View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12448_low_19 (Length: 251)

Name: NF12448_low_19
Description: NF12448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12448_low_19
NF12448_low_19
[»] chr1 (41 HSPs)
chr1 (1-242)||(3544285-3544526)
chr1 (1-242)||(1247770-1248011)
chr1 (9-225)||(20987878-20988093)
chr1 (4-242)||(13867024-13867262)
chr1 (1-242)||(5809296-5809537)
chr1 (1-227)||(28358604-28358832)
chr1 (1-207)||(19014202-19014408)
chr1 (91-218)||(5497891-5498018)
chr1 (91-218)||(32352520-32352647)
chr1 (91-218)||(48072634-48072761)
chr1 (67-197)||(25504221-25504351)
chr1 (66-218)||(6051383-6051535)
chr1 (3-166)||(40562818-40562981)
chr1 (72-182)||(45271027-45271137)
chr1 (3-185)||(48434867-48435049)
chr1 (90-197)||(7395949-7396056)
chr1 (66-203)||(35541814-35541951)
chr1 (1-94)||(45795990-45796083)
chr1 (90-169)||(26721437-26721516)
chr1 (92-185)||(33259943-33260036)
chr1 (92-185)||(33280102-33280195)
chr1 (90-158)||(17708862-17708930)
chr1 (78-218)||(47622285-47622425)
chr1 (4-143)||(32642589-32642728)
chr1 (1-116)||(38070546-38070661)
chr1 (78-137)||(20796452-20796511)
chr1 (67-137)||(19042904-19042974)
chr1 (78-140)||(39431078-39431140)
chr1 (78-140)||(49264251-49264313)
chr1 (90-135)||(3074548-3074593)
chr1 (91-163)||(5283140-5283212)
chr1 (68-140)||(42475184-42475256)
chr1 (90-148)||(10710482-10710539)
chr1 (91-185)||(22191023-22191117)
chr1 (100-218)||(51052695-51052813)
chr1 (90-153)||(43943750-43943813)
chr1 (66-140)||(2654889-2654963)
chr1 (91-185)||(21409046-21409140)
chr1 (73-125)||(16586500-16586552)
chr1 (109-169)||(27889548-27889608)
chr1 (97-137)||(30650308-30650348)
[»] chr6 (38 HSPs)
chr6 (1-242)||(14843321-14843562)
chr6 (1-239)||(25350937-25351176)
chr6 (1-239)||(14686195-14686433)
chr6 (1-225)||(26514439-26514664)
chr6 (1-209)||(19350659-19350867)
chr6 (91-218)||(26206138-26206265)
chr6 (3-225)||(33640634-33640856)
chr6 (1-204)||(32186398-32186601)
chr6 (91-191)||(15674637-15674737)
chr6 (66-199)||(10362927-10363059)
chr6 (3-170)||(502788-502955)
chr6 (90-225)||(21629323-21629458)
chr6 (70-191)||(13563165-13563285)
chr6 (90-158)||(649341-649409)
chr6 (90-158)||(11060130-11060198)
chr6 (78-202)||(13938510-13938634)
chr6 (1-57)||(29976377-29976433)
chr6 (66-137)||(2554385-2554456)
chr6 (66-225)||(17576918-17577077)
chr6 (78-140)||(13086335-13086397)
chr6 (90-182)||(17605578-17605670)
chr6 (28-137)||(18681863-18681972)
chr6 (28-137)||(24766703-24766812)
chr6 (90-191)||(2923634-2923735)
chr6 (78-191)||(21549639-21549752)
chr6 (73-185)||(19616120-19616232)
chr6 (90-136)||(17078357-17078403)
chr6 (1-139)||(17712882-17713020)
chr6 (75-139)||(33753458-33753522)
chr6 (73-176)||(1307917-1308020)
chr6 (78-125)||(11469365-11469412)
chr6 (14-57)||(13563305-13563348)
chr6 (96-143)||(32198012-32198059)
chr6 (90-136)||(1104237-1104283)
chr6 (78-124)||(14372293-14372339)
chr6 (97-167)||(24573864-24573934)
chr6 (66-139)||(12673406-12673479)
chr6 (99-223)||(29824777-29824901)
[»] chr3 (47 HSPs)
chr3 (1-239)||(31675646-31675884)
chr3 (1-239)||(31920539-31920776)
chr3 (4-207)||(40512943-40513146)
chr3 (1-217)||(19875958-19876174)
chr3 (1-218)||(34830108-34830325)
chr3 (33-239)||(53941993-53942199)
chr3 (13-239)||(55367336-55367562)
chr3 (66-218)||(2365058-2365210)
chr3 (91-218)||(6175685-6175812)
chr3 (75-218)||(14309368-14309511)
chr3 (78-217)||(962372-962511)
chr3 (78-225)||(48569224-48569371)
chr3 (70-199)||(17270969-17271098)
chr3 (66-218)||(34332023-34332175)
chr3 (22-218)||(19919437-19919633)
chr3 (31-185)||(43120915-43121069)
chr3 (78-185)||(23819357-23819464)
chr3 (73-203)||(8130760-8130890)
chr3 (67-137)||(52907331-52907401)
chr3 (72-173)||(16672274-16672375)
chr3 (78-191)||(24925920-24926033)
chr3 (78-170)||(46907926-46908018)
chr3 (94-182)||(52250369-52250457)
chr3 (67-169)||(50545024-50545126)
chr3 (31-133)||(36731638-36731740)
chr3 (78-137)||(16179732-16179791)
chr3 (2-137)||(18381766-18381899)
chr3 (78-140)||(14863742-14863804)
chr3 (78-140)||(21739774-21739836)
chr3 (69-155)||(30166594-30166680)
chr3 (91-185)||(44888709-44888803)
chr3 (1-58)||(14309287-14309344)
chr3 (78-135)||(15481049-15481106)
chr3 (78-135)||(17077588-17077645)
chr3 (78-191)||(42674673-42674786)
chr3 (94-182)||(7164296-7164384)
chr3 (90-225)||(12341456-12341591)
chr3 (72-158)||(6825598-6825684)
chr3 (97-167)||(8948278-8948348)
chr3 (79-140)||(10868437-10868498)
chr3 (78-139)||(36709701-36709762)
chr3 (72-137)||(48930512-48930577)
chr3 (78-166)||(19891469-19891557)
chr3 (90-154)||(47538071-47538135)
chr3 (69-167)||(17914449-17914547)
chr3 (97-137)||(20797918-20797958)
chr3 (67-135)||(22734014-22734082)
[»] chr5 (41 HSPs)
chr5 (9-239)||(380624-380854)
chr5 (67-197)||(22094478-22094608)
chr5 (1-197)||(42259995-42260193)
chr5 (66-218)||(42514500-42514652)
chr5 (28-216)||(28534886-28535074)
chr5 (71-182)||(21084666-21084777)
chr5 (66-218)||(23239163-23239315)
chr5 (22-218)||(30731522-30731718)
chr5 (67-218)||(30509231-30509382)
chr5 (67-218)||(30549574-30549725)
chr5 (73-203)||(36256562-36256692)
chr5 (78-191)||(588299-588412)
chr5 (31-169)||(20207977-20208115)
chr5 (78-191)||(35121923-35122036)
chr5 (40-181)||(35983036-35983177)
chr5 (94-169)||(6050048-6050123)
chr5 (66-137)||(8299471-8299542)
chr5 (90-225)||(25856640-25856775)
chr5 (78-137)||(27796276-27796335)
chr5 (78-217)||(33170450-33170589)
chr5 (72-167)||(41590875-41590970)
chr5 (72-182)||(4297553-4297663)
chr5 (1-136)||(26261608-26261742)
chr5 (96-191)||(10486137-10486232)
chr5 (69-148)||(15861963-15862042)
chr5 (90-176)||(19838368-19838455)
chr5 (1-164)||(22174258-22174419)
chr5 (78-140)||(19506790-19506852)
chr5 (90-148)||(29572148-29572206)
chr5 (90-148)||(29573525-29573583)
chr5 (90-148)||(29574902-29574960)
chr5 (90-148)||(29576279-29576337)
chr5 (90-148)||(29577656-29577714)
chr5 (90-148)||(29579033-29579091)
chr5 (3-185)||(3580834-3581016)
chr5 (90-135)||(10781005-10781050)
chr5 (66-135)||(22437998-22438067)
chr5 (100-225)||(33385174-33385299)
chr5 (78-139)||(38358259-38358320)
chr5 (90-132)||(6885717-6885759)
chr5 (78-218)||(31865089-31865229)
[»] chr7 (42 HSPs)
chr7 (1-209)||(27218339-27218547)
chr7 (2-233)||(33820752-33820983)
chr7 (67-225)||(45993357-45993515)
chr7 (28-216)||(17721377-17721565)
chr7 (66-218)||(4937336-4937488)
chr7 (91-218)||(13440863-13440990)
chr7 (1-183)||(19544647-19544827)
chr7 (9-123)||(34104200-34104314)
chr7 (66-182)||(41805003-41805119)
chr7 (66-137)||(11276537-11276608)
chr7 (66-137)||(29968754-29968825)
chr7 (66-172)||(25018556-25018662)
chr7 (73-203)||(45164770-45164900)
chr7 (67-135)||(41340330-41340398)
chr7 (78-140)||(19735310-19735372)
chr7 (78-155)||(28173254-28173331)
chr7 (90-158)||(34232505-34232573)
chr7 (67-155)||(46626603-46626691)
chr7 (78-137)||(23054259-23054318)
chr7 (142-233)||(23887829-23887920)
chr7 (78-137)||(36227440-36227499)
chr7 (91-185)||(17056334-17056428)
chr7 (90-139)||(4078081-4078130)
chr7 (22-176)||(4164775-4164929)
chr7 (22-176)||(34207066-34207220)
chr7 (97-137)||(34791964-34792004)
chr7 (142-233)||(23899005-23899096)
chr7 (78-125)||(31423386-31423433)
chr7 (66-137)||(45871543-45871614)
chr7 (90-135)||(2820012-2820057)
chr7 (73-166)||(6335652-6335745)
chr7 (67-136)||(18671952-18672021)
chr7 (78-139)||(18768200-18768261)
chr7 (96-185)||(22818958-22819047)
chr7 (90-135)||(29917024-29917069)
chr7 (1-58)||(39658755-39658812)
chr7 (90-135)||(39930887-39930932)
chr7 (68-139)||(28740222-28740293)
chr7 (66-131)||(4344630-4344695)
chr7 (73-158)||(45460099-45460184)
chr7 (69-125)||(18317138-18317194)
chr7 (73-137)||(37942143-37942207)
[»] chr8 (40 HSPs)
chr8 (24-239)||(25193826-25194041)
chr8 (9-167)||(15539780-15539938)
chr8 (1-207)||(6245799-6246005)
chr8 (13-206)||(29721131-29721324)
chr8 (1-125)||(36025236-36025360)
chr8 (28-216)||(9923343-9923531)
chr8 (14-170)||(12341295-12341451)
chr8 (91-197)||(16375332-16375438)
chr8 (3-185)||(4987306-4987488)
chr8 (67-153)||(36157935-36158021)
chr8 (66-218)||(7925166-7925318)
chr8 (4-116)||(37165431-37165543)
chr8 (72-182)||(36493167-36493277)
chr8 (66-163)||(4991959-4992056)
chr8 (66-170)||(12332628-12332732)
chr8 (66-203)||(8300583-8300720)
chr8 (78-191)||(23942879-23942992)
chr8 (28-218)||(26774455-26774645)
chr8 (90-158)||(17659645-17659713)
chr8 (78-137)||(13878776-13878835)
chr8 (67-218)||(32267335-32267486)
chr8 (67-169)||(7453133-7453235)
chr8 (78-140)||(24794512-24794574)
chr8 (78-135)||(6901729-6901786)
chr8 (3-185)||(41691001-41691183)
chr8 (90-182)||(17700284-17700376)
chr8 (66-225)||(20825079-20825239)
chr8 (66-218)||(41664576-41664728)
chr8 (90-169)||(45255097-45255176)
chr8 (78-140)||(11393617-11393679)
chr8 (78-135)||(43612476-43612533)
chr8 (90-136)||(18187949-18187995)
chr8 (66-140)||(43775057-43775131)
chr8 (90-135)||(28992510-28992555)
chr8 (69-125)||(8445596-8445652)
chr8 (91-139)||(28453757-28453805)
chr8 (90-136)||(10530464-10530510)
chr8 (78-140)||(43249090-43249152)
chr8 (78-135)||(12135015-12135072)
chr8 (67-135)||(5585470-5585538)
[»] chr4 (45 HSPs)
chr4 (4-174)||(43516000-43516170)
chr4 (9-221)||(2072263-2072475)
chr4 (1-218)||(9691138-9691355)
chr4 (66-185)||(29553042-29553161)
chr4 (91-218)||(55299426-55299553)
chr4 (91-218)||(23872685-23872812)
chr4 (67-197)||(8935855-8935985)
chr4 (67-197)||(19115217-19115347)
chr4 (66-218)||(23641799-23641951)
chr4 (91-197)||(20675840-20675946)
chr4 (3-197)||(19648412-19648606)
chr4 (66-218)||(1827748-1827900)
chr4 (66-218)||(23647457-23647609)
chr4 (78-185)||(34976733-34976840)
chr4 (72-199)||(38296491-38296618)
chr4 (66-218)||(47419584-47419736)
chr4 (78-185)||(19733229-19733336)
chr4 (105-242)||(15342639-15342776)
chr4 (78-191)||(26694720-26694833)
chr4 (66-218)||(19756047-19756199)
chr4 (66-218)||(19783607-19783759)
chr4 (90-158)||(42779054-42779122)
chr4 (90-169)||(10562581-10562660)
chr4 (73-176)||(19308837-19308940)
chr4 (78-137)||(48312886-48312945)
chr4 (78-137)||(54482449-54482508)
chr4 (78-140)||(42952817-42952879)
chr4 (107-216)||(55464091-55464200)
chr4 (90-218)||(2365810-2365937)
chr4 (66-125)||(15741000-15741059)
chr4 (73-203)||(40688867-40688998)
chr4 (97-191)||(3129211-3129305)
chr4 (69-155)||(7662579-7662665)
chr4 (73-203)||(19162392-19162522)
chr4 (90-136)||(20396386-20396432)
chr4 (73-158)||(19837922-19838007)
chr4 (106-167)||(29133683-29133744)
chr4 (66-166)||(29328041-29328141)
chr4 (78-137)||(55724996-55725055)
chr4 (30-185)||(7447505-7447660)
chr4 (71-126)||(17826062-17826117)
chr4 (97-139)||(20509258-20509300)
chr4 (66-140)||(45636290-45636364)
chr4 (73-178)||(14538269-14538374)
chr4 (90-158)||(53486197-53486265)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-105)||(33930-34034)
[»] chr2 (32 HSPs)
chr2 (1-227)||(33583627-33583852)
chr2 (1-205)||(11197066-11197271)
chr2 (91-197)||(13551387-13551493)
chr2 (26-221)||(6824151-6824344)
chr2 (68-214)||(15018459-15018605)
chr2 (66-172)||(26146995-26147101)
chr2 (90-197)||(25380622-25380730)
chr2 (66-185)||(34357588-34357707)
chr2 (73-203)||(13416473-13416603)
chr2 (78-191)||(35488630-35488743)
chr2 (73-203)||(2207045-2207175)
chr2 (66-172)||(43311039-43311145)
chr2 (79-188)||(22724677-22724786)
chr2 (78-218)||(28399758-28399898)
chr2 (78-137)||(12646342-12646401)
chr2 (90-225)||(33515394-33515529)
chr2 (73-139)||(3153106-3153172)
chr2 (109-191)||(4222175-4222257)
chr2 (78-136)||(8065551-8065609)
chr2 (69-155)||(45422303-45422389)
chr2 (94-167)||(10689346-10689419)
chr2 (97-185)||(20946830-20946918)
chr2 (78-197)||(28253521-28253640)
chr2 (72-131)||(43722321-43722380)
chr2 (73-203)||(6724855-6724985)
chr2 (78-140)||(11233775-11233837)
chr2 (73-203)||(44028436-44028566)
chr2 (109-169)||(2282605-2282665)
chr2 (97-185)||(10289307-10289395)
chr2 (90-137)||(14440548-14440595)
chr2 (66-176)||(12605693-12605803)
chr2 (91-137)||(18669506-18669552)
[»] scaffold0048 (1 HSPs)
scaffold0048 (24-205)||(63521-63701)
[»] scaffold0189 (1 HSPs)
scaffold0189 (68-217)||(6873-7022)
[»] scaffold0034 (1 HSPs)
scaffold0034 (66-218)||(105051-105203)
[»] scaffold0016 (1 HSPs)
scaffold0016 (66-172)||(28554-28660)
[»] scaffold0026 (1 HSPs)
scaffold0026 (78-225)||(67872-68019)
[»] scaffold0179 (2 HSPs)
scaffold0179 (92-169)||(8338-8415)
scaffold0179 (92-169)||(13272-13349)
[»] scaffold0472 (1 HSPs)
scaffold0472 (66-137)||(4032-4103)
[»] scaffold0131 (1 HSPs)
scaffold0131 (96-155)||(3819-3878)
[»] scaffold0418 (1 HSPs)
scaffold0418 (69-155)||(8387-8473)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-148)||(182919-182977)
[»] scaffold0061 (1 HSPs)
scaffold0061 (71-172)||(55450-55551)
[»] scaffold0017 (1 HSPs)
scaffold0017 (71-172)||(143082-143183)
[»] scaffold1350 (1 HSPs)
scaffold1350 (90-218)||(348-476)
[»] scaffold0112 (1 HSPs)
scaffold0112 (78-137)||(14950-15009)
[»] scaffold0094 (1 HSPs)
scaffold0094 (91-139)||(26105-26153)
[»] scaffold1809 (1 HSPs)
scaffold1809 (90-133)||(1093-1136)
[»] scaffold0029 (1 HSPs)
scaffold0029 (96-191)||(134080-134175)
[»] scaffold0002 (1 HSPs)
scaffold0002 (96-191)||(311908-312003)


Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3544526 - 3544285
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  3544526 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaatgacagagattatac 3544427  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  3544426 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaagagagagagcgactttg 3544327  T
Q  201 ccaccccgataatctagactttatagtcttcaacacaggttc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3544326 ccaccccgataatctagactttatagtcttcaacacaggttc 3544285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1248011 - 1247770
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||| ||||||||| ||| ||||||||| |||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||    
T  1248011 aaacaaacagagctccaagcgatccatgaaattttcttgttatcctcacgccctccccaaatttttttattaaaaatagattcaatgacagagattatac 1247912  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    | |||| ||||||||| |||||||| ||||||||| | || ||||||| ||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  1247911 ccgacgaagctttgaaaaaggaaagagcatagacatgtaacgaggtcaggacagacttgagaagaaccaaccgggctccaaaagagagaaagcgactttg 1247812  T
Q  201 ccaccccgataatctagactttatagtcttcaacacaggttc 242  Q
    ||||||||||| ||||||||| || || ||||||||||||||    
T  1247811 ccaccccgatagtctagacttaatggttttcaacacaggttc 1247770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 20987878 - 20988093
Alignment:
Q  9 agagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacgga 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||| |||| |||||||    
T  20987878 agagctccaagcaacccaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaatgatagagatgatacatgacgga 20987977  T
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccg 208  Q
    ||||||||||||||||| ||||||||||| |  ||||||| |||| |||||||||||||||||||| |||| || |||||||| | ||||| ||||||||    
T  20987978 gctttgaagaaggaaagagcatagacaggtagcgaggtcaggacacacttgagaagaaccaaccga-ccccgaaggagagaaaacaacttttccaccccg 20988076  T
Q  209 ataatctagactttata 225  Q
    | |||||||||||||||    
T  20988077 acaatctagactttata 20988093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 13867262 - 13867024
Alignment:
Q  4 caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctg 103  Q
    ||||| ||| || |||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  13867262 caaaccgagctctaagcaacccaggaaattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaatagattcaatgacagagattatacctg 13867163  T
Q  104 acggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgcca 203  Q
    ||||||| |||||||||||||| ||||| ||||| ||||  |||| ||||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||    
T  13867162 acggagccttgaagaaggaaagagcatatacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagagagaaaacgactttgtca 13867063  T
Q  204 ccccgataatctagactttatagtcttcaacacaggttc 242  Q
    |||| | | |||||| || || || ||||||||||||||    
T  13867062 ccccaacagtctagatttaattgttttcaacacaggttc 13867024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5809296 - 5809537
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||||| || ||||||  | ||||||||||||||| ||||||||| |||||||||       ||||||||||||||||| ||||||| |||||||||    
T  5809296 aaacaaacaaagctccaagaaaaccaggaaattttcctattatcctcattccctccccaattttttttattaaaaatagatttaatgacaaagattatac 5809395  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    ||||||||||||||||||||||||| ||||||||||| || | ||||| ||||||||| ||||| |||||| |||||||| |||||| ||| | ||||||    
T  5809396 ctgacggagctttgaagaaggaaagagcatagacaggtaacgcggtcaggacagacttaagaaggaccaactgacccccataagagaaaaaacaactttg 5809495  T
Q  201 ccaccccgataatctagactttatagtcttcaacacaggttc 242  Q
    |||||| || |||||||  || || | ||| |||||||||||    
T  5809496 ccaccctgacaatctagttttaatggcctttaacacaggttc 5809537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 28358604 - 28358832
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttatta--aaaatagattcaatgacagagattat 98  Q
    ||||| |||||| ||||||| | |||| ||||||| ||||||||||||||||||||||       ||| ||   |||||||||||||||| |||||||||    
T  28358604 aaacacacagagctccaagcaatccagaaaatttttctgttatcctcactccctccccaatattttttttttttaaaatagattcaatgagagagattat 28358703  T
Q  99 acctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactt 198  Q
    ||||||||||||||||||||||||||| ||||||||| | |  || || | |||| |||| ||||||| ||| |||||||| || || ||||| ||||||    
T  28358704 acctgacggagctttgaagaaggaaagagcatagacatgaagcgatgttaggacaaacttaagaagaatcaagcgacccccgaaggatagaaaacgactt 28358803  T
Q  199 tgccaccccgataatctagactttatagt 227  Q
    |||||||||||||||||||| || |||||    
T  28358804 tgccaccccgataatctagatttaatagt 28358832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 19014408 - 19014202
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||| |||| ||||||| | |||| |||||||| |||||||||||||||||||||       ||  ||||||||||||||||||  ||||||||||     
T  19014408 aaacaaatagagctccaagcaatccagtaaattttcatgttatcctcactccctccccaaaaaaattgtttaaaaatagattcaatggaagagattatat 19014309  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    ||||| ||||||||||||||||||| ||||||||| | |   ||||||||||| |||||||||  |||||||| ||||||||||| |||||| |||| ||    
T  19014308 ctgacagagctttgaagaaggaaagagcatagacaagaagccaggtcaagacaaacttgagaaagaccaaccggcccccaaaagatagaaagtgactatg 19014209  T
Q  201 ccacccc 207  Q
    |||||||    
T  19014208 ccacccc 19014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 5497891 - 5498018
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||| |||||| |||||||||||||| ||||| |||||||| ||||    
T  5497891 gagattatacctgatggagctttgaagaaggaaattgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 5497990  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  5497991 accgactattccaacccgacagtctaga 5498018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 32352647 - 32352520
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  32352647 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 32352548  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  32352547 accgactattccaacccgacagtctaga 32352520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 48072761 - 48072634
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  48072761 gagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 48072662  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  48072661 accgactattccaacccgacagtctaga 48072634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 25504351 - 25504221
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | |||||||| |  |||||||||||||||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| ||||||||||    
T  25504351 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggaagagaggtcaacacagatttgagaagaa 25504252  T
Q  167 ccaaccgacccccaaaagagagaaagcgact 197  Q
    |||| || || ||||||||||| || |||||    
T  25504251 ccaaacggccaccaaaagagaggaaacgact 25504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 6051383 - 6051535
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  6051383 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 6051482  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  6051483 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 6051535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 40562981 - 40562818
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    ||||| |||| ||||||| |  |||||||||||||||||| |||||| |||| |||       ||| ||||||||||||||||||| ||| || ||||||    
T  40562981 acaaatagagctccaagcaattcaggaaattttcctgttaacctcacaccctgcccaaaaaattttgttaaaaatagattcaatgagagaaatgatacct 40562882  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    ||| |||||||||| || ||||| ||||||||||| |  ||||||| |||| |||| |||||||    
T  40562881 gacagagctttgaaaaaagaaagcgcatagacaggaaccgaggtcaggacaaactttagaagaa 40562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 45271027 - 45271137
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 171  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| || |||||||||    
T  45271027 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggaagagaggtcaagacagacttaaggagaaccaac 45271126  T
Q  172 cgacccccaaa 182  Q
    || || |||||    
T  45271127 cggccaccaaa 45271137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 48434867 - 48435049
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    ||||| |||||||||| | ||||| | |||||||||| ||||||||||||| ||||        ||| ||| |||||||||||||  |||||||||||||    
T  48434867 acaaatagagttccaatcaacccacgcaattttcctggtatcctcactcccaccccaaaaaaaattaataagaatagattcaatggaagagattatacct 48434966  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |  ||||||||||| |||||||| || |||||||||||||| | || |||||| || | ||||| ||| || |||||| ||||    
T  48434967 gcgggagctttgaaaaaggaaagagcgtagacaggcaatgaagacaggacagattttaaaagaatcaagcggcccccataaga 48435049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 7396056 - 7395949
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||| ||| ||||||||||||||||| |  | |||||| || || ||||| ||||||    
T  7396056 agagattatacctgatggagctttgaagaaggaaagatcatagacagacaaagaggtcaagacagactttaacaaaaccaaacggccgccaaaggagaga 7395957  T
Q  190 aagcgact 197  Q
    || |||||    
T  7395956 aaacgact 7395949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 35541814 - 35541951
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  |||| ||| ||||| ||||||    
T  35541814 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 35541913  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgcca 203  Q
    | ||| || || || || || ||||| |||||||||||    
T  35541914 atcaaacggccacctaaggaaagaaaccgactttgcca 35541951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45795990 - 45796083
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagaga 94  Q
    |||||||||||| ||||||| |||||  ||| |||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  45795990 aaacaaacagagctccaagcaacccaaaaaaatttcctgttatcctcactccctccctaaaaaaatttattaaaaatagattcaatgacagaga 45796083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 26721437 - 26721516
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||| |||| |||| | ||||||||    
T  26721437 agagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacaaactttaaaagaacca 26721516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 33260036 - 33259943
Alignment:
Q  92 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||| |  ||| ||||||||||||| |||||||| |  ||||| ||||||||    
T  33260036 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaaga 33259943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 33280195 - 33280102
Alignment:
Q  92 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||| |  ||| ||||||||||||| |||||||| |  ||||| ||||||||    
T  33280195 agatgatacctgagggagctttgaagaaggaaagagcatagacagggagagagatcaagacagacttaagaagaacaagacgaccaccaaaaga 33280102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 17708862 - 17708930
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||  ||||||||    
T  17708862 agagattatacctgatggagctttgaagaaggaaagtgcatagacaggcagagaggtcagaacagactt 17708930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 47622425 - 47622285
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  |||||||||| |||||||||||||||| |||||||| ||||||||||| |  |  |||| ||||||||| ||||| |  |  |||||     
T  47622425 agattcaatggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacagactttagaaggattaggcgacca 47622326  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    |||||||||||||| |||||  |||| || || ||||||||    
T  47622325 ccaaaagagagaaaccgactacgccaaccagacaatctaga 47622285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 32642589 - 32642728
Alignment:
Q  4 caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctg 103  Q
    ||||| || |||||| | ||||| | ||||||||| |||||||||| ||||||||        ||| ||||||||||||| |||  ||||||||||||||    
T  32642589 caaacggaattccaatcaacccaagcaattttcctattatcctcaccccctccccaaaaaaaattaataaaaatagattcgatggaagagattatacctg 32642688  T
Q  104 acggagctttgaagaaggaaagggcatagacaggcaatga 143  Q
      |||||| |||| ||||| ||||| ||||||||||||||    
T  32642689 cgggagctctgaaaaaggatagggcgtagacaggcaatga 32642728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38070546 - 38070661
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||| | ||||||||| ||| ||||||||||||||||||||||||||||||        ||| || ||| |||| | ||||  ||||||||||     
T  38070546 aaacaaacagtgctccaagcgatccatgaaattttcctgttatcctcactccctccctaattttgttttttcaaagtagagttaatggaagagattatat 38070645  T
Q  101 ctgacggagctttgaa 116  Q
    ||||||||||||||||    
T  38070646 ctgacggagctttgaa 38070661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 20796452 - 20796511
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  20796452 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 20796511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 19042904 - 19042974
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||||||| | ||||||||| | ||||||||||||||| ||||||  |||||||||||||||||| |||||    
T  19042904 ttattaaacaaagattcaataaaagagattatacctgatggagctcagaagaaggaaagggcataaacagg 19042974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 39431078 - 39431140
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| || |||||||| ||||||||||||||    
T  39431078 agattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacaggcaa 39431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 49264313 - 49264251
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  49264313 agattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacaggcaa 49264251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 3074548 - 3074593
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  3074548 agagattatacctgatggagctctgaagaaggaaagggcatagaca 3074593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 5283212 - 5283140
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaa 163  Q
    ||||| |||||||| ||||||||||||||||||||  |||||||  | |||||| ||||||||||||| ||||    
T  5283212 gagatgatacctgaaggagctttgaagaaggaaagatcatagactagtaatgagatcaagacagactttagaa 5283140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 42475256 - 42475184
Alignment:
Q  68 tattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    |||||||||||||||||||    || |  |||||||||||||| |||||||||||||||||||| ||||||||    
T  42475256 tattaaaaatagattcaatagaggatacgatacctgacggagccttgaagaaggaaagggcataaacaggcaa 42475184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 10710539 - 10710482
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||| ||| |||||||    
T  10710539 agagattatacctgatggagctttgaagaagg-aagcgcatagacagacaaagaggtca 10710482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 22191117 - 22191023
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||||||||||| || ||| ||||||||||||  ||||||||||| |  || | |||||||||||| || |||||||  ||||| ||||||||    
T  22191117 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaagacaagacagacttaaggagaaccagacgaccaccaaaaga 22191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 51052695 - 51052813
Alignment:
Q  100 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgacttt 199  Q
    |||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||| ||||| || |||| ||| ||||| || ||||| || || |||||||    
T  51052695 cctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttt 51052794  T
Q  200 gccaccccgataatctaga 218  Q
    |||| || || ||||||||    
T  51052795 gccaaccagacaatctaga 51052813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 43943813 - 43943750
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagaca 153  Q
    ||||||||||| ||  |||||| ||||||||||||||||||| ||||||| ||| | |||||||    
T  43943813 agagattatacatgcgggagctctgaagaaggaaagggcatatacaggcagtgaagacaagaca 43943750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 2654889 - 2654963
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    |||||||||||||||||||||    || || |||||||||||||||||||| || |||||  |||| ||||||||    
T  2654889 tttattaaaaatagattcaatagaggaaatgatacctgacggagctttgaaaaaagaaagaacataaacaggcaa 2654963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 21409046 - 21409140
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||||||||||| || ||| ||||||||||||   |||||||||| |  |||| || ||||||||| || |||||||  ||||| ||||||||    
T  21409046 gagattatacctgatggtgctctgaagaaggaaaaaacatagacaggaagagaggacaggacagacttaaggagaaccagacgaccaccaaaaga 21409140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 16586552 - 16586500
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    |||||||||||||| | ||| ||||||||||  ||||||||||| ||||||||    
T  16586552 aaaatagattcaataaaagaaattatacctgcaggagctttgaaaaaggaaag 16586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 27889548 - 27889608
Alignment:
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    |||||||||||||||| |||||| ||||| |  ||||||| ||||||||| || |||||||    
T  27889548 gctttgaagaaggaaatggcatacacaggaagcgaggtcaggacagacttaaggagaacca 27889608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 30650348 - 30650308
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  30650348 atacctaagggagctttgaagaaggaaagcgcatagacagg 30650308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 14843562 - 14843321
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  14843562 aaacaaacagagttccaagcgacccaggaaattttccttttatcctcactccctccccaaaaaaatttattaaaaatagattcaatgacagagattatac 14843463  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| ||||||    
T  14843462 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagtcttgagaagaatcaaccgacccccaaaagagagatagctactttg 14843363  T
Q  201 ccaccccgataatctagactttatagtcttcaacacaggttc 242  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  14843362 ccaccccgataatctagactttatattcttcaacacaggttc 14843321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25350937 - 25351176
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttt-attaaaaatagattcaatgacagagattata 99  Q
    |||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||    
T  25350937 aaacaaactgagctccaagcaatccaggaaattttcctgttatcctcactccctccccaaattttttttattaaaaatagattcaatgatagagattata 25351036  T
Q  100 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgacttt 199  Q
    |||||||||||||||||||||||||| ||||||||||| |  |||||||||||| |||| | ||| ||||||||||| ||| | || ||||||||||| |    
T  25351037 cctgacggagctttgaagaaggaaagagcatagacaggaagcgaggtcaagacaaactttaaaaggaccaaccgaccaccataggatagaaagcgactct 25351136  T
Q  200 gccaccccgataatctagactttatagtcttcaacacagg 239  Q
    |||||||||| ||||| ||||| || || | |||||||||    
T  25351137 gccaccccgacaatctggacttaattgtatgcaacacagg 25351176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14686433 - 14686195
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||||||        |||||||| ||||||||||||| |||||||||||    
T  14686433 aaacaaatagagtgccaagcaatccaggagattttcctgttatcctcactccctccccaaaaaaaattattaaacatagattcaatgatagagattatac 14686334  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||| |||||||||||||| ||||||||||| |||| || || |||||| || ||||| ||||||||||| ||| |||| || || ||||||||    
T  14686333 ctgacggagccttgaagaaggaaagagcatagacaggtaatgcggacaggacagaattcagaaggaccaaccgacctccataagaaaggaaacgactttg 14686234  T
Q  201 ccaccccgataatctagactttatagtcttcaacacagg 239  Q
    ||||||| | | |||||| || || || |||||||||||    
T  14686233 ccaccccaacagtctagatttaattgttttcaacacagg 14686195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26514439 - 26514664
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnnttta-ttaaaaatagattcaatgacagagattata 99  Q
    ||||| || ||| ||||||| | ||||||||||||||| |||||||||||||||||||       |||  ||||||||||||||||||| ||||| ||||    
T  26514439 aaacatactgagctccaagcaatccaggaaattttcctattatcctcactccctccccaaaaaaattttgttaaaaatagattcaatgatagagagtata 26514538  T
Q  100 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgacttt 199  Q
    |||||| ||||||||||||| ||||| ||||||||||| |  ||||||||||| ||||| | ||| ||||| ||||| |||||||| ||||||||||| |    
T  26514539 cctgacagagctttgaagaaagaaagagcatagacaggaagcgaggtcaagaccgacttcaaaaggaccaaacgaccaccaaaagatagaaagcgactat 26514638  T
Q  200 gccaccccgataatctagactttata 225  Q
    |||||||||| |||| ||||||||||    
T  26514639 gccaccccgacaatcgagactttata 26514664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 19350659 - 19350867
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||| || |||||| ||||||||||||||| ||||||||||| |||||||       ||||||||| | ||||||||||| ||| |||||||    
T  19350659 aaacaaacagagctctaagcgatccaggaaattttcctattatcctcactacctccccaaaaaaatttattaaacaaagattcaatgagagaaattatac 19350758  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||||||||||||||||||  |||||||||| |  ||  |||  |||||||| ||||||||||| |||||||| ||||| ||||| ||||||||    
T  19350759 ctgacggagctttgaagaaggaaagtacatagacaggaagcgaactcagtacagacttaagaagaaccaaacgacccccgaaagatagaaaacgactttg 19350858  T
Q  201 ccaccccga 209  Q
    |||||||||    
T  19350859 ccaccccga 19350867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 26206138 - 26206265
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||| ||||| |||||||| ||||    
T  26206138 gagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 26206237  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  26206238 accgactattccaacccgacagtctaga 26206265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 33640634 - 33640856
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    |||||||||||||||| | | ||| || |||||||| | |||||||||||| ||||        |||||||| | |||||||| |  ||| ||||||||     
T  33640634 acaaacagagttccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattataccc 33640733  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgcc 202  Q
    ||| ||||||||||||| ||||| |||||||||||||  |||||||| ||||| |||||||||||||| || || ||||||||||| || ||||| | ||    
T  33640734 gacagagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaaccaaacggccaccaaaagagaggaaacgactattcc 33640833  T
Q  203 accccgataatctagactttata 225  Q
    | || || | |||||||||||||    
T  33640834 aacctgacagtctagactttata 33640856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 32186398 - 32186601
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||           || ||||| | || |||||||  ||||||||||     
T  32186398 aaacaaatagagctccaagcaatccaggaaattttcctgttatcctcactccctctttaaaaaaaattcttaaataaagtttcaatggaagagattatat 32186497  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    ||| ||||||||||||||| ||||| |  |||||||| |  ||||||| ||||||||| ||||||| ||| || ||||||||||| ||||||||||| ||    
T  32186498 ctgtcggagctttgaagaaagaaagagtgtagacaggaagcgaggtcaggacagacttaagaagaatcaagcggcccccaaaagatagaaagcgactctg 32186597  T
Q  201 ccac 204  Q
    ||||    
T  32186598 ccac 32186601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 15674637 - 15674737
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||||| ||||| |||||| | ||||| |||||||||||||    
T  15674637 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaacccagcgaccaccaaaagagagaa 15674736  T
Q  191 a 191  Q
    |    
T  15674737 a 15674737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 10362927 - 10363059
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||||||||| ||||||  ||| ||||||  ||||||| | |||||||||||||| ||||||||||| |  ||||||||||||||||||||||||    
T  10362927 tttattaaaaatagaatcaatggaagaaattatat-tgacggaaccttgaagaaggaaagagcatagacaggtagagaggtcaagacagacttgagaaga 10363025  T
Q  166 accaaccgacccccaaaagagagaaagcgacttt 199  Q
    || || ||||| ||||| || ||||| |||||||    
T  10363026 actaaacgaccaccaaacgacagaaaccgacttt 10363059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 502955 - 502788
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    |||||||||| ||||| | | ||| || |||||||| | |||||||||||| ||||        |||||||| | |||||||| |  |||||||||||||    
T  502955 acaaacagagctccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagagattatacct 502856  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 170  Q
    ||||||||||||||||| ||||| |||||||||||||  |||||||   |||| ||||||||||||||    
T  502855 gacggagctttgaagaaagaaagagcatagacaggcatagaggtcagcgcagatttgagaagaaccaa 502788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 21629458 - 21629323
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  ||||||||||| |||||||| | ||| ||||| ||||| || ||     
T  21629458 agagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaagg 21629359  T
Q  190 aagcgactttgccaccccgataatctagactttata 225  Q
     | | ||| ||||| || || |||||||||||||||    
T  21629358 tacctactatgccaaccagacaatctagactttata 21629323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 13563285 - 13563165
Alignment:
Q  70 ttaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||| ||||||||  | ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||| | |||| | |||| || |||||    
T  13563285 ttaaaaata-attcaatggaaaagattatacctgacggagctttgaaaaaggaaagagcatagacaggcagagaggttaggacaaatttgataaaaacca 13563187  T
Q  170 accgacccccaaaagagagaaa 191  Q
    |||| ||  | |||||||||||    
T  13563186 accggccttcgaaagagagaaa 13563165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 649409 - 649341
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||  |||||||  ||||||||    
T  649409 agagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcagaacagactt 649341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 11060198 - 11060130
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||  |||||| |||||||||    
T  11060198 agagattatacctgatggaactttgaagaaggaaagcgcatagacaggcaaaaaggtcaggacagactt 11060130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 13938510 - 13938634
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||| ||| | ||  |||| |||||| |||||||| | ||| || ||     
T  13938510 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagataggaagtgcagtcaggacagatttgagaaggatcaatcggcca 13938609  T
Q  178 ccaaaagagagaaagcgactttgcc 202  Q
    |||||||| || || ||||| ||||    
T  13938610 ccaaaagaaaggaaccgactatgcc 13938634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29976433 - 29976377
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccc 57  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  29976433 aaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctccc 29976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 2554385 - 2554456
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| | ||||||||||  |||||||||||| |||||||||||||| |||||||| |||||||||||    
T  2554385 tttattaaacaaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagtgcatagacagg 2554456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 17577077 - 17576918
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | |||||||||   ||||||||||||||||||||||||||| |||||||| | ||||||||| |  |  ||||||||||| ||||| |||    
T  17577077 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgaatagacaggaagcgcagtcaagacagatttgagcaga 17576978  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactttata 225  Q
    | ||| ||||  ||||| || ||  | | ||| ||||| || || |||||||||||||||    
T  17576977 atcaagcgactaccaaaggaaaggtacctactatgccaaccagacaatctagactttata 17576918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 13086335 - 13086397
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||| ||||||||    
T  13086335 agattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacaggcaa 13086397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 17605670 - 17605578
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaa 182  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||||| |  |  ||||||||||| |||||||| | ||| ||||| |||||    
T  17605670 agagattatacctgatggagctttgaaaaaggaaagcgcatagacaggaagcgcagtcaagacagatttgagaagtatcaaacgaccaccaaa 17605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 18681972 - 18681863
Alignment:
Q  28 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 127  Q
    |||||||| || |||||||||||||||||||       |||||| || | ||||||||||  |||||||||||| || ||||||||||| |||||||| |    
T  18681972 gaaatttttcttttatcctcactccctccccaaaaaaatttatttaacaaagattcaatgggagagattatacccgatggagctttgaaaaaggaaagag 18681873  T
Q  128 catagacagg 137  Q
    | ||||||||    
T  18681872 cgtagacagg 18681863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 24766812 - 24766703
Alignment:
Q  28 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 127  Q
    |||||||| || |||||||||| | ||||||       |||||| || | ||||| ||||  ||||||||||||||||||||||||||| |||||||| |    
T  24766812 gaaatttttcttttatcctcaccctctccccaaaaaaatttatttaacaaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtg 24766713  T
Q  128 catagacagg 137  Q
    ||||||||||    
T  24766712 catagacagg 24766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 2923634 - 2923735
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    ||||||||||||||||||| |||||||||||||||   ||||||||  ||| || | |||| ||||||| || |||||||  ||||| |||||||| |||    
T  2923634 agagattatacctgacggaactttgaagaaggaaaaaacatagacaaacaaggaagacaaggcagactttaggagaaccaggcgaccaccaaaagaaaga 2923733  T
Q  190 aa 191  Q
    ||    
T  2923734 aa 2923735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 21549639 - 21549752
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||| ||||||||| |||  || ||||  || || ||||| |||| ||| || ||     
T  21549639 agattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaagcagagatgtcagaactgatttgaggagaatcaagcggcca 21549738  T
Q  178 ccaaaagagagaaa 191  Q
    ||||||||||||||    
T  21549739 ccaaaagagagaaa 21549752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 19616232 - 19616120
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||||||||||  ||||||||||||||  |||||| | || || |||||||||||||||||||  |||| || |||||| || || || | ||| |    
T  19616232 aaaatagattcaatggaagagattatacctgcaggagctctaaaaaaagaaagggcatagacaggcagagaggacatgacagatttaaggaggatcaagc 19616133  T
Q  173 gacccccaaaaga 185  Q
    |||| ||||||||    
T  19616132 gaccaccaaaaga 19616120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 17078403 - 17078357
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  17078403 agagattatacctgatggagctttgaagaaggaaagcgcataaacag 17078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 17713020 - 17712882
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||||||||| | ||||| | ||||||||| |||||||||| ||| ||||        ||| ||| ||||||||| |||  ||||||||||     
T  17713020 aaacaaacagagttccaatcaacccaagcaattttcctattatcctcacccccaccccaaaaaaaattaataagaatagattcgatggaagagattataa 17712921  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||  |||||| |||| ||| | ||||| ||||||||||    
T  17712920 ctgtgggagctctgaaaaagaatagggcgtagacaggca 17712882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 33753522 - 33753458
Alignment:
Q  75 aatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    ||||||||| |||  ||||||||||||||  ||||||||||| ||||| ||||| ||||||||||    
T  33753522 aatagattcgatggaagagattatacctgcgggagctttgaaaaaggatagggcgtagacaggca 33753458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 1308020 - 1307917
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||||||||||  ||||||||||||||  |||||| |||| || |||||| | |||||||||| ||| | || ||| ||||| || |||| ||| |    
T  1308020 aaaatagattcaatggaagagattatacctgctggagctctgaaaaaagaaaggacgtagacaggcagtgaagacaggacggacttaaggagaatcaagc 1307921  T
Q  173 gacc 176  Q
    ||||    
T  1307920 gacc 1307917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 11469365 - 11469412
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    ||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  11469365 agattcaatggaagagattaaacctgatggagctttgaagaaggaaag 11469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 13563348 - 13563305
Alignment:
Q  14 tccaagcgacccaggaaattttcctgttatcctcactccctccc 57  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||    
T  13563348 tccaagcgatccaggaaattttcctgttattctcacttcctccc 13563305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 32198012 - 32198059
Alignment:
Q  96 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatga 143  Q
    ||||||||||||||||||||| || ||||| ||||| |||||||||||    
T  32198012 tatacctgacggagctttgaaaaaagaaagagcataaacaggcaatga 32198059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 1104283 - 1104237
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    ||||||| ||||| | |||||||||||||||||||| ||||||||||    
T  1104283 agagattgtacctaatggagctttgaagaaggaaagagcatagacag 1104237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 14372339 - 14372293
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaa 124  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||    
T  14372339 agattcaatggaagagattatacctggcggagctttgaaaaaggaaa 14372293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 24573864 - 24573934
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    |||||| | |||||||||||||||||||| || |||| ||| |  |||||||||||| |||| ||||||||    
T  24573864 atacctaagggagctttgaagaaggaaagagcctagatagggagagaggtcaagacatacttaagaagaac 24573934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 12673479 - 12673406
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||||| |||| |||||| |||  |||||||||||  || ||| | |||||||||||||| |||||||||||||    
T  12673479 tttattcaaaagagattctatggaagagattatactagatggatcgttgaagaaggaaagagcatagacaggca 12673406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 29824777 - 29824901
Alignment:
Q  99 acctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactt 198  Q
    |||||||||||||||||| |||||||| ||  ||||| |||  ||  |||  ||| ||||||||||||| || ||||| || |||||||| || | ||||    
T  29824777 acctgacggagctttgaaaaaggaaagagcgaagacatgcagagaaatcataacaaacttgagaagaactaaacgacctccgaaagagaggaaacaactt 29824876  T
Q  199 tgccaccccgataatctagacttta 223  Q
    | ||  ||||| |||||||| ||||    
T  29824877 ttccgacccgacaatctagatttta 29824901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 31675646 - 31675884
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  31675646 aaacaaacagagtttcaagcgacccaggagattttcctgttatcctcactccctcccaaaaaaaaaatattaaaaatagattcaatgacagagattatac 31675745  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31675746 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttg 31675845  T
Q  201 ccaccccgataatctagactttatagtcttcaacacagg 239  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  31675846 ccaccccgataatctagacttaatggtcttcaacacagg 31675884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 31920776 - 31920539
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  31920776 aaacaaacagagtttcaagcgacccaggagattttcctgttatcctcactccctccc-aaatttttttattaaaaatagattcaatgacagagattatac 31920678  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31920677 ttgacgaagctttgaagaaggaaagggcatagacaggcaatgaggtcaggacagacttgagtagaaccaaccgacccccaaaagagagaaagcgattttg 31920578  T
Q  201 ccaccccgataatctagactttatagtcttcaacacagg 239  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  31920577 ccaccccgataatctagacttaatggtcttcaacacagg 31920539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 40513146 - 40512943
Alignment:
Q  4 caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctg 103  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||       ||||||||||| ||||||||||| ||||||||||||||    
T  40513146 caaacagagctccaagctacccaggaaattttcctgttttcctcactccctccccaaaaaaatttattaaaaagagattcaatgatagagattatacctg 40513047  T
Q  104 acggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgcca 203  Q
    ||||||| |||||||||||||| ||||||||||| ||||  |||| ||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||    
T  40513046 acggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagacttaagaaggaccaaccgacctccaaaagagagaaaacgactttgcca 40512947  T
Q  204 cccc 207  Q
    ||||    
T  40512946 cccc 40512943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 19875958 - 19876174
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||       ||||||||| | ||||||||||| ||| |||||||    
T  19875958 aaacaaacagagctccaagcgatccaggaaattttcctgttatcctcactacctcgccaaaaaaatttattaaacaaagattcaatgagagaaattatac 19876057  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    ||||||||| ||||||||||||||| ||||||||||| |  || |||| ||||||||| ||||||||||| |||||||| ||||| ||||| | ||||||    
T  19876058 ctgacggagatttgaagaaggaaagtgcatagacaggaagcgaagtcaggacagacttaagaagaaccaagcgacccccgaaagatagaaaacaactttg 19876157  T
Q  201 ccaccccgataatctag 217  Q
    ||||||||| |||||||    
T  19876158 ccaccccgacaatctag 19876174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 34830108 - 34830325
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||        || ||||||||||||||||||| ||||||||||||    
T  34830108 aaacaaacagagctccaagcaatccaggaaattttcctgttatcctcactccctcccaaaaaaaatt-attaaaaatagattcaatggcagagattatac 34830206  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccga-cccccaaaagagagaaagcgacttt 199  Q
    ||||||||||   |||||||||||| ||||||||||| ||   ||||| ||||||||| ||||| ||||||||| |||||| |||||||||| |||||||    
T  34830207 ctgacggagccaggaagaaggaaagagcatagacaggtaacacggtcaggacagacttaagaaggaccaaccgaccccccataagagagaaaacgacttt 34830306  T
Q  200 gccaccccgataatctaga 218  Q
    |||||||||| ||||||||    
T  34830307 gccaccccgacaatctaga 34830325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 33 - 239
Target Start/End: Original strand, 53941993 - 53942199
Alignment:
Q  33 tttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatag 132  Q
    |||| |||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  53941993 tttcatgttatcctcactccctccccaaaattttttattaaaaatagattcaatgatagagattatacctgacggagctttgaagaaggaaagagcatag 53942092  T
Q  133 acaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactttatagtcttca 232  Q
    ||| | |  ||||||||||||||||| | ||| ||||||||||| ||| | || ||||||||||| ||||||||||| ||||| ||||| || || | ||    
T  53942093 acaagaagcgaggtcaagacagactttaaaaggaccaaccgaccaccataggatagaaagcgactctgccaccccgacaatctggacttaattgtatgca 53942192  T
Q  233 acacagg 239  Q
    |||||||    
T  53942193 acacagg 53942199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 55367336 - 55367562
Alignment:
Q  13 ttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctt 112  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||         | ||||| | |||||| |||  ||||||||||||||||| |||||    
T  55367336 ttccaagcgatccaggaaattttcctgttgtcctcactccctccccaaaaaaacattttaaacaaagattctatggaagagattatacctgacgcagctt 55367435  T
Q  113 tgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataa 212  Q
    |||| |||||||| || |||||| |||| |||| || |||||||||||  | |||||| || || || || |||||||| ||||| |||||||| || ||    
T  55367436 tgaaaaaggaaagagcgtagacaagcaaagaggacaggacagacttgatcaaaaccaatcggcctccgaatgagagaaaacgactctgccacccggacaa 55367535  T
Q  213 tctagactttatagtcttcaacacagg 239  Q
    |||||| || || || | |||||||||    
T  55367536 tctagatttaatggtatgcaacacagg 55367562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 2365058 - 2365210
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  2365058 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 2365157  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  2365158 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 2365210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 6175812 - 6175685
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||| ||||||||||||||| |||||||||||||  || ||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  6175812 gagattatacctgttggagttttgaagaaggaaagtgcatagacaggcagagatgtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 6175713  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  6175712 accgactattccaacccgacagtctaga 6175685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 14309368 - 14309511
Alignment:
Q  75 aatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccga 174  Q
    |||||||||||| | ||| || ||||||||||||||| ||||||||||||| ||||||||| | |  ||||||| |||||| ||||| ||||| || ||     
T  14309368 aatagattcaataagagaaatgatacctgacggagctatgaagaaggaaagagcatagacaagaagcgaggtcaggacagatttgaggagaactaatcgg 14309467  T
Q  175 cccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    ||||| ||||| | ||||||||||||||||||||  ||||||||    
T  14309468 cccccgaaagataaaaagcgactttgccaccccgccaatctaga 14309511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 217
Target Start/End: Complemental strand, 962511 - 962372
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| | ||  |||| |||||| |||||||| | |||||| ||     
T  962511 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagtgcagtcaggacagatttgagaaggatcaaccggcca 962412  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctag 217  Q
    |||||||| || || ||||| ||||| || || |||||||    
T  962411 ccaaaagaaaggaaccgactatgccaaccagacaatctag 962372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 48569371 - 48569224
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||||||| ||||||||||| | ||  |||| ||| || |||||||||| ||| |||||     
T  48569371 agattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgagaagaatcaaacgacca 48569272  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctagactttata 225  Q
    |||||||| || || ||||| ||||| || || |||||||| ||||||    
T  48569271 ccaaaagaaaggaaccgactatgccaaccagacaatctagattttata 48569224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 17271098 - 17270969
Alignment:
Q  70 ttaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||||||||  | |||||||||||||| || ||||||| ||| |||| || |||||| | |  ||||||| ||||||||| |||| || ||    
T  17271098 ttaaaaatagattcaatggaacagattatacctgacagaactttgaaaaagaaaagagcgtagacatgaagagaggtcaggacagacttcagaaaaatca 17270999  T
Q  170 accgacccccaaaagagagaaagcgacttt 199  Q
    | |||||||||||||||||||| |||||||    
T  17270998 aacgacccccaaaagagagaaaacgacttt 17270969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 34332175 - 34332023
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||||||||||||| || |||||||| ||||||||||| |  |  |||| ||||||||| || |||    
T  34332175 tttattaaacaaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcatagacaggtagagcagtcaggacagactttagtaga 34332076  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  34332075 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 34332023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 19919633 - 19919437
Alignment:
Q  22 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 121  Q
    ||||| || ||||| || || ||||||||||||||||       ||||||||| | ||||||||||  |||||||||||||| |||||||||||||||||    
T  19919633 acccaagatatttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaagg 19919534  T
Q  122 aaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    |||| ||||||||||| |  |  || | |||  |||| || |||| ||| ||||| || ||||| ||||| ||||||||||| || || ||||||||    
T  19919533 aaagtgcatagacaggtagagcagttaggacgaactttagtagaatcaaacgaccaccgaaagatagaaaccgactttgccaaccagacaatctaga 19919437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 43121069 - 43120915
Alignment:
Q  31 attttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcat 130  Q
    |||||||| | |||||||||||| ||||       ||||||||| | ||||||||||  ||||||||||||| | |||||||||||||||||||  ||||    
T  43121069 attttcctatgatcctcactcccaccccaaaaaaatttattaaacaaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcat 43120970  T
Q  131 agacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||| ||  ||||||| |||||| || | ||||||||  ||||| ||||||||    
T  43120969 agacagacagagaggtcaggacagattttaaaagaaccaggcgaccgccaaaaga 43120915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 23819357 - 23819464
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||| |||||||  ||||||| ||||||||| |  |||||||  |||||     
T  23819357 agattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacaggcagagaggtcaggacagactttaagagaaccatgcgacca 23819456  T
Q  178 ccaaaaga 185  Q
    ||||||||    
T  23819457 ccaaaaga 23819464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 8130760 - 8130890
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    ||||||||||| |||  ||||||| ||||||  ||||| |||||||||||||| |||||||| ||    | ||||||||||||||| ||||||| ||| |    
T  8130760 aaaatagattctatggaagagattctacctgctggagccttgaagaaggaaagagcatagaccggttgcgcggtcaagacagactttagaagaatcaagc 8130859  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| ||||| || ||||| |||||||||||    
T  8130860 gacctccaaatgaaagaaatcgactttgcca 8130890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 52907401 - 52907331
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||||||| |||||||||||   ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  52907401 ttattaaacatagattcaatagaagagattatacctgatggagctttgaagaaggaaagggcataaacagg 52907331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 16672375 - 16672274
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 171  Q
    ||||||||| |||| |  ||| ||||||||||||||||| ||||||||||||||  |||||||||| |  ||||||||||||||||| || ||||| |||    
T  16672375 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagaacatagacaggtagagaggtcaagacagactttaggagaactaac 16672276  T
Q  172 cg 173  Q
    ||    
T  16672275 cg 16672274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 24926033 - 24925920
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||| |||||||||||||| ||||| |||||||||||||  || ||||| || || || || || | ||| |||||     
T  24926033 agattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggcagagaagtcaaaaccgatttaaggaggatcaagcgaccg 24925934  T
Q  178 ccaaaagagagaaa 191  Q
    ||||||||||||||    
T  24925933 ccaaaagagagaaa 24925920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 46908018 - 46907926
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 170  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||||| |||||  |||||||  |||||||| | |||||||||    
T  46908018 agattcaatggaagagattatacttgatggagctttgaagaaggaaagagcatagataggcagagaggtcagaacagactttaaaagaaccaa 46907926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 52250457 - 52250369
Alignment:
Q  94 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaa 182  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||||||| |||| || ||||| ||||  ||||||||    
T  52250457 attatacctgacggagccttgaagaaggaaagcgcatagacaggtagagaggtcaagacaaactttaggagaactaacctgcccccaaa 52250369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 50545024 - 50545126
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | ||||||||||  ||||||||||||||| ||| |||||||||||||||  |||||||| || |  ||||||| ||||||||| | |||||    
T  50545024 ttattaaataaagattcaatggaagagattatacctgatggacctttgaagaaggaaaacgcatagacgggtagagaggtcaggacagactttaaaagaa 50545123  T
Q  167 cca 169  Q
    |||    
T  50545124 cca 50545126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 36731638 - 36731740
Alignment:
Q  31 attttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcat 130  Q
    |||||||| ||||||||||| || ||||       |||||| || | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||    
T  36731638 attttcctattatcctcacttcccccccccaaaaatttatttaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcat 36731737  T
Q  131 aga 133  Q
    |||    
T  36731738 aga 36731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 16179732 - 16179791
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||||    
T  16179732 agattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacagg 16179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 18381766 - 18381899
Alignment:
Q  2 aacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacc 101  Q
    |||||||| || ||||||||| ||||||||||||||| |||||||||||||| |||           | | |||||||||||||||  ||| ||||||||    
T  18381766 aacaaacatagctccaagcgatccaggaaattttcctattatcctcactcccacccaaaaaaaaa--aatcaaaatagattcaatggaagatattatacc 18381863  T
Q  102 tgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||| ||||||||||| |||||||  |||||||||||    
T  18381864 tgatggagctttgaaaaaggaaatagcatagacagg 18381899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 14863804 - 14863742
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||| | |||||||| ||||||||||| ||||||||||||||    
T  14863804 agattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacaggcaa 14863742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 21739836 - 21739774
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  |||||||||| |||| |||||||| ||||||||||| ||||||||||||||    
T  21739836 agattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacaggcaa 21739774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 30166680 - 30166594
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |  || |||||||||||    
T  30166680 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 30166594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 44888709 - 44888803
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||||||||||| || ||| ||||||||||||  ||||||||||| |  |||| |||||||||||| || |||||||  ||||| ||||||||    
T  44888709 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaaccagacgaccaccaaaaga 44888803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14309287 - 14309344
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc 58  Q
    ||||||| |||| ||||||| | | |||||||||||||||||||||||||||||||||    
T  14309287 aaacaaatagagctccaagcaatctaggaaattttcctgttatcctcactccctcccc 14309344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 15481106 - 15481049
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||  ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  15481106 agattcaatggaagagattatacctgatggagctttgaagaaagaaagagcatagaca 15481049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 17077645 - 17077588
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||  |||||||||||||||| |||||||||| |||||||| |||||||||    
T  17077645 agattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagaca 17077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 42674786 - 42674673
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  |||||||| |||||  |||||||||||||| ||||| |||||||||||||  || ||||  || || ||||| |||| ||| || ||     
T  42674786 agattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgatttgaggagaatcaagcggcca 42674687  T
Q  178 ccaaaagagagaaa 191  Q
    ||||||||||||||    
T  42674686 ccaaaagagagaaa 42674673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 7164296 - 7164384
Alignment:
Q  94 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaa 182  Q
    ||||||||||| |||||  ||||||||||||| ||||| | ||| |  |||||||||||| |||| |||||||| |||||||| |||||    
T  7164296 attatacctgatggagccctgaagaaggaaagagcataaataggaagagaggtcaagacaaactttagaagaactaaccgaccaccaaa 7164384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 12341591 - 12341456
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    |||||||||||| ||||||||||| || |||||||| | ||||||||| |  |  ||||||||||| |||||||| | ||| ||||| ||||| || ||     
T  12341591 agagattatacccgacggagctttaaaaaaggaaagtgtatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaagg 12341492  T
Q  190 aagcgactttgccaccccgataatctagactttata 225  Q
     | | ||| ||||| || || |||||||||||||||    
T  12341491 tacctactatgccaaccagacaatctagactttata 12341456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 6825598 - 6825684
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||| |||| |  ||| ||||||| ||||||||| |||||||||||||| ||||||||||| |   |||||||||| |||||    
T  6825598 aaaaatagaatcaagggaagaaattatacttgacggagccttgaagaaggaaagagcatagacaggtagaaaggtcaagacggactt 6825684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 8948348 - 8948278
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    |||||||| |||||||||||||||||||  ||||||||||| |  ||||||| |||| |||| ||||||||    
T  8948348 atacctgagggagctttgaagaaggaaatagcatagacagggagagaggtcaggacaaacttaagaagaac 8948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 10868437 - 10868498
Alignment:
Q  79 gattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    |||||||||  |||||||||||||||  ||||||| ||||||||||| ||||| ||||||||    
T  10868437 gattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacaggcaa 10868498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 36709701 - 36709762
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||| ||||||||    
T  36709701 agattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatcgacaggca 36709762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 48930512 - 48930577
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||| ||| |||||||||||    
T  48930512 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggtaagagcatagacagg 48930577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 19891469 - 19891557
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    ||||||||||  ||| ||||||||||||||||||||||| ||||||||  |||| ||||| |  |  ||||||||||| ||||| ||||    
T  19891469 agattcaatggaagatattatacctgacggagctttgaaaaaggaaagttcataaacaggaagcgcagtcaagacagatttgagtagaa 19891557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 47538071 - 47538135
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacag 154  Q
    |||||||||| |||| |||| ||||||||||||||| ||||||||||| |  ||||||| |||||    
T  47538071 agagattatatctgatggagttttgaagaaggaaagcgcatagacaggtagagaggtcaggacag 47538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 17914449 - 17914547
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    ||||||||||||||||||    || || |||||||  ||||||||||||||||||||   |||||| || |  |||| |||||||||||| ||||||||    
T  17914449 attaaaaatagattcaatagaggaaatgatacctgcgggagctttgaagaaggaaagaaaatagaccggaagagaggacaagacagacttaagaagaac 17914547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 20797918 - 20797958
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  20797918 atacctgagggagctttgaagaaggaaaaagcatagacagg 20797958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 22734082 - 22734014
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||| || ||||||||||||  ||||||||||| ||| ||||| ||||||||| | || |||||||||    
T  22734082 ttattcaatatagattcaatggaagagattatacatgatggagccttgaagaagaacagagcatagaca 22734014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 380624 - 380854
Alignment:
Q  9 agagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacgga 108  Q
    |||| ||||||| |||||||||||||||||||| ||||  ||||||||||        |||||||||||||||||||||| ||| || |||||||| | |    
T  380624 agagctccaagcaacccaggaaattttcctgttctccttgctccctccccaaaaaaaattattaaaaatagattcaatgatagaaatgatacctgatgaa 380723  T
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccg 208  Q
    ||||||||||||||||| ||||||||| |||  |||||||||||| |||| |||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  380724 gctttgaagaaggaaagagcatagacatgcagagaggtcaagacaaactttagaagaaccaaccggcccctaaaagagagaaaacgactttgccaccccg 380823  T
Q  209 ataatctagactttatagtcttcaacacagg 239  Q
    | ||||||||||| || |  |||||||||||    
T  380824 acaatctagacttaatggatttcaacacagg 380854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 22094608 - 22094478
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||  ||||||||||    
T  22094608 ttattaaataaagattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacaggcaaagaagtcaagacagctttgagaagaa 22094509  T
Q  167 ccaaccgacccccaaaagagagaaagcgact 197  Q
    ||||  | || ||||||||||| || |||||    
T  22094508 ccaaatggccaccaaaagagaggaaacgact 22094478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 42259995 - 42260193
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaataga--ttcaatgacagagattat 98  Q
    |||||| ||||| ||||||| | |||||||||||||| ||||||||||||||||||||       ||| ||  ||||| |  |||||||  | |||||||    
T  42259995 aaacaagcagagctccaagcaatccaggaaattttccagttatcctcactccctccccaatttttttttttttaaataaagtttcaatggaaaagattat 42260094  T
Q  99 acctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgact 197  Q
    | |||| |||||||||||||||||||| || |||||||| |  ||||||||||||||||||||||||| ||| || || ||||| || |||||||||||    
T  42260095 atctgatggagctttgaagaaggaaagagcgtagacaggaagcgaggtcaagacagacttgagaagaatcaaacggcctccaaatgatagaaagcgact 42260193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 42514500 - 42514652
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  42514500 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 42514599  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  42514600 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 42514652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 216
Target Start/End: Complemental strand, 28535074 - 28534886
Alignment:
Q  28 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 127  Q
    |||||||| || |||||||||| |||||| |       ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |    
T  28535074 gaaatttttcttttatcctcaccccctcctcaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtg 28534975  T
Q  128 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatcta 216  Q
    |||||||||| |  |  |||| ||| ||||| ||||||| ||| ||||| |||||||| || || ||||||||||| || || ||||||    
T  28534974 catagacaggtagagcagtcaggacggacttaagaagaatcaaacgaccaccaaaagaaaggaaccgactttgccaacctgacaatcta 28534886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 21084666 - 21084777
Alignment:
Q  71 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 170  Q
    |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||| || ||    
T  21084666 taaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaggactaa 21084765  T
Q  171 ccgacccccaaa 182  Q
    |||||| |||||    
T  21084766 ccgaccaccaaa 21084777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 23239163 - 23239315
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  |||| ||| ||||| ||||||    
T  23239163 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 23239262  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | | | ||||| || ||||| || || ||||||||||| || || ||||||||    
T  23239263 atcgaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 23239315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 30731718 - 30731522
Alignment:
Q  22 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 121  Q
    ||||| || ||||| || || ||||||||||||||||       ||||||||| | ||||||||||  |||||||||||||| |||||||||||||||||    
T  30731718 acccaagatatttttcttttttcctcactccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaagg 30731619  T
Q  122 aaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    |||| ||||||||||| |  |  |||| ||| ||||| || |||| ||| ||||| || ||||| || || ||||||| ||| || || ||||||||    
T  30731618 aaagtgcatagacaggtagagcagtcaggacggactttagtagaatcaaacgaccaccgaaagataggaaccgacttttccaaccagacaatctaga 30731522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 30509382 - 30509231
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | ||| ||||||  ||||||||||||||  |||||||| ||||||||||| |||||||||||||  || ||||| || |  || ||||| |    
T  30509382 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaagga 30509283  T
Q  167 ccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
     ||| ||||| |||||||||||||| || || | ||||||||| ||||||||    
T  30509282 tcaagcgaccaccaaaagagagaaaccggctattccaccccgacaatctaga 30509231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 30549725 - 30549574
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | ||| ||||||  ||||||||||||||  |||||||| ||||||||||| |||||||||||||  || ||||| || |  || ||||| |    
T  30549725 ttattaaacaaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacaggcagagaagtcaacacggctttcagaagga 30549626  T
Q  167 ccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
     ||| ||||| |||||||||||||| || || | ||||||||| ||||||||    
T  30549625 tcaagcgaccaccaaaagagagaaaccggctattccaccccgacaatctaga 30549574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 36256562 - 36256692
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||| || |||  |||||||  |||||  ||||| |||||||||||||| ||||||||||| |  | ||||||||||||||| | ||||| ||| |    
T  36256562 aaaatagaatctatggaagagattgcacctgttggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagc 36256661  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| |||||||| ||||| |||||||||||    
T  36256662 gacctccaaaagaaagaaaccgactttgcca 36256692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 588299 - 588412
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||| | | ||||||||||||||  |||| |||||||||||||  |||||||||||||| || ||||| ||||| || ||     
T  588299 agattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacaggcagagaggtcaagacagattttagaagtaccaagcggcca 588398  T
Q  178 ccaaaagagagaaa 191  Q
    || |||||||||||    
T  588399 ccgaaagagagaaa 588412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 20208115 - 20207977
Alignment:
Q  31 attttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcat 130  Q
    |||||||| |||||||||||||| ||||       |||| ||| || ||| | ||||  ||||||||||| ||| |||||||||||||||||||| ||||    
T  20208115 attttcctattatcctcactcccaccccaaaaaaatttaataagaagagaattaatggaagagattatacatgatggagctttgaagaaggaaagcgcat 20208016  T
Q  131 agacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    |||||||||  ||||| | ||||||||| | ||||||||    
T  20208015 agacaggcagagaggttaggacagactttaaaagaacca 20207977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 35122036 - 35121923
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||||||||||  || ||||| || || || || |||| ||| |||||     
T  35122036 agattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacaggcagagaagtcaaaactgattttaggagaatcaagcgacca 35121937  T
Q  178 ccaaaagagagaaa 191  Q
    ||||| ||||||||    
T  35121936 ccaaacgagagaaa 35121923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 35983177 - 35983036
Alignment:
Q  40 ttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||||||||| ||||||||       ||||||||| | ||||||||||  | |||||||||||||| |||||||||| |||||||| ||||||||||| |    
T  35983177 ttatcctcaccccctccccaaaaaattttattaaacaaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcatagacaggta 35983078  T
Q  140 atgaggtcaagacagacttgagaagaaccaaccgacccccaa 181  Q
      |  |||| ||||||||| ||||||| ||| ||||| ||||    
T  35983077 gagcagtcaggacagacttaagaagaatcaaacgaccaccaa 35983036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 6050048 - 6050123
Alignment:
Q  94 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||  |||||||  |||||||| | ||||||||    
T  6050048 attatacctgatggagctttgaagaaggaaagcgcatagacaggcagcgaggtcagaacagactttaaaagaacca 6050123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 8299542 - 8299471
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| | |||||||||   ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  8299542 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 8299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 25856775 - 25856640
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  || |||||||| ||||| |||| ||| ||||| ||||| || ||     
T  25856775 agagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaatcgcagttaagacagatttgagcagaatcaagcgaccaccaaaggaaagg 25856676  T
Q  190 aagcgactttgccaccccgataatctagactttata 225  Q
     | | ||| ||||| || || |||||||||||||||    
T  25856675 tacctactatgccaaccagacaatctagactttata 25856640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 27796276 - 27796335
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  27796276 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 27796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 33170450 - 33170589
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  | ||||||||||||||||||||||||| |||||||| ||||||||||| | ||  |||| |||| | |||||||| | ||||||  |     
T  33170450 agattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcatagacaggtagtgcagtcaggacaaatttgagaaggatcaaccggtca 33170549  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctag 217  Q
    |||||||| || || ||||| ||||| || || |||||||    
T  33170550 ccaaaagaaaggaaccgactatgccaaccagacaatctag 33170589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 41590875 - 41590970
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| | ||||||||| |  ||||||||||||||||| || |||||    
T  41590875 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagtatagacaggtagagaggtcaagacagactttaggagaac 41590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 4297663 - 4297553
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 171  Q
    ||||||||| |||| |  ||| ||||||||||||||||  |||||||||||||| ||||||||||| |  |||||||||| |||||| || ||||| |||    
T  4297663 aaaaatagaatcaagggaagaaattatacctgacggagtcttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttaggagaactaac 4297564  T
Q  172 cgacccccaaa 182  Q
    || || |||||    
T  4297563 cggccaccaaa 4297553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26261742 - 26261608
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||||||  |||||| | | ||| ||||||||||| | |||||||||||| ||||       || ||| |||||| |||||||   |||||||||||    
T  26261742 aaacaaacagttttccaaccaatccaagaaattttcctatgatcctcactcccaccccaaaaaaatt-attcaaaataaattcaatagaagagattatac 26261644  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacag 136  Q
    |||| |||||||||||||||||||| ||||||||||    
T  26261643 ctgaaggagctttgaagaaggaaagagcatagacag 26261608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 10486232 - 10486137
Alignment:
Q  96 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaa 191  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||  || ||||||||||| || | ||||||||| || || ||||| || |||||    
T  10486232 tatacctgatggagctttgaagaaagaaatggcatagacaggcagagaagtcaagacagattttaaaagaaccaaacgtcctccaaaggaaagaaa 10486137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 15862042 - 15861963
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    |||||| | ||||||||||  |||||| |||||||||| | |||||||||| ||||| ||| ||||||||||||||||||    
T  15862042 attaaataaagattcaatggaagagataatacctgacgaatctttgaagaaagaaagagcacagacaggcaatgaggtca 15861963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 19838368 - 19838455
Alignment:
Q  90 agagattatacctgacggagcttt-gaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 176  Q
    ||||||| |||||| | ||||||| ||||||||||||  ||||||||||||| || |||| ||||||||||||||||| ||| |||||    
T  19838368 agagattgtacctgtcagagcttttgaagaaggaaagaacatagacaggcaaagaagtcaggacagacttgagaagaatcaaacgacc 19838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22174419 - 22174258
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||| | ||||||| |  || ||||||||| |||||||||||||||||| ||       || |  ||||| ||||||||||  |||||||||||    
T  22174419 aaacaaacagcgctccaagcaatacaagaaattttcatgttatcctcactccctcgccaatttttttaaaaaaaaagagattcaatggaagagattatac 22174320  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaag 164  Q
    |||| ||| | |||||||| ||||  ||||||||||| | ||| |||| |||||| ||||||||    
T  22174319 ctgatggaaccttgaagaaagaaa--gcatagacaggaattgaagtcatgacagatttgagaag 22174258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 19506790 - 19506852
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  19506790 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaagcaa 19506852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 29572206 - 29572148
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29572206 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 29573583 - 29573525
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29573583 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29573525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 29574960 - 29574902
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29574960 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29574902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 29576337 - 29576279
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29576337 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29576279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 29577714 - 29577656
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29577714 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29577656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 29579091 - 29579033
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||  |||||||    
T  29579091 agagattatacttgacagagctttgaagaaggaaagtgcatagacaggcagagaggtca 29579033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 3581016 - 3580834
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    |||||||||||||||  | ||||| | ||||||||| |||||||||| ||| ||||       |||| ||| ||||||||| |||  |||||||||||||    
T  3581016 acaaacagagttccagtcaacccaagcaattttcctattatcctcacccccaccccaaatttttttaataagaatagattcgatggaagagattatacct 3580917  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
       |||||| |||| ||||| |||||||||||| ||| ||| | ||| || || ||||| |||| ||| || |||||| ||||    
T  3580916 acgggagctctgaaaaaggatagggcatagacatgcattgaagacaaaacggatttgaggagaatcaaacggcccccataaga 3580834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 10781005 - 10781050
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||    
T  10781005 agagattatacctgacggagctttgaaaaaggaaagtgcatagaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 22437998 - 22438067
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||| |||||||||||   ||||||||||||||| |||||| ||||||||||||  |||||||||    
T  22437998 tttattaaacatagattcaatataagagattatacctgagggagctatgaagaaggaaaaagcatagaca 22438067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 225
Target Start/End: Complemental strand, 33385299 - 33385174
Alignment:
Q  100 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgacttt 199  Q
    ||||||||||||||||| |||||||| ||||||||||| |  |  ||||||||||| |||||||| | ||| ||||| ||||| || ||  | | ||| |    
T  33385299 cctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaagcgaccaccaaaggaaaggtacctactat 33385200  T
Q  200 gccaccccgataatctagactttata 225  Q
    |||| || || |||||||||||||||    
T  33385199 gccaaccagacaatctagactttata 33385174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 38358259 - 38358320
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||||||||||||    
T  38358259 agattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagacaggca 38358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 6885717 - 6885759
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatag 132  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  6885717 agagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 218
Target Start/End: Original strand, 31865089 - 31865229
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||| || || | |||| | ||||||||||||  |||||||||| ||| |||||||  | ||| || || |||||||| || ||     
T  31865089 agattcaatggaagagattttaacttatggagttctgaagaaggaaaaagcatagacagacaaagaggtcagaatagatttaagtagaaccaagcggcct 31865188  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    |||||||||||||| || |||| ||| ||||| || |||||    
T  31865189 ccaaaagagagaaatcggcttttccaacccgacaacctaga 31865229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 27218547 - 27218339
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||       ||||||||| | ||||||||||| ||| |||||||    
T  27218547 aaacaaacagagctctaagcgatccaggaaattttcctgttatcctcactacctccccaaaaaaatttattaaacaaagattcaatgagagaaattatac 27218448  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||| |||||||||||||| ||||||||| | |  || |||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||||||    
T  27218447 ctgacggagccttgaagaaggaaagtgcatagacatgaagcgaagtcaagacagacttaagaagaaccaagcgacccccgaaagatagaaaacgactttg 27218348  T
Q  201 ccaccccga 209  Q
    |||||||||    
T  27218347 ccaccccga 27218339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 33820983 - 33820752
Alignment:
Q  2 aacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacc 101  Q
    ||||||||| | ||||||||| ||| |||||||||||||||| ||||||||||||||       ||| ||||||||| ||||||||  |||||| |||||    
T  33820983 aacaaacagtgctccaagcgagccaagaaattttcctgttattctcactccctccccaaaaatttttgttaaaaataaattcaatggaagagataatacc 33820884  T
Q  102 tgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgc 201  Q
    ||| ||||||||||||||||||||  |||||| |||||  ||||||| |||||| |||||||||| |||||||||| ||||||| ||||| ||  |||||    
T  33820883 tgatggagctttgaagaaggaaagaacatagataggcagagaggtcaggacagaattgagaagaatcaaccgacccgcaaaagatagaaaacggttttgc 33820784  T
Q  202 caccccgataatctagactttatagtcttcaa 233  Q
    || | ||| ||||||||||| ||||| |||||    
T  33820783 catctcgacaatctagacttaatagtattcaa 33820752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 225
Target Start/End: Original strand, 45993357 - 45993515
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | |||||||| |  |||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||| ||||| ||||||||||    
T  45993357 ttattaaataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacaggcagagaggtcaacacagatttgagaagaa 45993456  T
Q  167 ccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactttata 225  Q
    |||| ||||| ||||||||||| || ||||| | ||| || || | |||||||||||||    
T  45993457 ccaaacgaccaccaaaagagaggaaacgactattccaacctgacagtctagactttata 45993515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 17721377 - 17721565
Alignment:
Q  28 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 127  Q
    |||||||| || |||||||||| ||||||||       ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |    
T  17721377 gaaatttttcttttatcctcaccccctccccaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtg 17721476  T
Q  128 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatcta 216  Q
    |||||||||| |  |  |||| |||  |||| ||||||||||| ||||| |||||||| || || ||||||||||| || || ||||||    
T  17721477 catagacaggtagagcagtcaggacgaacttaagaagaaccaaacgaccaccaaaagaaaggaaccgactttgccaaccagacaatcta 17721565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 4937488 - 4937336
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  4937488 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 4937389  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  4937388 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 4937336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 13440863 - 13440990
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||| | ||||| |||||||| ||||| ||| |||||||||    
T  13440863 gagattatacctgctggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagacatatttgagtagaaccaagcgaccaccacaagagagaa 13440962  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  13440963 accgactattccaacccgacagtctaga 13440990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 19544827 - 19544647
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||| |||| ||||||  ||||||||| |||||||||| |||||| ||||||||        | ||||||||||||||| ||||| ||| || ||||    
T  19544827 aaacaaatagagctccaagaaacccaggaagttttcctgttctcctcattccctccc--aatttttgtattaaaaatagatttaatgatagaaatgatac 19544730  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaa 183  Q
      | ||||||||||||||||||||| |||||||||| ||  ||||| |||||| |||| || ||||||||||| |||||||||    
T  19544729 tcggcggagctttgaagaaggaaagagcatagacagacagagaggttaagacaaacttaagtagaaccaaccggcccccaaaa 19544647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 34104200 - 34104314
Alignment:
Q  9 agagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacgga 108  Q
    |||| ||||||| |||||||||||||||||||| ||||||| ||||||||       | ||||||||||||||||||||| ||| || |||| |||||||    
T  34104200 agagctccaagcaacccaggaaattttcctgttctcctcacgccctccccaaaattttgtattaaaaatagattcaatgatagaaatgatacttgacgga 34104299  T
Q  109 gctttgaagaaggaa 123  Q
    |||||||||||||||    
T  34104300 gctttgaagaaggaa 34104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 41805119 - 41805003
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||||| |||| |  ||| ||||||||||||| ||| ||||||||||| || ||||||||||| |  ||||||||||||||||| ||||||    
T  41805119 tttagtaaaaatagagtcaagggaagaaattatacctgacgaagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaaga 41805020  T
Q  166 accaaccgacccccaaa 182  Q
    || ||||| || |||||    
T  41805019 actaaccggccaccaaa 41805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 11276608 - 11276537
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  11276608 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 11276537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 29968754 - 29968825
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  29968754 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 29968825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 25018662 - 25018556
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||||| |||| |  ||| ||||||||||||| ||| ||||||||||||||  |||||| ||| || ||||||||||||||||| ||||||    
T  25018662 tttagtaaaaatagagtcaagggaagaaattatacctgacgaagccttgaagaaggaaagaacatagataggtaaagaggtcaagacagactttagaaga 25018563  T
Q  166 accaacc 172  Q
    || ||||    
T  25018562 actaacc 25018556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 45164900 - 45164770
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||| || |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |  | ||||||||||||||| | ||||| ||| |    
T  45164900 aaaatagaatctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacagactttaaaagaatcaagc 45164801  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| ||||| || ||||| |||||||||||    
T  45164800 gacctccaaaggaaagaaaccgactttgcca 45164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 41340330 - 41340398
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    |||||||| | ||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  41340330 ttattaaataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagaca 41340398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 19735310 - 19735372
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  19735310 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaa 19735372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 28173331 - 28173254
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    ||||||||||  |||||| ||| |||||||||||||||||||  |||| |||||||||| |||||||||||| |||||    
T  28173331 agattcaatggaagagataatatctgacggagctttgaagaaaaaaagagcatagacagacaatgaggtcaaaacaga 28173254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 34232505 - 34232573
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| |||  |||||||  ||||||||    
T  34232505 agagattatacctgatggagctttgaagaaggaaagcgcatagacaagcagagaggtcagaacagactt 34232573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 46626603 - 46626691
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    |||||||| | |||||||| |  |||||||||| |||| |||||||||||||| ||||||||||||||||| |  || |||||||||||    
T  46626603 ttattaaataaagattcaagggaagagattatatctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 46626691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 23054318 - 23054259
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  |||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  23054318 agattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacagg 23054259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 23887829 - 23887920
Alignment:
Q  142 gaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactttatagtcttcaa 233  Q
    ||||||| ||||||||||||||||| ||| || ||||||||||| ||||| |  |||||||| | ||| ||||||||||| ||||| |||||    
T  23887829 gaggtcaggacagacttgagaagaatcaatcggcccccaaaagatagaaaccagctttgccatctcgacaatctagacttgatagtattcaa 23887920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 36227499 - 36227440
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  36227499 agattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacagg 36227440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 17056334 - 17056428
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||||||||||| || ||| ||||||||||||  ||||||||||| |  |||| |||||||||||| || |||||||  ||||| ||||||||    
T  17056334 gagattatacctgatggtgctctgaagaaggaaaaagcatagacaggaagagaggacaagacagacttaaggagaaccagacgaccaccaaaaga 17056428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 4078081 - 4078130
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  4078081 agagattatacctgatggagctctgaagaaggaaagcgcatagacaggca 4078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 4164775 - 4164929
Alignment:
Q  22 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 121  Q
    ||||||| |||||| || | |||||||||||| ||||       |||| | |||||||||||||||  ||||||||||||||  |||||| |||| || |    
T  4164775 acccaggcaatttttctatgatcctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaag 4164874  T
Q  122 aaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 176  Q
    ||||||| ||||||||||  || | || ||||||||| || |||| ||| |||||    
T  4164875 aaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgacc 4164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 34207066 - 34207220
Alignment:
Q  22 acccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaagg 121  Q
    ||||||| |||||| || | |||||||||||| ||||       |||| | |||||||||||||||  ||||||||||||||  |||||| |||| || |    
T  34207066 acccaggcaatttttctatgatcctcactcccaccccaaaaaaatttaattaaaatagattcaatggaagagattatacctgcgggagctctgaaaaaag 34207165  T
Q  122 aaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc 176  Q
    ||||||| ||||||||||  || | || ||||||||| || |||| ||| |||||    
T  34207166 aaagggcgtagacaggcagcgaagacaggacagacttaaggagaatcaagcgacc 34207220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 34792004 - 34791964
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  34792004 atacctgagggagctttgaagaaggaaagggcatagacagg 34791964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 23899005 - 23899096
Alignment:
Q  142 gaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactttatagtcttcaa 233  Q
    ||||||| ||||||||||||||||| ||| |  ||||||||||| ||||| |  |||||||| | ||| ||||||||||| ||||| |||||    
T  23899005 gaggtcaggacagacttgagaagaatcaatcagcccccaaaagatagaaaccagctttgccatctcgacaatctagacttgatagtattcaa 23899096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 31423386 - 31423433
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  31423386 agattcaatggaagagattatacctgacggagctttgaaaaaggaaag 31423433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 45871543 - 45871614
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| |||||||||||   ||| || |||||||| |||||||||||||||||||| ||||| |||||    
T  45871543 tttattaaatatagattcaatagaagaaataatacctgaaggagctttgaagaaggaaagagcataaacagg 45871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 2820057 - 2820012
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||    
T  2820057 agagattatacctgacggggctttgaagaaggaaagaacatagaca 2820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 6335745 - 6335652
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||| |||||| |||  ||||||| ||| ||  ||||| |||||||||||||| ||||||||||| || |  |||||||||||||| |||||||    
T  6335745 aaaagagattctatggaagagattgtacatgctggagccttgaagaaggaaagagcatagacaggtaacgcagtcaagacagactttagaagaa 6335652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 18671952 - 18672021
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    |||||||| | ||||||||||  |||||||||||||||   ||||||||||||||||||  |||||||||    
T  18671952 ttattaaataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacag 18672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 18768200 - 18768261
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    ||||||||||  ||||||||||| ||  |||||||||||||| ||||| |||||||||||||    
T  18768200 agattcaatggaagagattatacttgttggagctttgaagaaagaaagagcatagacaggca 18768261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 22819047 - 22818958
Alignment:
Q  96 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    ||||||||| |||||| ||||||||||||| ||||||||||| |  |||| || ||||| ||| |||||||| |  ||||| ||||||||    
T  22819047 tatacctgatggagctctgaagaaggaaagtgcatagacaggaagagaggacaggacagccttaagaagaactagacgaccaccaaaaga 22818958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 29917024 - 29917069
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||    
T  29917024 agagattgtacctgagggagctttgaagaaggaaagtgcatagaca 29917069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39658812 - 39658755
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctcccc 58  Q
    |||||||| ||| ||||||| | |||| ||||||| ||||||||||||||||||||||    
T  39658812 aaacaaactgagctccaagcaatccagaaaatttttctgttatcctcactccctcccc 39658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 39930932 - 39930887
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||    
T  39930932 agagattatacatgatggagctttgaagaaggaaagagcatagaca 39930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 28740293 - 28740222
Alignment:
Q  68 tattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||| ||||||||||||||    | |||||||||| | |||||||||||||||||||| ||||| |||||||    
T  28740293 tatttaaaatagattcaatagatgggattatacctaagggagctttgaagaaggaaagagcataaacaggca 28740222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 4344630 - 4344695
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcata 131  Q
    ||||||||| |||||||||||   ||||||||||| ||| ||||||||||| ||| ||| ||||||    
T  4344630 tttattaaacatagattcaatagaagagattatacatgagggagctttgaaaaagaaaatggcata 4344695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 45460099 - 45460184
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    |||||||||| ||||  ||||||||||||||  |||||| |||| || |||||||| || ||||||| ||| | || |||||||||    
T  45460099 aaaatagattaaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtatacaggcagtgaagacaggacagactt 45460184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 18317194 - 18317138
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    |||||||||||||| || || ||||||||||| ||| || || ||||||||||||||    
T  18317194 attaaaaatagatttaaggatagagattatacttgagggggccttgaagaaggaaag 18317138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 37942207 - 37942143
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||| |||||||||   |||||| ||||| ||||| |||||||||||||||| | ||||||||||    
T  37942207 aaaagagattcaatataagagataatacccgacggggctttgaagaaggaaatgacatagacagg 37942143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 25193826 - 25194041
Alignment:
Q  24 ccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaa 123  Q
    ||||||||||||||||||||||||| |||||||||        |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  25193826 ccaggaaattttcctgttatcctcattccctccccaaattttgttataaaaaatagattcaatgatagagattatacctgacagagctttgaagaaggaa 25193925  T
Q  124 agggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagacttta 223  Q
    || ||||||||||  |  |||||||||||| |||| | ||| | ||||||||| ||  |||| ||||||||||| ||||||||||| ||||| ||||| |    
T  25193926 agagcatagacagtaagcgaggtcaagacaaactttaaaaggatcaaccgaccaccgtaagatagaaagcgactctgccaccccgacaatctggacttaa 25194025  T
Q  224 tagtcttcaacacagg 239  Q
    | || | |||||||||    
T  25194026 ttgtatgcaacacagg 25194041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 15539780 - 15539938
Alignment:
Q  9 agagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacgga 108  Q
    |||| ||||||| ||||||||||||||| |||| ||||||||||||||||       ||||||||||||||||||||||| ||| || ||||||||||||    
T  15539780 agagctccaagcaacccaggaaattttcatgttctcctcactccctccccaaaattttttattaaaaatagattcaatgatagaaatgatacctgacgga 15539879  T
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    ||||||||||||||||| ||||| |||||||  ||||||||||||||||| ||||||||    
T  15539880 gctttgaagaaggaaagagcataaacaggcagagaggtcaagacagactttagaagaac 15539938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 6245799 - 6246005
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||||| || ||||||  | ||||||||||||||| ||||| |||||||||||||       ||||||||| ||| |||||||||||| ||||||||    
T  6245799 aaacaaacaaagctccaagaaatccaggaaattttcctattatcatcactccctccccaaatttttttattaaatataaattcaatgacagggattatac 6245898  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    ||||||||||||||||||||||||| ||||||||| | || | ||||| ||||||||| ||||  |||| | |||| ||| ||||||| || |||||| |    
T  6245899 ctgacggagctttgaagaaggaaagagcatagacaagtaacgcggtcaggacagacttaagaatgaccaccagaccaccataagagagcaaacgacttcg 6245998  T
Q  201 ccacccc 207  Q
    |||||||    
T  6245999 ccacccc 6246005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 29721324 - 29721131
Alignment:
Q  13 ttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           ||||| ||||||||||||  |||||||||||||||||||||||    
T  29721324 ttccaagcgatccaggaaattttcctgttatcctcactccctccccaaaaaaacaatttaaacatagattcaatggaagagattatacctgacggagctt 29721225  T
Q  113 tgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccc 206  Q
    |||| |||||||| |||||||||||||| |||| || |||||||||||| | || ||| || ||||| || ||||| || ||||| ||||||||    
T  29721224 tgaaaaaggaaagagcatagacaggcaaagaggacaggacagacttgagcaaaatcaatcggcccccgaatgagaggaaacgactctgccaccc 29721131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 36025236 - 36025360
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||       ||||||||||||||| | ||||  |||||||||||    
T  36025236 aaacaaacagtgctccaagcgatccaggaaattttcctgttatcctcactccctccccaaatttttttattaaaaatagagttaatggaagagattatac 36025335  T
Q  101 ctgacggagctttgaagaaggaaag 125  Q
    |||||||||||||||||||||||||    
T  36025336 ctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 216
Target Start/End: Original strand, 9923343 - 9923531
Alignment:
Q  28 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 127  Q
    |||||||| || |||||||||| |||||||        ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |    
T  9923343 gaaatttttcttttatcctcaccccctcccgaaaaaaatttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtg 9923442  T
Q  128 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatcta 216  Q
     ||||||||| |  |  |||||||| ||||| ||||||||||| ||||| |||||||| || || ||||||||||| || || ||||||    
T  9923443 tatagacaggtagagcagtcaagacggacttaagaagaaccaaacgaccaccaaaagaaaggaatcgactttgccaaccagacaatcta 9923531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 12341295 - 12341451
Alignment:
Q  14 tccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagcttt 113  Q
    ||||||| | |||||||||||||||||||||||||||||||||||        ||   ||||||| ||||||||  |||||||||||| ||| |||||||    
T  12341295 tccaagcaatccaggaaattttcctgttatcctcactccctccccaaaatatatttaaaaaaataaattcaatggaagagattatacccgacagagcttt 12341394  T
Q  114 gaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 170  Q
    ||| |||||||| || ||||||||||  |||| || ||| |||||||||||||||||    
T  12341395 gaaaaaggaaagagcgtagacaggcagagaggacatgacggacttgagaagaaccaa 12341451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 16375438 - 16375332
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||| ||||||||||||||| | |||||||||||  |||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  16375438 gagattatacctgttggaggtttgaagaaggaaagtgtatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 16375339  T
Q  191 agcgact 197  Q
    | |||||    
T  16375338 accgact 16375332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 4987488 - 4987306
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    |||||||||||||||| | | ||| || |||||||| | ||||||||| || ||||        |||||||| | |||||||| |  ||| |||||||||    
T  4987488 acaaacagagttccaacctatccaagacattttcctatgatcctcactaccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacct 4987389  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    ||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| |||||||||||||| || || ||||||||    
T  4987388 gacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccaccaaaaga 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 36157935 - 36158021
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagaca 153  Q
    |||||||| | ||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||||||||    
T  36157935 ttattaaacaaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaagaca 36158021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 7925166 - 7925318
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  7925166 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 7925265  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||  ||| || || ||||||||    
T  7925266 atcaaacgaccaccgaaagataggaaccgacttgnccaaccagacaatctaga 7925318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 37165543 - 37165431
Alignment:
Q  4 caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctg 103  Q
    ||||| ||| ||||||| | |||||| |||||||||||||||||||||||||||         | |||||||||||||||||||  ||||||||||||||    
T  37165543 caaaccgagctccaagctatccaggagattttcctgttatcctcactccctcccaaaaaaaaataattaaaaatagattcaatggaagagattatacctg 37165444  T
Q  104 acggagctttgaa 116  Q
    |||||||||||||    
T  37165443 acggagctttgaa 37165431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 182
Target Start/End: Original strand, 36493167 - 36493277
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 171  Q
    ||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| || ||||| |||    
T  36493167 aaaaatagaatcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttaggagaactaac 36493266  T
Q  172 cgacccccaaa 182  Q
    || || |||||    
T  36493267 cggccaccaaa 36493277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 4992056 - 4991959
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaa 163  Q
    ||||||||||||||||||| ||  |||||||||| ||||| |||||||||||||||||||  |||||||| |||| || || |||||| |||||||||    
T  4992056 tttattaaaaatagattcagtggaagagattatatctgacagagctttgaagaaggaaagatcatagacatgcaaagaagtaaagacatacttgagaa 4991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 12332628 - 12332732
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||||| |||| |  ||| ||||||||||| ||||| ||||||||||| || ||||||||||| |  ||||||||||||||||| ||||||    
T  12332628 tttagtaaaaatagagtcaagggaagaaattatacctgatggagccttgaagaaggagagagcatagacaggtagagaggtcaagacagactttagaaga 12332727  T
Q  166 accaa 170  Q
    |||||    
T  12332728 accaa 12332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 8300583 - 8300720
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| |||||||||||| |||||||| ||||||||||| |  |  |||| ||| ||||| ||||||    
T  8300583 tttattaaacaaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagtgcatagacaggtagagcagtcaggacggactttagaaga 8300682  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgcca 203  Q
    | ||| || || || || || ||||| |||||||||||    
T  8300683 atcaaacggccaccgaaggaaagaaaccgactttgcca 8300720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 23942879 - 23942992
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||||| |||||||||||||| || ||||  || || |||||||| | ||| || ||     
T  23942879 agattcaatggaagagattatacatgatggagctttgaagaaggaaagagcatagacaggcaaagaagtcagaactgatttgagaaggatcaagcggcca 23942978  T
Q  178 ccaaaagagagaaa 191  Q
    || |||||||||||    
T  23942979 ccgaaagagagaaa 23942992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 26774645 - 26774455
Alignment:
Q  28 gaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaaggg 127  Q
    ||||||||||| |  |||||||| |||||||       |||||| |||| | |||||||   ||||||||||| ||||||||||||||||||||| || |    
T  26774645 gaaattttcctatgttcctcacttcctccccaaaaaaatttatttaaaagatattcaatagaagagattatacatgacggagctttgaagaaggagagag 26774546  T
Q  128 catagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    |||||| ||| || || |||| ||||||||| |  |||| ||| |||||  ||||||| ||||| ||||| | ||| || |||||||||||    
T  26774545 catagataggtaacgaagtcaggacagacttaatgagaatcaaacgaccaacaaaagacagaaaacgactcttccaaccagataatctaga 26774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 17659645 - 17659713
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||| ||| |||||||| ||||||||||| |||||||||||||| ||||||| |||||||||    
T  17659645 agagattatacttgatggagcttttaagaaggaaagcgcatagacaggcaaagaggtcaggacagactt 17659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 13878835 - 13878776
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  13878835 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 13878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 32267335 - 32267486
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | ||||||||||  ||||||||||||||||  ||||||||| |||||||| ||||||||||| |  |  |||| ||| |||||  ||||||    
T  32267335 ttattaaacaaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggtagagcagtcatgacggacttttgaagaa 32267434  T
Q  167 ccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
     ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  32267435 tcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 32267486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 7453133 - 7453235
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | |||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||||||||| |  || ||||||||||| || | |||||    
T  7453133 ttattaaataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggtagagaagtcaagacagattttaaaagaa 7453232  T
Q  167 cca 169  Q
    |||    
T  7453233 cca 7453235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 24794512 - 24794574
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  24794512 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaa 24794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 6901729 - 6901786
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||    
T  6901729 agattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagaca 6901786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 41691183 - 41691001
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    |||||||||||||||| | ||||| | |||||| || | |||||||| ||| ||||       |||| | |||||||||||||||  |||||||||||||    
T  41691183 acaaacagagttccaatctacccaagcaatttttctatgatcctcacccccaccccaaaatattttaattaaaatagattcaatggaagagattatacct 41691084  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |  |||||| |||| || |||||||  |||||||||| ||| | || ||||||||| || |||| ||| ||||| ||| ||||    
T  41691083 gcgggagctctgaaaaaagaaagggtgtagacaggcagtgaagacaggacagacttaaggagaatcaatcgaccaccataaga 41691001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 17700284 - 17700376
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaa 182  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||||| |  |  ||||||||||| |||||||| | ||| ||||| |||||    
T  17700284 agagattatatctgacggagctttgaaaaaggaaagtgcatagacaggaagcgcagtcaagacagatttgagaagtatcaatcgaccaccaaa 17700376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 20825079 - 20825239
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttg-aagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaag 164  Q
    ||||||||| | |||||||||   ||||||||||||||||||||||||| || |||||||| ||||||||||| |  |  ||||||||| | ||||| ||    
T  20825079 tttattaaacaaagattcaatagaagagattatacctgacggagctttgaaaaaaggaaagtgcatagacaggaagcgcagtcaagacatatttgagcag 20825178  T
Q  165 aaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactttata 225  Q
    || ||| ||||| ||||| || ||  | | ||| ||||| || || |||||||||||||||    
T  20825179 aatcaagcgaccaccaaaggaaaggtacctactatgccaaccagacaatctagactttata 20825239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 41664728 - 41664576
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  | ||||||||||||||||||||||||| |||||||| || ||||||||    |  |||| ||| ||||| || |||    
T  41664728 tttattaaacaaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagtgcgtagacaggtggagcagtcaggacggactttagtaga 41664629  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  41664628 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 41664576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 45255176 - 45255097
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||| ||  |||||||  |||||||| | ||||||||    
T  45255176 agagattatacctgatggagctttgaagaatgaaagcgcatagacagacagcgaggtcagaacagactttaaaagaacca 45255097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 11393679 - 11393617
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  11393679 agattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacaggcaa 11393617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 43612533 - 43612476
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||  ||||||||||||||| |||||||| ||||| |||||||||||||||    
T  43612533 agattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagaca 43612476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 18187949 - 18187995
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  18187949 agagattgtacctgacggagctttgaagatggaaagagcatagacag 18187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 43775131 - 43775057
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    |||||||||||||||||| || |  || |  |||||||||||||| |||||||||||||||||||| ||| ||||    
T  43775131 tttattaaaaatagattcgataaaggaaacgatacctgacggagccttgaagaaggaaagggcataaacatgcaa 43775057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 28992555 - 28992510
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||    
T  28992555 agagattatacctgacgggactttgaagaaggaaagagcatagaca 28992510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 8445596 - 8445652
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    |||||| ||||||||||||  ||| || |||||||| ||||||||||||||||||||    
T  8445596 attaaatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 28453805 - 28453757
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||||||||||||| ||||||||||| || |||||||| ||||||||||    
T  28453805 gagattatacctgagggagctttgaaaaaagaaagggcgtagacaggca 28453757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 10530464 - 10530510
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  10530464 agagattatacctgaaggagctttgaaaaaggaaagtgcataaacag 10530510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 43249152 - 43249090
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||| ||||||||||||||| ||| |||| |||||| |||| |||| || ||||||    
T  43249152 agattcaatgaaagagattatacctgatggaactttaaagaagaaaagagcatggataggcaa 43249090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 12135015 - 12135072
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||||||||  |||||||||||| || | |||||| ||||||||||| |||||||||    
T  12135015 agattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 5585470 - 5585538
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagaca 135  Q
    ||||| || ||||||||||||  ||||||||||| ||| ||||| ||||||||| | || |||||||||    
T  5585470 ttattcaatatagattcaatggaagagattatacatgatggagccttgaagaagaacagagcatagaca 5585538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 43516170 - 43516000
Alignment:
Q  4 caaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntt-tattaaaaatagattcaatgacagagattatacct 102  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||       || |||||||||||||||||||||||||||||||||||    
T  43516170 caaacagagctccaagcaacccaggaaattttcctgttatcc-cactccctccccaatttttttatattaaaaatagattcaatgacagagattatacct 43516072  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccga 174  Q
    || ||||| |||||||||||||| ||||||||||| ||||  |||| ||||||||| ||||| |||||||||    
T  43516071 gatggagccttgaagaaggaaagagcatagacaggtaatgcagtcaggacagactttagaaggaccaaccga 43516000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 2072263 - 2072475
Alignment:
Q  9 agagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacgga 108  Q
    |||| ||||||||| |||| |||||||| |||| ||||| ||||||||||       |||   ||||||||| ||||||| |||||||||| ||||||||    
T  2072263 agagctccaagcgatccagtaaattttcatgttgtcctcgctccctccccaattttttttgaaaaaaatagagtcaatgaaagagattatatctgacgga 2072362  T
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccg 208  Q
    ||||||||||| ||||| ||||||||| |||  ||||||| |||| | ||||||||||||||||| || || || |||||||| ||||||||||||||||    
T  2072363 gctttgaagaaagaaagagcatagacatgcagagaggtcatgacaaatttgagaagaaccaaccggcctccgaaggagagaaaacgactttgccaccccg 2072462  T
Q  209 ataatctagactt 221  Q
    ||| |||||||||    
T  2072463 atagtctagactt 2072475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 9691138 - 9691355
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    ||||||| |||| ||||||| |  |||| |||||| |||||||||||||| || ||||       |||  ||||||||||||||| || |||||||||||    
T  9691138 aaacaaatagagctccaagcaattcagggaatttttctgttatcctcactaccaccccaaattttttttgtaaaaatagattcaaagatagagattatac 9691237  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    ||||| || |||||||||||||||| ||||| ||||| |  || || | |||||||||||||||||| ||||||||| |||| || ||||| ||||||||    
T  9691238 ctgacagaactttgaagaaggaaagagcataaacaggaagcgaagtaaggacagacttgagaagaactaaccgaccctcaaaggatagaaaacgactttg 9691337  T
Q  201 ccaccccgataatctaga 218  Q
    ||||||||||||||||||    
T  9691338 ccaccccgataatctaga 9691355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 29553161 - 29553042
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||||||||  |||||||||    
T  29553161 tttattaaataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacaggcagagaagtcaagacagctttgagaaga 29553062  T
Q  166 accaaccgacccccaaaaga 185  Q
    ||||| ||||| ||||||||    
T  29553061 accaaacgaccaccaaaaga 29553042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 55299426 - 55299553
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  55299426 gagattatacctgttggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 55299525  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| ||||||||    
T  55299526 accgactattccaacccgacaatctaga 55299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 23872812 - 23872685
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||  |||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  23872812 gagattatacctgctggagctttgaagaaggaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagagaa 23872713  T
Q  191 agcgactttgccaccccgataatctaga 218  Q
    | ||||| | ||| ||||| | ||||||    
T  23872712 accgactattccaacccgacagtctaga 23872685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 8935855 - 8935985
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||| ||||| ||||||||||    
T  8935855 ttattaaataaaaattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacagacagagaggtcaacacagatttgagaagaa 8935954  T
Q  167 ccaaccgacccccaaaagagagaaagcgact 197  Q
    |||| || |  ||||||||||| || |||||    
T  8935955 ccaaacggcaaccaaaagagaggaaacgact 8935985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 19115217 - 19115347
Alignment:
Q  67 ttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaa 166  Q
    |||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||  || ||||||||||  ||||||||||    
T  19115217 ttattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacagacagagaagtcaagacagctttgagaagaa 19115316  T
Q  167 ccaaccgacccccaaaagagagaaagcgact 197  Q
    |||| || || ||||||||||| || |||||    
T  19115317 ccaagcggccaccaaaagagaggaaacgact 19115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 23641951 - 23641799
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  23641951 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 23641852  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  23641851 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 23641799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 20675840 - 20675946
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||  |||||||||||||| ||||| |||||||||||||  |||||||||||||| ||||| |||||||| ||||| |||||||||| ||    
T  20675840 gagattatacctgctggagctttgaagaatgaaagtgcatagacaggcagagaggtcaagacagatttgagtagaaccaagcgaccaccaaaagagaaaa 20675939  T
Q  191 agcgact 197  Q
    | |||||    
T  20675940 accgact 20675946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 19648412 - 19648606
Alignment:
Q  3 acaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacct 102  Q
    ||||| |||||||||| | | ||| || |||||||| | |||||||||||| ||||        |||||||| | |||||||| |  ||| |||||||||    
T  19648412 acaaatagagttccaacctatccaagacattttcctatgatcctcactcccaccccaaaaaaaattattaaataaagattcaagggtagaaattatacct 19648511  T
Q  103 gacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgact 197  Q
    ||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| |||||||||||||| || ||  |||||||||| || |||||    
T  19648512 gacggagctttgaagaaagaaagagcatagacaggtagagaggtcaacacagatttgagaagaaccaaacggccagcaaaagagaggaaacgact 19648606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 1827900 - 1827748
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  |||| ||| ||||| ||||||    
T  1827900 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggaagagcagtcaggacggactttagaaga 1827801  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| || || || |||||||| || ||||||||||| || || ||||||||    
T  1827800 atcaaacggccaccgaaagagaggaaccgactttgccaaccagacaatctaga 1827748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 23647609 - 23647457
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  23647609 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 23647510  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | |||  |||| || ||||| || || ||||||||||| || || ||||||||    
T  23647509 atcaaatgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 23647457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 34976733 - 34976840
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||| ||||| |||||||  ||||||| ||||||||| | ||||||||| || ||     
T  34976733 agattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacaggcagagaggtcaggacagactttaaaagaaccaaacggccg 34976832  T
Q  178 ccaaaaga 185  Q
    ||||||||    
T  34976833 ccaaaaga 34976840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 199
Target Start/End: Original strand, 38296491 - 38296618
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 171  Q
    ||||||||||||||||  | | ||||||||||||||||| |||||||||||||| ||||||||||| |  |||||||| |||||||||||||| || ||     
T  38296491 aaaaatagattcaatggaaaaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaaaacagacttgagaaggactaaa 38296590  T
Q  172 cgacccccaaaagagagaaagcgacttt 199  Q
    || || ||||| || ||||| |||||||    
T  38296591 cggccaccaaatgacagaaaccgacttt 38296618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 47419584 - 47419736
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| |||||||||||||||||| || ||||||||||| |  |  |||| ||| ||||| || |||    
T  47419584 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggagagtgcatagacagggagagcagtcaggaccgactttagtaga 47419683  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  47419684 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 47419736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 19733336 - 19733229
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||| |  |  |||| |||||| |||||||| | ||| |||||     
T  19733336 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggaagggcagtcaggacagatttgagaaggatcaatcgacca 19733237  T
Q  178 ccaaaaga 185  Q
    ||||||||    
T  19733236 ccaaaaga 19733229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 15342639 - 15342776
Alignment:
Q  105 cggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccac 204  Q
    |||||||||||| |||||||||||||||||||||||||  | || |||||| || ||||||||||| ||||| ||| |  ||||||| ||| | |||||     
T  15342639 cggagctttgaaaaaggaaagggcatagacaggcaatgctgacacgacagatttaagaagaaccaaacgaccaccatagaagagaaaacgattgtgccat 15342738  T
Q  205 cccgataatctagactttatagtcttcaacacaggttc 242  Q
    ||||  |||||||| || || || ||||| ||||||||    
T  15342739 cccgtcaatctagatttaatggtattcaaaacaggttc 15342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 26694720 - 26694833
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||  |||||||||||||| |||||||||||||||||||  || ||||  || || ||||| |||| ||| || ||     
T  26694720 agattcaatggaagagattatacctgttggagctttgaagaaagaaagggcatagacaggcagagatgtcagaactgatttgaggagaatcaagcggcca 26694819  T
Q  178 ccaaaagagagaaa 191  Q
    ||||||||||||||    
T  26694820 ccaaaagagagaaa 26694833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 19756047 - 19756199
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||||| ||| |||||| |||||||| ||||||||||| |  |  |||| ||| ||||| || |||    
T  19756047 tttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtaga 19756146  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  19756147 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 19756199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 19783759 - 19783607
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||||| ||| |||||| |||||||| ||||||||||| |  |  |||| ||| ||||| || |||    
T  19783759 tttattaaacaaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggtagcgcagtcaggacggactttagtaga 19783660  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  19783659 atcaaacgaccaccgaaagaaaggaaccgactttgccaaccagacaatctaga 19783607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 42779054 - 42779122
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||  |||||||| ||||||||    
T  42779054 agagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcaaaacagactt 42779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 10562660 - 10562581
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||  |||||||  |||||||| | ||||||||    
T  10562660 agagattatacctgatggagctttgaagaaggaaagcgcatagacagacagagaggtcagaacagactttaaaagaacca 10562581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 19308940 - 19308837
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||||||||||  ||||||||||||||  |||||| |||| || |||||||| |||||||||| ||| | || ||||||||| ||||||| ||| |    
T  19308940 aaaatagattcaatggaagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagacttaagaagaatcaagc 19308841  T
Q  173 gacc 176  Q
    ||||    
T  19308840 gacc 19308837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 48312886 - 48312945
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  48312886 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 48312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 54482508 - 54482449
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  54482508 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 54482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 42952879 - 42952817
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  42952879 agattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacaggcaa 42952817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 55464200 - 55464091
Alignment:
Q  107 gagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccc 206  Q
    ||||||||||||||||||| ||||||||| |||  || ||||| |||||||| ||||| | ||| ||||| |||||||| | ||||||||| | ||||||    
T  55464200 gagctttgaagaaggaaagagcatagacatgcagagaagtcaatacagacttaagaaggatcaaacgaccaccaaaagaaaaaaagcgactctcccaccc 55464101  T
Q  207 cgataatcta 216  Q
     || ||||||    
T  55464100 agacaatcta 55464091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 2365810 - 2365937
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    |||||||||||||||| ||| |||||| ||||| ||  |||||||||| || || |||||||||||||| || | |||||| ||||| |||||||| |||    
T  2365810 agagattatacctgacagag-tttgaaaaaggagagaacatagacaggtaaggaagtcaagacagacttaaggataaccaatcgaccaccaaaagacaga 2365908  T
Q  190 aagcgactttgccaccccgataatctaga 218  Q
    || ||||| | ||| || || ||||||||    
T  2365909 aaacgactcttccaaccagacaatctaga 2365937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 15741000 - 15741059
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  15741000 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaag 15741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 40688867 - 40688998
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagc-tttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaac 171  Q
    ||||||||||  |||  ||||||| ||||||  ||||| ||||||||||||||| ||||||||||  |  |  |||||||||||||| | ||||| |||     
T  40688867 aaaatagattttatggaagagattgtacctgctggagcctttgaagaaggaaagagcatagacagatagcgcagtcaagacagactttaaaagaatcaag 40688966  T
Q  172 cgacccccaaaagagagaaagcgactttgcca 203  Q
    ||||| |||||||| ||||| |||||||||||    
T  40688967 cgacctccaaaagaaagaaaccgactttgcca 40688998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 3129305 - 3129211
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaa 191  Q
    |||||||| |||| ||||||||| |||||||||||||||||||  || ||||||||||| || | ||| ||||| ||||| ||||| || |||||    
T  3129305 atacctgatggagttttgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaacgacctccaaaggaaagaaa 3129211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 7662665 - 7662579
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |  || |||||||||||    
T  7662665 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 7662579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 19162522 - 19162392
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||| || |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |  | |||||||||| |||| | ||||| ||| |    
T  19162522 aaaatagaatctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggtcaagacatactttaaaagaatcaagc 19162423  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| ||||| || ||||| | |||||||||    
T  19162422 gacctccaaaggaaagaaacctactttgcca 19162392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 20396386 - 20396432
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  20396386 agagattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 19837922 - 19838007
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    |||||||||||||||  ||||||||||||||  |||||| |||| || |||||||| |||||||||| ||| | || |||||||||    
T  19837922 aaaatagattcaatggtagagattatacctgcgggagctctgaaaaaagaaagggcgtagacaggcagtgaagacaggacagactt 19838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 29133683 - 29133744
Alignment:
Q  106 ggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    |||||||||||||||||||| ||||||||||  |  ||||||||||||||||| ||||||||    
T  29133683 ggagctttgaagaaggaaagagcatagacagagagagaggtcaagacagacttaagaagaac 29133744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 29328141 - 29328041
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||||||||||||| |   ||| ||||||| ||  ||||| ||||||||||||||  |||||||||| |  |||||||||||| |||| ||||||    
T  29328141 tttattaaaaatagattcagtagaagaaattatacttgttggagccttgaagaaggaaagaccatagacaggtagagaggtcaagacaaactttagaaga 29328042  T
Q  166 a 166  Q
    |    
T  29328041 a 29328041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 55725055 - 55724996
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  |||||||||||| |||||||||||||| ||||||||  ||||||||||    
T  55725055 agattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacatagacagg 55724996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 7447505 - 7447660
Alignment:
Q  30 aattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggca 129  Q
    |||||| ||||||||||||||||| ||||        ||| ||| ||||||||  |||  ||||||||||| ||  |||||| |||| |||||||||||     
T  7447505 aatttttctgttatcctcactcccaccccaaaaaaaattaataagaatagatttgatggaagagattatacttgcgggagctctgaaaaaggaaagggcg 7447604  T
Q  130 tagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||| ||| ||| | || |||||| |||||||| | ||| || |||||||||||    
T  7447605 tagacaagcagtgaagacaggacagatttgagaaggatcaaacggcccccaaaaga 7447660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 17826117 - 17826062
Alignment:
Q  71 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagg 126  Q
    |||||||||| ||||||| ||| || |||||||| |||||||||||||| ||||||    
T  17826117 taaaaatagagtcaatgatagaaatgatacctgagggagctttgaagaaagaaagg 17826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 20509300 - 20509258
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||||||||||||| |||||||| ||||||||||| |||||||    
T  20509300 atacctgacggagccttgaagaaagaaagggcataaacaggca 20509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 45636364 - 45636290
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    |||||||||||||||||||||    || || |||||||||||||||||||| || |||||  |||| ||||||||    
T  45636364 tttattaaaaatagattcaatagaggaaatgatacctgacggagctttgaaaaaagaaagaacataaacaggcaa 45636290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 14538269 - 14538374
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||||||||||  | ||||||||||||  |||||| |||| || |||||||| ||||||| || ||| | || ||| || || ||||||| ||| |    
T  14538269 aaaatagattcaatggaatagattatacctgcgggagctctgaaaaaagaaagggcgtagacagacagtgaagacatgacggatttaagaagaatcaagc 14538368  T
Q  173 gacccc 178  Q
    ||||||    
T  14538369 gacccc 14538374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 53486265 - 53486197
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagactt 158  Q
    ||||||||||| ||| |||||||||||||||||||   |||||||||| |  |||||||  ||||||||    
T  53486265 agagattatacttgatggagctttgaagaaggaaaacacatagacaggaagagaggtcagaacagactt 53486197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 34034 - 33930
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  34034 aaacaaacagagttccaagcgacctaggaaattttcctgttatcctcactccctccccaaaaaaatttattaaaaatagattcaatgacagagattatac 33935  T
Q  101 ctgac 105  Q
    |||||    
T  33934 ctgac 33930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33583852 - 33583627
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatac 100  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||| |||||             |||||||| |||||||  || |||||||||||    
T  33583852 aaacaaacagagctccaagcaatccaggaaattttcctgttatcctcacaccctctaaaaaaaaaaaaattaaaaacagattcatgga-agagattatac 33583754  T
Q  101 ctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttg 200  Q
    |||||||||||||||| |||||||| ||||||||||| |  ||||||| |||| ||||||||| ||| ||||| |||||  | || ||||| ||||||||    
T  33583753 ctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaggacaaacttgagaaaaacgaaccggcccccggatgatagaaatcgactttg 33583654  T
Q  201 ccaccccgataatctagactttatagt 227  Q
    ||||||||| |||||||| || |||||    
T  33583653 ccaccccgacaatctagatttaatagt 33583627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 11197066 - 11197271
Alignment:
Q  1 aaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactccctccccnnnnnnntt-tattaaaaatagattcaatgacagagattata 99  Q
    |||||||||||| ||||||| | | |||||||||||||||||||||||||||||||||        | ||||||| ||||||||||||| ||||||||||    
T  11197066 aaacaaacagagctccaagcaatctaggaaattttcctgttatcctcactccctccccaaaaaaaatgtattaaacatagattcaatgatagagattata 11197165  T
Q  100 cctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgacttt 199  Q
    ||||||||||| |||||||| ||||| ||||| |||   ||   ||||| ||||||||| ||||| ||||||||||| ||| | || ||||| || ||||    
T  11197166 cctgacggagccttgaagaatgaaagagcataaacaaataacacggtcaggacagacttcagaaggaccaaccgacctccatatgaaagaaaacggcttt 11197265  T
Q  200 gccacc 205  Q
    ||||||    
T  11197266 gccacc 11197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 13551387 - 13551493
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaa 190  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||| ||||| |||||||| ||||    
T  13551387 gagattatacctgatggagctttgaagaaggaaagtgcatagacaggcaaagaggtcaggacagatttgagaagaaccaagcgaccaccaaaagatagaa 13551486  T
Q  191 agcgact 197  Q
    | |||||    
T  13551487 accgact 13551493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 6824151 - 6824344
Alignment:
Q  26 aggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaag 125  Q
    |||||||||||||||||||||||||||||||||       |||  |||||||| | ||||||| ||| || |||| ||||||||||||||||||||||||    
T  6824151 aggaaattttcctgttatcctcactccctccccaatttttttttgtaaaaataaaatcaatgagagaaataatacttgacggagctttgaagaaggaaag 6824250  T
Q  126 ggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccaccccgataatctagactt 221  Q
     |||||||||||  | | ||||| |||||| || |||||||| || || || || ||||| | ||||||| |||||||||||| || |||||||||    
T  6824251 tgcatagacagg--aagcggtcaggacagatttaagaagaactaaacggcctccgaaagataaaaagcgaatttgccaccccgttagtctagactt 6824344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 15018459 - 15018605
Alignment:
Q  68 tattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    ||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||   || ||||||||||  ||||||| |||    
T  15018459 tattaaataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacaggccgagaagtcaagacagctttgagaacaac 15018558  T
Q  168 caaccgacccccaaaagagagaaagcgactttgccaccccgataatc 214  Q
    ||| |  || ||||||||||| || ||||| | ||| ||||| ||||    
T  15018559 caagcagccaccaaaagagaggaaacgactattccaacccgacaatc 15018605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 26146995 - 26147101
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||||    
T  26146995 tttagtaaaaatagagtcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaga 26147094  T
Q  166 accaacc 172  Q
    || ||||    
T  26147095 actaacc 26147101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 25380730 - 25380622
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacc-cccaaaagagag 188  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||| |||||   | ||||||||||| |||||||||||||| || || || |||||||||    
T  25380730 agagattatacctgatggagctttgaagaaagaaagtgcatagagaggcagataagtcaagacagatttgagaagaaccaagcggccgccaaaaagagag 25380631  T
Q  189 aaagcgact 197  Q
    ||| |||||    
T  25380630 aaaacgact 25380622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 34357588 - 34357707
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||| ||||||||  ||| |||||| || ||||||| |||||||||||||| ||||||||||| ||  ||||||| | |||||||||||||    
T  34357588 tttactaaaaataaattcaatggaagaaattatatctaacggagccttgaagaaggaaagagcatagacaggtaaaaaggtcaaaagagacttgagaaga 34357687  T
Q  166 accaaccgacccccaaaaga 185  Q
    |  || ||||| ||||||||    
T  34357688 attaaacgaccaccaaaaga 34357707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 13416473 - 13416603
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    ||||||||||| |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||| | |  | |||||||| |||||| ||||||| ||| |    
T  13416473 aaaatagattctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacatgtagcgcggtcaagatagactttagaagaatcaagc 13416572  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| ||||| || ||||| |||||||||||    
T  13416573 gacctccaaatgaaagaaaccgactttgcca 13416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 191
Target Start/End: Original strand, 35488630 - 35488743
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||| |||||||| ||||||||||  |||||||||||||| |||||||  || || |||||||| | ||| || ||     
T  35488630 agattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacaggcaaagaggtcagaactgatttgagaaggatcaagcggcca 35488729  T
Q  178 ccaaaagagagaaa 191  Q
    || |||||||||||    
T  35488730 ccgaaagagagaaa 35488743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 2207175 - 2207045
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||| ||||||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |  | || |||||| ||||| | ||||| ||| |    
T  2207175 aaaatagaatcaatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcgcggacaagacggactttacaagaatcaaac 2207076  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| ||||| || ||||| |||||||||||    
T  2207075 gacctccaaaggaaagaaaccgactttgcca 2207045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 43311039 - 43311145
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||| | || |||||||| ||||||    
T  43311039 tttagtaaaaatagagtcaagggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagagataaaaacagactttagaaga 43311138  T
Q  166 accaacc 172  Q
    || ||||    
T  43311139 actaacc 43311145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 22724786 - 22724677
Alignment:
Q  79 gattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccc 178  Q
    |||||||||  ||||||||||||| ||| |||||| ||||||||||| |||||||||| ||  ||||||| ||| || || ||||||||||| |  || |    
T  22724786 gattcaatggtagagattatacctaacgaagctttaaagaaggaaagagcatagacagacagagaggtcatgactgatttaagaagaaccaatcagccac 22724687  T
Q  179 caaaagagag 188  Q
    ||||||||||    
T  22724686 caaaagagag 22724677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 28399898 - 28399758
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||| |||||||||||||  || ||||  || || || || |||| ||| || ||     
T  28399898 agattcaatggaagagattatacctgctggagctttgaagaaagaaagagcatagacaggcagagatgtcagaactgattttaggagaatcaaacgtcca 28399799  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    |||||||||||||| | ||| ||||| ||||| | ||||||    
T  28399798 ccaaaagagagaaacctactatgccaacccgacagtctaga 28399758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 12646342 - 12646401
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||| |||||||||||    
T  12646342 agattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacagg 12646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 225
Target Start/End: Complemental strand, 33515529 - 33515394
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||| | ||  |||| ||| || ||| |||||| ||  ||||  |||||||| ||     
T  33515529 agagattgtacctgacggagctttgaaaaaggaaagtgcatagacaggaagtgcagtcaggacggatttgcgaagaatcagacgactaccaaaagaaagg 33515430  T
Q  190 aagcgactttgccaccccgataatctagactttata 225  Q
    || ||||| ||||| || || |||||||| ||||||    
T  33515429 aaccgactatgccaaccagacaatctagattttata 33515394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 3153172 - 3153106
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    |||||||||||||||  ||||||||||||||  ||||||||||| || |||||||| ||||||||||    
T  3153172 aaaatagattcaatggaagagattatacctgcgggagctttgaaaaaagaaagggcgtagacaggca 3153106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 4222257 - 4222175
Alignment:
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaa 191  Q
    ||||||||||||||||| ||||||||| | |  |||| || ||||||||||||||||||||  ||||||||||| || |||||    
T  4222257 gctttgaagaaggaaagagcatagacaagaatggaggacatgacagacttgagaagaaccagacgacccccaaatgaaagaaa 4222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 8065609 - 8065551
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacag 136  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||  ||||||||||    
T  8065609 agattcaatggaagagattatacctgatggagctttgaagaaggaaaaagcatagacag 8065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 45422303 - 45422389
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |  || |||||||||||    
T  45422303 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 45422389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 10689346 - 10689419
Alignment:
Q  94 attatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    ||||||| ||||||| | |||||||||||||| ||||||||||| |  |||||||||||| |||| ||||||||    
T  10689346 attatacatgacggatccttgaagaaggaaagagcatagacaggtagagaggtcaagacatactttagaagaac 10689419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 20946918 - 20946830
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || | || |||||| || || | |||||| |||||||| |||||    
T  20946918 atacctgacggagctttgaaaaaagaaagggcataaacaggcaacgacgacaggacagatttcagtaaaaccaagcgacccccgaaaga 20946830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 28253521 - 28253640
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||||||| | ||||||| |||||||| ||||||||| | |  |  |||| ||| ||||||||||| |  |  |||||     
T  28253521 agattcaatggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagacatgaagagcagtcaggacggacttgagaaggattaggcgacca 28253620  T
Q  178 ccaaaagagagaaagcgact 197  Q
    |||||||||||||| |||||    
T  28253621 ccaaaagagagaaaccgact 28253640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 43722380 - 43722321
Alignment:
Q  72 aaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcata 131  Q
    ||||||||| ||||||  ||| ||||||||||||||||| |||||||||||||| |||||    
T  43722380 aaaaatagaatcaatggaagaaattatacctgacggagccttgaagaaggaaagagcata 43722321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 6724985 - 6724855
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||||||| || |||  ||||||| ||||||  ||||| |||||||||||||| ||||||||||| |    | |||||||| |||| | ||||| ||| |    
T  6724985 aaaatagaatctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggtagcacgatcaagacatactttaaaagaatcaaac 6724886  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |||| ||||| || ||||| |||||||||||    
T  6724885 gacctccaaatgaaagaaaccgactttgcca 6724855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 11233837 - 11233775
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaa 140  Q
    ||||||||||  ||||| ||||||||| |||||||| ||||||||||| ||||| ||||||||    
T  11233837 agattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacaggcaa 11233775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 44028566 - 44028436
Alignment:
Q  73 aaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaacc 172  Q
    |||| |||||||||   ||||||||||| ||| ||||| |||||||||||||| ||||||||||  |  | ||||||||||||||| || ||||  || |    
T  44028566 aaaagagattcaatagaagagattatacatgatggagccttgaagaaggaaagagcatagacagatagagcggtcaagacagactttaggagaattaaac 44028467  T
Q  173 gacccccaaaagagagaaagcgactttgcca 203  Q
    |  | || || |||||||| |||||||||||    
T  44028466 ggtcaccgaaggagagaaaccgactttgcca 44028436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 2282605 - 2282665
Alignment:
Q  109 gctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||||||||||||| ||||| |  ||||||| ||||||||| |||| |||||    
T  2282605 gctttgaagaaggaaagggcatacacaggaagagaggtcatgacagacttaagaataacca 2282665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 10289395 - 10289307
Alignment:
Q  97 atacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaaga 185  Q
    |||| ||| |||||||||||||||||||| ||||||||||| |  ||||||| ||| ||||| || ||||| |  ||||| ||||||||    
T  10289395 atacttgagggagctttgaagaaggaaagagcatagacaggaagcgaggtcaggaccgacttcaggagaacaagacgaccaccaaaaga 10289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 14440548 - 14440595
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||||    
T  14440548 agagattatacctgacggagctttaaaaaaggaaagtgcataaacagg 14440595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 12605803 - 12605693
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||||||||||||||||||||    || |  || |||| |||||||||||| || ||||||||||| ||||||||  | | || ||||||||| || |||    
T  12605803 tttattaaaaatagattcaatagaggaaacgatgcctggcggagctttgaaaaatgaaagggcataaacaggcaacaatgacatgacagactttagcaga 12605704  T
Q  166 accaaccgacc 176  Q
    ||||| |||||    
T  12605703 accaaacgacc 12605693  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 18669552 - 18669506
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  18669552 gagattatacctgagagagctttgaagaaagaaagggcgtagacagg 18669506  T

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Target: scaffold0048 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 63701 - 63521
Alignment:
Q  24 ccaggaaattttcctgttatcctcactccctccccnnnnnnntttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaa 123  Q
    |||||||||||||||||||||||||||||||||||        || | ||||||||||||||||  ||||||||||||||| | ||| ||||||||||||    
T  63701 ccaggaaattttcctgttatcctcactccctccccaaaaaaaatt-taaaaaatagattcaatggaagagattatacctgaagaagccttgaagaaggaa 63603  T
Q  124 agggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaagcgactttgccacc 205  Q
    || ||||| ||||| |   ||||||||||||| || ||||| |||||||  ||||||||||| || |||||||| |||||||    
T  63602 agagcataaacaggaagcaaggtcaagacagattttagaaggaccaaccagcccccaaaagataggaagcgactctgccacc 63521  T

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Target: scaffold0189 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 6873 - 7022
Alignment:
Q  68 tattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaac 167  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||| ||||||||||| |  |||||||||||| | ||||||||||     
T  6873 tattaaaaatagattcaatgagagaaatgatacctgacggagctttgaaaaaggaaagagcatagacaggaagcgaggtcaagacatatttgagaagaat 6972  T
Q  168 caaccgacccccaaaagagagaaagcgactttgccaccccgataatctag 217  Q
     || || ||||| || || |  |||||||||||||||||||  |||||||    
T  6973 taaacggcccccgaaggataagaagcgactttgccaccccgccaatctag 7022  T

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Target: scaffold0034 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 105203 - 105051
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    ||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||| |  |  |||| ||||||||| ||||||    
T  105203 tttattaaacaaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggtagagcagtcaggacagactttagaaga 105104  T
Q  166 accaaccgacccccaaaagagagaaagcgactttgccaccccgataatctaga 218  Q
    | ||| ||||| || ||||| || || ||||||||||| || || ||||||||    
T  105103 atcaaacgaccaccgaaagataggaaccgactttgccaaccagacaatctaga 105051  T

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Target: scaffold0016 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 28554 - 28660
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaaga 165  Q
    |||| |||||||||| |||| |  ||| ||||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||||    
T  28554 tttagtaaaaatagagtcaacggaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggtagagaggtcaagacagactttagaaga 28653  T
Q  166 accaacc 172  Q
    || ||||    
T  28654 actaacc 28660  T

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Target: scaffold0026 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 67872 - 68019
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgaccc 177  Q
    ||||||||||  ||||||||||||| || ||||||||||||||||||   |||||||| ||||||| ||||||||  | ||  |||||  | | ||||||    
T  67872 agattcaatggaagagattataccttacagagctttgaagaaggaaaaatcatagacatgcaatgatgtcaagacgtattttcgaagagtctagcgaccc 67971  T
Q  178 ccaaaagagagaaagcgactttgccaccccgataatctagactttata 225  Q
    |||||||| ||||| ||||||| |||| |||| | |||||||||||||    
T  67972 ccaaaagaaagaaaacgacttttccacgccgacagtctagactttata 68019  T

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Target: scaffold0179 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 8338 - 8415
Alignment:
Q  92 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||| ||||||||| | ||||||||    
T  8338 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtcaggacagactttaaaagaacca 8415  T

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Target: scaffold0179; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 13272 - 13349
Alignment:
Q  92 agattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaacca 169  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||  ||||| | |||| |||| | ||||||||    
T  13272 agattatacctgatggagctttgaagaaggaaagcgcatagacaggcagagaggtaaggacaaactttaaaagaacca 13349  T

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Target: scaffold0472 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 4032 - 4103
Alignment:
Q  66 tttattaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4032 tttattaaacaaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 4103  T

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Target: scaffold0131 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 3878 - 3819
Alignment:
Q  96 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    ||||||||| |||||||||||||| |||||||||||||||||||  || |||||||||||    
T  3878 tatacctgatggagctttgaagaaagaaagggcatagacaggcagagaagtcaagacaga 3819  T

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Target: scaffold0418 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 8387 - 8473
Alignment:
Q  69 attaaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacaga 155  Q
    |||||| | |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||||||| |  || |||||||||||    
T  8387 attaaataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggtagagaagtcaagacaga 8473  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 182919 - 182977
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtca 148  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||  |||||||    
T  182919 agagattatacctaatggagctttgaagaaggaaagtgcatagacaggcagagaggtca 182977  T

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Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 55450 - 55551
Alignment:
Q  71 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 170  Q
    |||||||||| |||| |  ||| ||||||||| | | ||| |||||||||||||| ||||||||||| |  |||||||||| |||||| |||||||| ||    
T  55450 taaaaatagagtcaagggaagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaa 55549  T
Q  171 cc 172  Q
    ||    
T  55550 cc 55551  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 143183 - 143082
Alignment:
Q  71 taaaaatagattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaa 170  Q
    |||||||||| |||| |  ||| ||||||||| | | ||| |||||||||||||| ||||||||||| |  |||||||||| |||||| |||||||| ||    
T  143183 taaaaatagagtcaagggaagaaattatacctaatgaagccttgaagaaggaaagagcatagacaggtagagaggtcaagatagactttagaagaactaa 143084  T
Q  171 cc 172  Q
    ||    
T  143083 cc 143082  T

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Target: scaffold1350 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 348 - 476
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagaga 189  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||| |  |  || | ||| || |||||||||| ||  ||||| ||||| |||||     
T  348 agagattatacttgacggagctttgaaaaaggaaagagcatagacaggaagcgcagttaggacggatttgagaagaatcaggcgaccaccaaaggagagg 447  T
Q  190 aagcgactttgccaccccgataatctaga 218  Q
    || ||||| ||||| || || ||||||||    
T  448 aaccgactatgccaaccagaaaatctaga 476  T

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Target: scaffold0112 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 15009 - 14950
Alignment:
Q  78 agattcaatgacagagattatacctgacggagctttgaagaaggaaagggcatagacagg 137  Q
    ||||||||||  ||||||||||||||  ||| |||||||||||||||| |||||||||||    
T  15009 agattcaatggaagagattatacctggtggatctttgaagaaggaaagagcatagacagg 14950  T

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Target: scaffold0094 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 26105 - 26153
Alignment:
Q  91 gagattatacctgacggagctttgaagaaggaaagggcatagacaggca 139  Q
    ||||| |||||||||||||| |||||||| ||||||||||| |||||||    
T  26105 gagatgatacctgacggagccttgaagaaagaaagggcataaacaggca 26153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 1136 - 1093
Alignment:
Q  90 agagattatacctgacggagctttgaagaaggaaagggcataga 133  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||    
T  1136 agagattatacctgatggagccttgaagaaggaaagtgcataga 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 134175 - 134080
Alignment:
Q  96 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaa 191  Q
    ||||||||| || ||  ||||||| |||||||||||||||||||  || ||||||||||| || | ||| |||||||| || ||||| || |||||    
T  134175 tatacctgatggggcactgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccgtccaccaaaggaaagaaa 134080  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 312003 - 311908
Alignment:
Q  96 tatacctgacggagctttgaagaaggaaagggcatagacaggcaatgaggtcaagacagacttgagaagaaccaaccgacccccaaaagagagaaa 191  Q
    ||||||||| || ||  ||||||| |||||||||||||||||||  || ||||||||||| || | ||| |||||||| || ||||| || |||||    
T  312003 tatacctgatggggcactgaagaaagaaagggcatagacaggcagagaagtcaagacagattttaaaagtaccaaccgtccaccaaaggaaagaaa 311908  T

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