View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12449_low_14 (Length: 348)

Name: NF12449_low_14
Description: NF12449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12449_low_14
NF12449_low_14
[»] chr1 (53 HSPs)
chr1 (18-221)||(18534139-18534343)
chr1 (256-339)||(8077638-8077721)
chr1 (204-338)||(18533848-18533998)
chr1 (257-339)||(24674385-24674467)
chr1 (259-339)||(4621360-4621440)
chr1 (259-339)||(7197369-7197449)
chr1 (259-339)||(15059525-15059605)
chr1 (264-339)||(46113525-46113600)
chr1 (257-339)||(27454989-27455071)
chr1 (255-339)||(18646843-18646927)
chr1 (259-339)||(30677170-30677250)
chr1 (259-339)||(34778336-34778416)
chr1 (259-338)||(29057461-29057540)
chr1 (257-339)||(7766850-7766932)
chr1 (258-339)||(24122016-24122097)
chr1 (259-339)||(46607804-46607884)
chr1 (284-339)||(9500478-9500533)
chr1 (258-333)||(21726722-21726797)
chr1 (265-332)||(32930749-32930816)
chr1 (257-339)||(7946836-7946918)
chr1 (259-339)||(168195-168275)
chr1 (259-339)||(20487313-20487393)
chr1 (256-339)||(23734107-23734190)
chr1 (256-339)||(23741299-23741382)
chr1 (276-333)||(17935780-17935837)
chr1 (282-339)||(33905633-33905690)
chr1 (263-339)||(2272342-2272418)
chr1 (259-339)||(14258550-14258630)
chr1 (278-333)||(7578422-7578477)
chr1 (257-338)||(1138571-1138652)
chr1 (260-332)||(24216973-24217045)
chr1 (259-339)||(23232388-23232468)
chr1 (287-339)||(36156011-36156063)
chr1 (283-339)||(45859166-45859222)
chr1 (259-314)||(6776139-6776193)
chr1 (259-333)||(32729539-32729613)
chr1 (278-332)||(8779866-8779920)
chr1 (280-333)||(37351590-37351643)
chr1 (261-333)||(1818730-1818802)
chr1 (279-339)||(19034509-19034569)
chr1 (260-303)||(1486415-1486458)
chr1 (259-310)||(47091684-47091735)
chr1 (259-332)||(1378892-1378965)
chr1 (263-339)||(1378743-1378819)
chr1 (259-338)||(25237113-25237192)
chr1 (258-301)||(31162743-31162786)
chr1 (264-315)||(40146028-40146079)
chr1 (258-332)||(809215-809289)
chr1 (255-309)||(40802220-40802274)
chr1 (282-339)||(16539625-16539682)
chr1 (262-338)||(52135127-52135203)
chr1 (258-298)||(2537697-2537737)
chr1 (258-338)||(25496612-25496692)
[»] chr2 (39 HSPs)
chr2 (257-339)||(41313984-41314066)
chr2 (258-341)||(30466951-30467034)
chr2 (263-339)||(17324764-17324840)
chr2 (259-339)||(18976548-18976628)
chr2 (259-339)||(33827696-33827776)
chr2 (259-333)||(44946182-44946256)
chr2 (257-333)||(11941339-11941415)
chr2 (263-339)||(44976277-44976353)
chr2 (264-339)||(8258896-8258971)
chr2 (276-339)||(10582113-10582176)
chr2 (258-339)||(4852551-4852632)
chr2 (282-339)||(43374448-43374505)
chr2 (278-333)||(27290601-27290656)
chr2 (262-332)||(4567567-4567637)
chr2 (259-333)||(15037953-15038027)
chr2 (258-339)||(24195997-24196078)
chr2 (260-339)||(8192474-8192553)
chr2 (259-339)||(25293160-25293240)
chr2 (258-333)||(6714410-6714485)
chr2 (256-333)||(32526214-32526291)
chr2 (259-332)||(36390698-36390769)
chr2 (259-311)||(27269501-27269553)
chr2 (259-339)||(32845085-32845165)
chr2 (281-333)||(34516537-34516589)
chr2 (264-339)||(41329842-41329917)
chr2 (282-339)||(5394034-5394091)
chr2 (282-339)||(36242435-36242492)
chr2 (282-338)||(1191530-1191586)
chr2 (259-306)||(10324891-10324938)
chr2 (296-339)||(35171831-35171874)
chr2 (263-329)||(918833-918898)
chr2 (279-333)||(19849847-19849901)
chr2 (294-339)||(5608157-5608202)
chr2 (259-339)||(28194256-28194337)
chr2 (261-333)||(19054021-19054093)
chr2 (278-333)||(40997479-40997534)
chr2 (269-338)||(19605969-19606038)
chr2 (281-331)||(44610090-44610140)
chr2 (258-311)||(1845808-1845861)
[»] chr8 (35 HSPs)
chr8 (258-339)||(4718642-4718723)
chr8 (259-339)||(34237778-34237858)
chr8 (256-339)||(28193469-28193552)
chr8 (259-333)||(18532105-18532179)
chr8 (259-339)||(3734746-3734826)
chr8 (255-339)||(19471603-19471687)
chr8 (255-339)||(19542527-19542611)
chr8 (255-339)||(19590085-19590169)
chr8 (259-339)||(39349254-39349334)
chr8 (262-333)||(27746464-27746535)
chr8 (282-339)||(4698846-4698903)
chr8 (262-339)||(15259529-15259606)
chr8 (259-339)||(2618184-2618264)
chr8 (258-338)||(42643242-42643322)
chr8 (258-333)||(20305905-20305980)
chr8 (258-333)||(21092538-21092613)
chr8 (262-331)||(8042655-8042724)
chr8 (282-339)||(14632975-14633032)
chr8 (259-339)||(32879277-32879357)
chr8 (278-333)||(21603247-21603302)
chr8 (260-339)||(42328004-42328082)
chr8 (264-338)||(264523-264597)
chr8 (264-338)||(651324-651398)
chr8 (264-338)||(837059-837133)
chr8 (284-338)||(20469940-20469994)
chr8 (259-333)||(2166695-2166771)
chr8 (259-332)||(7558073-7558146)
chr8 (259-332)||(24018380-24018453)
chr8 (259-333)||(28088284-28088358)
chr8 (259-333)||(26168977-26169051)
chr8 (284-339)||(8765649-8765704)
chr8 (261-311)||(28964033-28964083)
chr8 (278-311)||(9047429-9047462)
chr8 (262-311)||(36848900-36848949)
chr8 (262-333)||(34694705-34694776)
[»] chr5 (52 HSPs)
chr5 (258-339)||(13038577-13038658)
chr5 (257-339)||(1827653-1827735)
chr5 (257-339)||(11926625-11926707)
chr5 (259-340)||(22392695-22392776)
chr5 (256-339)||(27498854-27498937)
chr5 (258-339)||(13108572-13108653)
chr5 (258-339)||(15641228-15641309)
chr5 (259-332)||(25586926-25586999)
chr5 (259-339)||(30485822-30485902)
chr5 (258-333)||(32059569-32059644)
chr5 (262-339)||(8484784-8484861)
chr5 (262-339)||(38631084-38631161)
chr5 (255-339)||(33709624-33709707)
chr5 (259-339)||(34310136-34310216)
chr5 (260-339)||(36954813-36954892)
chr5 (259-333)||(34049816-34049890)
chr5 (263-332)||(15971252-15971321)
chr5 (259-339)||(15931053-15931133)
chr5 (259-339)||(38684202-38684282)
chr5 (259-338)||(7085750-7085829)
chr5 (259-333)||(31288075-31288149)
chr5 (259-339)||(37495044-37495121)
chr5 (284-333)||(18207226-18207275)
chr5 (259-332)||(23270652-23270725)
chr5 (262-333)||(4603774-4603845)
chr5 (259-316)||(3715055-3715112)
chr5 (282-331)||(19456340-19456389)
chr5 (262-323)||(25750750-25750811)
chr5 (262-327)||(27487690-27487755)
chr5 (259-339)||(5067295-5067375)
chr5 (258-338)||(21236486-21236566)
chr5 (282-333)||(12398577-12398628)
chr5 (267-333)||(10869694-10869760)
chr5 (259-332)||(12317280-12317353)
chr5 (255-332)||(42193475-42193552)
chr5 (269-332)||(6014410-6014473)
chr5 (261-339)||(19145534-19145612)
chr5 (257-312)||(21042675-21042730)
chr5 (258-332)||(11465037-11465111)
chr5 (259-333)||(37397707-37397781)
chr5 (282-339)||(7151346-7151403)
chr5 (259-311)||(12647734-12647786)
chr5 (264-335)||(2499305-2499376)
chr5 (257-332)||(16616111-16616186)
chr5 (262-338)||(8780475-8780551)
chr5 (278-339)||(10399786-10399847)
chr5 (282-339)||(17015536-17015593)
chr5 (258-311)||(33025473-33025526)
chr5 (260-336)||(40330628-40330704)
chr5 (259-311)||(9585664-9585716)
chr5 (259-333)||(15485420-15485495)
chr5 (259-303)||(19230469-19230513)
[»] chr4 (45 HSPs)
chr4 (259-339)||(33992620-33992700)
chr4 (259-339)||(5609325-5609405)
chr4 (259-339)||(40058975-40059055)
chr4 (256-339)||(19660655-19660738)
chr4 (259-332)||(46714386-46714459)
chr4 (259-339)||(25852208-25852288)
chr4 (259-339)||(27528918-27528998)
chr4 (259-339)||(32986191-32986271)
chr4 (259-339)||(34844881-34844961)
chr4 (279-339)||(49287872-49287932)
chr4 (259-339)||(52983613-52983693)
chr4 (260-339)||(13873418-13873497)
chr4 (259-333)||(1985830-1985904)
chr4 (258-339)||(33696402-33696483)
chr4 (259-339)||(22625193-22625273)
chr4 (263-338)||(43719189-43719264)
chr4 (259-338)||(54127466-54127545)
chr4 (257-339)||(18875639-18875721)
chr4 (269-333)||(35229172-35229236)
chr4 (257-339)||(20566341-20566424)
chr4 (259-339)||(35674864-35674944)
chr4 (257-333)||(36131639-36131715)
chr4 (263-339)||(51535611-51535687)
chr4 (278-339)||(2351026-2351087)
chr4 (263-339)||(45787827-45787902)
chr4 (282-333)||(7392092-7392143)
chr4 (264-339)||(32942369-32942444)
chr4 (289-339)||(12500181-12500231)
chr4 (283-333)||(20078113-20078163)
chr4 (259-317)||(34722164-34722222)
chr4 (265-321)||(55961883-55961939)
chr4 (263-338)||(42245744-42245819)
chr4 (258-311)||(41621747-41621800)
chr4 (279-339)||(7093390-7093450)
chr4 (264-339)||(9646339-9646414)
chr4 (284-335)||(30938217-30938269)
chr4 (263-339)||(34835527-34835603)
chr4 (256-339)||(44343504-44343588)
chr4 (278-333)||(12710192-12710247)
chr4 (257-311)||(40307534-40307588)
chr4 (262-339)||(13584377-13584454)
chr4 (282-339)||(30879288-30879345)
chr4 (282-311)||(39288883-39288912)
chr4 (283-339)||(20527156-20527212)
chr4 (263-339)||(41085024-41085100)
[»] chr7 (50 HSPs)
chr7 (260-339)||(7799955-7800034)
chr7 (259-339)||(7175985-7176065)
chr7 (259-339)||(7275275-7275355)
chr7 (259-339)||(17212051-17212131)
chr7 (259-339)||(21217956-21218036)
chr7 (259-335)||(23854394-23854470)
chr7 (259-339)||(40543033-40543113)
chr7 (260-339)||(2103054-2103133)
chr7 (259-338)||(21370595-21370674)
chr7 (258-339)||(10091185-10091266)
chr7 (259-339)||(2751269-2751349)
chr7 (258-338)||(18044104-18044184)
chr7 (260-332)||(19421230-19421302)
chr7 (263-339)||(22119890-22119966)
chr7 (257-339)||(21835147-21835229)
chr7 (259-331)||(25333417-25333489)
chr7 (257-339)||(17197073-17197155)
chr7 (259-325)||(31713032-31713098)
chr7 (278-339)||(22703503-22703564)
chr7 (258-331)||(27009356-27009429)
chr7 (257-338)||(27312148-27312229)
chr7 (259-339)||(11997847-11997927)
chr7 (263-339)||(13332546-13332622)
chr7 (259-333)||(2344297-2344371)
chr7 (278-339)||(22299866-22299927)
chr7 (262-331)||(28089817-28089886)
chr7 (259-332)||(42913643-42913716)
chr7 (259-338)||(32849589-32849668)
chr7 (258-333)||(39145781-39145856)
chr7 (259-333)||(31197589-31197663)
chr7 (259-333)||(43785428-43785502)
chr7 (259-339)||(22638290-22638370)
chr7 (263-327)||(28003838-28003902)
chr7 (280-338)||(14199790-14199848)
chr7 (260-333)||(21574232-21574305)
chr7 (279-332)||(27704020-27704073)
chr7 (257-339)||(22696316-22696398)
chr7 (279-338)||(23012632-23012691)
chr7 (264-339)||(42814867-42814942)
chr7 (278-339)||(28950885-28950949)
chr7 (289-339)||(31273942-31273992)
chr7 (259-339)||(22264625-22264705)
chr7 (283-335)||(37473639-37473692)
chr7 (259-332)||(40332097-40332170)
chr7 (264-311)||(37056217-37056264)
chr7 (262-312)||(8435845-8435895)
chr7 (263-332)||(577681-577750)
chr7 (262-339)||(9718110-9718187)
chr7 (262-311)||(12211686-12211735)
chr7 (259-339)||(28646967-28647047)
[»] chr3 (50 HSPs)
chr3 (257-339)||(35492903-35492985)
chr3 (258-339)||(30807276-30807357)
chr3 (258-339)||(46576341-46576422)
chr3 (259-339)||(45529877-45529957)
chr3 (257-339)||(21362935-21363017)
chr3 (259-341)||(34492696-34492778)
chr3 (257-339)||(40940817-40940899)
chr3 (259-339)||(7485648-7485728)
chr3 (259-339)||(8456273-8456353)
chr3 (261-333)||(53424305-53424377)
chr3 (259-339)||(55287797-55287877)
chr3 (259-338)||(25289838-25289917)
chr3 (260-339)||(52455772-52455851)
chr3 (259-333)||(30257618-30257692)
chr3 (264-333)||(25379760-25379829)
chr3 (254-339)||(40133572-40133657)
chr3 (257-338)||(49258386-49258467)
chr3 (258-332)||(29915399-29915473)
chr3 (258-332)||(29964552-29964626)
chr3 (259-333)||(48977382-48977456)
chr3 (278-339)||(26108305-26108366)
chr3 (258-339)||(45272539-45272620)
chr3 (278-339)||(53234033-53234094)
chr3 (259-339)||(31537961-31538041)
chr3 (259-338)||(15566623-15566701)
chr3 (264-339)||(52821758-52821833)
chr3 (278-332)||(26174126-26174180)
chr3 (254-335)||(36660759-36660840)
chr3 (259-332)||(50582986-50583059)
chr3 (259-339)||(18177010-18177090)
chr3 (259-338)||(7470339-7470418)
chr3 (259-322)||(9842915-9842978)
chr3 (278-333)||(9853629-9853684)
chr3 (259-338)||(51532783-51532862)
chr3 (257-339)||(4462625-4462707)
chr3 (289-339)||(39041975-39042025)
chr3 (262-333)||(25344186-25344257)
chr3 (255-338)||(32151415-32151497)
chr3 (282-338)||(10083943-10083999)
chr3 (282-338)||(10190866-10190922)
chr3 (259-339)||(38732960-38733040)
chr3 (279-339)||(49167070-49167130)
chr3 (279-339)||(53288835-53288895)
chr3 (294-333)||(1692863-1692902)
chr3 (281-332)||(14343418-14343469)
chr3 (259-333)||(19857047-19857119)
chr3 (259-339)||(4252519-4252599)
chr3 (264-332)||(11390601-11390669)
chr3 (260-311)||(16140292-16140343)
chr3 (278-306)||(32094913-32094941)
[»] scaffold0199 (1 HSPs)
scaffold0199 (258-339)||(8530-8611)
[»] scaffold0070 (1 HSPs)
scaffold0070 (259-339)||(40319-40399)
[»] chr6 (29 HSPs)
chr6 (259-339)||(9238969-9239049)
chr6 (258-342)||(11007158-11007242)
chr6 (265-339)||(11448871-11448945)
chr6 (254-339)||(3222758-3222842)
chr6 (258-339)||(22576060-22576141)
chr6 (259-339)||(13753234-13753314)
chr6 (259-339)||(15360221-15360301)
chr6 (259-338)||(12591631-12591710)
chr6 (256-339)||(34147337-34147420)
chr6 (256-339)||(34159953-34160036)
chr6 (262-339)||(1344934-1345009)
chr6 (258-339)||(14212885-14212966)
chr6 (259-339)||(654269-654349)
chr6 (258-338)||(21148634-21148714)
chr6 (261-333)||(21982449-21982521)
chr6 (259-339)||(33718581-33718661)
chr6 (256-330)||(9843929-9844003)
chr6 (258-339)||(28672060-28672141)
chr6 (258-333)||(9208245-9208320)
chr6 (259-338)||(5360195-5360274)
chr6 (267-332)||(9690768-9690833)
chr6 (282-338)||(28968166-28968222)
chr6 (258-328)||(33499467-33499537)
chr6 (281-339)||(17149579-17149637)
chr6 (278-339)||(17081177-17081238)
chr6 (280-333)||(17706436-17706489)
chr6 (279-339)||(11840915-11840975)
chr6 (261-311)||(8479308-8479358)
chr6 (242-303)||(6556334-6556395)
[»] scaffold0623 (1 HSPs)
scaffold0623 (263-339)||(1179-1255)
[»] scaffold0576 (1 HSPs)
scaffold0576 (259-339)||(5205-5285)
[»] scaffold0366 (2 HSPs)
scaffold0366 (263-339)||(9422-9498)
scaffold0366 (263-332)||(12130-12199)
[»] scaffold0068 (1 HSPs)
scaffold0068 (258-338)||(41768-41848)
[»] scaffold0459 (1 HSPs)
scaffold0459 (263-332)||(10823-10892)
[»] scaffold0328 (1 HSPs)
scaffold0328 (259-339)||(14985-15065)
[»] scaffold0026 (1 HSPs)
scaffold0026 (259-339)||(97489-97569)
[»] scaffold0460 (1 HSPs)
scaffold0460 (259-339)||(8302-8382)
[»] scaffold0051 (1 HSPs)
scaffold0051 (260-339)||(52994-53073)
[»] scaffold0217 (1 HSPs)
scaffold0217 (259-333)||(7438-7512)
[»] scaffold0019 (1 HSPs)
scaffold0019 (284-339)||(161828-161883)
[»] scaffold0049 (1 HSPs)
scaffold0049 (259-333)||(66756-66830)
[»] scaffold0717 (1 HSPs)
scaffold0717 (278-338)||(82-142)
[»] scaffold0028 (1 HSPs)
scaffold0028 (259-333)||(27770-27844)
[»] scaffold0240 (1 HSPs)
scaffold0240 (258-332)||(12884-12958)
[»] scaffold0157 (1 HSPs)
scaffold0157 (289-339)||(20246-20296)
[»] scaffold0200 (1 HSPs)
scaffold0200 (259-338)||(26667-26746)
[»] scaffold0299 (1 HSPs)
scaffold0299 (284-339)||(11554-11610)
[»] scaffold0032 (1 HSPs)
scaffold0032 (283-338)||(49476-49532)


Alignment Details
Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 18534343 - 18534139
Alignment:
Q  18 agaaaagcatatttttgttggggatataatcatataggaaaataatgcgagaagtgcatgataattcctctcaaaagaaggnnnnnnnnntcatgctagt 117  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||| ||||    
T  18534343 agaagagcatatttttgttggggttataatcatataggaaaataatgcgagaagtgcatgataattcctctcaaaagaaaaagaaaaaaaaaatgttagt 18534244  T
Q  118 tatattgtatttgacatttaaattatggaagattaagaatgataataattaa-annnnnnnnnngcattttcttaatacgtcctttgttacttcatctca 216  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||            |||||||||||||||||||||||||||||||||||     
T  18534243 tatattgtatttgacatttaaattatggaagattaggaatgataataattaattttttttttttgcattttcttaatacgtcctttgttacttcatctct 18534144  T
Q  217 ttttt 221  Q
    |||||    
T  18534143 ttttt 18534139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 8077638 - 8077721
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8077638 tttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctg 8077721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 338
Target Start/End: Complemental strand, 18533998 - 18533848
Alignment:
Q  204 ttacttcatctcatttttaataaataattatgtattgaaaaataaagttgcat----------------ttaacccatttggggttgacatagtggttgg 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||||     
T  18533998 ttacttcatctcatttttaataaataattatgtattgaaaaataaagttgcattaatactttaaaggtattaacccatttggggttgacatagtggttga 18533899  T
Q  288 tttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
     ||| |||||| |||||||||||| ||||||| |||| || ||||||||||    
T  18533898 cttgagatcttagagtttgctcctccagaggtatcagatttgattctctct 18533848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 24674385 - 24674467
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  24674385 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 24674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 4621440 - 4621360
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  4621440 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 4621360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 7197449 - 7197369
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7197369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 15059605 - 15059525
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctg 15059525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 339
Target Start/End: Complemental strand, 46113600 - 46113525
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 46113525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 27455071 - 27454989
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||   |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  27455071 ttaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctg 27454989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 18646843 - 18646927
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||| ||||||||||||| |||||||||| ||| |||||| ||||||||| || |||||||||||||||||||||||||||    
T  18646843 atttaacctatttggggttgacctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctg 18646927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 30677170 - 30677250
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||    
T  30677170 aacccatttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctg 30677250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 34778336 - 34778416
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 34778416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 29057540 - 29057461
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||| || || |||||||||||||||||| ||||    
T  29057540 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctct 29057461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 7766932 - 7766850
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||||| | |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7766932 ttaacccattcggggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7766850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 24122016 - 24122097
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| |||||||||||| | |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  24122016 taactcatttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctg 24122097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 46607804 - 46607884
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 46607884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 9500533 - 9500478
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 9500478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 21726722 - 21726797
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||| ||||||| ||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||    
T  21726722 taacccatttgaggttgacctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattc 21726797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 32930749 - 32930816
Alignment:
Q  265 tttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||    
T  32930749 tttggggttgacctagtggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatt 32930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 7946836 - 7946918
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| ||| |||||||||| ||| ||||||| ||||||||||| ||||||||||| ||||||||| |||||    
T  7946836 ttaacccatttggggtcgacctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctg 7946918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 168195 - 168275
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||| |||| | |||||||||| |||||||||| |||||||||| |||| |||||||||||||||||| |||||    
T  168195 aacccatttggagttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctg 168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 20487393 - 20487313
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||   |||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  20487393 aacccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 20487313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 23734107 - 23734190
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||   |||| ||||| |||||||||| || ||||||||| ||||||||||||||||||||| |||||    
T  23734107 tttaacccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctg 23734190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 23741299 - 23741382
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||   |||| ||||| |||||||||| || ||||||||| ||||||||||||||||||||| |||||    
T  23741299 tttaacccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctg 23741382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 17935780 - 17935837
Alignment:
Q  276 catagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  17935780 catagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattc 17935837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 33905690 - 33905633
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 33905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 2272342 - 2272418
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||  |||||||||| |||||||||||| ||||||||||||||| ||||| |||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctg 2272418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 14258630 - 14258550
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| ||| | |||||||||| |||||||||||||||||| |||| |||| ||||| |||||||||| |||||    
T  14258630 aacccatttgggcttggcctagtggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccctctg 14258550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 7578422 - 7578477
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  7578422 tagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattc 7578477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 1138571 - 1138652
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||| ||| |||||| |||||||| |||||||    
T  1138571 ttaacccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctca-aggtcttaggttcgaatctctct 1138652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 24216973 - 24217045
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgatt 332  Q
    ||||||||||||||||| |||||||||  ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctca-aggtctcaggttcgatt 24217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 23232468 - 23232388
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| ||| | |||||||||  ||||||||||| ||||||||| | ||||||| ||||||||||||| |||||    
T  23232468 aacccatttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctg 23232388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 36156063 - 36156011
Alignment:
Q  287 gtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  36156063 gtttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctg 36156011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 45859222 - 45859166
Alignment:
Q  283 gttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctg 45859166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 6776139 - 6776193
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttca 314  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  6776139 aacccatttggg-ttggcctagtggttggtttgggatcttggagtttgctccttca 6776193  T

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Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 32729539 - 32729613
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | |||||||||| |||||||||| |||||||||||| ||| | ||||||||||||||||    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctca-aagtctcaggttcgattc 32729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 8779920 - 8779866
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||| |||||||    
T  8779920 tagtggttgatttgggatcttggagtttgcttctccagaggtctcagcttcgatt 8779866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 37351643 - 37351590
Alignment:
Q  280 gtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||| ||||||||||||||||||||||| || | ||||||||||||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattc 37351590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 1818730 - 1818802
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||| | | || ||||| || |||||||||||||||||| | ||||||| |||||||||||||    
T  1818730 cccatttggggttggcctggtagttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattc 1818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 19034569 - 19034509
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||||||||||| ||||  | |||| |||||||||||| ||||||    
T  19034569 agtggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctg 19034509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 1486415 - 1486458
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagt 303  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttggagt 1486458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 47091684 - 47091735
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcc 310  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||||||||||    
T  47091684 aacccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 1378892 - 1378965
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||  ||||| | |||||||||  ||||||||||||||||||||||| || | |||||| ||||||||    
T  1378892 aacccatttaaggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatt 1378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 1378743 - 1378819
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||   |||||||||  |||| |||||||||||| ||||| || |||||||| |||||||| ||||||    
T  1378743 catttggggttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgattttctctg 1378819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 25237192 - 25237113
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctct 338  Q
    ||||||||| | |||| | || ||||| |||||||||||||||||||||| || ||| |||||||||||||||||| ||||    
T  25237192 aacccatttagagttggcctaatggttagtttgggatcttggagtttgcttctctca-aggtctcaggttcgattccctct 25237113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 31162743 - 31162786
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttgga 301  Q
    |||| |||||||||||||| |||||||||||||| |||||||||    
T  31162743 taactcatttggggttgacctagtggttggtttgagatcttgga 31162786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 40146079 - 40146028
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcag 315  Q
    |||||| |||||| ||||||||| |||| ||||||| |||||||||||||||    
T  40146079 atttggagttgacctagtggttgatttgtgatcttgaagtttgctccttcag 40146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 809215 - 809289
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||| | |||||| | | |||||||||||||||||||||||||| |||||    |||||||||||| ||||    
T  809215 taacccatctagggttggcctcgtggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgatt 809289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 40802274 - 40802220
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctc 309  Q
    |||||||||||||||||||| | | |||||||| ||| ||| |||||||||||||    
T  40802274 atttaacccatttggggttggctttgtggttggcttgagatattggagtttgctc 40802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 16539625 - 16539682
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||||  |||||||   |||||||||||| ||||| |||||    
T  16539625 ggttggtttgggatcttggagtgagctccttgcaaggtctcaggtttgattccctctg 16539682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 52135127 - 52135203
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||   |||||||||  ||||||||||||||||||||| | ||| | ||||||||||||||| |||||    
T  52135127 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcatctca-atgtctcaggttcgattatctct 52135203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 2537697 - 2537737
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatctt 298  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  2537697 taacccatttggggttggcctagtggttggattgggatctt 2537737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 25496692 - 25496612
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||| |||||| |||| | ||||| |||| |||||||||||||| ||||||||    |||||||| ||||||||| ||||    
T  25496692 taacctatttggcgttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctct 25496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 41313984 - 41314066
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  41313984 ttaacccatttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 41314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 30467034 - 30466951
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctgct 341  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||    
T  30467034 taacccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgct 30466951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 17324764 - 17324840
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  17324764 catttggggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctg 17324840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 18976628 - 18976548
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  18976628 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctg 18976548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 33827776 - 33827696
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctg 33827696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 44946256 - 44946182
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||   |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 44946182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 11941415 - 11941339
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||||   |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||    
T  11941415 ttaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 11941339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 44976353 - 44976277
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  44976353 catttggggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctg 44976277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 8258896 - 8258971
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| |||| |||||||||||||||| |||||    
T  8258896 atttggggttgacataatggttagtttgagatcttggagtttgctcctccagatgtctcaggttcgattccctctg 8258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 10582176 - 10582113
Alignment:
Q  276 catagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  10582176 catagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 10582113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 4852551 - 4852632
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| |||||||||||||| |||||||||  |||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  4852551 taactcatttggggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 4852632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 43374505 - 43374448
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43374505 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 43374448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 27290601 - 27290656
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  27290601 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 27290656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 332
Target Start/End: Complemental strand, 4567637 - 4567567
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||||||| | |||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||    
T  4567637 ccatttggggttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatt 4567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 15037953 - 15038027
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | |||||||||  | ||||||||||||||||||||| || ||||||||||||||||||    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattc 15038027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 24195997 - 24196078
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||| |||| ||| |||||| ||||||| ||||||||||||| |||||    
T  24195997 taacccatttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccctctg 24196078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 8192553 - 8192474
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| | |||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||||| |||||    
T  8192553 acccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctca-aggtctcaggttcgattccctctg 8192474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 25293160 - 25293240
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| |||||   |||||||||  |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  25293160 aacccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctg 25293240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 6714485 - 6714410
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||| ||| | || ||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||    
T  6714485 taacccatttgggattggcctaatggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattc 6714410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 32526291 - 32526214
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    |||||||||||||| |||| | ||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  32526291 tttaacccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctca-aggtctcaggttcgattc 32526214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 36390769 - 36390698
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | ||||||||||||||||||||  ||||||||| || || |||||||||||||||||    
T  36390769 aacccatttggggttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatt 36390698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 27269553 - 27269501
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  27269553 aacccatttggggttggcatagtggttggcttgggatcttcgagtttgctcct 27269501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 32845085 - 32845165
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||| ||| | ||||||||||||||||||||||| || | || ||||||||||||| |||||    
T  32845085 aacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctg 32845165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 34516589 - 34516537
Alignment:
Q  281 tggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  34516589 tggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 41329842 - 41329917
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||| | |||||||| |||||||||||| |||||||||||| || |||| |||| |||||||| |||||    
T  41329842 atttggggttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctg 41329917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 5394034 - 5394091
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||| ||||||||||||||||||| || |||||||||||||||||| |||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 5394091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 36242492 - 36242435
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||||||||||| | ||||||||| ||||||||||||||||||||| |||||    
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctg 36242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 1191530 - 1191586
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  1191530 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctct 1191586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 10324891 - 10324938
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttg 306  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  10324891 aacccatttggggttggcatagtggttggtttgggatattgaagtttg 10324938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 35171831 - 35171874
Alignment:
Q  296 cttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctg 35171874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 918898 - 918833
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcg 329  Q
    |||||||||||||| |||||||||| ||||||| ||| |||||||||| || ||||||||| |||||    
T  918898 catttggggttgacctagtggttggcttgggattttgaagtttgctcc-tctgaggtctcaagttcg 918833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 19849847 - 19849901
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||| ||||||||||||||||||| || |||||| | |||||||||    
T  19849847 agtggttggtttgagatcttggagtttgctcctccaaaggtcttaagttcgattc 19849901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 5608202 - 5608157
Alignment:
Q  294 atcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||    
T  5608202 atcttggaatttgctccttcagaggtctcatattcgattctctctg 5608157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 28194337 - 28194256
Alignment:
Q  259 aacccatttggggttgacatagtggtt-ggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | ||||| || || ||||||||||||||| |||||||    |||||| |||||||||||||||||    
T  28194337 aacccatttggggttggcgtagtgatttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctg 28194256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 19054021 - 19054093
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||| | | ||||| |||| ||| ||||||||||| ||||||| || |||||||||||| |||||    
T  19054021 cccatttggggtgggcctagtgattggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattc 19054093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 40997534 - 40997479
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||  ||||||||||||||||||||||| || |||||||| |||| ||||    
T  40997534 tagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattc 40997479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 338
Target Start/End: Complemental strand, 19606038 - 19605969
Alignment:
Q  269 gggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctct 338  Q
    |||||| | |||||||||| |||||||||||||||  |||||| ||| |||||||||||||||||| ||||    
T  19606038 gggttgccctagtggttggcttgggatcttggagtgcgctcctctca-aggtctcaggttcgattccctct 19605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 44610090 - 44610140
Alignment:
Q  281 tggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgat 331  Q
    ||||||| ||| ||||||||||||||||| | || ||||||||||||||||    
T  44610090 tggttggcttgagatcttggagtttgctcttccaaaggtctcaggttcgat 44610140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 1845861 - 1845808
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||| |||||||||  | | ||||||| |||||||||||||||||||||||    
T  1845861 taacccacttggggttggtacattggttggcttgggatcttggagtttgctcct 1845808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 4718642 - 4718723
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4718642 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 4718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 34237858 - 34237778
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  34237858 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 34237778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 28193469 - 28193552
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  28193469 tttaacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 28193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 18532105 - 18532179
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  18532105 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 18532179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 3734826 - 3734746
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  3734826 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 3734746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 19471603 - 19471687
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| ||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  19471603 atttgacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 19471687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 19542527 - 19542611
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| ||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  19542527 atttgacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 19542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 19590169 - 19590085
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| ||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  19590169 atttgacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 19590085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 39349254 - 39349334
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 39349334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 27746535 - 27746464
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  27746535 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 27746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 4698903 - 4698846
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4698903 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 4698846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 15259606 - 15259529
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  15259606 ccatttggggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctg 15259529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 2618184 - 2618264
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||  |||||||||| |||||    
T  2618184 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctg 2618264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 42643322 - 42643242
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||||||||| | |||||||||  ||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  42643322 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctct 42643242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 20305905 - 20305980
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||||||| || ||||||||| ||||||||    
T  20305905 taacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattc 20305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 21092538 - 21092613
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||||||| || ||||||||| ||||||||    
T  21092538 taacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattc 21092613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 8042655 - 8042724
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgat 331  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||||||| || | ||||||||||||||    
T  8042655 ccatttggggttgacctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

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Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 14632975 - 14633032
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 14633032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 32879277 - 32879357
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||   |||||||||  |||||||||| ||||||| |||| ||||||||||||||||||||| |||||    
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctg 32879357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 21603247 - 21603302
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  21603247 tagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattc 21603302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 42328004 - 42328082
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||| |||||    
T  42328004 acccatttggggttggcctagtggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctg 42328082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 264597 - 264523
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| |||| | |||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||| ||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctct 264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 651324 - 651398
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| |||| | |||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||| ||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctct 651398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 837059 - 837133
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| |||| | |||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||| ||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctct 837133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 20469940 - 20469994
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  20469940 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctct 20469994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 2166695 - 2166771
Alignment:
Q  259 aacccatttggggttgacatagtg--gttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| |  ||||  |||||||||||||||||||||||||| || || ||||||||||||||||||    
T  2166695 aacccatttggggttggcccagtgcagttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattc 2166771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 7558146 - 7558073
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | |||| ||| | ||||||||||||||||||||||| |||| ||||||| |||||||    
T  7558146 aacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccagaagtctcagattcgatt 7558073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 24018380 - 24018453
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||| ||||||||||||  |||||||||  ||||||||||||||||||||||| || |||||| ||||||||||    
T  24018380 aacctatttggggttgatctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 28088284 - 28088358
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||| |||||||| | |||||||||  |||||||||||||||||| || | |||||||||||| ||||||||    
T  28088284 aacccatctggggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattc 28088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 26169051 - 26168977
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    ||||||||| |||||| | |||||||| | ||||||||||||||||||||||| ||| |||||||||||| |||||    
T  26169051 aacccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctca-aggtctcaggtttgattc 26168977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 8765704 - 8765649
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| ||| ||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  8765704 ttggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctg 8765649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 28964033 - 28964083
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||||   |||||||||||||| |||||| ||||||||||||    
T  28964033 cccatttggggttggtctagtggttggtttgagatcttagagtttgctcct 28964083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 9047462 - 9047429
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctcct 311  Q
    |||||||||||||| |||||||||||||||||||    
T  9047462 tagtggttggtttgagatcttggagtttgctcct 9047429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 36848949 - 36848900
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||| |||||||||||  ||||| | |||||||||||||||    
T  36848949 ccatttggggttggcatagtggttgacttgggtttttggagtttgctcct 36848900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 34694776 - 34694705
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    |||||||||||||   |||||||||  ||| ||||||||||||||||||| ||| |||||| |||||||||||    
T  34694776 ccatttggggttggtctagtggttgacttgtgatcttggagtttgctcctctca-aggtcttaggttcgattc 34694705  T

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Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 13038658 - 13038577
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13038658 taacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 13038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 1827735 - 1827653
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1827735 ttaacccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctg 1827653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 11926707 - 11926625
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  11926707 ttaacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctg 11926625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 340
Target Start/End: Original strand, 22392695 - 22392776
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctgc 340  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgc 22392776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 27498937 - 27498854
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||  |||||||||||||||||||| |||||    
T  27498937 tttaacccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctg 27498854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 13108653 - 13108572
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  13108653 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctg 13108572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 15641309 - 15641228
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||  | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  15641309 taacccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 15641228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 25586926 - 25586999
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  25586926 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25586999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 30485822 - 30485902
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| |  || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctg 30485902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 32059644 - 32059569
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  32059644 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 32059569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 8484861 - 8484784
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  8484861 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 8484784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 38631161 - 38631084
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  38631161 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctg 38631084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 33709707 - 33709624
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  33709707 atttaacccatttggg-ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 33709624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 34310136 - 34310216
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | ||||||| || |||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctg 34310216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 36954813 - 36954892
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| | |||||||||  |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  36954813 acccatttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctg 36954892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 34049816 - 34049890
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||   |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  34049816 aacccatttggggttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 34049890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 15971321 - 15971252
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||| |||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  15971321 catttagggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 15931053 - 15931133
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||| | |||||||||||||||||||| ||||| | |||||||||||||||| |||||    
T  15931053 aacccatttggggttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctctg 15931133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 38684202 - 38684282
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||||||||| |  ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  38684202 aacccacttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 38684282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 7085829 - 7085750
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||| ||||| |||||||||| |||||||||| ||||    
T  7085829 aacccatttggggctggcttagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctct 7085750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 31288149 - 31288075
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||| |||||| | |||||||||| ||||||||||||||||||||||| || |||||||| |||||||||    
T  31288149 aacccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattc 31288075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 37495044 - 37495121
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||   || |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  37495044 aacccatttgggg---acctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctg 37495121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 18207226 - 18207275
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18207226 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 18207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 23270725 - 23270652
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||| | || |||||||| ||||||||    
T  23270725 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 4603774 - 4603845
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||| || || ||||| |||||||||    
T  4603774 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattc 4603845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 316
Target Start/End: Complemental strand, 3715112 - 3715055
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcaga 316  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  3715112 aaccaatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaga 3715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 19456389 - 19456340
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgat 331  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 25750811 - 25750750
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctca 323  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||||| |||||||||||    
T  25750811 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctca 25750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 27487755 - 27487690
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggtt 327  Q
    ||||||||||||| | ||||||||| |||||||| ||||||||||||| | |||||||||||||||    
T  27487755 ccatttggggttggcctagtggttgatttgggattttggagtttgctcttccagaggtctcaggtt 27487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 5067295 - 5067375
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||| ||||   |||||||||  |||||||||| |||||||||||| ||||| |||||||||||||| ||||||    
T  5067295 aacccatttggagttggtctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggttcgattttctctg 5067375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 21236566 - 21236486
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||| |||||| | |||| ||| | || |||||||||||||| |||||||||||||||  |||||||||||||||    
T  21236566 taacccatttagggttggcttagtagttcgcttaggatcttggagttttctccttcagaggtcttcggttcgattctctct 21236486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 12398628 - 12398577
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 12398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 10869760 - 10869694
Alignment:
Q  267 tggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||| ||| |||||||  ||| ||||||||||||||||||| || ||||||||||||||||||    
T  10869760 tggggttggcatggtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattc 10869694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 12317353 - 12317280
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||||   |||||||| |||| ||||    
T  12317353 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatt 12317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 42193475 - 42193552
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||   |||| | |||||||||  |||||||||||||||||||| |  ||||||||||||||||||||    
T  42193475 atttaacccatttattgttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatt 42193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 6014473 - 6014410
Alignment:
Q  269 gggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||| | ||||| |||| |||||||||||||||||||| || ||||| ||||||||||||||    
T  6014473 gggttggcctagtgattggcttgggatcttggagtttgcttctccagagatctcaggttcgatt 6014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 19145612 - 19145534
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||| | |||||||||  ||||||||||||||| ||||||| ||| ||||||| |||||||||| |||||    
T  19145612 cccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctca-aggtctccggttcgattccctctg 19145534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 21042730 - 21042675
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctcctt 312  Q
    ||||| ||||||||||||   ||||| |||||||||||||||||||||||||||||    
T  21042730 ttaactcatttggggttggtttagtgattggtttgggatcttggagtttgctcctt 21042675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 11465111 - 11465037
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||| |||||| | ||||| |||| |||  |||||||||||||||||| || | |||||||||||||||    
T  11465111 taacccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatt 11465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 37397707 - 37397781
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||| |||||||||||   |||||||||| ||| ||||||||||||||||||| || |||||| ||||| |||||    
T  37397707 aacctatttggggttggtctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattc 37397781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 7151346 - 7151403
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| |||||||||||||||||||||||  |||||||| |||||||| || |||||    
T  7151346 ggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctg 7151403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 12647734 - 12647786
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    |||||||||| ||||||| ||||||||||||| ||||||| |||||| |||||    
T  12647734 aacccatttgaggttgacctagtggttggtttaggatctttgagtttactcct 12647786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 2499376 - 2499305
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctc 335  Q
    ||||||||||| | |||||| ||  ||||||||||||| ||||||||||   | ||||||||||||||||||    
T  2499376 atttggggttggcttagtggctgacttgggatcttggaatttgctcctttcaaagtctcaggttcgattctc 2499305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 16616111 - 16616186
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||| | ||| | |||| ||||| |||||||||||||||||||||||  | || |||||| |||||||    
T  16616111 ttaacccatttgagattggcttagtagttggcttgggatcttggagtttgctcctctaaagatctcagattcgatt 16616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 8780475 - 8780551
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctct 338  Q
    ||||||| ||||||| |||||||||   | |||||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  8780475 ccatttgaggttgacctagtggttgacatcggatcttggagtgtgctcctctca-aggtctcaggttcgattgtctct 8780551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 10399786 - 10399847
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||  || ||||||||||||||||| ||||| || | ||||||| |||||||||||    
T  10399786 tagtggttgactttggatcttggagtttgcttcttcaaagatttcaggtttgattctctctg 10399847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 17015593 - 17015536
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| ||| ||||||| ||||| ||| ||||||||||||||||| ||||| |||||    
T  17015593 ggttggcttgagatcttgaagtttcctctttcagaggtctcaggtttgattccctctg 17015536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 33025473 - 33025526
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||||||| | | | |||||| ||||||||||||||| |||||||    
T  33025473 taacccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcct 33025526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 40330628 - 40330704
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctct 336  Q
    ||||||||| ||||| | |||||||| | ||| ||||||||||||||||||| ||| |||||||| |||| |||||||    
T  40330628 acccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctca-aggtctcaagttcaattctct 40330704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 9585716 - 9585664
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    |||||||||||||||||  |||| |||| ||| ||||||||||||| ||||||    
T  9585716 aacccatttggggttgatttagttgttgatttaggatcttggagttcgctcct 9585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 15485495 - 15485420
Alignment:
Q  259 aacccatttggggttgacatagtgg-ttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | ||| || |||| |||||| |||||||| ||||||| ||| ||||||||||||||||||    
T  15485495 aacccatttggggttggcctagcgggttggcttgggaccttggagtgtgctcctctca-aggtctcaggttcgattc 15485420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 19230469 - 19230513
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagt 303  Q
    |||||| ||||||||| | |||||||| |||||||||||||||||    
T  19230469 aacccaattggggttggcctagtggttagtttgggatcttggagt 19230513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 33992620 - 33992700
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  33992620 aacccatttagggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctg 33992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 5609405 - 5609325
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  5609405 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctg 5609325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 40059055 - 40058975
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  40059055 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 40058975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 19660738 - 19660655
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||| |||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  19660738 tttaacccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctg 19660655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 46714386 - 46714459
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  46714386 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 25852208 - 25852288
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  25852208 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 25852288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 27528998 - 27528918
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||| |||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  27528998 aacccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 27528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 32986191 - 32986271
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctg 32986271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 34844961 - 34844881
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34844961 aacccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctctg 34844881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 49287872 - 49287932
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctg 49287932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 52983613 - 52983693
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  52983613 aacccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctg 52983693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 13873497 - 13873418
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| | |||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  13873497 acccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctg 13873418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 1985830 - 1985904
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 1985904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 33696483 - 33696402
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  33696483 taacccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctg 33696402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 22625273 - 22625193
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||| | |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  22625273 aacccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctg 22625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 43719264 - 43719189
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||||   |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  43719264 catttggggttggtctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattctctct 43719189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 54127545 - 54127466
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || ||||||||||||| |||| ||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctct 54127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 18875721 - 18875639
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||| || ||||||||||||||| |||||    
T  18875721 ttaacccatttgtggttgacatagtggttggtttgggattttagagtttgtttcttcaaagatctcaggttcgattccctctg 18875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 35229172 - 35229236
Alignment:
Q  269 gggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 35229236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 20566341 - 20566424
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggt-ctcaggttcgattctctctg 339  Q
    |||| ||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||| |||||    
T  20566341 ttaatccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctg 20566424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 35674944 - 35674864
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||||||||| | || ||||| |||||||||||| |||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctg 35674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 36131715 - 36131639
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||||| |||||||||| | ||||||| |||||||| | |||| |||| ||||||||||||||||    
T  36131715 ttaacccatttggggttggcatagtggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattc 36131639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 51535611 - 51535687
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||| |||||| | |||||||||  ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  51535611 catttagggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctg 51535687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 2351026 - 2351087
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||| |||||    
T  2351026 tagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctg 2351087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 45787902 - 45787827
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||| |||| |||||||| ||||||||| ||||| ||||||||||||||| |||||    
T  45787902 catttggggttggcctagtggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccctctg 45787827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 7392143 - 7392092
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 7392092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 32942369 - 32942444
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||   |||||||||| ||| ||||||||||||| ||||| ||||||| | |||||||||||||||||    
T  32942369 atttggggttggtctagtggttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctg 32942444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 12500231 - 12500181
Alignment:
Q  289 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctg 12500181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 20078163 - 20078113
Alignment:
Q  283 gttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 20078113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 34722164 - 34722222
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagag 317  Q
    |||| ||||||||||| | |||||||||| ||||||||||||||||||||||| |||||    
T  34722164 aacctatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagag 34722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 55961939 - 55961883
Alignment:
Q  265 tttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtct 321  Q
    |||||| ||| | |||||||||| ||||||||||||||||||||||| |||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 42245744 - 42245819
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||| | |||||||||  |||||||||| ||||||||||||  | ||||||| |||||||||| ||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccctct 42245819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 41621800 - 41621747
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||||||| | || ||||||| ||| |||||||||||||||||||    
T  41621800 taacccatttggggttggcctaatggttggcttgagatcttggagtttgctcct 41621747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 7093390 - 7093450
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||| ||||||||||||||| ||||||||   |||| | |||||||||||||||||    
T  7093390 agtggttggcttgggatcttggagtgtgctcctttcaaggttttaggttcgattctctctg 7093450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 339
Target Start/End: Complemental strand, 9646414 - 9646339
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||   ||||||||||||||||||||| |||| ||||||| ||| |||||||| ||| |||||||||||    
T  9646414 atttggggttggtctagtggttggtttgggatctttgagtgtgctcctgtca-aggtctcatgtttgattctctctg 9646339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 30938269 - 30938217
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttc-agaggtctcaggttcgattctc 335  Q
    |||||||||||||||||||| ||||||| |  |||||||||||||||||||||    
T  30938269 ttggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 34835527 - 34835603
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||   |||||||||| |||||||||| ||||||||||||    |||||||| ||||||||| |||||    
T  34835527 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctg 34835603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 44343504 - 44343588
Alignment:
Q  256 tttaacccatttggggttgacatagtggtt-ggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||| |||||||||||   |||||||| || ||||||||||||||||||||||  || ||| |||| ||||||||| |||||    
T  44343504 tttaacctatttggggttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctg 44343588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 12710192 - 12710247
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||||||||||||| |||| ||    ||||||||||||||||||    
T  12710192 tagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattc 12710247  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 40307534 - 40307588
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    |||||||||||||  ||||| ||||| |||||||||||| ||||||| |||||||    
T  40307534 ttaacccatttggaattgacctagtgtttggtttgggattttggagtgtgctcct 40307588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 13584454 - 13584377
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||| ||||| | ||||||||||  || ||| ||||||||||||||| || | |||||| ||||||||| |||||    
T  13584454 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctg 13584377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 30879345 - 30879288
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| ||||||||||||||  ||| | ||||| ||||| |||||    
T  30879345 ggttggtttgggatcttgtagtttgctccttcatgggttttaggtttgattccctctg 30879288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 311
Target Start/End: Original strand, 39288883 - 39288912
Alignment:
Q  282 ggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||||||||||||||||||||    
T  39288883 ggttggtttgggatcttggagtttgctcct 39288912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 20527212 - 20527156
Alignment:
Q  283 gttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||| ||| |||||||||| |||| ||||||||||| ||| ||||| |||||    
T  20527212 gttggtttgagattttggagtttgttcctccagaggtctcaagtttgattccctctg 20527156  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 41085024 - 41085100
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||  |||||||||  ||| ||||||||||| | ||||||   |||||| | |||||||||||||||    
T  41085024 catttggggttgatctagtggttgacttgagatcttggagtgtcctcctttcaaggtctaatgttcgattctctctg 41085100  T

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Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 7800034 - 7799955
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7799955  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 7176065 - 7175985
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7176065 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7175985  T

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Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 7275275 - 7275355
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7275355  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 17212051 - 17212131
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctg 17212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 21218036 - 21217956
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  21218036 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 21217956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 23854394 - 23854470
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctc 335  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctc 23854470  T

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Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 40543113 - 40543033
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  40543113 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 40543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 2103054 - 2103133
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  2103054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 2103133  T

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Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 21370595 - 21370674
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  21370595 aacccatttggggttggcctagtggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccctct 21370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 10091185 - 10091266
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||   |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  10091185 taacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 10091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 2751269 - 2751349
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  2751269 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 2751349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 18044104 - 18044184
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  18044104 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctct 18044184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 19421230 - 19421302
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  19421230 acccatttggggttgacttagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 19421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 22119890 - 22119966
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22119966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 21835147 - 21835229
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  21835147 ttaatccatttagggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctg 21835229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 25333417 - 25333489
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgat 331  Q
    |||||||||||||||| | |||||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  25333417 aacccatttggggttggcttagtggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgat 25333489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 17197155 - 17197073
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | | |||||||||||||| ||||||||||||||||||| || |||||||| ||||||||| |||||    
T  17197155 ttaacccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctg 17197073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 31713098 - 31713032
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcagg 325  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  31713098 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcagg 31713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 22703503 - 22703564
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 27009356 - 27009429
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgat 331  Q
    ||||||||||||||||| | |||||||||| || |||||||||||||||||| | |||||||||||||||||||    
T  27009356 taacccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgat 27009429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 27312148 - 27312229
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| ||||||||||| | |||||||||| |||||||||||||||||||||||  |||||| ||||||||||||| ||||    
T  27312148 ttaacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctct 27312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 11997847 - 11997927
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| |||||   |||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctg 11997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 13332622 - 13332546
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| | |||||||||||| |||||| |||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctg 13332546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 2344297 - 2344371
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || || |||||| ||||||||    
T  2344297 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattc 2344371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 22299866 - 22299927
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  22299866 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 22299927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 28089817 - 28089886
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgat 331  Q
    ||||||||||||| | |||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||    
T  28089817 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgat 28089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 42913716 - 42913643
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||  ||||| | |||||||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  42913716 aacccattttcggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 42913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 32849589 - 32849668
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||  | |||||||||  ||||||||||||||||||||||| |||||||||| |||| ||||| ||||    
T  32849589 aacccatttggggttagcctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccctct 32849668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 39145856 - 39145781
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||| ||||||| |||||||||  ||||||||||||||||||||||| |||| ||||  ||||||||||    
T  39145856 taacccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattc 39145781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 31197589 - 31197663
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||   |||||||||| ||||||||||||||||||||| | |||| |||||||||| |||||    
T  31197589 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattc 31197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 43785502 - 43785428
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||||| || ||||||| |||||||||| ||| |||||||| || |||||||| |||||||||    
T  43785502 aacccatttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattc 43785428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 22638290 - 22638370
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||   |||||||||  ||| |||||| |||||||||| |||| |||||||||||||||||| |||||    
T  22638290 aacccatttggggttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccctctg 22638370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 28003838 - 28003902
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggtt 327  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||| |||| |||| |||||    
T  28003838 catttggggttgatctagtggttggcttgggatcttggagtttgctcctccagaagtcttaggtt 28003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 14199848 - 14199790
Alignment:
Q  280 gtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||| ||||| |||||||||||| ||||| ||||||||||||||||||||| ||||    
T  14199848 gtggttgatttggaatcttggagtttcctcctccagaggtctcaggttcgattccctct 14199790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 333
Target Start/End: Complemental strand, 21574305 - 21574232
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| ||||||| ||| ||||| ||||||||||||    
T  21574305 acccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctca-aggtcacaggttcgattc 21574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 27704020 - 27704073
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  27704020 agtggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatt 27704073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 22696316 - 22696398
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    ||||| |||| ||||||| | ||||||||| |||||||||||||||| ||||||| ||| |||||||||||| ||||| |||||    
T  22696316 ttaactcattaggggttggcctagtggttgatttgggatcttggagtgtgctcctctca-aggtctcaggtttgattccctctg 22696398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 23012691 - 23012632
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||| |||||||||||||||||||| || ||||||||| ||||| ||||| ||||    
T  23012691 agtggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctct 23012632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 42814867 - 42814942
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| |||| | |||||||||  |||||||||||||||||||||||   || |||||||||||||||| |||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctg 42814942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 28950885 - 28950949
Alignment:
Q  278 tagtggttggtttgggatcttggagt---ttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||| |||||||||   ||||||||||||||||||||||||||| || |||||    
T  28950885 tagtggttggcttggggtcttggagtagtttgctccttcagaggtctcaggttcgactccctctg 28950949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 31273942 - 31273992
Alignment:
Q  289 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||    
T  31273942 ttgggatcttggagtttgctcctccagagctctcaagttcgattccctctg 31273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 22264705 - 22264625
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| |  |  ||||||||||| |||||||||||||||||| ||| ||||||||| |||||||| |||||    
T  22264705 aacccatttggggttggccgaagggttggtttggaatcttggagtttgctcctctca-aggtctcagattcgattccctctg 22264625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 37473639 - 37473692
Alignment:
Q  283 gttggtttgggatcttggagtttgctccttc-agaggtctcaggttcgattctc 335  Q
    ||||||||||||||| ||||||||||||| |  |||||||||||||||||||||    
T  37473639 gttggtttgggatctaggagtttgctcctccttgaggtctcaggttcgattctc 37473692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 40332097 - 40332170
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||||| ||||   |||||||||| |||  ||||||||||||||||||  | |||||||||||||||||    
T  40332097 aacccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 37056217 - 37056264
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||  |||||||||||||| ||||||||||| |||||||    
T  37056217 atttggggttgatttagtggttggtttgtgatcttggagtgtgctcct 37056264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 8435895 - 8435845
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctcctt 312  Q
    |||||||||||||   |||||||||  ||||||||||||||||||||||||    
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcctt 8435845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 577681 - 577750
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||| | |||||||| | |||||||||| |||||||||| ||   |||||| ||||||||||    
T  577681 catttggggttggcctagtggtttgcttgggatcttagagtttgctcatttcaaggtcttaggttcgatt 577750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 9718187 - 9718110
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||| ||||| | ||||||||||  || ||| ||||||||||||||| || | |||||| ||||||||| |||||    
T  9718187 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccctctg 9718110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 12211735 - 12211686
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||| | |||||||||| || |||||||||||| |||||||    
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtgctcct 12211686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 28646967 - 28647047
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    |||| ||||||||||| | ||||| |||  ||||||||||||||| |||| || ||| |||||||||||||||||| |||||    
T  28646967 aacctatttggggttggcctagtgattgacttgggatcttggagtgtgcttctctca-aggtctcaggttcgattccctctg 28647047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 35492903 - 35492985
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  35492903 ttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 35492985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 30807357 - 30807276
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  30807357 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 30807276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 46576341 - 46576422
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  46576341 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 46576422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 45529957 - 45529877
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  45529957 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 45529877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 21362935 - 21363017
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||| | |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  21362935 ttaacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 21363017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 341
Target Start/End: Complemental strand, 34492778 - 34492696
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctgct 341  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgct 34492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 40940817 - 40940899
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||   |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  40940817 ttaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 40940899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 7485728 - 7485648
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  7485728 aacccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 7485648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 8456353 - 8456273
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctg 8456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 53424377 - 53424305
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  53424377 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 53424305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 55287797 - 55287877
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| |||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||| |||||    
T  55287797 aacccatttggggttggcatagtggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccctctg 55287877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 25289917 - 25289838
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||||||||   |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctct 25289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 52455851 - 52455772
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| | |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 52455772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 30257618 - 30257692
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  30257618 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 30257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 25379760 - 25379829
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 25379829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 339
Target Start/End: Complemental strand, 40133657 - 40133572
Alignment:
Q  254 catttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| |||||||||||||||| | |||||||||| ||||||| ||||||||||||||| || |||||||||||||||||| |||||    
T  40133657 cattgaacccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctg 40133572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 49258467 - 49258386
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||||  | |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  49258467 ttaacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctct 49258386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 29915473 - 29915399
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||| |||||||| || ||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  29915473 taacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 29964626 - 29964552
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||| |||||||| || ||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  29964626 taacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 48977382 - 48977456
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||||||||| || ||||||||||||||||||    
T  48977382 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 48977456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 26108305 - 26108366
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  26108305 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 26108366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 45272620 - 45272539
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||| ||||| ||||||||||||||||||||||| |||| ||||||| |||||||| |||||    
T  45272620 taacccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctg 45272539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 53234094 - 53234033
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  53234094 tagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctg 53234033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 31538041 - 31537961
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| || |||||||||||||||||||| ||||||||||| ||| ||||| |||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctg 31537961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 15566701 - 15566623
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||| ||| | |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  15566701 aacccatttggg-ttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctct 15566623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 339
Target Start/End: Complemental strand, 52821833 - 52821758
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||| |||| | |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 52821758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 26174126 - 26174180
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  26174126 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 26174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 36660759 - 36660840
Alignment:
Q  254 catttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctc 335  Q
    |||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  36660759 cattgaacgcatttggggttgacctagtggttggtttaggatcttggagtttgctcctctca-aggtctcaggttcaattctc 36660840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 50582986 - 50583059
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||    |||| ||||||||||||    
T  50582986 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatt 50583059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 18177090 - 18177010
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||  ||| ||||||||||||||||| | ||||||| ||||||||||||| |||||    
T  18177090 aacccatttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccctctg 18177010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 7470418 - 7470339
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||  | |||||||||  ||| ||||||||||||||||||| || |||||||||||||||||| ||||    
T  7470418 aacccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctct 7470339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 9842915 - 9842978
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctc 322  Q
    ||||||||||||||||   |||||||||||||||||||||||||||| ||||| ||||||||||    
T  9842915 aacccatttggggttggtctagtggttggtttgggatcttggagttttctcctccagaggtctc 9842978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 9853629 - 9853684
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  9853629 tagtggttagtttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 9853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 51532783 - 51532862
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||||| || | ||||||||| ||| |||||||||||| || || |||||||| ||||||||||||||    
T  51532783 aacccatttggggttgacctattagttggtttgagattttggagtttgcttctccaaaggtctcatgttcgattctctct 51532862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 4462625 - 4462707
Alignment:
Q  257 ttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||| |||||||||||| | |||||||||| ||| |||||||||||||||| ||||| | |||||| ||||||||| |||||    
T  4462625 ttaactcatttggggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccctctg 4462707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 39042025 - 39041975
Alignment:
Q  289 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  39042025 ttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctg 39041975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 25344257 - 25344186
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||||| ||||| ||||||||| |||||    
T  25344257 ccatttggggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattc 25344186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 32151415 - 32151497
Alignment:
Q  255 atttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||| ||| | |||||||||  ||||||||||||||||||||||| || |||| |||  |||||||||||||    
T  32151415 atttaacccatttggg-ttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctct 32151497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 10083999 - 10083943
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctct 10083943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 10190922 - 10190866
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctct 10190866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 38732960 - 38733040
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| |||||   || ||||||  |||| ||||||||||||| |||| |||||||||||||| ||||||||||||    
T  38732960 aacccatttgaggttgggctaatggttgacttggaatcttggagtttgttcctccagaggtctcaggtccgattctctctg 38733040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 49167070 - 49167130
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||| ||| ||||||||||||||||||| || || | |||||||||||||||||||    
T  49167070 agtggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctg 49167130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 53288895 - 53288835
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| || |||||||||||| || |||||||||| ||||||| |||||    
T  53288895 agtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccctctg 53288835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 333
Target Start/End: Original strand, 1692863 - 1692902
Alignment:
Q  294 atcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattc 1692902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 14343469 - 14343418
Alignment:
Q  281 tggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| |||||||    
T  14343469 tggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatt 14343418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 19857047 - 19857119
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||| ||| | | |||||||| |||| |||||||||||||||||| |||| ||||||||||||||||    
T  19857047 aacccatttggg-ttggcctggtggttggcttgg-atcttggagtttgctcctccagatgtctcaggttcgattc 19857119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 4252599 - 4252519
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||| ||||||||||| ||||||| ||| |||||||| ||| ||||| |||||    
T  4252599 aacccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctca-aggtctcaagtttgattccctctg 4252519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 11390601 - 11390669
Alignment:
Q  264 atttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||||||||| | |||||||||||||| ||||||||||||| ||||| || || | ||||||| ||||    
T  11390601 atttggggttggcctagtggttggtttgagatcttggagttttctcctccaaagatttcaggtttgatt 11390669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 16140292 - 16140343
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    ||||||||||||||| | ||||| || |||||||||||||||| ||||||||    
T  16140292 acccatttggggttggcctagtgattagtttgggatcttggagcttgctcct 16140343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 32094941 - 32094913
Alignment:
Q  278 tagtggttggtttgggatcttggagtttg 306  Q
    |||||||||||||||||||||||||||||    
T  32094941 tagtggttggtttgggatcttggagtttg 32094913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 8611 - 8530
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  8611 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctg 8530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 40319 - 40399
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  40319 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 40399  T

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Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 9238969 - 9239049
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  9238969 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 9239049  T

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Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 11007158 - 11007242
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctgctc 342  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| ||||||||    
T  11007158 taacccatttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctc 11007242  T

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Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 11448871 - 11448945
Alignment:
Q  265 tttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctg 11448945  T

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Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 339
Target Start/End: Complemental strand, 3222842 - 3222758
Alignment:
Q  254 catttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  3222842 catttaacccatttggggttggcctagtggttggcttgggatcttgcagtttgctcc-tcagaggtctcaggttcgattccctctg 3222758  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 22576060 - 22576141
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  22576060 taacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctg 22576141  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 13753234 - 13753314
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  13753234 aacccatttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattctctctg 13753314  T

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Target: chr6; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 15360301 - 15360221
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  15360301 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 15360221  T

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Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 12591631 - 12591710
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctct 12591710  T

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Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 34147337 - 34147420
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | |||| |||||||||||||||| |||||    
T  34147337 tttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctg 34147420  T

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Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 34159953 - 34160036
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | |||| |||||||||||||||| |||||    
T  34159953 tttaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctg 34160036  T

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Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 1344934 - 1345009
Alignment:
Q  262 ccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||| |||||||||||  |||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  1344934 ccatttggggttgacctagtggttggt--gggatcttggagtttgttcctccagaggtctcaggttcgattccctctg 1345009  T

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Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 14212885 - 14212966
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| |||||||| ||||| || ||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  14212885 taactcatttgggattgacctaatggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 14212966  T

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Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 654349 - 654269
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| ||| | |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  654349 aacccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 654269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 21148714 - 21148634
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||| |||| | |||||||||| ||||||||||||||||||||  ||||||||||||| ||||||||| ||||    
T  21148714 taacccatttggagttggcctagtggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccctct 21148634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 21982521 - 21982449
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||||| | |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||    
T  21982521 cccatttggggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattc 21982449  T

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Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 33718661 - 33718581
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||| ||||||   |||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||    
T  33718661 aacccatttagggttggtctagtggttggtttgggatcttggagtttacttctccagagatctcaggttcgattctctctg 33718581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 9843929 - 9844003
Alignment:
Q  256 tttaacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcga 330  Q
    ||||| |||||||||||||   |||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9843929 tttaatccatttggggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcga 9844003  T

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Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 28672060 - 28672141
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||| | |||||||||  ||| |||||||||||||||||||  |||||||| ||||||||||| |||||    
T  28672060 taacccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccctctg 28672141  T

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Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 9208245 - 9208320
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    |||||||||||||||||   |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  9208245 taacccatttggggttgttctagtggttggattgggatcttggagtttgctcctctca-aggtctcaggttcgattc 9208320  T

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Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 5360274 - 5360195
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||| |||| | | |||||||| |||||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  5360274 aacccatttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctct 5360195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 9690833 - 9690768
Alignment:
Q  267 tggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||| |||||||||||||| ||| ||||||||||||| | ||||||||| ||||||||||    
T  9690833 tggggttgacctagtggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatt 9690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 28968222 - 28968166
Alignment:
Q  282 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  28968222 ggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattctctct 28968166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 33499467 - 33499537
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttc 328  Q
    ||||||||||||||||| | | |||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  33499467 taacccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctca-aggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 17149637 - 17149579
Alignment:
Q  281 tggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||    
T  17149637 tggttggtttgggatcttggagtgtgctcctctca-aggtctcaggttcgattccctctg 17149579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 17081238 - 17081177
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||| || |||||||||||||||||||| |||| |||||| ||| ||||| |||||    
T  17081238 tagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccctctg 17081177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 17706489 - 17706436
Alignment:
Q  280 gtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||  ||||||||||||||||||||||| |||| |||||| |||||||||    
T  17706489 gtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattc 17706436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 11840915 - 11840975
Alignment:
Q  279 agtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||| ||||||| || || ||||||||| ||||||||||||| ||||||| |||||    
T  11840915 agtggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccctctg 11840975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 8479308 - 8479358
Alignment:
Q  261 cccatttggggttgacatagtggttggtttgggatcttggagtttgctcct 311  Q
    |||||||||||||| | |||||||||  ||||||||||||||| |||||||    
T  8479308 cccatttggggttggcctagtggttgacttgggatcttggagtgtgctcct 8479358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 6556395 - 6556334
Alignment:
Q  242 aaaataaagttgcatttaacccatttggggttgacatagtggttggtttgggatcttggagt 303  Q
    |||||||| |||  ||||||| |||| ||||||| ||| |||||||||| ||||||||||||    
T  6556395 aaaataaatttgactttaacctatttagggttgatataatggttggtttcggatcttggagt 6556334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 1255 - 1179
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 5285 - 5205
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  5285 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 5205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 57; Significance: 9e-24; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 9498 - 9422
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 9422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 12199 - 12130
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 41848 - 41768
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    ||||||||||||||||| | |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  41848 taacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctct 41768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 10892 - 10823
Alignment:
Q  263 catttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10823  T

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Target: scaffold0328 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 14985 - 15065
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | ||||||||||  |||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccctctg 15065  T

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Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 97569 - 97489
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||| | |||||||||| ||||||||||| ||||||||||| || |||||||||||||||||| |||||    
T  97569 aacccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctg 97489  T

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Target: scaffold0460 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 8382 - 8302
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||||||||   |||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  8382 aacccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 8302  T

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Target: scaffold0051 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 53073 - 52994
Alignment:
Q  260 acccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  53073 acccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctg 52994  T

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Target: scaffold0217 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 7512 - 7438
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||| ||||||||||| | |||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  7512 aacctatttggggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattc 7438  T

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Target: scaffold0019 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 161828 - 161883
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 161883  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 66756 - 66830
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattc 333  Q
    |||||||||||| |||   |||||||||| ||||||||||||||||||||||| || |||||||| |||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattc 66830  T

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Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 278 - 338
Target Start/End: Complemental strand, 142 - 82
Alignment:
Q  278 tagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||| ||||    
T  142 tagtggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccctct 82  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 27770 - 27844
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctcct-tcagaggtctcaggttcgattc 333  Q
    ||||||||||||||||   |||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||    
T  27770 aacccatttggggttggtctagtggttggtttgggattttggagtttgctcctctca-aggtctcgggttcgattc 27844  T

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Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 12958 - 12884
Alignment:
Q  258 taacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 332  Q
    ||||| ||||||| ||| | |||||||||  |||||||||||||||| |||||| ||||| ||||||||||||||    
T  12958 taacctatttgggattggcctagtggttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

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Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 20246 - 20296
Alignment:
Q  289 ttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 339  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctg 20296  T

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Target: scaffold0200 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 26746 - 26667
Alignment:
Q  259 aacccatttggggttgacatagtggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattctctct 338  Q
    |||||||||||||||| | || ||||||| || |||||||||||||||||  |  |||||||||| ||| ||||||||||    
T  26746 aacccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattctctct 26667  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 11554 - 11610
Alignment:
Q  284 ttggtttgggatcttggagtttgctccttca-gaggtctcaggttcgattctctctg 339  Q
    |||| ||||||||| ||||| ||||||| |  |||||||||||||||||||||||||    
T  11554 ttggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 49532 - 49476
Alignment:
Q  283 gttggtttgggatcttggagtttgctccttcaga-ggtctcaggttcgattctctct 338  Q
    |||||||| |||||||||||| |||||||||  | ||||||| ||||||||||||||    
T  49532 gttggtttaggatcttggagtgtgctccttcgtatggtctcaagttcgattctctct 49476  T

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