 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcac-ccaaaaatacgtttctgttattcgct 15072654  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||||                     |||||||| ||||||||||| |||| ||||| | |||||||||||||||||||||| |||||||||||||    
T  15072653 gccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttgcttcaaaactgaaacctccaatcgtgtcacgttgcccagc 15072554  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
     |||||| ||| |||||||||||   ||||||||||||||||||||||    
T  15072553 catcgtgtcacgattcctgcagaatctgattttaagttaactctcaca 15072506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 28251860 - 28251981
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||    
T  28251860 ctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc--aaaatacgtttctgtttttcgct 28251957  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    |||| ||||||||||| |||||||    
T  28251958 gccaacgcaccatcgtaccacgat 28251981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2468391 - 2468511
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||     
T  2468391 ctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgcact-aaaaaatacgtttctgttattcgca 2468489  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
     |||||||||||||||||||||    
T  2468490 tccagcgcaccatcgtgccacg 2468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 15068009 - 15067777
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatc 114  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||| |||| ||||||||||||||||||||    
T  15068009 tgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttttgttattcgctgccagcgcaccatc 15067911  T
Q  115 gtgccac---------------------gatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-at 192  Q
    |||||||                     |||||||| |||| ||||| | ||||||||||||||||||||||||| |||||||||| ||| |||||| ||    
T  15067910 gtgccacgttgcgatcccatcgtggcatgatttttccagtggcttgcttcaaaactgaaacctccaatcgtgccatgttgcccagccatcttgccacgat 15067811  T
Q  193 tcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| |   ||||||||||||||| ||||||    
T  15067810 tcctgcaaaatctgattttaagttaacactcaca 15067777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 28252009 - 28252122
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgat 208  Q
    |||||||||||||||||||| ||||| |||||| |||  |||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||| ||||    
T  28252009 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtaccacgttgcctagccatcgtgccacgattcctgcagatcctgat 28252108  T
Q  209 tttaagttaactct 222  Q
    ||||||||||||||    
T  28252109 tttaagttaactct 28252122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 44720735 - 44720617
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag--atcttga 207  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||  |||||||||||| ||||||  | ||||||  | | |||    
T  44720735 ccatcgtgccacgatttttccagtaccttgcctcaaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacgattctgcagaaaacctga 44720636  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  44720635 ttttaagttaactctcaca 44720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 18810746 - 18810680
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||    
T  18810746 aagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgc 18810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 18812785 - 18812668
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| ||||||||||||||||||||  |||||||||  | || ||| | | |||    
T  18812785 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctga 18812687  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  18812686 ttttaagttaactctcaca 18812668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 18812931 - 18812865
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||    
T  18812931 aagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgc 18812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 14807665 - 14807552
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgat 208  Q
    |||||||||||||||||||| ||||| |||||| |||  ||||||||||||||||| ||||||||||| | ||| ||||||  | |||||| | | ||||    
T  14807665 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgtcacgttgcccaaccatcatgccacgattctgcagaaacctgat 14807566  T
Q  209 tttaagttaactct 222  Q
    ||||||||||||||    
T  14807565 tttaagttaactct 14807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 44720816 - 44720742
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 124  Q
    ||||||||| || || |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  44720816 gcttaaaatctgtaacaaatctgcacccaaaaa-tatgtttctgttttt-gctgccagcgcaccatcgtgccacgat 44720742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43530166 - 43530123
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43530166 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 43530123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 18810600 - 18810483
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaac-tgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||| | ||||||| |||||||||||| ||||  | ||||||||| |||||||||||||||||||  |||||||||  | |||||| | | |||    
T  18810600 ccatcgtgccgcaatttttccagtgccttgcctaaaaaaataaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 18810502  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  18810501 ttttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44720885 - 44720815
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  44720885 ctcaaagtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 44720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 17847558 - 17847501
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctg 70  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||| |||||||    
T  17847558 tctgatacaaggtctatatttatagtaaaagtatccctcaaaatttggaacaaatctg 17847501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22684959 - 22685002
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  22684959 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 22685002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 43079464 - 43079347
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    ||||||| |||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||  ||  |||||||||  | |||||| | | |||    
T  43079464 ccatcgtaccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgccttgccgtcgtgccacgattctgcagaaacctga 43079366  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  43079365 ttttaagttaactctcaca 43079347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 43081839 - 43081722
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||| |||||  ||  |||||||||  | |||||| | | |||    
T  43081839 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccactttgccttgccgtcgtgccacgattctgcagaaacctga 43081741  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  43081740 ttttaagttaactctcaca 43081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6376031 - 6375988
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  6376031 ctcaatgtttactctgatacaaggtctatatttatagtaaaagt 6375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 181579 - 181536
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||  |||||||||| |||||||||||||||||||||    
T  181579 ctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 181536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13858777 - 13858820
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  13858777 ctcaaggtttactctgatacaaagtctatatttatagtaaaagt 13858820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15809257 - 15809214
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  15809257 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 15809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24873480 - 24873523
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  24873480 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 24873523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26775243 - 26775200
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||||||||||||||| | |||||||||||||||||||    
T  26775243 ctcaaggtttgctctgatacaaagcctatatttatagtaaaagt 26775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28283518 - 28283561
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  28283518 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 28283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31162255 - 31162212
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| || ||||||||||||||||||||||||||||||    
T  31162255 ctcaaggtttactatgatacaaggtctatatttatagtaaaagt 31162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32339347 - 32339304
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  32339347 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 32339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41382715 - 41382672
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||    
T  41382715 ctcaaggtttactctgattcaaggtctatatttatagtaaaagt 41382672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14477318 - 14477276
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  14477318 ctcaaggtttgctctgatacaaagcctatatttatagtaaaag 14477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21482364 - 21482322
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||| |||||||||||  |||||||||||||||||||    
T  21482364 ctcaaagtttactctgatacaaattctatatttatagtaaaag 21482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31035110 - 31035068
Alignment:
Q  1 ctcaaagtttgc-tctgatacaaggtctatatttatagtaaaa 42  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  31035110 ctcaaagtttacatctgatacaaggtctatatttatagtaaaa 31035068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 43081987 - 43081957
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  43081987 ctgatacaaggtctatatttatagtaaaagt 43081957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 43079614 - 43079585
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  43079614 tgatacaaggtctatatttatagtaaaagt 43079585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11163116 - 11162891
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| |||||     
T  11163116 ctcaaagtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgcc 11163018  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgc 198  Q
    ||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  11163017 gccagcgcaccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgcccagcaatcgtgccacgattcctgc 11162919  T
Q  199 agatcttgattttaagttaactctcaca 226  Q
    ||||||||||||||||||||||||||||    
T  11162918 agatcttgattttaagttaactctcaca 11162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11170370 - 11170145
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||     
T  11170370 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatatgtttctgttattcgcc 11170272  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgc 198  Q
    |||||||||| |||| ||||||||||||| ||||||||||||  ||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  11170271 gccagcgcacaatcgagccacgatttttccagtgccttgcctcaaaaaccgaaacctcc-atcgtgccacgttgcccagcaaccgtgccacgattcctgc 11170173  T
Q  199 agatcttgattttaagttaactctcaca 226  Q
    ||||||||||||||||||||||||||||    
T  11170172 agatcttgattttaagttaactctcaca 11170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 5522910 - 5523152
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  5522910 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcactc-aaaaatatgtttctgtttttcgctgcca 5523008  T
Q  105 gcgcaccatc---------------------gtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    ||||||||||                     ||||||||||||||| ||| |||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  5523009 gcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttgcctcaaaactgaaaccaccaatcgtgccatgttgcccagcaatc 5523108  T
Q  184 gtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
     |||||| |||||| |||||||||||||||||||||||||||||    
T  5523109 ttgccacgattcctccagatcttgattttaagttaactctcaca 5523152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 1321407 - 1321161
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  1321407 ctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgct 1321309  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||| ||                     |||||||||||||||||||  ||||| |||||| |||  ||||||||| |||||||||||||||||||||    
T  1321308 gccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcctcaaacttgaaacctctaatcgtgccacgttgcccagc 1321209  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1321208 aatcgtgccacgattcctgcagatcttgattttaagttaactctcaca 1321161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 48361961 - 48362186
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||| ||||||| | ||||||    
T  48361961 ctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-tccaaaaatacgtttctgctattcgct 48362059  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    |||||||||||||| ||||||||    || |||  ||||||| ||||||||||| |||||||||||||||||||||| | |||||||||| ||| || ||    
T  48362060 gccagcgcaccatcatgccacgaaaaatctagttacttgcctcaaaactgaaacttccaatcgtgccacgttgcccaaccatcgtgccacgatttctaca 48362159  T
Q  200 gatcttgattttaagttaactctcaca 226  Q
    || | ||||||||||||||||||||||    
T  48362160 gaacctgattttaagttaactctcaca 48362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 26720510 - 26720268
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  26720510 aagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcact-aaaaaatatgtttctgtttttcgctgcca 26720412  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    || ||                     |||||||||||||||||||| ||||| |||||| |||  |||||||||||||| ||||||||||| |||| |||    
T  26720411 gcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcctgccacgttgctcagccatc 26720312  T
Q  184 gtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  26720311 gtgccacgattcctgcagatcctgattttaagttaactctcaca 26720268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 5191615 - 5191374
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  5191615 aagtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgctgcca 5191517  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    |||||                     |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5191516 gcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttgcctcaaaactgaaacctccaatcgtgccacgatgcccagcaatc 5191417  T
Q  184 gtgccacattcctgcagatct-tgattttaagttaactctcac 225  Q
    |||||||  | |||||||  | |||||||||||||||||||||    
T  5191416 gtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 35777387 - 35777163
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||| || || |||||||||| | |||||||||||| ||||||| |||    
T  35777387 ctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcac-ccaaaaatatgtttatgttttt-gct 35777290  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgca 199  Q
    ||||||||||||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||||||  |||||||||  | |||||    
T  35777289 gccagcgcaccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctgtcgtgccacgattctgca 35777191  T
Q  200 gatct-tgattttaagttaactctcaca 226  Q
    ||  | | ||||||||||||||||||||    
T  35777190 gaaatctaattttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 18097196 - 18097422
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||||||||| || |||||||||| |||||| || ||||||||| ||||| ||||    
T  18097196 aagtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgcacccaaaaa-tacgtttctgttattcgccgcca 18097294  T
Q  105 ----gcg-caccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgca 199  Q
        ||| | ||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  |  ||||    
T  18097295 ctatgcgaccccatcgtgccacgatttttcctatgccttgcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgca 18097394  T
Q  200 g-atcttgattttaagttaactctcaca 226  Q
    | | | ||||||||||||||||||||||    
T  18097395 gaaacctgattttaagttaactctcaca 18097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10084684 - 10084806
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  10084684 ctcaaagtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgct 10084782  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  10084783 gccagcgcaccatcgtgccacgat 10084806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10191604 - 10191726
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  10191604 ctcaaagtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactc-aaaaatatgtttctgtttttcgct 10191702  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  10191703 gccagcgcaccatcgtgccacgat 10191726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 32219061 - 32218836
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  || ||||||||||||||||||||| | ||||| |  |||||||||||||| |||||||||| | ||||||| |||||| || ||||||    
T  32219061 ctcaaagtttagtcagatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatctgcac-ccaaaaatacgtttctcttattcgct 32218963  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    ||||||||||||||||||||||     || || | ||||||| |||  |||||||||||||||||||||||||||||   |||||||||| ||| |||||    
T  32218962 gccagcgcaccatcgtgccacggaaaatccagcgacttgcctcaaagttgaaacctccaatcgtgccacgttgcccaatcatcgtgccacgatttctgca 32218863  T
Q  200 gatcttgattttaagttaactctcaca 226  Q
    || | ||||||||||||||||||||||    
T  32218862 gaacctgattttaagttaactctcaca 32218836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 22114600 - 22114718
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||| ||||    
T  22114600 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgccgcca 22114698  T
Q  105 gcgcaccatcgtgccacgat 124  Q
     |||||||||||||||||||    
T  22114699 tcgcaccatcgtgccacgat 22114718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 18162616 - 18162492
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatc 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||||||||||||||||||    
T  18162616 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgctgccagcgcaccatc 18162518  T
Q  115 gtgccacgatttttcaagtgccttgc 140  Q
    ||| ||||||||||| |||| |||||    
T  18162517 gtggcacgatttttccagtgacttgc 18162492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 32264345 - 32264454
Alignment:
Q  12 ctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcacc 111  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||| | ||||||||||||||||| |||||||||||||||||    
T  32264345 ctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcac-ccaaaaatatgtttctgttattcgctgccagcgcacc 32264443  T
Q  112 atcgtgccacg 122  Q
    |||||||||||    
T  32264444 atcgtgccacg 32264454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 3859490 - 3859372
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||| |||| | || ||||| ||||    
T  3859490 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcac-ccaaaaatacgtttatattattcgccgcca 3859392  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  3859391 gcgcaccatcgtgccacgat 3859372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 18099466 - 18099707
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||| || ||||| ||||    
T  18099466 aagtttactctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctattgttcgccgcca 18099563  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    |||||                     |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |||    
T  18099564 gcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttgcctcaaaactgaaacctccaatcgtgccacgttgcccagccatc 18099663  T
Q  184 gtgccacattcctgcag-atcttgattttaagttaactctcaca 226  Q
    |||||||  |  ||||| | | ||||||||||||||||||||||    
T  18099664 gtgccacgattttgcagaaacctgattttaagttaactctcaca 18099707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 226
Target Start/End: Original strand, 10956324 - 10956563
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagc 106  Q
    |||| |||||||||||||||||||||||||||||||   | ||||||||||||||| |||||||||| | ||||||| |||| |||| ||||||||||||    
T  10956324 gtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcac-ctaaaaatacgtttatgttattcgctgccagc 10956422  T
Q  107 gca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgt 185  Q
    |||                     |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| | || ||||| || ||    
T  10956423 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccccaaaactgaaacctccaatcgtgccatgatgtccagccat-gt 10956521  T
Q  186 gccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  10956522 gccacgattcctgcagatcctgattttaagttaactctcaca 10956563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 6719487 - 6719614
Alignment:
Q  64 aaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaac--ctccaat 161  Q
    |||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  |||||||    
T  6719487 aaatctgcacccaaaa-atatgtttctgttattcgccgccagcgcaccatcgtgccacgatttttccagtgcattgcctaaaaactgaaacctctccaat 6719585  T
Q  162 cgtgccacgttgcccagcaatcgtgccac 190  Q
    ||||||||| |||||  ||||||||||||    
T  6719586 cgtgccacgatgcccttcaatcgtgccac 6719614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 38889936 - 38889755
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatttttcaagtgccttgcct-taaa 146  Q
    ||||||||| || || |||||||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||  |||    
T  38889936 gcttaaaatctgtaacaaatctgcacccaaaaa-tatgtttctgttattcgccgccagcgcaccatcgtgccacgatttttccaatgccttgcctaaaaa 38889838  T
Q  147 actgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag--atcttgattttaagttaactctcacata 228  Q
    |||||||||||| ||||||||||||||||  || ||||| ||||  | ||||||  | | | ||||||||||||||||||||||    
T  38889837 actgaaacctcc-atcgtgccacgttgccttgccatcgtaccacgattctgcagaaaacctaattttaagttaactctcacata 38889755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24979673 - 24979511
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| |||||||||||||| |||||||||||| ||||| |  |||||||||||||| |||||||||| |||||||||||||| |||| ||||||    
T  24979673 ctcaaagtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatctgcac-caaaaaatatgtttatgttattcgct 24979575  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgt 164  Q
     |||||| |||||||||||||||    |  |||| ||||||  ||| |||||||||||||||||    
T  24979574 accagcgtaccatcgtgccacgaaaaattcagtgacttgccacaaagctgaaacctccaatcgt 24979511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 10958620 - 10958736
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagc 106  Q
    |||| |||||||||||||||||||||||||||||||   | ||||||||||||||| |||||||||| | ||||||| ||||||||| || |||||||||    
T  10958620 gtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcac-ctaaaaatacgtttctgttattggctgccagc 10958718  T
Q  107 gcaccatcgtgccacgat 124  Q
    ||||||||||||||||||    
T  10958719 gcaccatcgtgccacgat 10958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 45882905 - 45882785
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||| ||||| || |||||||||||||||||||||||||||||| |||||||||||||  || |||||||||| | ||||||| ||||||||| |||| |    
T  45882905 ctcatagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgcac-ccaaaaataggtttctgttattcgtt 45882807  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    | ||||||||||||||||||||    
T  45882806 gtcagcgcaccatcgtgccacg 45882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6066088 - 6066254
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| || || |||||||| | | |||||||  ||| | |||||  |     
T  6066088 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgctc-ccaaaaatacattt-tatttttatcc 6066185  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccac 169  Q
    |||||||||||||||||||||||| |||| ||||||||| ||  |||||| |||||||| ||||||||||    
T  6066186 gccagcgcaccatcgtgccacgatgtttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccac 6066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 15780822 - 15780745
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaat 82  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  15780822 aagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaaat 15780745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 24177245 - 24177126
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||| |||| || |||||||||||||||||||||| ||||||| || |||||||||||||| |||||||||||  ||||||| |||| ||||||||||     
T  24177245 ctcaatgtttactatgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgcact-taaaaatacgtttatgtttttcgcc 24177147  T
Q  101 gccagcgcaccatcgtgccac 121  Q
     ||| ||||||||||||||||    
T  24177146 tccaacgcaccatcgtgccac 24177126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 50493793 - 50493674
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||||||||||| ||||||||||  | |||||| | | |||    
T  50493793 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtgccacgattctgcagaaacctga 50493695  T
Q  208 ttttaagttaactctcacata 228  Q
    |||||||||||||||||||||    
T  50493694 ttttaagttaactctcacata 50493674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12268257 - 12268336
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaa 80  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||    
T  12268257 ctcaaagtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactgaaaaa 12268336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 53896637 - 53896759
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaa-ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||| |||||||  |||| || ||||||||| ||||||||||||||||||||||||||||||  | |||||| | | |||    
T  53896637 ccatcgtgccacgatttttccagtaccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagcaatcgtgccacgattctgcagaaacctga 53896735  T
Q  208 ttttaagttaactctcacataaag 231  Q
    ||||||||||||||||||| ||||    
T  53896736 ttttaagttaactctcacacaaag 53896759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 10192413 - 10192492
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||  || ||||||||||    
T  10192413 ccatcgtgccacgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgccacgttgccttgcgatcgtgccac 10192492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38890002 - 38889935
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38890002 ctcaaagtttgct---atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 38889935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6719402 - 6719472
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  6719402 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 38210184 - 38210067
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||||||  |||||||||  | |||||| | | |||    
T  38210184 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 38210086  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  38210085 ttttaagttaactctcaca 38210067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 10085493 - 10085557
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcc 175  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  10085493 ccatcgtgccacgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgccacgttgcc 10085557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 24177102 - 24176999
Alignment:
Q  124 tttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactct 222  Q
    |||||| |||| ||||| | | |||||||||  |||||||||||||||||||| |||| |||||||| ||| || |||| ||||||||||||||||||||    
T  24177102 tttttccagtgacttgcttcagaactgaaacaaccaatcgtgccacgttgccctgcaaacgtgccacgatttctccagaacttgattttaagttaactct 24177003  T
Q  223 caca 226  Q
    ||||    
T  24177002 caca 24176999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6063739 - 6063809
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  6063739 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6063809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 32264484 - 32264581
Alignment:
Q  131 agtgccttgccttaaaa-ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcacat 227  Q
    |||| ||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||| ||| ||||| | | |||||||||||||||||||||||    
T  32264484 agtgacttgcctcaaaaactgaaacctccaatcgtgccacgtt-cccagccatcgtgccacgatttctgcaaaacctgattttaagttaactctcacat 32264581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 46966938 - 46967023
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgc 99  Q
    |||||||||| || ||||||||||||||||||  | |||||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  46966938 tctgatacaatgtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgca-ttgaaaaatatgtttctgtttttcgc 46967023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 5886242 - 5886181
Alignment:
Q  10 tgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||    
T  5886242 tgctctgataaaaggtctatatttatagtaaaagtttcgcttaaaatctgtaacaaatctgc 5886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 5899717 - 5899656
Alignment:
Q  10 tgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| || || ||||||||    
T  5899717 tgctctgataaaaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 5899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 13893345 - 13893267
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttt 95  Q
    |||||||| |||||||||||||||||||||  | |||||||||||||| |||||||||||   |||||| |||||||||||    
T  13893345 tgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgcact--gaaaatacgtttctgtttt 13893267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 22114738 - 22114842
Alignment:
Q  123 atttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaact 220  Q
    ||||||| ||||||||||||  ||||||||||||||| |||||||||||||||||| | ||||||||||  | || ||| | | ||||||||||||||||    
T  22114738 atttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaact 22114836  T
Q  221 ctcaca 226  Q
    ||||||    
T  22114837 ctcaca 22114842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4308572 - 4308615
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4308572 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 4308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 7606881 - 7606963
Alignment:
Q  144 aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctcaca 226  Q
    |||||||||||||||| ||||||||||||||||||| |||||| |||  | |||||| | | ||||||||||||||||||||||    
T  7606881 aaaactgaaacctcca-tcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcaca 7606963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51727297 - 51727340
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  51727297 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 51727340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53896487 - 53896557
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| |||||||||||||||||||||||| |||||   ||||||||| || || ||||||||    
T  53896487 ctcaaagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 53896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 25388851 - 25388794
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  25388851 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 25388794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 5899576 - 5899497
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgcca 189  Q
    ||||||||||| |||||||| ||||||||||||  |||||| |||| ||| |||||||||||||||||  |||||||||||    
T  5899576 ccatcgtgccatgatttttccagtgccttgcctaaaaaactaaaacatcc-atcgtgccacgttgcccttcaatcgtgcca 5899497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 25690651 - 25690690
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaagt 25690690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53597207 - 53597164
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  53597207 ctcaaggtttactctgatacaaggtctatatttatagtaaaagt 53597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 50493960 - 50493895
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||| |||||||||||||||||||||||| |||||   ||||||||| || || ||||||||    
T  50493960 agtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 50493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 27101483 - 27101519
Alignment:
Q  8 tttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27101483 tttgctctgatacaaggtctatatttatagtgaaagt 27101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 27101558 - 27101594
Alignment:
Q  8 tttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27101558 tttgctctgatacaaggtctatatttatagtgaaagt 27101594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 38210321 - 38210265
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctg 70  Q
    ||||||||||| ||||||||||||||||||| | ||||||||| || || |||||||    
T  38210321 ctgatacaaggcctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctg 38210265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 746717 - 746674
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  746717 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 746674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1313376 - 1313333
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||    
T  1313376 ctcaaggtttactctgattcaaggtctatatttatagtaaaagt 1313333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4104190 - 4104233
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  4104190 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 4104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10621833 - 10621876
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  10621833 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 10621876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23633426 - 23633383
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  23633426 ctcaaggtttactctgatacaaagtctatatttatagtaaaagt 23633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25533400 - 25533357
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  25533400 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 25533357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29956630 - 29956587
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||    
T  29956630 ctcaaagtttgctctaatacaaagtctatatttatagtgaaagt 29956587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30005785 - 30005742
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||    
T  30005785 ctcaaagtttgctctaatacaaagtctatatttatagtgaaagt 30005742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35918240 - 35918283
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||| |||||| |||||||||||||||||||||||| |||||    
T  35918240 ctcaaaatttgctatgatacaaggtctatatttatagtgaaagt 35918283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 43226048 - 43226009
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  43226048 aagtttgctctgatacaatgtctatatttatagtgaaagt 43226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 43228253 - 43228214
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  43228253 aagtttgctctgatacaatgtctatatttatagtgaaagt 43228214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 455856 - 455826
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  455856 ctgatacaaggtctatatttatagtaaaagt 455826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 458233 - 458203
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  458233 ctgatacaaggtctatatttatagtaaaagt 458203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 6063889 - 6064006
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgca-gatcttga 207  Q
    |||||||||||||||||||  ||||||||| ||  |||||| |||||||| || |||||||||||||  || ||||||||||  | |||||  | | |||    
T  6063889 ccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctcc-attgtgccacgttgccttgccatcgtgccacgattctgcataaacctga 6063987  T
Q  208 ttttaagttaactctcaca 226  Q
    ||||||||||| |||||||    
T  6063988 ttttaagttaattctcaca 6064006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 9666947 - 9666993
Alignment:
Q  144 aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||||||||    
T  9666947 aaaactgaacccttcaatcgtgccacgttgccctgcaaacgtgccac 9666993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 26762919 - 26762837
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttt 95  Q
    ||||||||||||| |||||||||||||||||  || || |||| |||||| ||||||   | ||||||||| |||| ||||||    
T  26762919 tctgatacaaggtttatatttatagtaaaagcatccctaaaaaattggaacaaatctaagcccaaaaaatacgtttatgtttt 26762837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 47149203 - 47149233
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||||||||||||||||||||||||    
T  47149203 tctgatacaaggtctatatttatagtaaaag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 25388714 - 25388654
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacg 170  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||    
T  25388714 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacg 25388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 42990234 - 42990205
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  42990234 tgatacaaggtctatatttatagtaaaagt 42990205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 51943331 - 51943294
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  51943331 gtttactctgattcaaggtctatatttatagtaaaagt 51943294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 53915793 - 53915830
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  53915793 gtttactctgattcaaggtctatatttatagtaaaagt 53915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 4663879 - 4663843
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  4663879 gtttactctgatacaatgtctatatttatagtaaaag 4663843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6561776 - 6561740
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatag 37  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  6561776 ctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 25388795 - 25388721
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 124  Q
    ||||||||| || || |||||||| | |||||| ||||||| | |||||  ||||||||||||||||||||||||||    
T  25388795 gcttaaaatctgtaacaaatctgctcccaaaaa-tatgttt-tatttttatctgccagcgcaccatcgtgccacgat 25388721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 11434991 - 11434769
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11434991 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgctgcca 11434893  T
Q  105 gcgcaccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-a 201  Q
    ||||||||||||||||||||||||| |||| |||||||   ||||||||||||||| |||||||||||||||||||| ||||| ||||  | |||||| |    
T  11434892 gcgcaccatcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgtaccacgattctgcagaa 11434794  T
Q  202 tcttgattttaagttaactctcaca 226  Q
     | ||||||||||||||||||||||    
T  11434793 acctgattttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 22801155 - 22801342
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||  || ||||||||| || |||    
T  22801155 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcactcaaaa--tacgtttctgttatttgct 22801252  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    ||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||||||||| | ||||||||||    
T  22801253 gccggcgcaccatcgtgccacgatttttccagttccttgcctcaaaactgaaacctccaatcgtgtcacgttgcccaaccatcgtgccac 22801342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 31849897 - 31850138
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccag 105  Q
    ||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  31849897 agtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgccag 31849995  T
Q  106 cgcaccat---------------------cgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 184  Q
    ||||||||                     ||||||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  31849996 cgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgccccaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 31850095  T
Q  185 tgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  31850096 tgccacaattcctgcagatcttgattttaagttaactctcaca 31850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 7941353 - 7941133
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagc 106  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||   |||||    
T  7941353 gtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgtcaccagc 7941255  T
Q  107 gcaccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atc 203  Q
    ||||||||||||||| ||||||| ||||||||||||   ||||||||||||||| |||||||||||||||||||| ||||||||||  | |||||| | |    
T  7941254 gcaccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgtgccacgattctgcagaaac 7941156  T
Q  204 ttgattttaagttaactctcaca 226  Q
     ||||||||||||||||||||||    
T  7941155 ctgattttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5198460 - 5198217
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  5198460 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgct 5198362  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||||                     |||||||||||||||||||| || || |||||| |||  ||||| |||||||||||||||||||||||||    
T  5198361 gccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgcctcaaacttgaaatctccaatcgtgccacgttgcccagc 5198262  T
Q  180 aatcgtgcca-cattcctgcagatcttgattttaagttaactctc 223  Q
    |||| || ||  |||||||||||||||||||||||||||||||||    
T  5198261 aatcatgtcatgattcctgcagatcttgattttaagttaactctc 5198217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9148291 - 9148054
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||  || ||||||||| || |||    
T  9148291 ctcaaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa--tacgtttctgttatttgct 9148194  T
Q  101 gccagcg-------------caccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgc 187  Q
    |||| ||             | |||||||||||||||||||| ||||| |||||| |||  ||||||||||||||| ||||||||||||||||||||| |    
T  9148193 gccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgcgccacgttgcccagcaatcgtac 9148094  T
Q  188 cac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||| ||||||| ||||||||||||||||||||||||||||    
T  9148093 cacgattcctgaagatcttgattttaagttaactctcaca 9148054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 38409239 - 38409117
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||     
T  38409239 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgcc 38409141  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    |||| |||||||||||||||||||    
T  38409140 gccaacgcaccatcgtgccacgat 38409117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 22044687 - 22044930
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  22044687 aagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact--aaaaatatgtttctgtttttccctgcca 22044784  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgcct---taaaactgaaacctccaatcgtgccacgttgcccagca 180  Q
    || ||                     |||||||||||||||||||| ||||||||||||    |||| |||||||||| |||||||||||||||||  ||    
T  22044785 gcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaacctcc-atcgtgccacgttgcccttca 22044883  T
Q  181 atcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  22044884 atcgtgccacgattcctgcagatcttgattttaagttaactctcaca 22044930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 24888832 - 24888714
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  24888832 aagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgctgcca 24888734  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    || |||||||||||||||||    
T  24888733 gcacaccatcgtgccacgat 24888714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5637762 - 5638006
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |  |||||| ||||||||||||||||    
T  5637762 ctcaaagtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc--aaaatacgtttctgtttttcgct 5637859  T
Q  101 gccagcgcaccatcgtgccac---------------------gatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||| ||||||| ||||||                     |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5637860 gccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgcctcaaaactgaaacctcc-atcgtgccacgttgcccagc 5637958  T
Q  180 aatcgtgccac-attcctgcag-atcttgattttaagttaactctcaca 226  Q
    ||||||||||| ||||| |||| | | ||||||||||||||||||||||    
T  5637959 aatcgtgccacgattcc-gcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 36919881 - 36920125
Alignment:
Q  2 tcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctg 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| ||||||  | |||||||    
T  36919881 tcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctactattcgctg 36919979  T
Q  102 ccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagca 180  Q
    ||||||||                     |||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||     
T  36919980 ccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttgcctcaaaattgaaacctccaatcgtgccacgttgcccagcc 36920079  T
Q  181 atcgtgccacattcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||||||  |  |||||| | ||||||||||||||||||||||    
T  36920080 atcgtgccacgattttgcagaacctgattttaagttaactctcaca 36920125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 51015282 - 51015164
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||    
T  51015282 aagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact-gaaaaatatgtttctgttattcgctgcca 51015184  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  51015183 gcgcaccatcgtgccacgat 51015164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22803027 - 22803148
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||| |||| |||| ||||||    
T  22803027 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc--aaaatacgtttttgttattcgct 22803124  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  22803125 gccagcgcaccatcgtgccacgat 22803148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 36921788 - 36922034
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| || ||||||| ||||||||| ||||||    
T  36921788 ctcaaagtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgca-tccaaaaatacgtttctgttattcgct 36921886  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    ||||  |||                     |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  36921887 gccaatgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttgcctcaaaactgaaacctccaatcgtgccatgttgcccagc 36921986  T
Q  180 aatcgtgccacattcctgcagatcttgattttaagttaactctcacat 227  Q
     ||||| ||||  |  |||||| | |||||||||||||||||||||||    
T  36921987 catcgtaccacgattttgcagaacctgattttaagttaactctcacat 36922034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 48486359 - 48486113
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| || ||||||||| ||||||    
T  48486359 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa-tacgtttctgttattcgct 48486261  T
Q  101 gccagcgcaccat---------------------cgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||||||||                     ||||||||||    || |||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  48486260 gccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccacgttgctcagc 48486161  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
     |||||||||| ||| ||||||  | ||||||||||||||||||||||    
T  48486160 catcgtgccacgatttctgcaggacctgattttaagttaactctcaca 48486113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 22046982 - 22047099
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  22046982 aagtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact--aaaaatatgtttctgtttttccctgcca 22047079  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    || |||||||||||||||||    
T  22047080 gcacaccatcgtgccacgat 22047099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 24880487 - 24880371
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||| ||||||||| ||||||||||    
T  24880487 aagtttactccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-tccaaaaatacgtttctgttattcgctgcca 24880389  T
Q  105 gcgcaccatcgtgccacg 122  Q
    ||||||||||||||||||    
T  24880388 gcgcaccatcgtgccacg 24880371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 37089680 - 37089789
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccat 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||||| ||||||||| ||||| |||||||||||||    
T  37089680 ctgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcac-ctaaaaatacgtttctgttattcgccgccagcgcaccat 37089778  T
Q  114 cgtgccacgat 124  Q
    |||||||||||    
T  37089779 cgtgccacgat 37089789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 9174443 - 9174561
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||||  || || |||||||||| | ||||||||||||||||||||| ||||||    
T  9174443 aagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgcac-ccaaaaatatgtttctgtttttccctgcca 9174541  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  9174542 gcgcaccatcgtgccacgat 9174561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 11006546 - 11006656
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcacca 112  Q
    |||||||||||||||||||||||||||||||| | ||||||||| || || |||||||||| | |||||||||||||||||||| |||||||||||||||    
T  11006546 tctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcac-ccaaaaatatgtttctgttttttgctgccagcgcacca 11006644  T
Q  113 tcgtgccacgat 124  Q
    ||||||||||||    
T  11006645 tcgtgccacgat 11006656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 619740 - 619860
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  || | ||||||||||||||||| |||||     
T  619740 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctac-ccaaaaatatgtttctgttattcgcc 619838  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||||||||||| ||||||||    
T  619839 gccagcgcaccattgtgccacg 619860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 3824877 - 3825112
Alignment:
Q  12 ctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcacc 111  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| | ||||||| ||||||||| ||||  |||| ||||||    
T  3824877 ctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgtcgccaacgcacc 3824975  T
Q  112 atcgtgccac---------------------gatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    ||||||||||                     |||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||| |||    
T  3824976 atcgtgccacgatgcgaccccattgtgccatgatttttccagtgctttgcctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgtgtcac 3825075  T
Q  191 attcctgcag-atcttgattttaagttaactctcaca 226  Q
      | |||||| | | ||||||||||||||||||||||    
T  3825076 gattctgcagaaacctgattttaagttaactctcaca 3825112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 24879025 - 24878909
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| | ||||||| ||||||||| |||| |||||    
T  24879025 aagtttactcggatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcac-ccaaaaatacgtttctgttattcgatgcca 24878927  T
Q  105 gcgcaccatcgtgccacg 122  Q
    ||| ||||||||||||||    
T  24878926 gcgtaccatcgtgccacg 24878909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 47274767 - 47274647
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| | ||||||| |||| |||| ||||||    
T  47274767 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcac-ccaaaaatacgtttatgttattcgct 47274669  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    |||| |||||||||||||||||    
T  47274668 gccatcgcaccatcgtgccacg 47274647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 52942756 - 52942860
Alignment:
Q  17 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgt 116  Q
    |||||||||||||||||||||| ||||| |  |||||||||||||| |||||||||| |||||||||||||| |||| ||||||||||||||| ||||||    
T  52942756 atacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcac-caaaaaatatgtttatgttattcgctgccagcgcatcatcgt 52942854  T
Q  117 gccacg 122  Q
    ||||||    
T  52942855 gccacg 52942860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 24888707 - 24888594
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgat 208  Q
    |||||||||||||||||||| ||||| |||||| |||  ||||||||||||||||||||||||||| ||| ||||||||||| | |||||||  | ||||    
T  24888707 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgat 24888608  T
Q  209 tttaagttaactct 222  Q
    ||||||||||||||    
T  24888607 tttaagttaactct 24888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 38409110 - 38408993
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgat 208  Q
    |||||||||||||||||||| ||||| |||||| |||  |||||||||||||||||||||| |||||||||||||||||||  | |||||||  | | ||    
T  38409110 ccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctaat 38409011  T
Q  209 tttaagttaactctcaca 226  Q
    ||||||||||||||||||    
T  38409010 tttaagttaactctcaca 38408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 40091708 - 40091828
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||  ||||||| ||||  ||| ||||||    
T  40091708 ctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcact-gaaaaatacgtttacgttattcgct 40091806  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    | ||| ||||||||||| ||||    
T  40091807 gtcagtgcaccatcgtgtcacg 40091828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8756543 - 8756653
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| | | ||||||||||||||| |||||     
T  8756543 ctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatctgcac-cgagaaatatgtttctgttattcgcc 8756641  T
Q  101 gccagcgcacca 112  Q
     |||||||||||    
T  8756642 tccagcgcacca 8756653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 18847042 - 18846923
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag----atctt 205  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||| | |||| ||||||||||||  | ||||||    ||| |    
T  18847042 ccatcgtaccacgatttttccagtaccttgcctcaaaactgaaacctccaatcgtgccacgattcccaacaatcgtgccacgattctgcagaaaaatc-t 18846944  T
Q  206 gattttaagttaactctcaca 226  Q
    |||||||||||||||||||||    
T  18846943 gattttaagttaactctcaca 18846923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 22803162 - 22803235
Alignment:
Q  117 gccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  22803162 gccacgatttttccagtgcctttcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccac 22803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 11006663 - 11006781
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgc--agatcttg 206  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||||||||| ||||||||||  | ||||  | | | ||    
T  11006663 ccatcgtgccacgatttttccagtgccttgcctaaaaaattgaaacctcc-atcgtgccacgttgcccagcgatcgtgccacgattctgcataaaacctg 11006761  T
Q  207 attttaagttaactctcaca 226  Q
    ||||||||||||||||||||    
T  11006762 attttaagttaactctcaca 11006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 22048493 - 22048575
Alignment:
Q  144 aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  22048493 aaaactgaaacctcca-tcgtgccacgttgcccttcaatcgtgccacgattcttgcggatcttgattttaagttaactctcaca 22048575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 16932243 - 16932360
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||||||  |||||||||  | |||||| | | |||    
T  16932243 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 16932341  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  16932342 ttttaagttaactctcaca 16932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 16934597 - 16934715
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||| ||||||||||  |||||||||  | |||||| | | |||    
T  16934597 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccatgttgcccagccgtcgtgccacgattctgcagaaacctga 16934695  T
Q  208 ttttaagttaactctcacat 227  Q
    ||||||||||||||||||||    
T  16934696 ttttaagttaactctcacat 16934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 22783200 - 22783318
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    ||||||||||| |||||||| ||||||||| ||  |||||| |||||||| |||||||||||||||||||| ||||| ||||  | |||||| | | |||    
T  22783200 ccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctga 22783298  T
Q  208 ttttaagttaactctcacat 227  Q
    ||||||||||||||||||||    
T  22783299 ttttaagttaactctcacat 22783318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 9176918 - 9177035
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| |||||||||||||||| | |  |||||||||  | |||||| | | |||    
T  9176918 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctga 9177016  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  9177017 ttttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 22780835 - 22780952
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    ||||||||||| |||||||| ||||||||| ||  |||||| |||||||| |||||||||||||||||||| ||||| ||||  | |||||| | | |||    
T  22780835 ccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctga 22780933  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  22780934 ttttaagttaactctcaca 22780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 9176852 - 9176911
Alignment:
Q  64 aaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 124  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  9176852 aaatctgcacccaaaa-atatgtttctgtttttccctgccagcgcaccatcgtgccacgat 9176911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 11008932 - 11009007
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 124  Q
    ||||||||| || || |||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  11008932 gcttaaaatctgtaacaaatctgcacccaaaa-atatgtttctgttttttgctgccagtgcaccatcgtgccacgat 11009007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 52942890 - 52943002
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgat 208  Q
    ||||||||||||||  | |  |||| ||||||| ||| |||||||||||||||||||||||||||||| | |||||||||| |||  |||| | | ||||    
T  52942890 ccatcgtgccacgaaatattcagtgacttgcctcaaagctgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatttttgcaaaacctgat 52942989  T
Q  209 tttaagttaactc 221  Q
    |||||||||||||    
T  52942990 tttaagttaactc 52943002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17662531 - 17662574
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17662531 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 17662574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16934436 - 16934506
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || ||||||||    
T  16934436 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18847193 - 18847123
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||| | |||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  18847193 ctcaaagtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 18847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 9174580 - 9174684
Alignment:
Q  122 gatttttcaagtgccttgcctta-aaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatcttgattttaagttaact 220  Q
    |||||||| |||||||||||| | ||||| ||||||||| |||||| |||||||| |||  |||||||||  | ||||||| | ||||||||||||||||    
T  9174580 gatttttccagtgccttgcctaataaactaaaacctcca-tcgtgctacgttgcctagccgtcgtgccacgattctgcagaacctgattttaagttaact 9174678  T
Q  221 ctcaca 226  Q
    ||||||    
T  9174679 ctcaca 9174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 619895 - 619987
Alignment:
Q  136 cttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcacat 227  Q
    ||||||| ||||||||||| |||||| ||||||||||| ||  ||||||||| || |||||| || | | |||||||||||||||||||||||    
T  619895 cttgcctcaaaactgaaacatccaattgtgccacgttgaccttcaatcgtgcgacaattcctacataacctgattttaagttaactctcacat 619987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 18847124 - 18847049
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 124  Q
    |||| ||||||| || |||||||||| |||||| |||||||||||||||| | || |||||||||||||||||||||    
T  18847124 gctttaaatttgtaacaaatctgcacccaaaaa-tatgtttctgtttttccccgcgagcgcaccatcgtgccacgat 18847049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2485166 - 2485209
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  2485166 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 2485209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6764879 - 6764836
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  6764879 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 6764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16932082 - 16932152
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||   ||||||||| || || ||||||||    
T  16932082 ctcaaagtttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16932152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 11008876 - 11008933
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  11008876 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 11008933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 40091871 - 40091952
Alignment:
Q  144 aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctca 224  Q
    |||||||||| |||||||||||||||||| |||| | | |||||||| |||  |||||| | ||||||||||||||||||||    
T  40091871 aaaactgaaatctccaatcgtgccacgttacccaaccaccgtgccacgattattgcagaacctgattttaagttaactctca 40091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14633360 - 14633317
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  14633360 ctcaaagtttactctgatacaaggtctatatttatagtgaaagt 14633317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 40637110 - 40637071
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  40637110 aagtttgctctgatacaaggtctatatttatagtgaaagt 40637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44600131 - 44600174
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  44600131 ctcaaagtttgctttaatacaaggtctatatttatagtaaaagt 44600174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 47868437 - 47868398
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  47868437 aagtttgctctgatacaaggtctatatttatagtgaaagt 47868398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 51015144 - 51015042
Alignment:
Q  123 atttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgattttaagttaact 220  Q
    ||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||  || ||| ||||||  | |||||||  | ||||||||||||||||    
T  51015144 atttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcatgccacgattctgcagaaatctgattttaagttaact 51015046  T
Q  221 ctca 224  Q
    ||||    
T  51015045 ctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 9176771 - 9176821
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaa 55  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||||||    
T  9176771 aagtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaa 9176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40999240 - 40999308
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    ||||| |||| |||||||| ||||| |||||||||||||||| |  | |||||||||||||| ||||||    
T  40999240 ctcaaggtttactctgatataaggtttatatttatagtaaaaataacccttaaaatttggaacaaatct 40999308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 52043735 - 52043791
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    |||||||||||||||||||||||||||||||  || || |||| |||||| ||||||    
T  52043735 tctgatacaaggtctatatttatagtaaaagcatccctaaaaaattggaacaaatct 52043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8631716 - 8631759
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||    
T  8631716 ctcaaagtttgctttgatacaaagtctatatttatagtgaaagt 8631759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14787726 - 14787769
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||  | ||||||||||||||||||||||||||||||    
T  14787726 ctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 14787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16186130 - 16186173
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  16186130 ctcaaggtttactctgatacaaggtttatatttatagtaaaagt 16186173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22132692 - 22132735
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  22132692 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 22132735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 24878879 - 24878836
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgc 174  Q
    |||| ||||| | |||||||||||||||||||||||||||||||    
T  24878879 agtgacttgcgtcaaaactgaaacctccaatcgtgccacgttgc 24878836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25357677 - 25357634
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| || ||||||||||||||||||||||||||||||    
T  25357677 ctcaaggtttactttgatacaaggtctatatttatagtaaaagt 25357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47211039 - 47211082
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  47211039 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 47211082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53405167 - 53405124
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  53405167 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 53405124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18537764 - 18537806
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  18537764 ctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 24880341 - 24880299
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttg 173  Q
    |||| ||||||| |||||||||||||||| |||||||||||||    
T  24880341 agtgacttgcctcaaaactgaaacctccattcgtgccacgttg 24880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 11009014 - 11009051
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaa 147  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  11009014 ccatcgtgccacgatttttccagtgccttgcctaaaaa 11009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 22134937 - 22134966
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  22134937 tgatacaaggtctatatttatagtaaaagt 22134966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 24348240 - 24348211
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  24348240 tgatacaaggtctatatttatagtaaaagt 24348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Complemental strand, 28453715 - 28453686
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaa 42  Q
    ||||||||||||||||||||||||||||||    
T  28453715 tctgatacaaggtctatatttatagtaaaa 28453686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 22780688 - 22780744
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||| ||||||||||||||||||   ||||||||| || || ||||||||    
T  22780688 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 22783053 - 22783109
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||| ||||||||||||||||||   ||||||||| || || ||||||||    
T  22783053 tgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 25921766 - 25921994
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||||    
T  25921766 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgct 25921864  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgc 198  Q
    | ||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||| |||||||||||||| ||| | ||||||||||  | ||||    
T  25921865 gtcagcgcaccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgtccaaccatcgtgccacgattctgc 25921963  T
Q  199 ag-atcttgattttaagttaactctcacata 228  Q
    || | | ||||||||||||||||||||||||    
T  25921964 agaaacctgattttaagttaactctcacata 25921994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 2174901 - 2174680
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||| || |||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2174901 aagtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgcca 2174803  T
Q  105 gcgcaccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-at 202  Q
    | ||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||  || ||||||||||  | |||||| |     
T  2174802 gtgcaccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaa 2174704  T
Q  203 cttgattttaagttaactctcaca 226  Q
    | ||||||||||||||||||||||    
T  2174703 cctgattttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 39798070 - 39797849
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||    
T  39798070 aagtttactctaatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcac-ccaaaaatatgtttctgttattcgctgcca 39797972  T
Q  105 gcgcaccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-at 202  Q
    |||||||||||||||| ||||||||  |||||||||||  ||||||||||||||| ||| |||||||||||||||| ||||||||||  |  ||||| |     
T  39797971 gcgcaccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctcc-atcatgccacgttgcccagccatcgtgccacgattatgcagaaa 39797873  T
Q  203 cttgattttaagttaactctcaca 226  Q
    | ||||||||||||||||||||||    
T  39797872 cctgattttaagttaactctcaca 39797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 4236611 - 4236374
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||| ||||||||||||| ||||||    
T  4236611 aagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc--aaaatacgtttctgtttttccctgcca 4236514  T
Q  105 gcgcaccatc---------------------gtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    ||||||||||                     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4236513 gcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagccatc 4236414  T
Q  184 gtgccacattcctgcagatct-tgattttaagttaactct 222  Q
    |||||||| | |||||||  | ||||||||||||||||||    
T  4236413 gtgccacaattctgcagaaatctgattttaagttaactct 4236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 38882087 - 38881845
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||| ||||    
T  38882087 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgccgcca 38881989  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaat 182  Q
    |||||                     |||||||||||||||||||| ||||||||||||  |||||| |||||||| |||||||||||||||||||||||    
T  38881988 gcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactaaaacctcc-atcgtgccacgttgcccagcaat 38881890  T
Q  183 cgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  38881889 cgtgccacgattcctgcagatcttgattttaagttaactctcaca 38881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31466271 - 31466496
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||  ||| || | ||| ||    
T  31466271 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcac-ccaaaaatacatttatggtattccct 31466369  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    ||||| |||||||||||||| |||||||| |||| ||||||| | ||||||||| ||  |||||||||||||||||  |||||||||||| |||||||||    
T  31466370 gccagtgcaccatcgtgccaagatttttccagtgacttgcctcataactgaaacatctcatcgtgccacgttgcccttcaatcgtgccacgattcctgca 31466469  T
Q  200 gatcttgattttaagttaactctcaca 226  Q
     | | ||||||||||||||||||||||    
T  31466470 aaacctgattttaagttaactctcaca 31466496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 12556216 - 12556441
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||| || | |||||||  |||||||| ||||||    
T  12556216 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctgtacac-aaaaatacatttctgttattcgct 12556314  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    ||||||||| |||||||||||||    || |||| ||||||| |||||||||||||||||| ||||||||||||||||| ||  |||||| ||| |||||    
T  12556315 gccagcgcatcatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaattgtgccacgttgcccagccattatgccacgatttctgca 12556414  T
Q  200 gatcttgattttaagttaactctcaca 226  Q
    || | ||||||||| ||||||||||||    
T  12556415 gaacctgattttaaattaactctcaca 12556441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21684754 - 21684876
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  21684754 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactc-aaaaatatgtttctgtttttcgct 21684852  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  21684853 gccagcgcaccatcgtgccacgat 21684876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 16776144 - 16776021
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatattt-atagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgc 99  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| |||||||||| |||||||||||||||||     
T  16776144 ctcaaagtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatcttcactcaaaaa-tatgtttctgtttttcga 16776046  T
Q  100 tgccagcgcaccatcgtgccacgat 124  Q
    |||||||||||||||||||||||||    
T  16776045 tgccagcgcaccatcgtgccacgat 16776021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 36402621 - 36402806
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||||| | ||||||| ||||||||| |||| |    
T  36402621 ctcaacgtttactctgatataaggtctatatttatagtaaaagtatcgcttaaaattt-gaacaaatctgcac-ccaaaaatacgtttctgttattcgtt 36402718  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgcc 188  Q
    |||| ||||||||||||||||||     | |||| ||||||| ||||||||||||||||||||||| | |||||||||| ||||||||    
T  36402719 gccaacgcaccatcgtgccacgaaaaaaccagtgacttgcctcaaaactgaaacctccaatcgtgctatgttgcccagccatcgtgcc 36402806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 2818629 - 2818847
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |  |||||| |||| |||| ||||||    
T  2818629 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccgaaaatacgtttttgttattcgct 2818727  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    |        ||||||||||||||    || |||| ||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||| ||| |||||    
T  2818728 g--------ccatcgtgccacgaaaaatccagtgacttgcctcaaaactgaaacctccaatcgtgccatgttgcctagccatcgtgccacgatttctgca 2818819  T
Q  200 gatcttgattttaag-ttaactctcaca 226  Q
    || | | |||||||| ||||||||||||    
T  2818820 gaacctaattttaagtttaactctcaca 2818847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 95 - 226
Target Start/End: Complemental strand, 659844 - 659713
Alignment:
Q  95 ttcgctgccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-att 193  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||| ||| |||||||||| |||    
T  659844 ttcgctgccagcgcaccatcgtgccacgatttttccagtgacttgcc-tcaaactgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatt 659746  T
Q  194 cctgcagatcttgattttaagttaactctcaca 226  Q
     ||||||| | ||||||||||||||||||||||    
T  659745 tctgcagaacctgattttaagttaactctcaca 659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 6756480 - 6756257
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  | ||||||||| |||||||| ||||||||||| |  ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  6756480 ctcaaagtttaatatgatacaagatctatattaatagtaaaagtataacttaaaatttggaataaatctgcac-caaaaaatacgtttctgttattcgct 6756382  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    |||||||||||||||||||||||    || |||| ||||||| |||  ||||||||| |||||||||| |||  ||||  |||||||||| ||| ||| |    
T  6756381 gccagcgcaccatcgtgccacgaaaaatccagtgacttgcctcaaagttgaaacctctaatcgtgccatgttatccaggcatcgtgccacgatttctgta 6756282  T
Q  200 gatcttgattttaagttaactctca 224  Q
    || | ||||||||| ||||| ||||    
T  6756281 gaacctgattttaaattaaccctca 6756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21948013 - 21947896
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  21948013 ctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatatgtttctgttattcgct 21947915  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||   |||||||||||||||    
T  21947914 gcca---caccatcgtgccacg 21947896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 34479811 - 34479972
Alignment:
Q  64 aaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatc 162  Q
    |||||||||| |||||| ||||||| | |||||  | ||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||| |||    
T  34479811 aaatctgcacccaaaaa-tatgttt-tatttttatccgccagcgcaccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctcc-atc 34479907  T
Q  163 gtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctcaca 226  Q
    ||||||||||||||||| ||||||||||  | |||||| | | ||||||||||||||||||||||    
T  34479908 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 34479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20507755 - 20507873
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||  |||||| |||||||| | | ||||||||||||||||| ||||||    
T  20507755 ctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaacaaatctgctc-ccaaaaatatgtttctgttattcgct 20507853  T
Q  101 gccagcgcaccatcgtgcca 120  Q
    || |||||||| ||||||||    
T  20507854 gctagcgcaccttcgtgcca 20507873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 34477515 - 34477632
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||| |||||||||||||||||||| ||||||||||  | |||||| | |||||    
T  34477515 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctcc-atcgtgccacgttgcccagccatcgtgccacgattctgcagaaacttga 34477613  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  34477614 ttttaagttaactctcaca 34477632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 20504361 - 20504452
Alignment:
Q  136 cttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  20504361 cttgcctcaaaactaaaacctccaatcgtgccacgttgcccagctatcgtgccacgatttctgcagaacctgattttaagttaactctcaca 20504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 18186491 - 18186588
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctcacat 227  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||  | |||||| | |||||||||||||||||||||||||    
T  18186491 agtgacttgcctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctcacat 18186588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 21947866 - 21947770
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||| ||| ||| |||||||||||||||||||||| ||||||||| ||| |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  21947866 agtgacttacctcaaaactgaaacctccaatcgtgtcacgttgcctagccatcgtgccacgatttctgcagaacctgattttaagttaactctcaca 21947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 20507910 - 20508001
Alignment:
Q  136 cttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| |||||| |||||||||||||||| |||||||||| | |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  20507910 cttgcctcaaaactaaaacctccaatcgtgctacgttgcccaactatcgtgccacgatttctgcagaacctgattttaagttaactctcaca 20508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 31544915 - 31544798
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||||||||||| ||||||||||  |  ||||| | | |||    
T  31544915 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctga 31544817  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  31544816 ttttaagttaactctcaca 31544798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 16775993 - 16775897
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||| |||||| |||  ||||||||||||||||| |||||||||  || |||||||||| ||||||||||||| |||||||||||||| |||||||    
T  16775993 agtgctttgcctcaaacttgaaacctccaatcgtgtcacgttgccttgccatcgtgccacgattcctgcagatcctgattttaagttaattctcaca 16775897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 31542559 - 31542442
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||||||||||| |||||| |||  |  ||||| | | |||    
T  31542559 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctga 31542461  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  31542460 ttttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31542721 - 31542651
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  31542721 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 31542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31545066 - 31544996
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  31545066 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 31544996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 659869 - 659929
Alignment:
Q  111 catcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgtt 172  Q
    ||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||    
T  659869 catcgtgccacgatttttccagtgacttgcctcaaa-ctgaaacctccaatcgtgccacgtt 659929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3373334 - 3373377
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  3373334 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 3373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4410043 - 4410000
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  4410043 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 4410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10529392 - 10529435
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  10529392 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 10529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23665124 - 23665081
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23665124 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 23665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23793463 - 23793506
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  23793463 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 23793506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39854470 - 39854427
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  39854470 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 39854427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 15354777 - 15354818
Alignment:
Q  3 caaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  15354777 caaagtttgctttgatacaaggtctatatttatagtaaaagt 15354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 15357053 - 15357094
Alignment:
Q  3 caaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  15357053 caaagtttgctttgatacaaggtctatatttatagtaaaagt 15357094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 31544997 - 31544929
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtg 117  Q
    ||||||||| || ||||||||||||| |||||| |||||||||||||||  | |||||||||||||||||    
T  31544997 gcttaaaatctgtaataaatctgcacccaaaaa-tatgtttctgtttttatccgccagcgcaccatcgtg 31544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 34477378 - 34477435
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||||||||||| |||||||||||||| ||||||||||| || || ||||||||    
T  34477378 ctgatacaaggtctatttttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 34477435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23667399 - 23667356
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  23667399 ctcaaagtttgctttgatacaaggtctatatttatagttaaagt 23667356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23742058 - 23742101
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  23742058 ctcaaagtttgctttgacacaaggtctatatttatagtaaaagt 23742101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26097719 - 26097676
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  26097719 ctcaaagtttactctgattcaaggtctatatttatagtaaaagt 26097676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 29748315 - 29748260
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatc 68  Q
    |||||||||||||||||||||||||||||||  || || ||||||||||| |||||    
T  29748315 tctgatacaaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 29748260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31179664 - 31179707
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  31179664 ctcaaagtttgctttgatacaatgtctatatttatagtaaaagt 31179707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 38960339 - 38960378
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  38960339 aagtttgctttgatacaaggtctatatttatagtaaaagt 38960378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 38960478 - 38960604
Alignment:
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgca 199  Q
    |||| |||||||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| |   |||||||  |||||||||  |  ||||    
T  38960478 gccaacgcaccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcaaagcccagccgtcgtgccacgattgtgca 38960576  T
Q  200 g-atcttgattttaagttaactctcaca 226  Q
    | | | ||||||||||||||||||||||    
T  38960577 gaaacctgattttaagttaactctcaca 38960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 10749622 - 10749505
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  10749622 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 10749524  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  10749523 ttttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 10757245 - 10757207
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  10757245 agtttgctttgatacaaggtctatatttatagtaaaagt 10757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 15354948 - 15355065
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  15354948 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 15355046  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  15355047 ttttaagttaactctcaca 15355065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 15357224 - 15357341
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  15357224 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 15357322  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  15357323 ttttaagttaactctcaca 15357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36208566 - 36208524
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  36208566 ctcaaggtttactctgatacaaggtctatatttatagtaaaag 36208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 34479739 - 34479796
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    |||||||||||||||| ||||||||||| || ||||||||||| || || ||||||||    
T  34479739 ctgatacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaatctgc 34479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 6745040 - 6745004
Alignment:
Q  8 tttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6745040 tttgctctgatacaaggtctatatttatagtgaaagt 6745004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 6747283 - 6747247
Alignment:
Q  8 tttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6747283 tttgctctgatacaaggtctatatttatagtgaaagt 6747247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18509612 - 18509652
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  18509612 ctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 21684905 - 21684969
Alignment:
Q  163 gtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctcaca 226  Q
    ||||||||||||||||| ||||||||||  | |||||| | | ||||||||||||||||||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 21684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 2144897 - 2144928
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||||    
T  2144897 tctgatacaaggtctatatttatagtaaaagt 2144928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10586825 - 10586782
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  10586825 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 10586782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15552221 - 15552178
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  15552221 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 15552178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27910431 - 27910388
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  27910431 ctcaaagtttaacctgatacaaggtctatatttatagtaaaagt 27910388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27912516 - 27912473
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  27912516 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 27912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 1189919 - 1189949
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||||||||||||||||||||||||    
T  1189919 tctgatacaaggtctatatttatagtaaaag 1189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20044996 - 20044954
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  20044996 ctcaaggtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 25803989 - 25803959
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  25803989 ctgatacaaggtctatatttatagtaaaagt 25803959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6661475 - 6661512
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagt 38  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  6661475 ctcaaggtttactctgatacaaggtctatatttatagt 6661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 10749767 - 10749730
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  10749767 gtttgctttgatacaaggtctatatttatactaaaagt 10749730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18466666 - 18466625
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaa 42  Q
    ||||||||||   |||||||||||||||||||||||||||||    
T  18466666 ctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 18468979 - 18468950
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  18468979 tgatacaaggtctatatttatagtaaaagt 18468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 18596627 - 18596590
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  18596627 gtttactctgattcaaggtctatatttatagtaaaagt 18596590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 26098550 - 26098587
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  26098550 gtttactctgattcaaggtctatatttatagtaaaagt 26098587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 31542625 - 31542573
Alignment:
Q  64 aaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtg 117  Q
    |||||||||| |||||| |||||||||||||||  | |||||||||||||||||    
T  31542625 aaatctgcacccaaaaa-tatgtttctgtttttatccgccagcgcaccatcgtg 31542573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18511507 - 18511547
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  18511507 ctcaaagtttagtctgatacaaggtctatatttatattaaa 18511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6823001 - 6822775
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| | |||||||  ||||| || |||||     
T  6823001 ctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacatttctattattcgcc 6822903  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgc 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||| |||||||||||||||||||| ||||||||||  | ||||    
T  6822902 gccagcgcaccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccagccatcgtgccacgattctgc 6822804  T
Q  199 ag-atcttgattttaagttaactctcaca 226  Q
    || | | ||||||||||||||||||||||    
T  6822803 agaaacctgattttaagttaactctcaca 6822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 28840664 - 28840418
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  28840664 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca-aaaatatgtttctgtttttcgct 28840566  T
Q  101 gccagcgcaccatcgtgccacg---------------------atttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||| |||||||||||||||                     ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||  ||    
T  28840565 gccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttgcctaaaaactgaaacctccaatcgtgccacgttgccttgc 28840466  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
     |||||||||| ||||||||||||| |||||||||||||||| |||||    
T  28840465 catcgtgccacgattcctgcagatcctgattttaagttaactttcaca 28840418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 38925773 - 38925996
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||   ||||||| ||||||    
T  38925773 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatctgcac-ccaaaaatacacttctgttgttcgct 38925871  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    |||| ||| |||||||||||| |    || |||  |||| || |||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||     
T  38925872 gccaacgccccatcgtgccacaaaaaatccagtaacttgtctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatttctgcg 38925971  T
Q  200 gatcttgattttaagttaactctca 224  Q
    || | ||||||||||||||||||||    
T  38925972 gaacctgattttaagttaactctca 38925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 47451634 - 47451405
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||| ||||||||| ||||||    
T  47451634 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgcac-caaaaaatacgtttctgttattcgct 47451536  T
Q  101 gccagcgcaccatcgtgccacgat---ttttcaagt-gccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcc 195  Q
    | ||||||||||||||||||||||    | ||| ||    |||||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||| |    
T  47451535 gtcagcgcaccatcgtgccacgatgcgatctcatgtatatttgcctcaaaactgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttc 47451436  T
Q  196 tgcagatcttgattttaagttaactctcaca 226  Q
    |||| |   |||||| |||||||||||||||    
T  47451435 tgcaaaatctgatttgaagttaactctcaca 47451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 15823528 - 15823285
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||| || ||||| |    
T  15823528 aagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-tccaaaaatatgtttctgttatttgctgcta 15823430  T
Q  105 gcgcaccatcgtgccacgat---------------------ttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    ||||||||||||||||||||                     ||||| ||||| |||||| |||  ||||||||||||||||||||||||||||||| |||    
T  15823429 gcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagccatc 15823330  T
Q  184 gtgccac-attcctgcagatcttgattttaagttaactctcacat 227  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  15823329 gtgccacgattcctgcagatcctgattttaagttaactctcacat 15823285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 28842479 - 28842233
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  28842479 ctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactca-aaaatatgtttctgtttttcgct 28842381  T
Q  101 gccagcgcac---------------------catcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||  |||                     ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||  ||    
T  28842380 gccaggacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcctaaaaactgaaacctccaatcgtgccacgtagccttgc 28842281  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
     |||||||||| |||||| |||||| |||||||||||||||| |||||    
T  28842280 catcgtgccacgattcctacagatcctgattttaagttaactttcaca 28842233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 226
Target Start/End: Complemental strand, 49687496 - 49687301
Alignment:
Q  31 tttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatttttca 130  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||| || |||| |||| ||||||| |||||||||||||||||||||    ||     
T  49687496 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa-tacgtttatgttattcgctgtcagcgcaccatcgtgccacgaaaaatcc 49687398  T
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||| ||| |||||| ||| || || | | ||||||||||||||||||||||    
T  49687397 agtgacttgcctcaaaactgaaacctccaattgtgccacgttgcccagccatcatgccacgatttctacataacctgattttaagttaactctcaca 49687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 41646906 - 41646786
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||| ||||||    
T  41646906 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-tccaaaaatatgtttctgttattcgct 41646808  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||| ||||||||||||||||    
T  41646807 gccagtgcaccatcgtgccacg 41646786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 20302445 - 20302323
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||| | ||||||||||||||||| |||||     
T  20302445 ctcaaagtttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaacaaatatgcac-ccaaaaatatgtttctgttattcgcc 20302347  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  20302346 gccagcgcaccatcgtgccacgat 20302323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 51750021 - 51749903
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||| ||||    
T  51750021 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgccgcca 51749923  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    |||||| |||||||||||||    
T  51749922 gcgcactatcgtgccacgat 51749903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 51752347 - 51752229
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| |||| |||| ||||| ||||    
T  51752347 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttatgttattcgccgcca 51752249  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  51752248 gcgcaccatcgtgccacgat 51752229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 13761819 - 13761577
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||| ||||| ||||    
T  13761819 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgccgcca 13761721  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaat 182  Q
    || ||                     |||||||||||||||||||| ||||||||||||  ||||||||||||||| ||| |||||||||||||||| ||    
T  13761720 gcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcatgccacgttgcccagccat 13761622  T
Q  183 cgtgccacattcctgcag-atcttgattttaagttaactctcaca 226  Q
    ||||||||  | |||||| | | ||||||||||||||||||||||    
T  13761621 cgtgccacgattctgcagaaacctgattttaagttaactctcaca 13761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6823870 - 6823748
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| | ||||||| |||| |||| |||||     
T  6823870 ctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttatgttattcgcc 6823772  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  6823771 gccagcgcaccatcgtgccacgat 6823748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 10400128 - 10400369
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccag 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||||| |||| |||| || ||||||||    
T  10400128 agtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttatgttatttgctgccag 10400226  T
Q  106 cgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 184  Q
    ||||                     ||||||||||||||| |||| ||||| |||||| |||  ||||||||||||||||||||||||||||||||||||    
T  10400227 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcccagcaatcg 10400326  T
Q  185 tgccac-attcctgcag-atcttgattttaagttaactctcaca 226  Q
    |||||| ||||| |||| | | ||||||||||||||||||||||    
T  10400327 tgccacgattcc-gcagaaacctgattttaagttaactctcaca 10400369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 28207361 - 28207481
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||| | |||| |||| |||||     
T  28207361 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaaa-acgtttatgttattcgcc 28207459  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||||||||||||||||||||    
T  28207460 gccagcgcaccatcgtgccacg 28207481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 39462505 - 39462385
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| |  |||||||||||||| |||||||||| ||||||||| ||||||||| ||| ||    
T  39462505 ctcaaagtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcacccaaaaaatacgtttctgttattcact 39462406  T
Q  101 gccagcgcaccatcgtgccac 121  Q
    || ||||||||||||||||||    
T  39462405 gcaagcgcaccatcgtgccac 39462385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13215067 - 13214947
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||| |||| || |||    
T  13215067 ctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttttgttatttgct 13214969  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    |||| | |||||||||||||||    
T  13214968 gccaacacaccatcgtgccacg 13214947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 14098265 - 14098452
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  | |||||||||||||||||||||||| ||||| |  ||||||||||||||  ||||||||| | ||||||| |||| |||| ||||||    
T  14098265 ctcaaagtttagtttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaa-caatctgcac-ccaaaaatacgtttatgttattcgct 14098362  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    |||||||||||||||||| ||||    || |||| ||||| | ||| ||||||||||||||||||||||| ||| || | ||||||||||    
T  14098363 gccagcgcaccatcgtgcaacgaaaaatccagtgacttgcgtcaaagctgaaacctccaatcgtgccacggtgctcaaccatcgtgccac 14098452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 30790689 - 30790808
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||| |||| |||||||| |     
T  30790689 ctcaaggtttactctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact-gaaaaatacgtttatgtttttcccc 30790787  T
Q  101 gccagcgcaccatcgtgccac 121  Q
     ||||||||||||||||||||    
T  30790788 tccagcgcaccatcgtgccac 30790808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 3579913 - 3580033
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||| ||| | ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||  |||||| |||| || | |||||     
T  3579913 ctcaaattttacgctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaatttgcactc-taaaatacgtttatgatattcgcc 3580011  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||||||||||||||||||||    
T  3580012 gccagcgcaccatcgtgccacg 3580033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 51749896 - 51749778
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttg 206  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||| |||||||||||| | ||||||||||  | |||||| | ||||    
T  51749896 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttg 51749798  T
Q  207 attttaagttaactctcaca 226  Q
    ||||||||||||||||||||    
T  51749797 attttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 51752222 - 51752104
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttg 206  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||| |||||||||||||||||| | ||||||||||  | |||||| | | ||    
T  51752222 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctg 51752124  T
Q  207 attttaagttaactctcaca 226  Q
    ||||||||||||||||||||    
T  51752123 attttaagttaactctcaca 51752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 16231518 - 16231378
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatttttcaagtgccttg-ccttaaa 146  Q
    ||||||||| || || |||||||||| |||||| ||||||| | |||||  | ||||||||||||||||||||||||||||| |||| |||| ||  |||    
T  16231518 gcttaaaatctgtaacaaatctgcacccaaaaa-tatgttt-tatttttatccgccagcgcaccatcgtgccacgatttttccagtgtcttgcccaaaaa 16231421  T
Q  147 actgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    ||| |||||||| ||||||||||||||||||||  |||||||||    
T  16231420 actaaaacctcc-atcgtgccacgttgcccagccgtcgtgccac 16231378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 3580050 - 3580159
Alignment:
Q  118 ccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagtt 216  Q
    |||||||||||| | || ||||||| | ||||||||| |||||| ||| |||||||||| ||||||||||||| ||||||||| | | ||||||||||||    
T  3580050 ccacgatttttccaatgacttgcctcataactgaaacatccaattgtgtcacgttgccctgcaatcgtgccacgattcctgcataacctgattttaagtt 3580149  T
Q  217 aactctcaca 226  Q
    ||||| ||||    
T  3580150 aactcccaca 3580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 47177194 - 47177078
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgat 208  Q
    |||||||||||||||||||| |||| ||||||  |||||| |||||||| |||||||||||||||||||   |||||||||  | |||||| | | ||||    
T  47177194 ccatcgtgccacgatttttccagtgtcttgcccaaaaactaaaacctcc-atcgtgccacgttgcccagtcgtcgtgccacgattctgcagaaacctgat 47177096  T
Q  209 tttaagttaactctcaca 226  Q
    ||||||||||||||||||    
T  47177095 tttaagttaactctcaca 47177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 39462349 - 39462257
Alignment:
Q  136 cttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcacat 227  Q
    ||||||| |||||||||||||| ||||||||||||||||||| | || ||| ||| ||| ||||||| | |||||||||||||||||||||||    
T  39462349 cttgcctcaaaactgaaacctctaatcgtgccacgttgcccaaccattgtgtcacgatttctgcagaacctgattttaagttaactctcacat 39462257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16231587 - 16231517
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  16231587 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 16231517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 47179545 - 47179428
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||  ||||||||| ||  |||||| |||||||| ||||||||||||||||||||  |||||||||  | |||||| | | |||    
T  47179545 ccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 47179447  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  47179446 ttttaagttaactctcaca 47179428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20291443 - 20291390
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaa 54  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  20291443 ctcaaaatttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaa 20291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16226153 - 16226085
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| || || ||||||    
T  16226153 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatct 16226085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 13214917 - 13214858
Alignment:
Q  131 agtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  13214917 agtgacttgcctcaaaactgaaacctccaatcgtgccacgttgcccaaccatcgtgccac 13214858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24325642 - 24325599
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24325642 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 24325599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 16226004 - 16225891
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||||||||| |  |||||||||  | |||||| | | |||    
T  16226004 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccaaccgtcgtgccacgattctgcagaaacctga 16225906  T
Q  208 ttttaagttaactct 222  Q
    |||||||||||||||    
T  16225905 ttttaagttaactct 16225891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 6823735 - 6823661
Alignment:
Q  116 tgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgcca 189  Q
    |||||||||||||| ||||||||||||   ||||||||||||||| |||||||||||||||||| | |||||||||    
T  6823735 tgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccaaccatcgtgcca 6823661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15295143 - 15295183
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15295143 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47177344 - 47177276
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || ||||||    
T  47177344 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 47177276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47179695 - 47179627
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || ||||||    
T  47179695 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 47179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2617502 - 2617460
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  2617502 ctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18800864 - 18800907
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  18800864 ctcaaggtttactctgatacaaggtctatatttatagtaaaagt 18800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 20291386 - 20291277
Alignment:
Q  122 gatttttcaagtgccttgccttaaaa--ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgattttaagttaa 218  Q
    |||||||| |||||| ||||| ||||  ||||||||||||  ||||||||||||||  || ||||||||||  | |||||||  | ||||||||||||||    
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccac-cgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaa 20291288  T
Q  219 ctctcacataa 229  Q
    |||||||||||    
T  20291287 ctctcacataa 20291277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 23783533 - 23783494
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  23783533 aagtttgctttgatacaaggtctatatttatagtaaaagt 23783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 23783355 - 23783238
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  23783355 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 23783257  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  23783256 ttttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 43104139 - 43104102
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| |||||||||||||||||||||||||||||||||    
T  43104139 gtttactctgatacaaggtctatatttatagtaaaagt 43104102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 13461357 - 13461393
Alignment:
Q  191 attcctgcagatcttgattttaagttaactctcacat 227  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13461357 attcctgcagatcctgattttaagttaactctcacat 13461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2510623 - 2510666
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  2510623 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 2510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9459718 - 9459761
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  9459718 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 9459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9463545 - 9463588
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  9463545 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 9463588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 12302817 - 12302848
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||||    
T  12302817 tctgatacaaggtctatatttatagtaaaagt 12302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 20302303 - 20302198
Alignment:
Q  123 atttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgattttaagttaac 219  Q
    ||||||| ||||||||||||   ||||||||||||||| ||||||||||||||||  || ||| |||| |  | |||||||  | |||||||||||||||    
T  20302303 atttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaac 20302205  T
Q  220 tctcaca 226  Q
    |||||||    
T  20302204 tctcaca 20302198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28998548 - 28998591
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||    
T  28998548 ctcaaagtttactctgattcaaagtctatatttatagtaaaagt 28998591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29004264 - 29004307
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||    
T  29004264 ctcaaagtttactctgattcaaagtctatatttatagtaaaagt 29004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46432023 - 46432066
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  46432023 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 46432066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47906250 - 47906207
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  47906250 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 47906207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 49495494 - 49495537
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  49495494 ctcaaggtttactctgatacaaagtctatatttatagtaaaagt 49495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14183881 - 14183923
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    ||||| |||| |||||||||| |||||||||||||||||||||    
T  14183881 ctcaaggtttactctgatacatggtctatatttatagtaaaag 14183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 31735833 - 31735863
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  31735833 ctgatacaaggtctatatttatagtaaaagt 31735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25251570 - 25251611
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaa 42  Q
    ||||| |||| ||||||||||| |||||||||||||||||||    
T  25251570 ctcaaggtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 48665151 - 48665114
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  48665151 gtttactctgattcaaggtctatatttatagtaaaagt 48665114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21948486 - 21948526
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    ||||||||||  | |||||||||||||||||||||||||||    
T  21948486 ctcaaagtttagtatgatacaaggtctatatttatagtaaa 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26613547 - 26613603
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    ||||||||||||||||||||||||| |||||  || || |||| |||||| ||||||    
T  26613547 tctgatacaaggtctatatttatagcaaaagaatccctcaaaaattggaacaaatct 26613603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39932057 - 39932017
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaa 41  Q
    ||||||||||  ||| |||||||||||||||||||||||||    
T  39932057 ctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 41646728 - 41646680
Alignment:
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcacat 227  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||||||||    
T  41646728 aatcgtgccacgatttctgcagaacatgattttaagttaactctcacat 41646680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 8e-64; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 42064473 - 42064231
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42064473 aagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcact-aaaaaatatgtttctgtttttcgctgcca 42064375  T
Q  105 gcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatc 183  Q
    |||||                     |||||||||||||||||||| ||||| |||||| |||  ||||||||||| |||| ||||||||||||||||||    
T  42064374 gcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttgcctcaaacttgaaacctccagtcgtaccacgttgcccagcaatc 42064275  T
Q  184 gtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  42064274 gtgccacgattcctgcagatcttgattttaagttaactctcaca 42064231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6264438 - 6264658
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||     
T  6264438 ctcaaagtttagtctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatctgcacccaaaa-atatgtttctgttattcgcc 6264536  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    || |  ||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||| |||||||||||||| | ||||||| || ||| |||||    
T  6264537 gctaatgcaccatcgtgccacgatttttccagtgacttgcctcaaaactgaaacatccaatcatgccacgttgcccaaccatcgtgcaacaatttctgca 6264636  T
Q  200 gatcttgattttaagttaactc 221  Q
    || | |||||||||||||||||    
T  6264637 gaacctgattttaagttaactc 6264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 43623866 - 43624085
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccag 105  Q
    ||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||||| |||||  || |||| |||| || ||||||||    
T  43623866 agtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaa--tacgtttatgttatttgctgccag 43623963  T
Q  106 cgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atct 204  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||   | |||||| | |     
T  43623964 cgcaccatcgtgccacgattttttcagtgccttgcctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgtgccatgattctgcagaaacc 43624063  T
Q  205 tgattttaagttaactctcaca 226  Q
    |||||||||||||||| |||||    
T  43624064 tgattttaagttaactttcaca 43624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 40032351 - 40032586
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||| | ||||||| ||||||||| ||||||    
T  40032351 ctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatctgcac-ccaaaaatacgtttctgttattcgct 40032449  T
Q  101 gccagcgca----------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac 190  Q
    |||||||||          ||||||||||||||    || |||| |||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  40032450 gccagcgcaccatcgtatcccatcgtgccacgaaaaatccagtgacttgtctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccac 40032549  T
Q  191 -attcctgcagatcttgattttaagttaactctcaca 226  Q
     ||| ||||||| | ||||||||||||||||||||||    
T  40032550 gatttctgcagaacctgattttaagttaactctcaca 40032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 18800608 - 18800819
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccat 113  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||  ||||||||||||||| |||||||  | ||||||||||    
T  18800608 ctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgcact-taaaaatatgtttctg-ttttcgcctctagcgcaccat 18800705  T
Q  114 cgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgatttta 212  Q
    |||||||| ||||||| |||| ||||| | | ||||||||| |||||||||| ||||||||||| ||| |||||||| ||| || |||| | ||||||||    
T  18800706 cgtgccacaatttttccagtgacttgcttcataactgaaacatccaatcgtgtcacgttgcccaacaaacgtgccacgatttctccagaacatgatttta 18800805  T
Q  213 agttaactctcaca 226  Q
    ||||||||||||||    
T  18800806 agttaactctcaca 18800819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 13910341 - 13910456
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13910341 aagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgctgcca 13910439  T
Q  105 gcgcaccatcgtgccac 121  Q
    |||||||||||||||||    
T  13910440 gcgcaccatcgtgccac 13910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 27104761 - 27104639
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||    
T  27104761 ctcaaagttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactca-aaaatatgtttatgtttttccct 27104663  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  27104662 gccagcgcaccatcgtgccacgat 27104639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21520988 - 21521234
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  ||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||| | ||||||| |||| |||| ||||||    
T  21520988 ctcaaagtttagtctgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatctgcac-ccaaaaatacgtttatgttattcgct 21521086  T
Q  101 gccagcgcaccatcgtgc---------------------cacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    ||||||||||||||||||                     ||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  21521087 gccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttgcttcaaaactgaaacctccaatcgtgccacgttgcccagc 21521186  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
     |||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  21521187 catcgtgccacgattcctgtagaacctgattttaagttaactctcaca 21521234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 19504642 - 19504760
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||| |||||||||| ||||  ||||    
T  19504642 aagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcac-ctaaaaatgtgtttctgttattcgtcgcca 19504740  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  19504741 gcgcaccatcgtgccacgat 19504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 24162505 - 24162627
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||| ||||||  | |||||     
T  24162505 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcac-ccaaaaatacgtttctaatattcgca 24162603  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    |||||||||| |||||||||||||    
T  24162604 gccagcgcacaatcgtgccacgat 24162627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6259108 - 6259351
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| | ||||||||||||||||| ||| |     
T  6259108 ctcaaagtttagtctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtctgcac-ccaaaaatatgtttctgttattcacc 6259206  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||||                     |||||||||||||||||||| |||| ||| ||| ||||||||||| |||||| |||||||||||| ||||    
T  6259207 gccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactttcctcaaaactgaaacatccaatagtgccacgttgcacagc 6259306  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctc 223  Q
     |||||||||| ||| ||||||| | |||||||||||||||||||    
T  6259307 catcgtgccacgatttctgcagaacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 19502308 - 19502426
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||  | ||||||||||||||||| ||||  ||||    
T  19502308 aagtttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggatcaaatctgca-accaaaaatatgtttctgttattcgtcgcca 19502406  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  19502407 gcgcaccatcgtgccacgat 19502426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22407702 - 22407822
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||| | ||||||| ||||||||| ||||||    
T  22407702 ctcacagtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgcac-ccaaaaatacgtttctgttattcgct 22407800  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    |||| |||||||||||||||||    
T  22407801 gccaacgcaccatcgtgccacg 22407822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22287629 - 22287749
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| || | |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| | ||| |||  ||| |||| ||||||    
T  22287629 ctcaaagtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcac-ccaaacatacatttttgttattcgct 22287727  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||||||||||| ||||||||    
T  22287728 gccagcgcaccatggtgccacg 22287749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 24162634 - 24162752
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct--taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttg 206  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||| |||||||||||||||||| | || |||||||  | |||||| | ||||    
T  24162634 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc-atcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttg 24162732  T
Q  207 attttaagttaactctcaca 226  Q
    ||||||||||||||||||||    
T  24162733 attttaagttaactctcaca 24162752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 27104632 - 27104519
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tga 207  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||||||||||  ||||||||||||  | |||||||  | |||    
T  27104632 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctga 27104534  T
Q  208 ttttaagttaactct 222  Q
    |||||||||||||||    
T  27104533 ttttaagttaactct 27104519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 19502433 - 19502550
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||  || ||||||||||  | |||||| | | |||    
T  19502433 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctga 19502531  T
Q  208 ttttaagttaactctcaca 226  Q
    ||||||||||||| |||||    
T  19502532 ttttaagttaactatcaca 19502550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 22407857 - 22407948
Alignment:
Q  136 cttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| ||||||||||| ||||||||||||| ||| |||  |||||||||||| ||||||||||| | | ||||||| ||||||||||||    
T  22407857 cttgcctcaaaactgaaacatccaatcgtgccatgttacccttcaatcgtgccacgattcctgcagaacctaattttaaattaactctcaca 22407948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 28462591 - 28462671
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttt 95  Q
    ||||||||||||| ||||||||||||||||||  | |||||||||||||| |||||||||||   ||||||||||||| ||||    
T  28462591 tctgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcact--gaaaatatgtttctatttt 28462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35107262 - 35107191
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgca 72  Q
    ||||| |||| || |||||||| ||||||||||||||||||||| || |||||||||||||| |||||||||    
T  35107262 ctcaaggtttactatgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgca 35107191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 45332389 - 45332439
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaa 55  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  45332389 aagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaa 45332439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 19504767 - 19504846
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgcca 189  Q
    |||||||||||||||||||| ||||||||||||  |||| | |||||||| ||||||||||||||||  || |||||||||    
T  19504767 ccatcgtgccacgatttttccagtgccttgcctaaaaaattaaaacctcc-atcgtgccacgttgccttgccatcgtgcca 19504846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5377726 - 5377769
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  5377726 ctcaaagtttgctctgaaacaaggtctatatttatagtgaaagt 5377769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 36559072 - 36559111
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  36559072 aagtttgctttgatacaaggtctatatttatagtaaaagt 36559111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 36561349 - 36561388
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  36561349 aagtttgctttgatacaaggtctatatttatagtaaaagt 36561388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45280278 - 45280321
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  45280278 ctcaaagtttgctctgatacaaggtatatatttatagtgaaagt 45280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 36559241 - 36559358
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  36559241 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 36559339  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  36559340 ttttaagttaactctcaca 36559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 33603870 - 33603791
Alignment:
Q  17 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttc 97  Q
    ||||||||| |||||||||||||||||| || || | || |||||| |||||| ||| |  ||||||||||||||||||||    
T  33603870 atacaaggtttatatttatagtaaaagtatccctaacaaattggaacaaatct-cacgctgaaaatatgtttctgtttttc 33603791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 35028529 - 35028473
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    |||||||||| ||||||||||||||||||||| || || |||| |||||| ||||||    
T  35028529 tctgatacaatgtctatatttatagtaaaagtatccctaaaaaattggaacaaatct 35028473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 44
Target Start/End: Original strand, 17897547 - 17897578
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||||    
T  17897547 tctgatacaaggtctatatttatagtaaaagt 17897578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23452534 - 23452577
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  23452534 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 23452577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35215889 - 35215932
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||   |||||||||||||||||||||||||||||||    
T  35215889 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 35215932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40699272 - 40699229
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||    
T  40699272 ctcaaggtttactctgatgcaaggtctatatttatagtaaaagt 40699229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 42452741 - 42452702
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  42452741 aagtttgctctgatacaatgtctatatttataataaaagt 42452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 43
Target Start/End: Complemental strand, 20589611 - 20589581
Alignment:
Q  13 tctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||||||||||||||||||||||||    
T  20589611 tctgatacaaggtctatatttatagtaaaag 20589581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22163240 - 22163282
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43  Q
    |||||||||| | ||||||||| ||||||||||||||||||||    
T  22163240 ctcaaagtttacactgatacaatgtctatatttatagtaaaag 22163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 45332558 - 45332675
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaa-ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagat-cttga 207  Q
    ||||||| |||||||||||| ||| |||||||  |||| || ||||||||| ||||||| ||  |||||||  |||||||||  | |||||||  | |||    
T  45332558 ccatcgttccacgatttttccagttccttgcccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattctgcagaaacctga 45332656  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  45332657 ttttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20147041 - 20147082
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaa 42  Q
    ||||| |||| || ||||||||||||||||||||||||||||    
T  20147041 ctcaaggtttactttgatacaaggtctatatttatagtaaaa 20147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 45156999 - 45156946
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatc 68  Q
    ||||| |||||||||||||||||||||||  || || ||||||||||| |||||    
T  45156999 tgatataaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 45156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2875 - 2629
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| |||| |||| ||||||    
T  2875 ctcaaagtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttatgttattcgct 2777  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagc 179  Q
    |||||||||                     |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  2776 gccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcctcaaaactgaaacctccaatcgtgccacgttgcctagc 2677  T
Q  180 aatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  2676 aatcgtgtcacaattcctgcagatcttgattttaagttaactctcaca 2629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 116; Significance: 5e-59; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 73320 - 73540
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| || ||||||| |||||||||||||||||||||| || |||||||||||||| |||||||||| |||||  |||||||||||||||||||    
T  73320 ctcaaagtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaatctgcacccaaaa--tatgtttctgtttttcgct 73417  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag 200  Q
    |||||| |||||||||||||| ||||||| ||||| |||||| |||  ||||||||||||||||||||||||||| ||| ||||||||||  | |||||     
T  73418 gccagcacaccatcgtgccacaatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcat 73517  T
Q  201 atct-tgattttaagttaactct 222  Q
    |  | ||||||||||||||||||    
T  73518 aaatctgattttaagttaactct 73540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 69588 - 69709
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||| |  |||||||||||||||||||||||    
T  69588 ctcaaagtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcaccc--aaaatatgtttctgtttttcgct 69685  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    |||||| ||||||||||| |||||    
T  69686 gccagcacaccatcgtgcaacgat 69709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 69726 - 69829
Alignment:
Q  120 acgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgattttaagttaa 218  Q
    |||||||||| ||||| |||||| |||  ||||||||||||||||||||||||||| ||| ||||||||||  | |||||||  | ||||||||||||||    
T  69726 acgatttttccagtgctttgcctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcagaaatctgattttaagttaa 69825  T
Q  219 ctct 222  Q
    ||||    
T  69826 ctct 69829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 32280014 - 32279794
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||| || ||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||| ||  ||| |||| ||||| ||||    
T  32280014 aagtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-tacatttatgttattcgccgcca 32279916  T
Q  105 gcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatc 203  Q
    ||||||||||||||||||| ||||| || | ||||||| | ||||||||| |||||||||||||||||||||| |||||||| |||  |||||||||| |    
T  32279915 gcgcaccatcgtgccacgacttttccagcgacttgcctcagaactgaaacatccaatcgtgccacgttgcccaacaatcgtgtcacgtttcctgcagaac 32279816  T
Q  204 ttgattttaagttaactctcaca 226  Q
     ||||||||||||||||||||||    
T  32279815 -tgattttaagttaactctcaca 32279794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 1072170 - 1072397
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||| | ||||||| |||| |||| ||||||    
T  1072170 ctcaaagtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttatgttattcgct 1072268  T
Q  101 gccagcgcaccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgca 199  Q
    |||  || |||||||||||||||    || | || ||||||| |||||| ||||||||||||||||||||||||||| | ||||| |||| ||| |||||    
T  1072269 gcctacgtaccatcgtgccacgaaaaatccaatgacttgcctcaaaacttaaacctccaatcgtgccacgttgcccaaccatcgtaccacgatttctgca 1072368  T
Q  200 gatcttgattttaagttaactctcacata 228  Q
    || | ||||||||||||||||||||||||    
T  1072369 gaacctgattttaagttaactctcacata 1072397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19227701 - 19227948
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||     
T  19227701 ctcaaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacccaaaaaatatgtttctgttattcgcc 19227800  T
Q  101 gccagcgca---------------------ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccag 178  Q
    |||||||||                     |||||||||||||||||||| ||||||||||||  |||| |||||||||| ||| ||||||||||||||     
T  19227801 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaacctcc-atcatgccacgttgcccaa 19227899  T
Q  179 caatcgtgccac-attcctgcagatcttgattttaagttaactctcaca 226  Q
    | |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19227900 ccatcgtgccacgattcctgcagatcttaattttaagttaactctcaca 19227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 8995495 - 8995251
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccag 105  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||  || ||||||||| || |||| |||    
T  8995495 agtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa--tacgtttctgttatttgctgtcag 8995398  T
Q  106 cgcaccatcgtgccacgat---------------------ttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 184  Q
    |||||||||||||||||||                     ||||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  8995397 cgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcccaaaaactgaaacctccaatcgtgccacgttgcccagccatcg 8995298  T
Q  185 tgccac-attcctgcagatcttgattttaagttaactctcacataaa 230  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||    
T  8995297 tgccacgattcctacagatcctgattttaagttaactctcacataaa 8995251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 9019942 - 9019698
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccag 105  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||  || ||||||||| || |||| |||    
T  9019942 agtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa--tacgtttctgttatttgctgtcag 9019845  T
Q  106 cgcaccatcgtgccacgat---------------------ttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 184  Q
    |||||||||||||||||||                     ||||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  9019844 cgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcccaaaaactgaaacctccaatcgtgccacgttgcccagccatcg 9019745  T
Q  185 tgccac-attcctgcagatcttgattttaagttaactctcacataaa 230  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||    
T  9019744 tgccacgattcctacagatcctgattttaagttaactctcacataaa 9019698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 11983326 - 11983444
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgcca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  11983326 aagtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatctgcactc-aaaaatatgtttctgtttttcgctgcca 11983424  T
Q  105 gcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||    
T  11983425 gcgcaccatcgtgccacgat 11983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 14507468 - 14507590
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  14507468 ctcaaagtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctacactc-aaaaatatgtttctgtttttcgct 14507566  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    | ||||||||||||||||||||||    
T  14507567 ggcagcgcaccatcgtgccacgat 14507590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 15530420 - 15530662
Alignment:
Q  6 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccag 105  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| | |||||||||||||| |  ||| |||||||    
T  15530420 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctgcac-ccaaaaatatgtttctataattcactgccag 15530518  T
Q  106 cgcaccatcgtgccacgat---------------------ttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 184  Q
    | |||||||||||||||||                     ||||| ||||| |||||| |||  ||||||||||||| |||||||||| |||||| ||||    
T  15530519 cacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttgcctcaaacttgaaacctccaattgtgccacgttacccagccatcg 15530618  T
Q  185 tgccac-attcctgcagatcttgattttaagttaactctcacat 227  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  15530619 tgccacgattcctgcagatcctgattttaagttaactctcacat 15530662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15541433 - 15541553
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||| | ||||||||||||||| | ||||||    
T  15541433 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatctgcac-ctaaaaatatgtttctgctattcgct 15541531  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||||| ||||||||||||||    
T  15541532 gccagcgtaccatcgtgccacg 15541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30729121 - 30729241
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||| | ||||||| ||||||||| ||||||    
T  30729121 ctcaaggtttactctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcac-ccaaaaatacgtttctgttattcgct 30729219  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    |||||||||| |||||||||||    
T  30729220 gccagcgcactatcgtgccacg 30729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15532974 - 15533094
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||| | |||||||||||||| || || |||    
T  15532974 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatctgcac-ctaaaaatatgtttctcttatttgct 15533072  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
     |||||||||||| ||| ||||    
T  15533073 accagcgcaccattgtgacacg 15533094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 4816689 - 4816749
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaaaactgaaacctccaatcgtgccacg 170  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||    
T  4816689 ccatcgtgccacgatttttccagtaccttgcctcaaaactgaaacctccaatcgtgccacg 4816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 14507634 - 14507716
Alignment:
Q  144 aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcagatct-tgattttaagttaactctcaca 226  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||  | |||||||  | ||||||||||||||||||||||    
T  14507634 aaaactgaaacctcc-atcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26068592 - 26068662
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || ||||||||    
T  26068592 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 26068662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 33308802 - 33308685
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||  |||||||  |||||||||  | |||||| | | |||    
T  33308802 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctga 33308704  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  33308703 ttttaagttaactctcaca 33308685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 33311071 - 33310954
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||||||  |||||||  |||||||||  | |||||| | | |||    
T  33311071 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctga 33310973  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  33310972 ttttaagttaactctcaca 33310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 24192635 - 24192707
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccac 121  Q
    ||||||||||||||| |||| |||||| |||| ||||||||||||| |||||||||||||| ||||| ||||||    
T  24192635 gcttaaaatttggaacaaatttgcactgaaaa-atatgtttctgttattcgctgccagcgccccatcatgccac 24192707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26066321 - 26066389
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    ||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || ||||||    
T  26066321 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 26066389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12195808 - 12195851
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  12195808 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 12195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4816538 - 4816608
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||   ||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  4816538 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 4816608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 24191538 - 24191603
Alignment:
Q  48 gcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatc 114  Q
    ||||||||||||||| |||| |||||| |||| ||||||||||||| |||||||||||||| |||||    
T  24191538 gcttaaaatttggaacaaatttgcactgaaaa-atatgtttctgttattcgctgccagcgccccatc 24191603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 26066494 - 26066611
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgccttaa-aactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| |||||||||||  || |||| |||||||| ||||||||||||||||  ||  |||||||||  | || ||| | | |||    
T  26066494 ccatcgtgccacgatttttccagtgccttgcccaaataactaaaacctcc-atcgtgccacgttgccttgccgtcgtgccacgattctacagaaacctga 26066592  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  26066593 ttttaagttaactctcaca 26066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 26068765 - 26068882
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||| ||||||||||||  ||  |||||||||  | |||||| | | |||    
T  26068765 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcatgccacgttgccttgccgtcgtgccacgattctgcagaaacctga 26068863  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  26068864 ttttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19704868 - 19704905
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagt 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19704868 ctcaaagtttgctctgatacaaggtctatatttatagt 19704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 20915664 - 20915721
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgc 71  Q
    ||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||    
T  20915664 ctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 20915721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 4816624 - 4816682
Alignment:
Q  64 aaatctgcactcaaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgat 124  Q
    |||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  4816624 aaatctgcac-caaaaaatatgtttctgttttt-gctaccagcacaccatcgtgccacgat 4816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1230542 - 1230585
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  1230542 ctcaaagtttgctatgatacaaggtctatatttatagtgaaagt 1230585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 14459058 - 14459093
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttata 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  14459058 ctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 28241618 - 28241657
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  28241618 aagtttgctctgatacaaggtctatatttatagtgaaagt 28241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29754989 - 29755032
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| |||||||| ||||||||||||||||||||||||||||||    
T  29754989 ctcagagtttgctttgatacaaggtctatatttatagtaaaagt 29755032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 29755162 - 29755279
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  29755162 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 29755260  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  29755261 ttttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12937501 - 12937559
Alignment:
Q  13 tctgatacaaggtctata--tttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    |||||||||| |||||||  |||||||||||||| || || ||||||||||||||||||    
T  12937501 tctgatacaatgtctatatatttatagtaaaagtatccctaaaaatttggaataaatct 12937559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18318047 - 18318004
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  18318047 ctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 18318004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26932863 - 26932906
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  26932863 ctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 26932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 12911770 - 12911812
Alignment:
Q  27 tatatttatagtaaaagtttcgcttaaaatttggaataaatct 69  Q
    |||||||||||||||||| || || ||||||||||||||||||    
T  12911770 tatatttatagtaaaagtatccctaaaaatttggaataaatct 12911812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 30034913 - 30034943
Alignment:
Q  14 ctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  30034913 ctgatacaaggtctatatttatagtaaaagt 30034943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 33308966 - 33308932
Alignment:
Q  10 tgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||||||||||||||||||||||||||    
T  33308966 tgctttgatacaaggtctatatttatagtaaaagt 33308932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 33311235 - 33311201
Alignment:
Q  10 tgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||||||||||||||||||||||||||    
T  33311235 tgctttgatacaaggtctatatttatagtaaaagt 33311201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 2629197 - 2629226
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  2629197 tgatacaaggtctatatttatagtaaaagt 2629226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 3028157 - 3028186
Alignment:
Q  15 tgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||||||||||||||||||||    
T  3028157 tgatacaaggtctatatttatagtaaaagt 3028186  T

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Target: scaffold0131 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15014 - 14894
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  15014 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcac-ccaaaaatatgtttctgttattcgct 14916  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    ||||||||||||||||| ||||    
T  14915 gccagcgcaccatcgtgtcacg 14894  T

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Target: scaffold0131; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 14869 - 14768
Alignment:
Q  126 tttcaagtgccttgccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcag-atcttgattttaagttaactctc 223  Q
    |||| |||| ||||||| | ||||||||| ||| ||||| |||||||||||  |||||||||||| |||||||||| ||| |||||||||||||||||||    
T  14869 tttccagtgacttgcctcataactgaaacttcccatcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactctc 14770  T
Q  224 ac 225  Q
    ||    
T  14769 ac 14768  T

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Target: scaffold0068 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 29156 - 29034
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  29156 ctcaaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactca-aaaatatgtttctgtttttcgct 29058  T
Q  101 gccagcgcaccatcgtgccacgat 124  Q
    ||||||||||||||||||||||||    
T  29057 gccagcgcaccatcgtgccacgat 29034  T

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Target: scaffold0068; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 29005 - 28941
Alignment:
Q  163 gtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctcaca 226  Q
    ||||||||||||||||| ||||||||||  | |||||| | | ||||||||||||||||||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 28941  T

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Target: scaffold0339 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 3992 - 3872
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctgcactcaaaaaatatgtttctgtttttcgct 100  Q
    ||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||| | ||||||| |||| |||| ||||||    
T  3992 ctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcac-ccaaaaatacgtttatgttattcgct 3894  T
Q  101 gccagcgcaccatcgtgccacg 122  Q
    |||| |||||||||||||||||    
T  3893 gccatcgcaccatcgtgccacg 3872  T

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Target: scaffold0127 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 12937 - 13054
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||  |  ||||||||||  | |||||| | | |||    
T  12937 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgccttgacatcgtgccacgattctgcagaaacctga 13035  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  13036 ttttaagttaactctcaca 13054  T

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Target: scaffold0552 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1124 - 1167
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  1124 ctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 1167  T

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Target: scaffold0472 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6194 - 6151
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  6194 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 6151  T

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Target: scaffold0472; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 6044 - 5927
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    ||||| |||||||||||||| ||||||||||||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  6044 ccatcatgccacgatttttccagtgccttgcctaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 5946  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  5945 ttttaagttaactctcaca 5927  T

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Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 22201 - 22162
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22201 aagtttgctttgatacaaggtctatatttatagtaaaagt 22162  T

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Target: scaffold0140; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 24476 - 24437
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  24476 aagtttgctttgatacaaggtctatatttatagtaaaagt 24437  T

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Target: scaffold0140; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 22032 - 21915
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  22032 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 21934  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  21933 ttttaagttaactctcaca 21915  T

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Target: scaffold0140; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 24307 - 24190
Alignment:
Q  110 ccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttga 207  Q
    |||||||||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  |||||||  |||||||||  |  ||||| | | |||    
T  24307 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctga 24209  T
Q  208 ttttaagttaactctcaca 226  Q
    |||||||||||||||||||    
T  24208 ttttaagttaactctcaca 24190  T

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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 41780 - 41819
Alignment:
Q  5 aagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  41780 aagtttgctctgatacaaggtctatatttatagtgaaagt 41819  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 183932 - 183975
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  183932 ctcaaagtttactctgatacaaggtctatatttatagtgaaagt 183975  T

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Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52004 - 51961
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||  | ||||||||||||||||||||||||||||||    
T  52004 ctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 51961  T

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Target: scaffold0511 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2031 - 1988
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||    
T  2031 ctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 1988  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 11772 - 11809
Alignment:
Q  7 gtttgctctgatacaaggtctatatttatagtaaaagt 44  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  11772 gtttactctgattcaaggtctatatttatagtaaaagt 11809  T

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Target: scaffold0133 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4809 - 4773
Alignment:
Q  1 ctcaaagtttgctctgatacaaggtctatatttatag 37  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  4809 ctcaaggtttactctgatacaaggtctatatttatag 4773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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