View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1244_high_13 (Length: 421)

Name: NF1244_high_13
Description: NF1244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1244_high_13
NF1244_high_13
[»] chr5 (43 HSPs)
chr5 (59-223)||(30731498-30731662)
chr5 (59-223)||(42514512-42514676)
chr5 (59-223)||(23239175-23239339)
chr5 (59-223)||(28534860-28535024)
chr5 (62-223)||(27796276-27796437)
chr5 (59-228)||(36256562-36256731)
chr5 (77-223)||(33170450-33170596)
chr5 (62-223)||(22094436-22094597)
chr5 (122-223)||(35983038-35983139)
chr5 (62-216)||(30509210-30509364)
chr5 (62-216)||(30549553-30549707)
chr5 (342-409)||(8950626-8950693)
chr5 (74-212)||(25856638-25856776)
chr5 (71-223)||(38358259-38358412)
chr5 (59-216)||(6050039-6050196)
chr5 (59-216)||(20207904-20208061)
chr5 (82-223)||(29572077-29572218)
chr5 (82-223)||(29573454-29573595)
chr5 (82-223)||(29574831-29574972)
chr5 (82-223)||(29576208-29576349)
chr5 (82-223)||(29577585-29577726)
chr5 (82-223)||(29578962-29579103)
chr5 (62-223)||(35121875-35122036)
chr5 (71-230)||(1821254-1821412)
chr5 (77-223)||(19506790-19506936)
chr5 (71-201)||(33385169-33385299)
chr5 (74-223)||(8299382-8299530)
chr5 (149-230)||(26261592-26261673)
chr5 (166-223)||(10780993-10781050)
chr5 (68-225)||(31865087-31865244)
chr5 (169-213)||(6885715-6885759)
chr5 (123-190)||(19838390-19838457)
chr5 (116-230)||(588292-588406)
chr5 (140-214)||(21084682-21084756)
chr5 (164-228)||(22174285-22174347)
chr5 (164-216)||(42260081-42260133)
chr5 (77-204)||(380712-380839)
chr5 (75-214)||(4297509-4297648)
chr5 (135-214)||(41590890-41590969)
chr5 (168-223)||(34481740-34481795)
chr5 (164-214)||(10486191-10486241)
chr5 (166-212)||(22438021-22438067)
chr5 (177-230)||(40035957-40036010)
[»] scaffold0034 (1 HSPs)
scaffold0034 (59-223)||(105027-105191)
[»] chr7 (38 HSPs)
chr7 (59-223)||(4937312-4937476)
chr7 (59-223)||(29968766-29968930)
chr7 (90-223)||(11276463-11276596)
chr7 (59-223)||(17721427-17721591)
chr7 (252-349)||(17503936-17504033)
chr7 (252-349)||(17549181-17549278)
chr7 (59-228)||(45164731-45164900)
chr7 (131-229)||(6335648-6335746)
chr7 (59-216)||(34232500-34232657)
chr7 (59-210)||(13440863-13441014)
chr7 (62-211)||(45993380-45993529)
chr7 (71-223)||(18768200-18768352)
chr7 (159-223)||(19735310-19735374)
chr7 (153-223)||(36227429-36227499)
chr7 (162-223)||(23054257-23054318)
chr7 (98-207)||(27218345-27218454)
chr7 (76-221)||(33820760-33820905)
chr7 (66-223)||(41340341-41340498)
chr7 (166-234)||(29917001-29917069)
chr7 (166-217)||(39930887-39930938)
chr7 (128-223)||(46626614-46626709)
chr7 (164-213)||(4078079-4078128)
chr7 (114-235)||(4164819-4164940)
chr7 (114-235)||(34207110-34207231)
chr7 (110-205)||(22818952-22819047)
chr7 (165-223)||(18671963-18672021)
chr7 (175-223)||(31423386-31423434)
chr7 (68-196)||(43572360-43572488)
chr7 (251-330)||(45164935-45165014)
chr7 (149-223)||(45871555-45871629)
chr7 (166-223)||(2820012-2820069)
chr7 (77-214)||(41804961-41805098)
chr7 (114-210)||(17056334-17056430)
chr7 (164-204)||(34791964-34792004)
chr7 (159-235)||(37942138-37942214)
chr7 (135-214)||(25018562-25018641)
chr7 (165-223)||(28173273-28173331)
chr7 (164-208)||(28740224-28740268)
[»] chr4 (42 HSPs)
chr4 (59-223)||(23641775-23641939)
chr4 (59-223)||(23647433-23647597)
chr4 (59-223)||(47419596-47419760)
chr4 (59-223)||(19756059-19756223)
chr4 (59-223)||(19783583-19783747)
chr4 (59-223)||(1827724-1827888)
chr4 (62-223)||(48312886-48313047)
chr4 (59-210)||(55299426-55299577)
chr4 (59-228)||(40688867-40689037)
chr4 (71-223)||(19733184-19733336)
chr4 (59-210)||(23872661-23872812)
chr4 (68-223)||(29552994-29553149)
chr4 (59-223)||(20675827-20675991)
chr4 (71-223)||(55724903-55725055)
chr4 (74-228)||(19162368-19162522)
chr4 (59-223)||(34976733-34976897)
chr4 (140-228)||(43516013-43516101)
chr4 (68-223)||(19115228-19115383)
chr4 (68-223)||(26694720-26694875)
chr4 (152-223)||(42952808-42952879)
chr4 (75-228)||(2365793-2365945)
chr4 (62-207)||(19648503-19648648)
chr4 (62-221)||(8935868-8936027)
chr4 (165-216)||(20396381-20396432)
chr4 (165-216)||(42779049-42779100)
chr4 (164-223)||(54482449-54482508)
chr4 (165-214)||(10562614-10562663)
chr4 (128-223)||(7662561-7662656)
chr4 (252-338)||(40688743-40688829)
chr4 (192-235)||(7099260-7099303)
chr4 (172-223)||(15741012-15741063)
chr4 (89-216)||(53486143-53486270)
chr4 (83-213)||(29327989-29328119)
chr4 (162-228)||(38296492-38296558)
chr4 (85-202)||(55464091-55464208)
chr4 (59-223)||(11586367-11586531)
chr4 (77-211)||(9691227-9691361)
chr4 (122-228)||(19308834-19308940)
chr4 (166-212)||(2072343-2072389)
chr4 (59-105)||(54685316-54685362)
chr4 (122-235)||(19837915-19838028)
chr4 (164-204)||(3129265-3129305)
[»] chr3 (52 HSPs)
chr3 (59-223)||(2365070-2365234)
chr3 (59-223)||(34331999-34332163)
chr3 (59-223)||(19919413-19919577)
chr3 (62-223)||(48569210-48569371)
chr3 (77-223)||(962365-962511)
chr3 (59-228)||(11757689-11757856)
chr3 (62-223)||(17077484-17077645)
chr3 (59-223)||(6175661-6175825)
chr3 (71-223)||(19891469-19891621)
chr3 (68-223)||(23819357-23819512)
chr3 (77-228)||(40512926-40513077)
chr3 (62-223)||(16179732-16179893)
chr3 (59-207)||(19876051-19876199)
chr3 (68-223)||(24925878-24926033)
chr3 (77-228)||(31675718-31675869)
chr3 (82-228)||(8130760-8130906)
chr3 (68-223)||(36709701-36709856)
chr3 (68-223)||(43120867-43121022)
chr3 (77-223)||(14863658-14863804)
chr3 (77-223)||(21739690-21739836)
chr3 (69-223)||(46907864-46908018)
chr3 (83-223)||(12341463-12341603)
chr3 (77-228)||(34830179-34830331)
chr3 (131-223)||(52907298-52907390)
chr3 (77-228)||(31920554-31920705)
chr3 (84-223)||(50545035-50545174)
chr3 (162-232)||(18381831-18381901)
chr3 (75-205)||(22733671-22733801)
chr3 (166-223)||(15481049-15481106)
chr3 (128-223)||(30166576-30166671)
chr3 (68-223)||(42674631-42674786)
chr3 (149-223)||(36731685-36731759)
chr3 (77-223)||(55367401-55367547)
chr3 (74-195)||(25785830-25785951)
chr3 (149-213)||(47538069-47538133)
chr3 (159-222)||(10868437-10868500)
chr3 (166-228)||(53942033-53942095)
chr3 (162-214)||(52250412-52250464)
chr3 (75-214)||(6825613-6825752)
chr3 (135-214)||(16672281-16672360)
chr3 (77-228)||(17270944-17271095)
chr3 (166-223)||(22734014-22734071)
chr3 (114-210)||(44888709-44888805)
chr3 (166-204)||(1709645-1709683)
chr3 (166-216)||(25388163-25388213)
chr3 (296-338)||(31675608-31675650)
chr3 (164-214)||(48930527-48930577)
chr3 (170-214)||(7164289-7164333)
chr3 (116-204)||(8948260-8948348)
chr3 (166-234)||(11584859-11584927)
chr3 (164-204)||(20797918-20797958)
chr3 (176-228)||(53504529-53504581)
[»] chr1 (33 HSPs)
chr1 (59-223)||(6051395-6051559)
chr1 (76-195)||(51052701-51052820)
chr1 (59-223)||(35541826-35541990)
chr1 (59-235)||(47622261-47622437)
chr1 (59-210)||(5497891-5498042)
chr1 (59-210)||(32352496-32352647)
chr1 (59-210)||(48072610-48072761)
chr1 (62-223)||(20796452-20796613)
chr1 (68-214)||(17708859-17709005)
chr1 (59-216)||(26721432-26721589)
chr1 (62-223)||(39431078-39431239)
chr1 (62-211)||(25504179-25504328)
chr1 (76-228)||(28358678-28358830)
chr1 (77-228)||(13867042-13867193)
chr1 (68-223)||(49264158-49264313)
chr1 (143-209)||(5809387-5809453)
chr1 (83-228)||(3544309-3544454)
chr1 (165-223)||(7396010-7396068)
chr1 (59-216)||(10710388-10710544)
chr1 (131-212)||(19042926-19043007)
chr1 (166-228)||(19014274-19014336)
chr1 (128-234)||(32642652-32642758)
chr1 (166-211)||(3074548-3074593)
chr1 (114-210)||(22191021-22191117)
chr1 (164-228)||(33259991-33260055)
chr1 (164-228)||(33280150-33280214)
chr1 (131-223)||(48434942-48435034)
chr1 (162-228)||(20987942-20988008)
chr1 (164-214)||(45271042-45271092)
chr1 (114-210)||(21409046-21409142)
chr1 (77-228)||(1247788-1247939)
chr1 (176-228)||(14975993-14976045)
chr1 (164-204)||(30650308-30650348)
[»] chr8 (45 HSPs)
chr8 (59-223)||(41664552-41664716)
chr8 (59-223)||(7925178-7925342)
chr8 (59-223)||(32267346-32267510)
chr8 (63-223)||(8300595-8300755)
chr8 (59-223)||(9923393-9923557)
chr8 (62-223)||(13878674-13878835)
chr8 (60-216)||(10530459-10530615)
chr8 (68-223)||(23942879-23943034)
chr8 (77-228)||(26774449-26774600)
chr8 (68-223)||(43612378-43612533)
chr8 (71-223)||(14345116-14345268)
chr8 (66-223)||(6901729-6901887)
chr8 (77-223)||(29721113-29721259)
chr8 (59-223)||(16375287-16375451)
chr8 (74-223)||(20825091-20825241)
chr8 (68-216)||(17659640-17659788)
chr8 (71-223)||(17700272-17700424)
chr8 (152-223)||(24794512-24794583)
chr8 (164-223)||(36157946-36158005)
chr8 (153-223)||(7453144-7453214)
chr8 (62-207)||(4987252-4987397)
chr8 (77-214)||(12332649-12332786)
chr8 (152-223)||(11393608-11393679)
chr8 (75-214)||(36493182-36493321)
chr8 (85-216)||(42176767-42176898)
chr8 (69-216)||(45255034-45255181)
chr8 (75-205)||(5585751-5585881)
chr8 (143-208)||(6245891-6245956)
chr8 (166-223)||(12135015-12135072)
chr8 (77-228)||(25193875-25194026)
chr8 (176-216)||(36025320-36025360)
chr8 (68-216)||(43611384-43611532)
chr8 (166-216)||(28992510-28992560)
chr8 (166-223)||(5585481-5585538)
chr8 (122-235)||(41691007-41691120)
chr8 (165-213)||(18187947-18187995)
chr8 (251-350)||(7453017-7453116)
chr8 (176-223)||(8445605-8445652)
chr8 (185-228)||(37165431-37165474)
chr8 (166-228)||(4991987-4992049)
chr8 (114-228)||(16839115-16839229)
chr8 (164-221)||(12341361-12341418)
chr8 (135-204)||(15539868-15539937)
chr8 (68-100)||(12135136-12135168)
chr8 (171-223)||(43249100-43249152)
[»] chr6 (41 HSPs)
chr6 (59-223)||(2554397-2554561)
chr6 (59-216)||(24766608-24766755)
chr6 (59-223)||(26206125-26206289)
chr6 (74-235)||(12673318-12673479)
chr6 (77-223)||(13938510-13938656)
chr6 (59-223)||(15674624-15674788)
chr6 (59-223)||(15956160-15956324)
chr6 (71-223)||(18681770-18681922)
chr6 (68-216)||(11060055-11060203)
chr6 (71-223)||(17605530-17605682)
chr6 (83-222)||(21629330-21629469)
chr6 (74-223)||(17576916-17577065)
chr6 (68-216)||(649266-649414)
chr6 (74-212)||(18589140-18589276)
chr6 (89-207)||(19350752-19350870)
chr6 (59-223)||(13086335-13086499)
chr6 (77-211)||(14686210-14686344)
chr6 (59-216)||(17078251-17078408)
chr6 (251-338)||(7956048-7956134)
chr6 (69-223)||(21549639-21549792)
chr6 (83-228)||(14843345-14843490)
chr6 (114-234)||(1307906-1308026)
chr6 (164-228)||(25351010-25351074)
chr6 (176-223)||(11469365-11469412)
chr6 (164-221)||(13563219-13563276)
chr6 (62-207)||(33640725-33640870)
chr6 (164-211)||(502821-502868)
chr6 (165-212)||(1104237-1104284)
chr6 (177-235)||(14372293-14372351)
chr6 (87-228)||(26514512-26514653)
chr6 (251-339)||(502908-502996)
chr6 (164-228)||(12687041-12687105)
chr6 (177-233)||(28575763-28575819)
chr6 (76-216)||(32186482-32186622)
chr6 (59-114)||(7955893-7955948)
chr6 (102-189)||(10362972-10363059)
chr6 (164-223)||(33753460-33753519)
chr6 (166-228)||(20497673-20497735)
chr6 (164-233)||(19616168-19616237)
chr6 (164-204)||(27104141-27104181)
chr6 (164-204)||(27145955-27145995)
[»] scaffold0472 (1 HSPs)
scaffold0472 (59-223)||(4044-4208)
[»] chr2 (33 HSPs)
chr2 (59-234)||(44028397-44028572)
chr2 (59-223)||(13551374-13551538)
chr2 (71-216)||(33515389-33515534)
chr2 (60-235)||(28253509-28253684)
chr2 (59-228)||(13416473-13416642)
chr2 (71-223)||(12646342-12646494)
chr2 (71-223)||(28399746-28399898)
chr2 (68-223)||(8065454-8065609)
chr2 (74-216)||(2207021-2207163)
chr2 (59-228)||(6724816-6724985)
chr2 (77-213)||(20004747-20004883)
chr2 (68-223)||(35488630-35488785)
chr2 (164-223)||(15018469-15018528)
chr2 (128-223)||(45422312-45422407)
chr2 (62-223)||(11233676-11233837)
chr2 (71-228)||(32191843-32192000)
chr2 (76-216)||(33583629-33583769)
chr2 (168-223)||(25380687-25380742)
chr2 (252-339)||(44028597-44028684)
chr2 (114-235)||(3153058-3153179)
chr2 (62-223)||(9668193-9668354)
chr2 (135-214)||(26147016-26147095)
chr2 (146-223)||(14440536-14440613)
chr2 (162-214)||(43311060-43311112)
chr2 (114-204)||(6824222-6824310)
chr2 (160-221)||(34357602-34357663)
chr2 (164-228)||(10289355-10289419)
chr2 (119-210)||(18669461-18669552)
chr2 (166-228)||(39116308-39116370)
chr2 (170-216)||(43722321-43722367)
chr2 (250-287)||(6787748-6787785)
chr2 (165-222)||(22724729-22724786)
chr2 (176-228)||(45717939-45717991)
[»] scaffold1350 (1 HSPs)
scaffold1350 (62-223)||(336-497)
[»] scaffold0007 (1 HSPs)
scaffold0007 (59-216)||(182914-183071)
[»] scaffold0179 (2 HSPs)
scaffold0179 (59-216)||(8331-8488)
scaffold0179 (59-216)||(13265-13422)
[»] scaffold1809 (1 HSPs)
scaffold1809 (168-235)||(1093-1160)
[»] scaffold0112 (1 HSPs)
scaffold0112 (162-223)||(14948-15009)
[»] scaffold0418 (1 HSPs)
scaffold0418 (128-223)||(8396-8491)
[»] scaffold0016 (1 HSPs)
scaffold0016 (135-214)||(28575-28654)
[»] scaffold0048 (1 HSPs)
scaffold0048 (164-228)||(63589-63653)
[»] scaffold0131 (1 HSPs)
scaffold0131 (164-214)||(3837-3887)
[»] scaffold0189 (1 HSPs)
scaffold0189 (76-204)||(6902-7030)
[»] scaffold0061 (1 HSPs)
scaffold0061 (162-214)||(55466-55518)
[»] scaffold0017 (1 HSPs)
scaffold0017 (162-214)||(143115-143167)
[»] scaffold0026 (1 HSPs)
scaffold0026 (177-223)||(67872-67918)


Alignment Details
Target: chr5 (Bit Score: 141; Significance: 8e-74; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 30731498 - 30731662
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30731498 gaacctgtggtggatcgtattaaatctagattgtctggttggaaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 30731597  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  30731598 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 30731662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 42514676 - 42514512
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  42514676 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 42514577  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  42514576 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 42514512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 23239339 - 23239175
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  23239339 gaacctgttgtgaatcgtactaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgttcgattcttctaaagtccgtcctgactg 23239240  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  23239239 ctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 23239175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 28534860 - 28535024
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || ||||||||||||  ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  28534860 gaacctgttgttaatcgtattaaaaatagattgtcaggttggcaaagtcggttcctttcttttggtggtcgtttgattcttcttaagtccgtcctgactg 28534959  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  28534960 ctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 28535024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 27796437 - 27796276
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || |||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||| | ||||| || || | ||||||||||||      
T  27796437 cctgttgttaatcgtattaaaactagattgtctggttggcatagtcggttcctttcttttggtggtcgtctaattcttctcaaattcgtcctgactgcac 27796338  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  27796337 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 27796276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 36256731 - 36256562
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    ||||||||||| || ||||| ||||||||| ||||| |||||||||||||||| || ||||| || ||||| ||||||||  ||||||| ||| |||| |    
T  36256731 gaacctgtggttaaccgtataaaatctagactgtctagttggcaaagtcggtttctttcttttggaggtcgcttgattcttttaaagtctgtcttgaccg 36256632  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |  ||||||||||||| |||||||||||||| |||||| |||||  ||||||||||||||| ||| ||||    
T  36256631 cgctacctgtctatgctctttccttcttcaaggctccaacaggtgcaatctcttccatagattctatttt 36256562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 33170596 - 33170450
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| ||||  || ||||| || || || |  |||||||||||  ||||||||||||| |    
T  33170596 attaaagctagattgtctggttggcatagtcggttcctttcttttggtgaccggttgatccttctcaaatttgtcctgactgcactacctgtctatgctc 33170497  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  33170496 tttcctttttcaaagctccgtcaggtataatctattccattgaatct 33170450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 22094436 - 22094597
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||||||||| ||||| |||| |||||| | ||||| ||||| ||||| ||||| | |||| |||| || ||  | ||| ||||| |||    
T  22094436 cctgttgtgaatcgtattaaagctagactgtcgggttggaatagtcgtttcctctcttttggtggccatttggttcttctcaaagctgtcttgacttctt 22094535  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  22094536 tgcctgtctatgctctttccttcttcaaagctccgtcaggtataatctctgccattgaatct 22094597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 35983038 - 35983139
Alignment:
Q  122 ggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    ||||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||| |||||| ||||    
T  35983038 ggtggtcgtttgattcttcttaagtctgtcctgactgctctacctgtctatgcactttcctttttcaaagctctgtcaggtataatcttttccattgaat 35983137  T
Q  222 ct 223  Q
    ||    
T  35983138 ct 35983139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 30509210 - 30509364
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||||||||||||||||||||||| || ||| | || ||||| || ||||| |||||||| ||||| || || ||  ||||  ||||| ||     
T  30509210 cctgtcgtgaatcgtattaaatctagattgtcggggtggaatagccggtttctctcttttggtggtcgcttgatccttctgaaagccgtgttgacttctc 30509309  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    | ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  30509310 tgcctgtctatgctctttccttctttaaagctccaacaggtataatctcttccat 30509364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 30549553 - 30549707
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||||||||||||||||||||||| || ||| | || ||||| || ||||| |||||||| ||||| || || ||  ||||  ||||| ||     
T  30549553 cctgtcgtgaatcgtattaaatctagattgtcggggtggaatagccggtttctctcttttggtggtcgcttgatccttctgaaagccgtgttgacttctc 30549652  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    | ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  30549653 tgcctgtctatgctctttccttctttaaagctccaacaggtataatctcttccat 30549707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 8950626 - 8950693
Alignment:
Q  342 tttttaatataatcaatatgtatatggcctttaaaaacaaaaacttatatggcttaaatattattgga 409  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8950626 tttttaatataatcaatatttatatggcctttaaaaacaaaaatttatatggcttaaatattattgga 8950693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 25856638 - 25856776
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| || |||||||||||||||||||| ||| ||| ||| || || |||||||| |||||||| || || || ||| | |||||  | ||||||||||    
T  25856638 cgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgattctgctcaaatctgtcttaactgcgattcctgtctatg 25856737  T
Q  174 cactttccttcttcaaagctccatcaggtataatctctt 212  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  25856738 cactttcctttttcaaagctccgtcaggtataatctctt 25856776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 38358412 - 38358259
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttc-ggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtc 169  Q
    ||||| |||||||||||| |||| |||||| | ||| |||| || |||||  ||||||||||||| ||| ||||| || || |||||  || | ||||||    
T  38358412 aatcgcattaaatctagactgtcgggttggaatagtaggtttctctctttttggtggtcgtttgactctcctaaaatcagttctgacatctctgcctgtc 38358313  T
Q  170 tatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  38358312 tatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatct 38358259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 6050196 - 6050039
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||| | || || ||||||||| | ||||| ||| ||||||| ||||| | | || ||||  ||||||| || |||||      
T  6050196 gaacctatcgtgaatcgtattaaagcaaggttatctggttggaatagtcgtttcttatcttttggtggccatctggttcttttaaagtctgttctgacct 6050097  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |  | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  6050096 cgctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatatcttccat 6050039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 20207904 - 20208061
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||| |||||| |||| |||||||||||| | ||||| ||  ||||||  || || ||| || ||||  ||||||| ||||| ||      
T  20207904 gaacctattgtgaatcgcattaaaactaggttgtctggttggaatagtcgttttttatcttatggcggccgtctggttcttttaaagtctgtcctaacct 20208003  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || | ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20208004 ctctgcctgtctatgcgctttccttcttcaaagctccatcatgtataatctcttccat 20208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 29572077 - 29572218
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||||||||||||||| ||||||| ||| | |||||||| || ||||||| | | || || || || |||||  || | ||||||||||||||||||    
T  29572077 atctagattgtctggttggaaaagtcgtttcttttctttcgggggccgtttgactttgcttaaatctgttctgacctctctgcctgtctatgcactttcc 29572176  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||  ||| |||||||||||||| | ||||||    
T  29572177 ttcttcaaagctctgtcaagtataatctcttcctttgaatct 29572218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 29573454 - 29573595
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||||||||||||||| ||||||| ||| | |||||||| || ||||||| | | || || || || |||||  || | ||||||||||||||||||    
T  29573454 atctagattgtctggttggaaaagtcgtttcttttctttcgggggccgtttgactttgcttaaatctgttctgacctctctgcctgtctatgcactttcc 29573553  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||  ||| |||||||||||||| | ||||||    
T  29573554 ttcttcaaagctctgtcaagtataatctcttcctttgaatct 29573595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 29574831 - 29574972
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||||||||||||||| ||||||| ||| | |||||||| || ||||||| | | || || || || |||||  || | ||||||||||||||||||    
T  29574831 atctagattgtctggttggaaaagtcgtttcttttctttcgggggccgtttgactttgcttaaatctgttctgacctctctgcctgtctatgcactttcc 29574930  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||  ||| |||||||||||||| | ||||||    
T  29574931 ttcttcaaagctctgtcaagtataatctcttcctttgaatct 29574972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 29576208 - 29576349
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||||||||||||||| ||||||| ||| | |||||||| || ||||||| | | || || || || |||||  || | ||||||||||||||||||    
T  29576208 atctagattgtctggttggaaaagtcgtttcttttctttcgggggccgtttgactttgcttaaatctgttctgacctctctgcctgtctatgcactttcc 29576307  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||  ||| |||||||||||||| | ||||||    
T  29576308 ttcttcaaagctctgtcaagtataatctcttcctttgaatct 29576349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 29577585 - 29577726
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||||||||||||||| ||||||| ||| | |||||||| || ||||||| | | || || || || |||||  || | ||||||||||||||||||    
T  29577585 atctagattgtctggttggaaaagtcgtttcttttctttcgggggccgtttgactttgcttaaatctgttctgacctctctgcctgtctatgcactttcc 29577684  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||  ||| |||||||||||||| | ||||||    
T  29577685 ttcttcaaagctctgtcaagtataatctcttcctttgaatct 29577726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 29578962 - 29579103
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||||||||||||||| ||||||| ||| | |||||||| || ||||||| | | || || || || |||||  || | ||||||||||||||||||    
T  29578962 atctagattgtctggttggaaaagtcgtttcttttctttcgggggccgtttgactttgcttaaatctgttctgacctctctgcctgtctatgcactttcc 29579061  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||  ||| |||||||||||||| | ||||||    
T  29579062 ttcttcaaagctctgtcaagtataatctcttcctttgaatct 29579103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 35121875 - 35122036
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||| |||||||||||||| |||| || ||  | || || || || || || |||||||| |||||||| ||||| || ||  ||||| ||     
T  35121875 cctgttgtgaatagtattaaatctagactgtcgggatgcaatagccgatttctctcgtttggtggtcgcttgattctcctaaaatcagttttgacttctc 35121974  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  35121975 tgcctgtctatgctctttccttctttaaagctccttcaggtataatctcttccattgaatct 35122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 1821412 - 1821254
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||||||| |||||||||||||||||||||   |||| || || ||||||||||| |||||||| || ||||  ||| |||||||| |  ||||||    
T  1821412 aatcgtattaaaactagattgtctggttggcaaaaatggtttctttccttcggtggtcgcttgattcttcttaagtttgtcatgactgctctgtctgtct 1821313  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttga 230  Q
    ||||  ||   |||||||| | | ||||| |||||||||||||||| |||||||||||||    
T  1821312 atgc-tttgtattcttcaaggtttcatcaagtataatctcttccattgaatctcttttga 1821254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 19506936 - 19506790
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||| |||| |||||| | || |||||  |||| ||||||||||| ||  ||||  | ||  | || |||||| |||| | ||||||||| |    
T  19506936 attaaatctagactgtcaggttggaatagccggtttttatcgttcggtggtcgcttagttctcttgaaagcagttctgacttctttgcttgtctatgctc 19506837  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  19506836 tttccttctttaaagctccatcaggtataatctcttccattgaatct 19506790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 33385169 - 33385299
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||| || |||||||||||||||||||| ||| ||| ||| || || |||||||| ||||| || || || || ||| |||||||  | |||||||    
T  33385169 aatcgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtct 33385268  T
Q  171 atgcactttccttcttcaaagctccatcagg 201  Q
    ||||||||||||| ||||||||||| |||||    
T  33385269 atgcactttcctttttcaaagctccgtcagg 33385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 8299382 - 8299530
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| || |||||||||||||||||||| ||| ||| ||| || || |||||||| ||||| || || || |  ||| | |||||  | ||||||||||    
T  8299382 cgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgat-ctgctcaaatttgtcttaactgcgattcctgtctatg 8299480  T
Q  174 cactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||| ||||||||||| ||||||||||||||||| || ||||||    
T  8299481 cactttcctttttcaaagctccgtcaggtataatctcttctattgaatct 8299530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 26261592 - 26261673
Alignment:
Q  149 gtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttga 230  Q
    ||||||||| || || |||||||||| |||||||||||||||||||| ||||||||||||||||| || |||| | ||||||    
T  26261592 gtcctgacttctctatctgtctatgctctttccttcttcaaagctccttcaggtataatctcttctattgaatttattttga 26261673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 10781050 - 10780993
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||    
T  10781050 tgtctatgcactttcctttttcaaagctccgtcaggtataatctcttctattgaatct 10780993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 31865244 - 31865087
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||||||||||||||| ||||| |||||| |||| || || || ||||| || || || ||| ||||||| || ||  | |||||  ||||  |||    
T  31865244 gtgaatcgtattaaatctaggttgtcgggttggaaaagccgatttctctcttttggaggccgcttggttctacttaaatctattctgacctctttgtctg 31865145  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctct 225  Q
    |||||||  |||||||||||| | |||||| || || |||||||||||| ||||||||    
T  31865144 tctatgctttttccttcttcagaactccataagttaaaatctcttccattgaatctct 31865087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 6885759 - 6885715
Alignment:
Q  169 ctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  6885759 ctatgctctttccttcttcaaagctccatcaggtataatctcttc 6885715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 19838457 - 19838390
Alignment:
Q  123 gtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaa 190  Q
    |||||||||||||||| || ||||| ||||||||| |||| ||||||||||  |||||||||||||||    
T  19838457 gtggtcgtttgattcttctcaagtctgtcctgacttctttgcctgtctatgttctttccttcttcaaa 19838390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 588406 - 588292
Alignment:
Q  116 tctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcca 215  Q
    ||||||||||| || ||| | || ||||| || ||| ||||  || | ||||||||||| ||||  |||||||||||||||| | |||||||||||||||    
T  588406 tctttcggtggccgcttggtacttctaaaatctgtcttgacctctctgcctgtctatgctctttgtttcttcaaagctccattatgtataatctcttcca 588307  T
Q  216 tagaatctcttttga 230  Q
    | |||||||| ||||    
T  588306 ttgaatctctattga 588292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 21084756 - 21084682
Alignment:
Q  140 ctaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||||||| ||| ||||  || ||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  21084756 ctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcc 21084682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 22174285 - 22174347
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||||||  |||| |||||||| | |||||||||||||||||||||||| |||||||||||    
T  22174285 cctgtctatgc--tttctttcttcaaggttccatcaggtataatctcttccattgaatctctttt 22174347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 42260133 - 42260081
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||| || ||||||||||||||||||||||||| |||||||| ||||||    
T  42260133 cctgtctacgctctttccttcttcaaagctccatcagatataatcttttccat 42260081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 380839 - 380712
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||| ||||||||||| || ||||||||||| || || |||||  | || || ||| |||| |||||||  ||| ||||  || | | ||||||||| |    
T  380839 attaagtctagattgtcggggtggcaaagtcgttttctctcttttaggggccggttggttcttctaaagtttgtcttgacctctctgcatgtctatgctc 380740  T
Q  177 tttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||||||||| ||||||||||    
T  380739 tttccttcttcaaagcttcatcaggtat 380712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 4297509 - 4297648
Alignment:
Q  75 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgc 174  Q
    |||||||||| |||||||||| ||   | ||||||||  |||| || ||||| || ||  |||| ||||||||  || ||||  || |||||||||||||    
T  4297509 gtattaaatcgagattgtctgatttcaatagtcggtttttatcgtttggtggccggttagttctcctaaagtctatcttgacctctctacctgtctatgc 4297608  T
Q  175 actttccttcttcaaagctccatcaggtataatctcttcc 214  Q
     ||||||||||||||  |||| ||||||||||| ||||||    
T  4297609 tctttccttcttcaagactccgtcaggtataatttcttcc 4297648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 41590969 - 41590890
Alignment:
Q  135 ttctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||| |||||||| ||| ||||  || ||||||||||| | |||||||||||||| ||||| ||||||||||| ||||||    
T  41590969 ttctcctaaagtctgtcttgacctctctacctgtctatactctttccttcttcaaggctccgtcaggtataatttcttcc 41590890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 34481795 - 34481740
Alignment:
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||| ||||||||||||||| |||||||||||||||| || || ||||||    
T  34481795 tctacgcactctccttcttcaaagcttcatcaggtataatctcctctattgaatct 34481740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 10486191 - 10486241
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||||||||||  |||| |||||||||||||||||||||||| | ||||||    
T  10486191 cctgtctatgccatttctttcttcaaagctccatcaggtatactttcttcc 10486241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 22438067 - 22438021
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctctt 212  Q
    |||||||||  |||||||||||| |||||| ||||||||||||||||    
T  22438067 tgtctatgctttttccttcttcatagctccctcaggtataatctctt 22438021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 40035957 - 40036010
Alignment:
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttga 230  Q
    ||||||||||||| ||||| ||| |||||||||| || || |||||||||||||    
T  40035957 tttccttcttcaatgctccctcatgtataatctcctctattgaatctcttttga 40036010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 105027 - 105191
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  105027 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 105126  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  105127 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 105191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 4937312 - 4937476
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  4937312 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 4937411  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  4937412 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 4937476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 29968930 - 29968766
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||    
T  29968930 gaacctgttgtgaaccgtattaaatctagattggctggttggcaaagtcggttcctttccttcggtggccgtttgattcttctaaagtccgtcctgactg 29968831  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  29968830 ctctacctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatct 29968766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 11276463 - 11276596
Alignment:
Q  90 tgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaa 189  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11276463 tgtctggttggcaaagttggttcctttctttcggtggtcgtttgattctcctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaa 11276562  T
Q  190 agctccatcaggtataatctcttccatagaatct 223  Q
    |||||| |||||||||||||||||||| ||||||    
T  11276563 agctccgtcaggtataatctcttccattgaatct 11276596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 17721591 - 17721427
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || ||||| ||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||| |||| || |||| |||||||||||    
T  17721591 gaacctgttgttaatcgcattaaaaatagattgtctggttggcaaagtcggttcctttcttttggtggtcgtttggttcttcttaagttcgtcctgactg 17721492  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  17721491 ctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 17721427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 252 - 349
Target Start/End: Original strand, 17503936 - 17504033
Alignment:
Q  252 gtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttgaatgtttttaat 349  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17503936 gtgaggatcatagaaaaatatcttgggtgggttggaggactatctgtttacgaaaggagtatggtggtttaggcgttagacagttgaatgtttttaat 17504033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 252 - 349
Target Start/End: Complemental strand, 17549278 - 17549181
Alignment:
Q  252 gtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttgaatgtttttaat 349  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17549278 gtgaggatcatagaaaaatatcttgggtgggttggaggactatctgtttacgaaaggagtatggtggtttaggcgttagacagttgaatgtttttaat 17549181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 45164731 - 45164900
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||| |||||| || | |||||||||||||  |||| |||||||||||||||| || || || || ||||| ||||||||  ||||||| ||| |||| |    
T  45164731 gaacatgtggttaaccctattaaatctagaccgtctagttggcaaagtcggtttctttcctttggaggtcgcttgattcttttaaagtctgtcttgaccg 45164830  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |  ||||||||||||| |||||||||||||| |||||| |||||| ||||||||||||||| ||| ||||    
T  45164831 cgctacctgtctatgctctttccttcttcaaggctccagcaggtacaatctcttccatagattctatttt 45164900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 6335648 - 6335746
Alignment:
Q  131 ttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttg 229  Q
    |||||||| |||||||| ||| ||||||| |||||||||||||| |||||||||||||| |||||| || ||| |||||||||||||||||||||||||    
T  6335648 ttgattcttctaaagtctgtcttgactgcgttacctgtctatgctctttccttcttcaaggctccagcatgtacaatctcttccatagaatctcttttg 6335746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 34232657 - 34232500
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||| ||| |||| |||||||||||| | ||||| ||  ||||||| ||||| ||| || ||||  ||||||| || |||||      
T  34232657 gaaccttttgtgaatcgtataaaagctaggttgtctggttggaatagtcgttttttatcttttggtggccgtctggttctgttaaagtctgttctgacct 34232558  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || | | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34232557 ctctgcttgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccat 34232500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 13441014 - 13440863
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | |||||||| || ||||  |||||||| ||| ||||||| || |  ||| ||||      
T  13441014 gaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttgtggtggtcgcttggttctactcaaatatgtcttgacct 13440915  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    || | ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  13440914 ctctgcctgtctatgcgctttccttcttcaaagctccagcaggtataatctc 13440863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 45993529 - 45993380
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||||| || |||||| |||| |||||| | ||||| ||||| ||||| |||||||||||| |||| || || || ||  ||||  ||     
T  45993529 cctgttgtgaatcgtataaagtctagactgtcaggttggaatagtcgtttcctctcttttggtggtcgtttggttcttctcaaatctgtgttgacctctc 45993430  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctct 211  Q
    | ||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  45993429 tgcctgtctatgctctttctttcttcaaagctccgtcaggtataatctct 45993380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 18768352 - 18768200
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    ||||| |||||||||||| |||| ||||||   ||| |||| || ||||| | ||||||||||||||| ||||| ||  | || ||  || | |||||||    
T  18768352 aatcgcattaaatctagactgtcgggttggattagtaggtttctctcttttgttggtcgtttgattctcctaaaatcaattcttacatctctgcctgtct 18768253  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||| ||||||||||||||| || |||||||||||||||| ||||||    
T  18768252 atgctctttctttcttcaaagctccaacaagtataatctcttccattgaatct 18768200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 19735374 - 19735310
Alignment:
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  19735374 ctttgcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 19735310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 36227429 - 36227499
Alignment:
Q  153 tgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  36227429 tgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttccattgaatct 36227499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 23054257 - 23054318
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||    
T  23054257 tacctgtctatgcactttccttctttaaagctctgtcaggtataatctcttccattgaatct 23054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 27218345 - 27218454
Alignment:
Q  98 tggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccat 197  Q
    ||||||||||| || ||||||||||| ||||| ||| |||| || ||||| ||| ||||| |  | | |||||||||||||||||||||||| ||||| |    
T  27218345 tggcaaagtcgttttctatctttcgggggtcgcttggttcttcttaagtctgtcttgacttcgcttcatgtctatgcactttccttcttcaaggctccgt 27218444  T
Q  198 caggtataat 207  Q
    ||||||||||    
T  27218445 caggtataat 27218454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 33820760 - 33820905
Alignment:
Q  76 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    |||||| |||||||||||  | |||||||  || || |||||||| |  ||||| |||||||| || || || ||||||||  || | ||| ||||||      
T  33820760 tattaagtctagattgtcgagatggcaaaaccgttttctatcttttgcgggtcggttgattcttctcaattctgtcctgacctctctgcctatctatgtt 33820859  T
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  33820860 ctttccttcttcaaagctccatcaggtattatctcttccattgaat 33820905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 41340498 - 41340341
Alignment:
Q  66 tggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacc 165  Q
    |||||||||| ||||||||||||||||| |||||  | || || || || || || |||||||| ||||| || || || || || |||||| || |       
T  41340498 tggtgaatcgcattaaatctagattgtcgggttgaaatagccgatttctctcctttggtggtcgcttgatcctccttaaatcggttctgacttctctgta 41340399  T
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||    
T  41340398 tgtctatgccctttccttcttcaaagcttcgtaaggtataatctcttccattgaatct 41340341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 29917069 - 29917001
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaa 234  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||| | ||||||||    
T  29917069 tgtctatgcactttccttcttcaaagctccctcaggtacaatctcttctattgaatctttattgattaa 29917001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 39930887 - 39930938
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccata 217  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  39930887 tgtctatgctctttccttcttcaaagctccatcatgtataatctcttccata 39930938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 46626709 - 46626614
Alignment:
Q  128 cgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| ||||  |||| || ||| ||||| || ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| | ||||||    
T  46626709 cgtttggttctgttaaaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcagatataatctcttcccttgaatct 46626614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 4078128 - 4078079
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4078128 cctgtctatgcgctttccttcttcagagctccatcaggtataatctcttc 4078079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 4164940 - 4164819
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||||| ||||||||| |||||||| || ||||| |||||| || |  | |||||||| || ||||| || |||| ||||||  ||||||||||||||||    
T  4164940 tatcttacggtggtcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttc 4164841  T
Q  214 catagaatctcttttgattaaa 235  Q
    ||| |||||| |||| ||||||    
T  4164840 cattgaatctattttaattaaa 4164819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 34207231 - 34207110
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||||| ||||||||| |||||||| || ||||| |||||| || |  | |||||||| || ||||| || |||| ||||||  ||||||||||||||||    
T  34207231 tatcttacggtggtcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttc 34207132  T
Q  214 catagaatctcttttgattaaa 235  Q
    ||| |||||| |||| ||||||    
T  34207131 cattgaatctattttaattaaa 34207110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 22818952 - 22819047
Alignment:
Q  110 ttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtata 205  Q
    ||||||||||| ||||||||| |  |||| || ||| | |||||| |  || | ||||||||||||||||||||||||| ||||||||||||||||    
T  22818952 ttcctatcttttggtggtcgtctagttcttcttaaggctgtcctgtcctctcttcctgtctatgcactttccttcttcagagctccatcaggtata 22819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 18672021 - 18671963
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  18672021 ctgtctatgatctttccttcttcaaagctatatcaggtataatctcttccattgaatct 18671963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 31423434 - 31423386
Alignment:
Q  175 actttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31423434 actttcctttttcaaagctccgtcaggtataatctcttccattgaatct 31423386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 43572488 - 43572360
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||||||||||||||||||||| || ||| | || ||||| || || || |||||||| ||||| || || ||  ||||  ||||| || | ||||    
T  43572488 gtgaatcgtattaaatctagattgtcggggtggaatagccggtttctctcgtttggtggtcgcttgatcctcctgaaagccgttttgacttctctgcctg 43572389  T
Q  168 tctatgcactttccttcttcaaagctcca 196  Q
    | ||||| ||||||||||| |||||||||    
T  43572388 tttatgctctttccttctttaaagctcca 43572360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 45164935 - 45165014
Alignment:
Q  251 agtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttag 330  Q
    ||||||||||||||||||||||||||||||| ||||  ||   | ||| |  |||||||||||||||||||||| |||||    
T  45164935 agtgaggatcatagaaaaatatcttgggtgggttggcagagagtttgtatgagaaaggagtatggtggtttaggagttag 45165014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 45871629 - 45871555
Alignment:
Q  149 gtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| || || ||||||| ||||| |||||||||||||||||||| |||||||| || ||||| || ||||||    
T  45871629 gtcctgtcttctctacctgtttatgctctttccttcttcaaagctccttcaggtattatttcttctattgaatct 45871555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 2820012 - 2820069
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||  ||||||||||||||||| || ||||||||||||||||| || ||||||    
T  2820012 tgtctatgttctttccttcttcaaagccccgtcaggtataatctcttctattgaatct 2820069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 41804961 - 41805098
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||| ||||||||||| |   | ||||||||  |||| || ||||| || ||  |||| |||||||| ||| ||||  || ||||||||||||| |    
T  41804961 attaaatcaagattgtctgggttcaatagtcggtttttatcgtttggtggccggttagttcttctaaagtctgtcttgacctctctacctgtctatgctc 41805060  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    | ||||||||||| ||| | ||||||||||| ||||||    
T  41805061 tctccttcttcaaggcttcgtcaggtataatttcttcc 41805098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 17056430 - 17056334
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    ||||||| ||||||||| || |||| || ||||| ||| || |  || | |||||||||||  |||||||||||| ||| |||||||||||||||||    
T  17056430 tatcttttggtggtcgtctggttctccttaagtctgtcttgtcctctcttcctgtctatgctttttccttcttcagagcaccatcaggtataatctc 17056334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 34791964 - 34792004
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  34791964 cctgtctatgccctttccttcttcaaagctccctcaggtat 34792004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 37942138 - 37942214
Alignment:
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    |||||||||||||||   |||||||||||||||| || || ||||| |||||||  || ||||||||||| ||||||    
T  37942138 ctttacctgtctatgtcatttccttcttcaaagccccgtcgggtattatctcttatattgaatctcttttaattaaa 37942214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 25018562 - 25018641
Alignment:
Q  135 ttctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||| |||||||| ||| ||||  |||||||| ||||||  |||||||||||||| ||| | ||||||||||| ||||||    
T  25018562 ttcttctaaagtctgtcttgacctctttacctatctatgttctttccttcttcaaggcttcgtcaggtataatttcttcc 25018641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 28173273 - 28173331
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||| ||||  |||||||||||||| |||| ||| ||||||||||| ||||||    
T  28173273 ctgtctatgctctttttttcttcaaagctccgtcagatattatctcttccattgaatct 28173331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 28740224 - 28740268
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatc 208  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  28740224 cctgtttatgctctttccttcttcaaagctcccttaggtataatc 28740268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 23641775 - 23641939
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  23641775 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 23641874  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  23641875 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 23641939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 23647433 - 23647597
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  23647433 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcatttgattcttctaaagtctgtcctgactg 23647532  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  23647533 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 23647597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 47419760 - 47419596
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47419760 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtcggtcctgactg 47419661  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | |||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  47419660 ctctccctgtctatgcactctccttcttcaaagctccgacaggtataatctcttccattgaatct 47419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 19756223 - 19756059
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19756223 gaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcctgactg 19756124  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |  |||||||||||||||||||||| |||||| |||  |||||||||||||||||||| ||||||    
T  19756123 cgctacctgtctatgcactttcctttttcaaaactctgtcaggtataatctcttccattgaatct 19756059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 19783583 - 19783747
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19783583 gaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcctgactg 19783682  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |  |||||||||||||||||||||| |||||| |||  |||||||||||||||||||| ||||||    
T  19783683 cgctacctgtctatgcactttcctttttcaaaactctgtcaggtataatctcttccattgaatct 19783747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 1827724 - 1827888
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  1827724 gaacctattgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctctctttcggtggccgtttgattcttctaaagtccgtcctgactg 1827823  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  1827824 ctcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 1827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 48313047 - 48312886
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || ||| |||||||| ||||||||||||||||||| ||||||||||| ||||| ||| ||||| | ||||| || || | |||| |||||||      
T  48313047 cctgttgttaattgtattaaaactagattgtctggttggcatagtcggttcctttcttttggtcgtcgtctaattcttctcaaattcgtcatgactgcac 48312948  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  48312947 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 48312886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 55299577 - 55299426
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||||||||||||||||||||| |||||| | |||||||| || ||||| |||||||| ||| ||||||| || || ||| ||||      
T  55299577 gaacctattgtgaatcgtattaaatctagattgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacct 55299478  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    || | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  55299477 ctctgcctgtctatgcactttccttcttcaaagctccaacaggtataatctc 55299426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 40689037 - 40688867
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    ||||||||||| || ||||| ||||||||| ||||| |||||||||||||||| || ||||| || ||||| ||||||||  ||||||| ||| ||||||    
T  40689037 gaacctgtggttaaccgtataaaatctagactgtctagttggcaaagtcggtttctttcttttggaggtcgcttgattcttttaaagtctgtcttgactg 40688938  T
Q  159 ctttacctgtctatgcactttccttcttcaaa-gctccatcaggtataatctcttccatagaatctctttt 228  Q
    |  || |||||||||| ||||||||||||||| |||||| |||||| ||||||||||||| ||||| ||||    
T  40688937 cgctatctgtctatgctctttccttcttcaaaggctccagcaggtacaatctcttccataaaatctatttt 40688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 19733184 - 19733336
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    ||||| |||||| ||||||||| ||||| ||| ||||||||||| ||||| |||||||| ||||| || || || || |||||||||||  | |||||||    
T  19733184 aatcgaattaaagctagattgtttggttagcatagtcggttcctttcttttggtggtcgattgatccttctcaaatctgtcctgactgcccttcctgtct 19733283  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  19733284 atgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatct 19733336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 23872661 - 23872812
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | |||||||| || ||||| |||||||| ||| ||||||| || || ||| ||||      
T  23872661 gaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacct 23872760  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    || | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23872761 ctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatctc 23872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 29552994 - 29553149
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    ||||||||||||| | ||||| |||| |||||| | ||| | ||||| ||||| |||||||||||| |||| || ||  | ||| ||||| || | ||||    
T  29552994 gtgaatcgtattagaactagactgtcgggttggaatagttgtttcctttcttttggtggtcgtttggttcttctcaaagctgtcttgacttctctgcctg 29553093  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  29553094 tctatgctctttccttcttcaaagctccgtcaggtataatctcttccattgaatct 29553149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 20675991 - 20675827
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||  | ||||||||  | ||||| |||||||| ||| ||||||| || || ||| ||||      
T  20675991 gaacctattgtgaatcgtattaaatctagactgtcgggttgtaatagtcggtttttctcttttggtggtcgcttggttctactcaaatctgtcttgacct 20675892  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | ||||||||||||||||| ||||||||||||||| ||||||||||||| || || ||||||    
T  20675891 ctctgcctgtctatgcactttcattcttcaaagctccagcaggtataatctcctctattgaatct 20675827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 55724903 - 55725055
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| || || ||||||||  ||||||| || || |||||||| | ||   | |||||||    
T  55724903 aatcgtattaaatctagattgtctatttggcatagtcggttcctctcctttggtggtcgcctgattcttctcaaatccgtcctaaatgtgcttcctgtct 55725002  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||  |||||||| ||||||||||| || ||||||||||||||||| ||||||    
T  55725003 atgttctttcctttttcaaagctccgtcgggtataatctcttccattgaatct 55725055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 228
Target Start/End: Original strand, 19162368 - 19162522
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||||| ||||||| ||||| ||||||||||| |||| || || || || ||||| ||||||||  ||||||  ||| |||| ||  ||||||||||||    
T  19162368 cgtattagatctagactgtctagttggcaaagtaggtttctttcctttggaggtcgcttgattcttttaaagtatgtcttgaccgcgctacctgtctatg 19162467  T
Q  174 cactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    | |||||||||||||| |||||| |||||| ||||||||||||||| ||| ||||    
T  19162468 ctctttccttcttcaaggctccagcaggtacaatctcttccatagattctatttt 19162522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 34976897 - 34976733
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||| ||| || ||| |||| |||||||||||| | ||||  ||  ||||||| || || |||||| ||||  ||||||| ||||||||      
T  34976897 gaacctattgtgagtcgcataaaagctaggttgtctggttggaatagtcattttttatcttttggcggccgtttggttcttttaaagtctgtcctgacct 34976798  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34976797 ctctgcctgtttatgcgctttccttcttcaaagctccatcaggtataatctcttccattgaatct 34976733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 43516013 - 43516101
Alignment:
Q  140 ctaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||  ||| |||||| ||||    
T  43516013 ctaaagtctgtcctgactgcattacctgtctatgctctttccttcttcaaggctccatcaggtataatctctgtcattgaatctatttt 43516101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 19115383 - 19115228
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    ||||||||| ||||| || || |||| |||||| | ||||| ||||| ||||| ||||| || ||| |||| || ||  | ||| ||||| || |  |||    
T  19115383 gtgaatcgtgttaaagctcgactgtcgggttggaatagtcgtttcctctcttttggtggccgcttggttcttctcaaagctgtcttgacttctctgtctg 19115284  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  19115283 tctatgcactttccttcttcaaagctccgtcaggtataatctctaccattgaatct 19115228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 26694875 - 26694720
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| |||||||||||| || | |||||| | ||| | || || ||||| ||||| || |||||||| || || || || |||||  || | ||||    
T  26694875 gtgaatcgcattaaatctagactgacgggttggaatagtagatttctctcttttggtggccgcttgattctcctcaaatcagttctgacatctctgcctg 26694776  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  26694775 tctatgccctttctttcttcaaagctccaacaggtataatctcttccattgaatct 26694720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 42952808 - 42952879
Alignment:
Q  152 ctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  42952808 ctgacttctttgcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 42952879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 2365945 - 2365793
Alignment:
Q  75 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgc 174  Q
    |||||||||||||||||||||||||| | ||||| || || ||||| |||||||| ||| || | || ||||| ||| ||||| | |||||||||||||     
T  2365945 gtattaaatctagattgtctggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctgtcttgacttccttacctgtctatgt 2365846  T
Q  175 actttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
     || ||||| |||||| |||  ||||||||||||||||| || || ||||||||    
T  2365845 tctctcctttttcaaa-ctctgtcaggtataatctcttctattgagtctctttt 2365793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 19648648 - 19648503
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||||| ||||||||| |||| |||||| | ||||| ||||| ||||| | ||| |||||| |||| || || || ||  ||||  ||     
T  19648648 cctgttgtgaatcgtataaaatctagagtgtcaggttggaatagtcgtttcctctcttttgctggccgtttggttcttctcaaatctgtgttgacctctc 19648549  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataat 207  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||    
T  19648548 tacctgtctatgctctttctttcttcaaagctccgtcaggtataat 19648503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 221
Target Start/End: Complemental strand, 8936027 - 8935868
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||||| ||| ||||| |||| |||||| | ||||| ||||| ||||| ||| | |||||| |||| || || || ||  ||||  ||     
T  8936027 cctgttgtgaatcgtataaaaactagactgtcaggttggaatagtcgtttcctctcttttggttgccgtttggttcttctcaaatctgtgttgacctctc 8935928  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    |  |||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||    
T  8935927 tgtctgtctatgctctttccttcttcaaagctccgtcaggtataatctctgccattgaat 8935868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 20396432 - 20396381
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20396432 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccat 20396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 42779100 - 42779049
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42779100 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccat 42779049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 54482449 - 54482508
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  54482449 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 54482508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 10562614 - 10562663
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10562614 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttcc 10562663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 7662561 - 7662656
Alignment:
Q  128 cgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| ||||  |||| || ||| ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||||    
T  7662561 cgtttggttctgttaaaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatct 7662656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 40688829 - 40688743
Alignment:
Q  252 gtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttga 338  Q
    |||||||||||||||||||||||||||||| ||||  ||  || ||| |  |||||||||||||||||||||| ||||| |||||||    
T  40688829 gtgaggatcatagaaaaatatcttgggtgggttggcagagaatttgtatgagaaaggagtatggtggtttaggagttaggcagttga 40688743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 7099303 - 7099260
Alignment:
Q  192 ctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  7099303 ctccatcaagtataatctcttccatagaatctcttttgattaaa 7099260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 15741063 - 15741012
Alignment:
Q  172 tgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  15741063 tgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 15741012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 53486143 - 53486270
Alignment:
Q  89 ttgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttca 188  Q
    |||||||||||| | ||||| || |||||||| || || ||| || || |  ||||||| || |||||  || | ||||||||||   ||||||||||||    
T  53486143 ttgtctggttggaatagtcgttttctatcttttggcggccgtctggttttgttaaagtctgttctgacctctcttcctgtctatgtgttttccttcttca 53486242  T
Q  189 aagctccatcaggtataatctcttccat 216  Q
    ||||||||||| ||||||||||||||||    
T  53486243 aagctccatcaagtataatctcttccat 53486270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 29327989 - 29328119
Alignment:
Q  83 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcct 182  Q
    |||||| |||| |||| | ||||||||||||| || || ||| |||| || ||||| |||||||  ||| ||||  || ||||||||||||  |||||||    
T  29327989 tctagactgtcaggtttgaaaagtcggttcctgtcgtttggtagtcgcttaattcttctaaagtttgtcttgacctctctacctgtctatggtctttcct 29328088  T
Q  183 tcttcaaagctccatcaggtataatctcttc 213  Q
    ||||||| |||||| || ||||||| |||||    
T  29328089 tcttcaaggctccaacaagtataatttcttc 29328119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 38296558 - 38296492
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| | |||||| |||||| ||||    
T  38296558 tacctgtctatgctctttccttcttcaaggctccgtcaggtataattttttccattgaatctatttt 38296492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 55464091 - 55464208
Alignment:
Q  85 tagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttc 184  Q
    |||||||||||| ||| | ||||| ||  | ||||| |||||||||||||| || || ||||| ||  ||||| || | | ||||||||| |||||||||    
T  55464091 tagattgtctgggtgggagagtcgctttttttcttttggtggtcgtttgatccttcttaagtctgtattgacttctctgcatgtctatgctctttccttc 55464190  T
Q  185 ttcaaagctccatcaggt 202  Q
    |||||||||| |||||||    
T  55464191 ttcaaagctcaatcaggt 55464208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 11586367 - 11586531
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || ||||| |||||||||||| ||||| | ||| | ||||||||||| ||||| ||||||||  | || || ||||| |  |||||||||     
T  11586367 gaacctgttgttaatcgaattaaatctagactgtctagatggaagagtcggttcctttcttttggtggtcgcctaatccttctaaaatttgtcctgacta 11586466  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |  | ||||| || || |||||||| | ||||||||  | ||||||||| |||||||| ||||||    
T  11586467 cacttcctgtgtacgctctttccttttacaaagctctgtaaggtataatttcttccattgaatct 11586531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 9691361 - 9691227
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||||| || || ||||||||||| || ||||| || |  ||||| ||  |||| || ||||| ||||| ||| |  | ||||| ||||| |    
T  9691361 attaaatctagattatcggggtggcaaagtcgttttctatcctttgagggtcggttagttcttctcaagtctgtccttacttcgcttcctgtttatgctc 9691262  T
Q  177 tttccttcttcaaagctccatcaggtataatctct 211  Q
    ||||||||||||||| ||  |||||||||||||||    
T  9691261 tttccttcttcaaagttctgtcaggtataatctct 9691227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 19308834 - 19308940
Alignment:
Q  122 ggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    |||||||| |||||||| || ||||| |||||| || |  | |||||||| || ||||| || |||| ||||||  ||||||||||||||||||| ||||    
T  19308834 ggtggtcgcttgattcttcttaagtctgtcctgtcttcactgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaat 19308933  T
Q  222 ctctttt 228  Q
    || ||||    
T  19308934 ctatttt 19308940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 2072389 - 2072343
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctctt 212  Q
    ||||||||| ||||| |||||||||||||| |||| |||||||||||    
T  2072389 tgtctatgctctttctttcttcaaagctccgtcagatataatctctt 2072343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 54685362 - 54685316
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaag 105  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||    
T  54685362 gaacctgtggttaatcgtataaaatctagactgtctggatggcaaag 54685316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 19838028 - 19837915
Alignment:
Q  122 ggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    ||||| || |||||||| || ||||| |||||| || |  | |||||||| || ||||| || |||| ||||||  |||||||||||||| |||| ||||    
T  19838028 ggtggccgcttgattctccttaagtctgtcctgtcttcactgcctgtctacgccctttcttttttcagagctcccgcaggtataatctctaccattgaat 19837929  T
Q  222 ctcttttgattaaa 235  Q
    || |||| ||||||    
T  19837928 ctattttaattaaa 19837915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 3129265 - 3129305
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  3129265 cctgtctatgccctttctttcttcaaaactccatcaggtat 3129305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 2365234 - 2365070
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  2365234 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 2365135  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  2365134 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 2365070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 34331999 - 34332163
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  34331999 gaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtctgtcctgactg 34332098  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||    
T  34332099 ctctacctgtctatgcactttccttttttaaagctccgtcaggtataatctcttccattgaatct 34332163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 19919413 - 19919577
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  19919413 gaacctgtggtagatcgtattaaatctagattgtctggttggcaaagtcggtttctatctttcggtggtcgtttgattctactaaagttcgtcctaactg 19919512  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  19919513 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 19919577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 48569210 - 48569371
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || |||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| || || ||||||||||||||      
T  48569210 cctgttgttaatcgtataaaatctagattgtctggttggcatagtcggttcctttcttttggtggtcgtttgattcttctcaaatccgtcctgactgcac 48569309  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  48569310 ttcctgtctatgcactttcctttttcaaagctccatcaggtataatctcttccattgaatct 48569371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 962365 - 962511
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| ||||| || ||||| || || || || |||||||||||  | ||||||||||| |    
T  962365 attaaagctagattgtctggttggcatagtcggttcctttcttttggtggccggttgatccttctcaaatctgtcctgactgcacttcctgtctatgctc 962464  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  962465 tttcctttttcaaagctccgtcaggtataatctcttccattgaatct 962511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 11757689 - 11757856
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| |||| || ||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |   | || ||||| ||| |||| |    
T  11757689 gaacctatggttaaccgtataaaatctagattgtttggttggcaaagccggttcctatccttcggtggtcgtttaa--attcttaagtctgtcttgaccg 11757786  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    || | | ||||||||| ||||| ||||| || |||||||| ||||||||||||||| |||||||||||||    
T  11757787 ctcttcttgtctatgctctttctttcttaaaggctccatctggtataatctcttccctagaatctctttt 11757856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 17077484 - 17077645
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || ||||| |||||| ||||||||||||||||||| ||||||||||| |||||  ||||||||||||| || || || |  ||||| | |||      
T  17077484 cctgttgttaatcgaattaaaactagattgtctggttggcatagtcggttcctttcttttagtggtcgtttgatccttctcaaatttgtcctaattgcac 17077583  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | | |||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  17077584 ttcatgtctatgcactttcctttttcaaagctctgtcaggtataatctcttccattgaatct 17077645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 6175661 - 6175825
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||| ||||||||||||| |||| |||||| | |||||||| || ||||| |||||||| ||| ||||||| || || ||| ||||      
T  6175661 gaacctattgtgaatcatattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacat 6175760  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | ||||||||||||||||||||||||||| ||||| ||||||||||||| || || ||||||    
T  6175761 ctctgcctgtctatgcactttccttcttcaaaactccaacaggtataatctcctctattgaatct 6175825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 19891621 - 19891469
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| || ||  ||||||   |||||||||| || || ||| |||||||  | ||||| |    
T  19891621 aatcgtattaaatctagattgtctggttagcatagtcggttcctttcctttagtggtcacctgattctactcaaatctgtcttgactgcgcttcctgttt 19891522  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||| ||||||||| ||||||||||| ||||||||||| |||||||| ||||||    
T  19891521 atgaactttcctttttcaaagctccgtcaggtataatatcttccattgaatct 19891469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 23819512 - 23819357
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| ||||||  ||| |||||||||||| | ||||| ||| ||||||| ||||||||  || ||||  ||||||| ||||||||  || | ||||    
T  23819512 gtgaatcggattaaagttaggttgtctggttggaatagtcgtttcttatcttttggtggtcgcatggttctcttaaagtctgtcctgacctctctgcctg 23819413  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  23819412 tatatgcgctttccttcttcaaagctccatcaagtataatctcttccattgaatct 23819357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 40512926 - 40513077
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||| |||  || ||||||||||| || || ||||| || ||||| ||| | || || ||||| ||||||||||| |||||||||||||| |    
T  40512926 attaaatctagactgttggggtggcaaagtcgttttctctcttttggaggtcggttggtccttcttaagtctgtcctgactgcattacctgtctatgctc 40513025  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||| ||||| |||||||||||||||  ||| |||||||||||    
T  40513026 tttccttcttcaaggctccgtcaggtataatctctatcattgaatctctttt 40513077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 16179893 - 16179732
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || ||||| |||||||||||||||||| ||||||| |||| |||||| || || |||||| | ||||  || || || || ||||||| |||      
T  16179893 cctgttgttaatcgaattaaatctagattgtctagttggcatagtcagttcctttcctttggtggtaggttgacccttctcaaatctgtcctgattgcac 16179794  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | |||||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||    
T  16179793 ttcctgtctatgcactttcctttttcaaagctctgtcaggtataatctcttccattgaatct 16179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 19876199 - 19876051
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    ||||||||||||  |  ||||||| |||||||||| || ||||||||| | || ||||||||||| ||||| ||| |||| || ||||| |||||||||     
T  19876199 gaacctgtggtgtctactattaaaactagattgtcggggtggcaaagttgttttctatctttcgggggtcgcttggttcttcttaagtctgtcctgactt 19876100  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataat 207  Q
    |  | ||||||||||||||||||||||||||| |||| |||||||||||    
T  19876099 cgcttcctgtctatgcactttccttcttcaaatctccgtcaggtataat 19876051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 24925878 - 24926033
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    ||||||||||| ||||||||| |||| |||||| | |  ||||| || ||||| || ||||| ||||| || || || || ||  ||||| || | ||||    
T  24925878 gtgaatcgtataaaatctagactgtcgggttggaataaacggtttctctcttttggcggtcgcttgatcctccttaaatcggttttgacttctctgcctg 24925977  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  24925978 tctatgcactttctttcttcaaagctccatcaggtataatctcttccattgaatct 24926033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 31675869 - 31675718
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||| |||||||| || || ||||||| ||| || || ||||| || ||||| ||| ||||||| ||||| ||||||||  | || ||||||||||| |    
T  31675869 attaagtctagattatcggggtggcaaaatcgctttctctcttttgggggtcggttggttctactcaagtctgtcctgacctcattgcctgtctatgccc 31675770  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||| ||||    
T  31675769 tttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 31675718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 8130906 - 8130760
Alignment:
Q  82 atctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcc 181  Q
    ||||||| |||||  |||||||||||| || || || || || ||||| |||||||| |||||||| ||| |||| ||   ||| |||||||| ||||||    
T  8130906 atctagactgtctaattggcaaagtcgatttctttcatttggaggtcgcttgattcttctaaagtctgtcttgaccgcgcaaccggtctatgctctttcc 8130807  T
Q  182 ttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||| |||||| |||||| ||||||||||||||||||| ||||    
T  8130806 ttcttcaaggctccagcaggtagaatctcttccatagaatctatttt 8130760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 36709856 - 36709701
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| |||||||||||| |||| |||||| | ||| | || || ||||||||||| |||||||| || || || || || || ||  || | ||||    
T  36709856 gtgaatcgcattaaatctagactgtcgggttggaatagtagatttctttctttcggtggccgtttgatcctcctcaaatcagttctaacatctctgcctg 36709757  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  36709756 tcgatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatct 36709701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 43120867 - 43121022
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||  ||||||| |||| ||||||||||| | ||||| ||| ||||||| || |||||  || ||||  |||| || ||||||||  || |  |||    
T  43120867 gtgaatcagattaaatttagactgtctggttggaatagtcgtttcttatcttttggcggtcgcctggttcttttaaaatctgtcctgacctctctgtctg 43120966  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  43120967 tctatgcgttttccttcttcaaagctccattaggtataatctcttccattgaatct 43121022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 14863658 - 14863804
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||| ||||||||||| | || |||||  |||| ||||||||||| ||  | ||  | ||  | || |||||| |||| ||||||||||| |    
T  14863658 attaaatctagactgtctggttggaatagccggtttttatcgttcggtggtcgcttagtcctcttgaaagcagttctgacttctttgcctgtctatgctc 14863757  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||    
T  14863758 tttccttctttaaagctccattaggtataatctcttccattgaatct 14863804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 21739690 - 21739836
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||| |||| |||||| | || ||||| ||||| ||||||||||| ||| | ||  | ||  | || | |||| |||| ||||||||||| |    
T  21739690 attaaatctagactgtcaggttggaatagccggtttctatcgttcggtggtcgcttggtccttttgaaagcagttccgacttctttgcctgtctatgctc 21739789  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  21739790 tttccttctttaaagctccatcagttataatctcttccattgaatct 21739836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 46907864 - 46908018
Alignment:
Q  69 tgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgt 168  Q
    |||||||||||||| ||||| ||||||||||| | ||||| || |  || ||  | || |||||| ||||  ||||||| || |||||  || | ||| |    
T  46907864 tgaatcgtattaaagctagactgtctggttggaatagtcgatttcattccttttgcggccgtttggttcttttaaagtctgttctgacctctctgcctat 46907963  T
Q  169 ctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  46907964 ctatgctctttccttcttcaaagctccatcaagtataatctcttccattgaatct 46908018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 83 - 223
Target Start/End: Original strand, 12341463 - 12341603
Alignment:
Q  83 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcct 182  Q
    |||||||||||||||||||| ||| ||| ||| || || |||||||| ||||| || || || || ||| |||||||  | ||||||||| |||||||||    
T  12341463 tctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtctatacactttcct 12341562  T
Q  183 tcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | || |||||||| || |||||||||||||| || ||||||    
T  12341563 tttttaaagctccgtcgggtataatctcttctattgaatct 12341603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 34830331 - 34830179
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctt-tcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    ||||||||||||||||| || ||||||||||| || || |||| | || ||||| ||| | || || ||||| |||||||| |  ||||||||||||||     
T  34830331 attaaatctagattgtcggggtggcaaagtcgttttctctcttatggggggtcggttggtccttcttaagtctgtcctgaccgtgttacctgtctatgct 34830232  T
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||   ||||| ||||||||||||||| |||| |||||| ||||    
T  34830231 ctttccttcttcctggctccgtcaggtataatctctgccattgaatctatttt 34830179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 52907298 - 52907390
Alignment:
Q  131 ttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||  ||||||| ||| || || || ||||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  52907298 ttgattctcataaagtctgtcatgtcttctctacctgtttatgccctttccttcttcaaagctccatcaggtataatctcttctattgaatct 52907390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 31920554 - 31920705
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||| |||||||| || || ||||||| ||| || || ||||| || ||||| ||| ||||||| ||||| ||||||||  | || ||||||||||| |    
T  31920554 attaagtctagattatcggggtggcaaaatcgctttctctcttttgggggtcggttggttctactcaagtctgtcctgacctcattgcctgtctatgccc 31920653  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||||||| | ||| |||||||||||  ||| |||||| ||||    
T  31920654 tttccttcttcaaagcttcgtcaagtataatctctgtcattgaatctatttt 31920705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 50545174 - 50545035
Alignment:
Q  84 ctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcctt 183  Q
    |||| |||||| ||||| | ||||| ||  ||||||| || || ||| || ||||  ||||||| ||||||||  || |||| ||||||||  |||||||    
T  50545174 ctaggttgtctagttggaatagtcgttttttatcttttggcggccgtctggttcttttaaagtctgtcctgacctctctacccgtctatgcgttttcctt 50545075  T
Q  184 cttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  50545074 cttcaaaggtccatcaggtataatctcttccattgaatct 50545035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 18381901 - 18381831
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgatt 232  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  18381901 tacctgtctatgctatttcctttttcaaagctccatcaggtataatatcttccattgaatctattttgatt 18381831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 22733671 - 22733801
Alignment:
Q  75 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgc 174  Q
    |||||||| |||||||||||| |||||||||  |||| |  ||  |||||||||| ||| |||| || ||||||||||| |||||  | |||||||||||    
T  22733671 gtattaaaactagattgtctgtttggcaaagctggtttccctccatcggtggtcgcttggttcttctgaagtccgtcctaactgcacttcctgtctatgc 22733770  T
Q  175 actttccttcttcaaagctccatcaggtata 205  Q
     || ||||||||||| ||||||||| |||||    
T  22733771 tctgtccttcttcaaggctccatcatgtata 22733801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 15481049 - 15481106
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  15481049 tgtctatgctctttctttcttcaaagctccatcaggtataatctcttccattgaatct 15481106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 30166576 - 30166671
Alignment:
Q  128 cgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| ||||  |||| || ||| ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||||    
T  30166576 cgtttggttctgttaaaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatct 30166671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 42674631 - 42674786
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| |||||||||||| || |  ||||| | ||| | || || ||||| ||||| || |||||||| || || || || |||||  || | ||||    
T  42674631 gtgaatcgcattaaatctagactgacgagttggaatagtagatttctctcttttggtggccgcttgattctcctcaaatcagttctgacatctctgcctg 42674730  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||| ||||||||||||||| ||||| ||||||||||||| ||||||    
T  42674731 tctatgctctttctttcttcaaagctccaacaggtgtaatctcttccattgaatct 42674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 36731759 - 36731685
Alignment:
Q  149 gtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||  | ||| ||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  36731759 gtcctgactgcacttcctatctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatct 36731685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 55367547 - 55367401
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||||||||||||||| || ||||| ||||| || || || ||||| || || ||| || |  | ||||| |||||| |  |||| | |||||| || |    
T  55367547 attaaatctagattgtccgggtggcagagtcgttttctctcattcggaggccgattggttttgatcaagtctgtcctgtcctctttgcttgtctacgctc 55367448  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||    
T  55367447 tttcctttttcaaagctgcgtcaggtataatctcttccatagaatct 55367401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 25785951 - 25785830
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| |||||||||||||||||||  |||||||| || || || ||||||||||| ||||| || ||  |||   ||||||||||| | ||||||||||    
T  25785951 cgtataaaatctagattgtctggttaacaaagtcgatttctctccttcggtggtcgcttgatccttctctagtatctcctgactgctctgcctgtctatg 25785852  T
Q  174 cactttccttcttcaaagctcc 195  Q
    | |||||||||| ||| |||||    
T  25785851 ctctttccttctccaaggctcc 25785830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 47538133 - 47538069
Alignment:
Q  149 gtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    ||||||||  || ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  47538133 gtcctgacctctctacctgtctatgcgctttccttcttcaaaactccatcagatataatctcttc 47538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 10868500 - 10868437
Alignment:
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatc 222  Q
    |||| ||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  10868500 ctttgcctgtatatgctctttccttctttaaagctctatcaggtataatctcttccattgaatc 10868437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 53942095 - 53942033
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||  ||| |||||| ||||    
T  53942095 tgtctatgctctttccttcttcaaagctccgtcaggtataatctctatcattgaatctatttt 53942033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 52250412 - 52250464
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  52250412 tacctgtctatgcgctttccttcttcaaggctccgtcaggtataatttcttcc 52250464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 6825752 - 6825613
Alignment:
Q  75 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgc 174  Q
    |||||||||| |||||||||||||   | |||| |||  |||| || ||||| || ||  ||||  ||||||||||| ||||   | |||||||||||||    
T  6825752 gtattaaatcgagattgtctggtttcaatagtcagtttttatcgtttggtggccggttagttctcttaaagtccgtcttgacctttctacctgtctatgc 6825653  T
Q  175 actttccttcttcaaagctccatcaggtataatctcttcc 214  Q
     |||||||||||||| ||||| ||| ||||||| ||||||    
T  6825652 tctttccttcttcaaggctccgtcaagtataatttcttcc 6825613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 16672281 - 16672360
Alignment:
Q  135 ttctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||| |||||||| ||| ||||  || ||||||||||||  |||||||||||||| ||||| ||||||||||| ||||||    
T  16672281 ttctcctaaagtctgtcttgacctctctacctgtctatgttctttccttcttcaaggctccgtcaggtataatttcttcc 16672360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 17270944 - 17271095
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||| |||| |||||  |||||| ||||||| || || ||||| || |||||||||||| | || ||||| ||||||||  || | | |||||| || |    
T  17270944 attaattctaaattgttcggttggaaaagtcgttttctctcttttgggggtcgtttgatttttctgaagtctgtcctgacctctcttcatgtctacgctc 17271043  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||| ||| ||||||| ||  ||||||||||||| |||||| |||||| ||||    
T  17271044 ttttctttttcaaagttctgtcaggtataatctgttccattgaatctatttt 17271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 22734014 - 22734071
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||| || | ||||||||| ||||||||| |||||||||||||||| ||||||    
T  22734014 tgtctatgctctgttcttcttcaaggctccatcatgtataatctcttccattgaatct 22734071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 44888805 - 44888709
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    ||||||| ||||||||| || |||| || ||||| ||| || |  || | |||||||||||  |||||||||||| ||| |||||||||||||||||    
T  44888805 tatcttttggtggtcgtctggttctccttaagtctgtcttgtcctctcttcctgtctatgctttttccttcttcagagcaccatcaggtataatctc 44888709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 1709645 - 1709683
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  1709645 tgtctatgctctttccttcttcaaagctccataaggtat 1709683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 25388163 - 25388213
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||||||| ||||| |||||||||||||  | ||||||||||||||||||    
T  25388163 tgtctatgctctttctttcttcaaagctcttttaggtataatctcttccat 25388213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 31675650 - 31675608
Alignment:
Q  296 tgtttacgaaaggagtatggtggtttaggggttagacagttga 338  Q
    |||||||||||||||||||| || |||||||| ||||||||||    
T  31675650 tgtttacgaaaggagtatggagggttaggggtgagacagttga 31675608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 48930577 - 48930527
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||| ||| |||||||||| ||||| ||||||||||| ||||||    
T  48930577 cctgtctatgctcttaccttcttcaaggctccgtcaggtataatttcttcc 48930527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 7164333 - 7164289
Alignment:
Q  170 tatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||| |||||||||||||  ||||||||||||||||| ||||||    
T  7164333 tatgctctttccttcttcagggctccatcaggtataatttcttcc 7164289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 8948260 - 8948348
Alignment:
Q  116 tctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||| ||| |  |||| || ||||  ||||||||  || | |||||||||||  ||||||||||||||||||| ||||||||    
T  8948260 tctttcggtggccgtcttgttcttcttaagtttgtcctgacctctctccctgtctatgctatttccttcttcaaagctccctcaggtat 8948348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 11584927 - 11584859
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaa 234  Q
    |||||| || ||||| || |||||||||||  ||||||||||||| ||||| |||||| |||| |||||    
T  11584927 tgtctacgctctttcttttttcaaagctcccgcaggtataatctcctccattgaatctattttaattaa 11584859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 20797958 - 20797918
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    |||||||||||  ||||||||||||||||||| ||||||||    
T  20797958 cctgtctatgctttttccttcttcaaagctccctcaggtat 20797918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 53504529 - 53504581
Alignment:
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||| |||||||||||  |||||||||| ||||| || |||||||||||    
T  53504529 ctttcctttttcaaagctcctacaggtataatttcttctattgaatctctttt 53504581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 6051559 - 6051395
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  6051559 gaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 6051460  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  6051459 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 6051395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 76 - 195
Target Start/End: Complemental strand, 51052820 - 51052701
Alignment:
Q  76 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51052820 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacctgtctatgca 51052721  T
Q  176 ctttccttcttcaaagctcc 195  Q
    ||||||||||||||||||||    
T  51052720 ctttccttcttcaaagctcc 51052701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 35541990 - 35541826
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||| |||||||||| ||||||| ||||||||||||||||||| || || || ||||| ||||||||||| |||||||||||||||||||    
T  35541990 gaacctgttgtgaaccgtattaaatatagattggctggttggcaaagtcggtttctttccttaggtggccgtttgattcttctaaagtccgtcctgactg 35541891  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  35541890 ctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 35541826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 47622261 - 47622437
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || ||||| |||||||||||||||||||||||||  |||||||| || ||||| ||||||||  | || || |||||||| ||||||||||    
T  47622261 gaacctgttgttaatcgaattaaatctagattgtctggttggcgtagtcggtttctctcttttggtggtcgcctaatccttctaaagtctgtcctgactg 47622360  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    || | |||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||||| || ||||||    
T  47622361 ctcttcctgtctatgcactttcctttttcaaagctccgtcagatataatctcttccattgaatctctgttaattaaa 47622437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 5498042 - 5497891
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | |||||||| |||||||| |||||||| ||| |||| || || || ||||||||      
T  5498042 gaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacct 5497943  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5497942 ctttgcctgtctatgcaatttccttcttcaaagctccatcaggtataatctc 5497891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 32352496 - 32352647
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||| |||||||||||||| |||| |||||| | |||||||| || ||||| |||||||| ||| ||||||| || || ||| ||||      
T  32352496 gaacctattgtgaattgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacct 32352595  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    || | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32352596 ctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatctc 32352647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 48072610 - 48072761
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | |||||||| || ||||| |||||||| ||| ||||||| || || ||| ||||      
T  48072610 gaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacct 48072709  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    || | ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  48072710 ctctgcctgtctatgcgctttccttcttcaaagctccagcaggtataatctc 48072761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 20796613 - 20796452
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||| | ||||||||||||||||| |||||| | ||||| || || || ||||||||||| ||| | ||  | ||  | || |||||| |||    
T  20796613 cctgttgtgaatagaattaaatctagattgtcaggttggaatagtcgatttctctcgttcggtggtcgcttggtccttttgaaagcagttctgacttctt 20796514  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  20796513 ttcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 20796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 17709005 - 17708859
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    ||||||||||| ||| |||| |||||||||||| | ||||| || |||||||| || || ||| || ||    ||||||| || |||||  || | ||||    
T  17709005 gtgaatcgtataaaagctaggttgtctggttggaatagtcgttttctatcttttggcggccgtctggtttagttaaagtctgttctgacctctctgcctg 17708906  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17708905 tctatgcactttccttcttcaaagctccatcaggtataatctcttcc 17708859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 26721589 - 26721432
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||| |||||| |||| |||||||||||| | ||||| ||  ||||||  || || ||| || ||||  ||||||  ||||||||      
T  26721589 gaacctattgtgaatcgcattaaaactaggttgtctggttggaatagtcgttttttatcttatggcggccgtctggttcttttaaagtttgtcctgacct 26721490  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || | ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26721489 ctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccat 26721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 39431239 - 39431078
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||| | ||||||||||||||||| |||||| | |||||||| || || ||||||||||| ||| | ||  | ||  | ||||||| | | |    
T  39431239 cctgttgtgaatagaattaaatctagattgtcaggttggaatagtcggtttctctcgttcggtggtcgcttggtccttttgaaagcagtcctgaattcgt 39431140  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||    
T  39431139 tgcctgtctatgctctttccttatttaaagctccatcaggtataatctcttccattgaatct 39431078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 25504179 - 25504328
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||||| ||||||||| |||| |||||| | ||||| ||||| ||||| ||||| |||||| |||| || || || ||  ||||  ||     
T  25504179 cctgttgtgaatcgtataaaatctagactgtcaggttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctc 25504278  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctct 211  Q
    | ||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  25504279 ttcctgtctatgctctttctttcttcaaagctccgtcaggtataatctct 25504328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 28358830 - 28358678
Alignment:
Q  76 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    ||||||||||||||| || || ||||||||||| || ||||| ||||| ||||| |||||||| || ||||  ||||| ||  |  | | |||||||||     
T  28358830 tattaaatctagattatcggggtggcaaagtcgttttctatccttcgggggtcgcttgattcttcttaagtttgtcctaacatcgcttcatgtctatgct 28358731  T
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||||||||||||||| |||||||||||||||  ||| |||||| ||||    
T  28358730 ctttccttcttcaaagctccgtcaggtataatctctctcattgaatctatttt 28358678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 13867042 - 13867193
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||| |||  || || |||||||| || || ||||| || ||||| ||| | || || ||||| ||||||||||| |||||||| ||||| |    
T  13867042 attaaatctagactgttggggtgacaaagtcgttttctctcttttggaggtcggttggtccttcttaagtctgtcctgactgcattacctgtatatgctc 13867141  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||| ||||| |||||||||||||||  ||| |||||| ||||    
T  13867142 tttccttcttcaaggctccgtcaggtataatctctgtcattgaatctatttt 13867193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 49264158 - 49264313
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||| | ||||||||||||||||  |||||| | |||||||| || || ||||||||||| ||| | ||  | ||  | || |||||| | || ||||    
T  49264158 gtgaatagaattaaatctagattgttaggttggaatagtcggtttctctcgttcggtggtcgcttggtccttttgaaagcagttctgacttcgttgcctg 49264257  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  49264258 tctatgctctttctttctttaaagctccatcaggtataatctcttccattgaatct 49264313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 5809453 - 5809387
Alignment:
Q  143 aagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatct 209  Q
    ||||| |||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  5809453 aagtctgtcctgaccgcgttacctgtctatgctctttccttcttcaaagctccgtcaggtataatct 5809387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 3544309 - 3544454
Alignment:
Q  83 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcct 182  Q
    |||||||| || || ||||||||||| |  || ||||| || ||||| |||||||| || ||| | ||| ||||  | || ||||||||||| |||||||    
T  3544309 tctagattatcggggtggcaaagtcgctctctctcttttgggggtcggttgattcttctcaagactgtcttgacctcattgcctgtctatgccctttcct 3544408  T
Q  183 tcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||| |||||||||||||||  ||| |||||| ||||    
T  3544409 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 3544454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 7396010 - 7396068
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  7396010 ctgtctatgatctttccttcttcaaagctccatcaggtataatctcttccgttgaatct 7396068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 10710388 - 10710544
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||| || ||| |||| ||| |||||||| | ||||| ||  ||||||| || || ||| |  ||||  ||||||| || |||||      
T  10710388 gaacctattgtgaatcgcataaaagctaggttgactggttggaatagtcgttttttatcttttggcggccgtctagttctgttaaagtcggttctgacct 10710487  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||  |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  10710488 ctttgtctgtctatgcgctt-ccttcttcaaagctccatcaggtataatctcttccat 10710544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 19043007 - 19042926
Alignment:
Q  131 ttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctctt 212  Q
    ||||||||  ||||||| |||||| || || ||||||| ||||| ||||||||||||  |||||||||||||||||||||||    
T  19043007 ttgattctcataaagtctgtcctgtcttctctacctgtttatgccctttccttcttctgagctccatcaggtataatctctt 19042926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 19014274 - 19014336
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||| |||||||||||||||||||  |||| ||||||||||||||| |||||| ||||    
T  19014274 tgtctatgctctttccttcttcaaagctctgtcagatataatctcttccattgaatctatttt 19014336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 32642758 - 32642652
Alignment:
Q  128 cgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttt 227  Q
    ||||||||||| || || ||||||||| || | || |||||||| || || ||||| |||| ||||||  ||||||||||||||||||| |||||| |||    
T  32642758 cgtttgattctccttaaatccgtcctgtcttcattgcctgtctacgccctatcctttttcagagctcccgcaggtataatctcttccatcgaatctattt 32642659  T
Q  228 tgattaa 234  Q
    | |||||    
T  32642658 ttattaa 32642652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 3074593 - 3074548
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctct 211  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3074593 tgtctatgccctttccttcttcagagctccatcaggtataatctct 3074548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 22191021 - 22191117
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    ||||||| ||||||||| || |||| || ||||| ||| || || || | |||||||||||  |||||||||||| ||| |||||||||||||||||    
T  22191021 tatcttttggtggtcgtctggttctccttaagtctgtcttgtcttctcttcctgtctatgctttttccttcttcagagcaccatcaggtataatctc 22191117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 33259991 - 33260055
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||  || || |||||||||||    
T  33259991 cctgtctatgctctttccttcttcaaagctccctcaggtatcatcttctctattgaatctctttt 33260055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 33280150 - 33280214
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||  || || |||||||||||    
T  33280150 cctgtctatgctctttccttcttcaaagctccctcaggtatcatcttctctattgaatctctttt 33280214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 48435034 - 48434942
Alignment:
Q  131 ttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||  |||| || |||||| || | || |||||||| || |||||||| |||||||||||  ||||||||||||||||||| ||||||    
T  48435034 ttgattcttttaaaatctgtcctgtcttcattgcctgtctacgctctttcctttttcaaagctcccgcaggtataatctcttccattgaatct 48434942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 20988008 - 20987942
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||| |||||||||||||||||||| ||| |||| ||||||  ||| |||||| ||||    
T  20988008 tacctgtctatgctctttccttcttcaaagctccgtcatgtatcatctctatcattgaatctatttt 20987942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 45271092 - 45271042
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  45271092 cctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcc 45271042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 21409142 - 21409046
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    ||||||| ||||||||| || |||| || ||||| |||||| |  || | ||||||||||   |||||||||||| ||| |||||||||||||||||    
T  21409142 tatcttttggtggtcgtctggttctccttaagtctgtcctgtcctctcttcctgtctatgttttttccttcttcagagcaccatcaggtataatctc 21409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 1247788 - 1247939
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||| |||||| | || || ||||||||||| || || ||||| || |  || ||| |||| || ||||| ||||||||  | |||| ||||||||| |    
T  1247788 attaagtctagactatcggggtggcaaagtcgctttctctcttttggagcccggttggttcttctcaagtctgtcctgacctcgttacatgtctatgctc 1247887  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||| ||||||||| | || ||||||||||||  ||| |||||| ||||    
T  1247888 tttcctttttcaaagcttcgtcgggtataatctctgtcattgaatctatttt 1247939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 14975993 - 14976045
Alignment:
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||||||||| || ||  |||||||||||||||| ||||||||| ||||    
T  14975993 ctttccttcttcaaggcccccgcaggtataatctcttctatagaatctatttt 14976045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 30650308 - 30650348
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||| |||||||||||||||||||| | ||||||    
T  30650308 cctgtctatgcgctttccttcttcaaagctcccttaggtat 30650348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 5e-69; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 41664552 - 41664716
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41664552 gaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 41664651  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||  ||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  41664652 ctccacctgtctacgcactttcctttttcaaagctccgtcaggtataatctattccattgaatct 41664716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 7925342 - 7925178
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  7925342 gaacctgtggtggatcgtattaaatctagattgtctggttggncaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactg 7925243  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  7925242 ctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatct 7925178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 32267510 - 32267346
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||    
T  32267510 gaacctgttgtgaaccgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattcttcaaaagtccgtcatgactg 32267411  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| |||||||||   |||||||||||||||||||| ||||||    
T  32267410 ctctacctgtctatgcactttcctttttcaaagctttgtcaggtataatctcttccattgaatct 32267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 63 - 223
Target Start/End: Complemental strand, 8300755 - 8300595
Alignment:
Q  63 ctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgcttt 162  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||| || || |||||||| ||||||||||| ||||||||||||||||||||| |    
T  8300755 ctgttgtgaaccgtattaaatctagattggctggttggcaaagtcggtttctttccttcggtggccgtttgattcttctaaagtccgtcctgactgctct 8300656  T
Q  163 acctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||    
T  8300655 acctgtctatgcactttcctttttcaaagctccggcaggtataatctcttccattgaatct 8300595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 9923557 - 9923393
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || ||||| ||||||  |||||||||||||||||||||||| ||||| ||||| |||||||||||| |||| || ||||||||| ||||||    
T  9923557 gaacctgttgttaatcgcattaaaaatagattgtctggttggcaaagtcgattcctttcttttggtggtcgtttggttcttcttaagtccgtcttgactg 9923458  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || ||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  9923457 ctctacctgtctatacactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 9923393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 13878674 - 13878835
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || |||||||||||| || |||||||||||||||| ||||||||||| ||||| ||||||||| | ||||| || || | ||||||||||||      
T  13878674 cctgttgttaatcgtattaaaactcgattgtctggttggcatagtcggttcctttcttttggtggtcgtctaattcttctcaaattcgtcctgactgcac 13878773  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  13878774 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 13878835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 10530615 - 10530459
Alignment:
Q  60 aacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgc 159  Q
    ||||||| || ||||| ||||||||||||||||||| |||||| ||||||||| | ||||| ||||  ||  | || || |||||||||||||| |||||    
T  10530615 aacctgttgttaatcgaattaaatctagattgtctgcttggcatagtcggttcatttcttttggtgaccgcctaatccttctaaagtccgtcctaactgc 10530516  T
Q  160 tttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    | |  |||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10530515 tctttctgtttatgcactttcctttttcaaagctccttcaggtataatctcttccat 10530459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 23943034 - 23942879
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| ||||||||||||||||| |||||| | ||  | || || ||||||||||| || ||||| || || || || || |||||| |||| ||||    
T  23943034 gtgaatcgaattaaatctagattgtcgggttggaatagcagatttctctctttcggtggccgcttgatccttctcaaatcagttctgacttctttgcctg 23942935  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  23942934 tctatgctctttccttcttcaaagctccatcatgtataatctcttccattgaatct 23942879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 26774449 - 26774600
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||||| ||||||||| | ||||| || || ||||| | |||||||||||||||  | ||||| ||||||||| | |||||| ||||||| |    
T  26774449 attaaatctagattatctggttggaagagtcgttttctgtcttttgttggtcgtttgattctcattaagtctgtcctgacttcgttacctatctatgctc 26774548  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    | ||||||||||||||||| ||| ||||||||||||| || |||| ||||||    
T  26774549 tctccttcttcaaagctccgtcatgtataatctcttctattgaatatctttt 26774600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 43612378 - 43612533
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| ||||||||||||||||| |||||| | ||  |||| |||||||||||||| |||||||| || || ||  | || |||||| || | | ||    
T  43612378 gtgaatcgcattaaatctagattgtcgggttggaatagcaggtttctatctttcggtggccgtttgatccttcttaaagcagttctgacttctcttcatg 43612477  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  43612478 tctatgccctttcattcttgaaagctccatcaggtataatctcttccattgaatct 43612533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 14345116 - 14345268
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    ||||| ||||||||||||||||||||||| || ||||| ||| | ||||||||||| ||| | | ||| || ||||| ||||| ||| || |  ||||||    
T  14345116 aatcgcattaaatctagattgtctggttgtcatagtcgcttcatttctttcggtggacgtcttactctcctcaagtctgtcctaactactctgtctgtct 14345215  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||||||||||||  ||||||||| |||||||||||||||| |||||    
T  14345216 atgctctttccttcttcaagactccatcagatataatctcttccataaaatct 14345268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 6901887 - 6901729
Alignment:
Q  66 tggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatcttt-cggtggtcgtttgattctactaaagtccgtcctgactgctttac 164  Q
    |||||||||||||||||||||||||||| |||||| | || ||||| || ||||| |||||| |  ||||| || || || ||  | |||||| || | |    
T  6901887 tggtgaatcgtattaaatctagattgtcgggttggaatagccggtttctctcttttcggtggccacttgatcctccttaaatcgattctgacttctctgc 6901788  T
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
     ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  6901787 atgtctatgccctttccttcttcaaagctccattaggtataatctcttccattgaatct 6901729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 29721113 - 29721259
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||||||||||||||  || ||||| ||||| ||||| || ||||| || || |||||| | || ||||| |||||| |  |||| ||||||||||| |    
T  29721113 attaaatctagattgttagggtggcagagtcgtttcctctcattcgggggccgattgattttgctcaagtctgtcctgtcctctttgcctgtctatgctc 29721212  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  29721213 tttcctttttcaaagctccgtcaggtataatctcttccattgaatct 29721259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 16375287 - 16375451
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||| ||||||||||||||| |||  |||||| | |||||||| || ||||| |||||||| ||| ||||||| || || ||| ||||      
T  16375287 gaacctattgtgaaccgtattaaatctagactgttaggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacct 16375386  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | ||||||||| ||||||||||||||||| ||||| ||||||||||||| || || ||||||    
T  16375387 ctctgcctgtctatacactttccttcttcaaacctccaacaggtataatctcctctattgaatct 16375451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 20825241 - 20825091
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| || |||||||||||||||||||| ||| ||| ||| || || |||||||| |||||||| || || |  ||| |||||||  | ||||||||||    
T  20825241 cgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgattctgctcaaatatgtcttgactgcgcttcctgtctatg 20825142  T
Q  174 cactttcc-ttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||| || ||||||||||| ||||||||||||||||| || ||||||    
T  20825141 cactttccttttttcaaagctccgtcaggtataatctcttctattgaatct 20825091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 17659788 - 17659640
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    ||||||||||| ||| |||| |||||| ||||  | ||||| ||| ||||||| || || ||| || || |  ||||||| ||||||||  |||| ||||    
T  17659788 gtgaatcgtataaaagctaggttgtcttgttgaaatagtcgtttcttatcttttggaggccgtctggttttgttaaagtctgtcctgacctctttgcctg 17659689  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  17659688 tctatgcgctttccttcttaaaagctccatcaagtataatctcttccat 17659640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 17700424 - 17700272
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||| || |||||||||| ||||||||| ||| ||| ||  || || |||||||| ||||| || || || || ||| |||||||  | |||||||    
T  17700424 aatcgtataaagtctagattgtttggttggcatagtaggtaccattcctttggtggtcgattgatacttctcaaatctgtcttgactgcgcttcctgtct 17700325  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| || ||||||    
T  17700324 atgcactttcctttttcaaagctccgtcagatataatctcttctattgaatct 17700272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 24794583 - 24794512
Alignment:
Q  152 ctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  24794583 ctgacttctttgcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatct 24794512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 36158005 - 36157946
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36158005 cctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccattgaatct 36157946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 7453214 - 7453144
Alignment:
Q  153 tgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  7453214 tgacttctctacctgtctatgcactttctttcttcaaagctccatcaggtataatctcttcccttgaatct 7453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 4987252 - 4987397
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||| | ||||||||| |||| |||||| | ||||| ||||| ||||| ||||| |||||| |||| || || || ||  ||||  ||     
T  4987252 cctgttgtgaatcgtgtaaaatctagactgtcaggttggaatagtcgtttcctttcttttggtggccgtttggttcttctcaaatctgtgttgacctctc 4987351  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataat 207  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||    
T  4987352 tacctgtctatgctctttctttcttcaaagctccgtcaggtataat 4987397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 12332786 - 12332649
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||| ||||||||||| |   | ||||||||  |||| || ||||| |||||| |||| |||||||| ||| ||||  || ||||||||||||| |    
T  12332786 attaaatcgagattgtctgggttcaatagtcggtttttatcgtttggtggccgtttggttcttctaaagtctgtcttgacctctctacctgtctatgctc 12332687  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    | ||||||||||| ||||||||||||||||| ||||||    
T  12332686 tctccttcttcaaggctccatcaggtataatttcttcc 12332649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 11393608 - 11393679
Alignment:
Q  152 ctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| |||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  11393608 ctgacttctttgcctgtctatgctctttcattctttaaagctccatcaggtataatctcttccattgaatct 11393679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 36493321 - 36493182
Alignment:
Q  75 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgc 174  Q
    |||||||||| |||||||||||||   | ||||||||  |||| || ||||| || ||  |||| |||||||| ||| ||||  || |||||||||||||    
T  36493321 gtattaaatcgagattgtctggtttcaatagtcggtttttatcgtttggtggccggttagttctcctaaagtctgtcttgacctctctacctgtctatgc 36493222  T
Q  175 actttccttcttcaaagctccatcaggtataatctcttcc 214  Q
     |||||||||||||| ||||| ||||||||||| ||||||    
T  36493221 tctttccttcttcaaggctccgtcaggtataatttcttcc 36493182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 42176767 - 42176898
Alignment:
Q  85 tagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttc 184  Q
    ||||||||||||| || | ||||||||||| || ||  |||||||| |||||||||| || | |||| |||| ||  | ||||||||||||||||||||     
T  42176767 tagattgtctggtaggtatagtcggttcctttcctttagtggtcgtctgattctactcaaattcgtcttgacagcgcttcctgtctatgcactttccttt 42176866  T
Q  185 ttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||||   |||||||||||| |||||||    
T  42176867 ttcaaagctttttcaggtataatcccttccat 42176898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 45255034 - 45255181
Alignment:
Q  69 tgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgt 168  Q
    |||||||||||||| | || || ||||||||| | ||||| ||| ||||||| || || ||| || ||||  ||||||| || |||||  |  |  ||||    
T  45255034 tgaatcgtattaaagcaaggttatctggttggaatagtcgtttcttatcttttggcggccgtctggttcttttaaagtctgttctgacctcgctgtctgt 45255133  T
Q  169 ctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  45255134 ctatgcgctttcattcttcaaagctccatcaggtataatctcttccat 45255181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 5585881 - 5585751
Alignment:
Q  75 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgc 174  Q
    |||||||| |||||||||||| |||||||||  |||| |  ||  |||||||||| ||| |||| || ||||||||||| |||||  | |||||||||||    
T  5585881 gtattaaaactagattgtctgtttggcaaagctggtttccctccatcggtggtcgcttggttcttctgaagtccgtcctaactgcacttcctgtctatgc 5585782  T
Q  175 actttccttcttcaaagctccatcaggtata 205  Q
     || ||||||||||| ||||||||| |||||    
T  5585781 tctgtccttcttcaaggctccatcatgtata 5585751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 6245956 - 6245891
Alignment:
Q  143 aagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatc 208  Q
    ||||| |||||||| || |||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  6245956 aagtctgtcctgaccgcgttacttgtctatgctctttccttcttcaaagctccgtcaggtataatc 6245891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 12135072 - 12135015
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||    
T  12135072 tgtctatgcactttccttctttaaagcttcatcgggtataatctcttccattgaatct 12135015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 25194026 - 25193875
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    ||||| || |||||||| || ||||| ||||| || ||||||| ||||||||| ||||| ||  ||||||  ||| ||||  |  |  |||||||||| |    
T  25194026 attaagtccagattgtcggggtggcagagtcgctttctatcttacggtggtcggttgatccttttaaagtttgtcttgacctcgcttactgtctatgctc 25193927  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||||||||  |||||||||||||||  ||| |||||| ||||    
T  25193926 tttccttcttcaaagctctgtcaggtataatctctatcattgaatctatttt 25193875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 36025360 - 36025320
Alignment:
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  36025360 ctttccttcttcaaagctccgtcaggtataatctcttccat 36025320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 43611384 - 43611532
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||  |||||||||||| | || |||||| | ||  |||| |||||||||||||| || ||||| || || ||  | || |||||| || | ||||    
T  43611384 gtgaatcacattaaatctagactatcgggttggaatagcaggtttctatctttcggtggccgcttgatccttcttaaagcagttctgacttctcttcctg 43611483  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||  |||  |||||||||| || |||||||||||||||||||||    
T  43611484 tctatgcctttttattcttcaaagttctatcaggtataatctcttccat 43611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 28992510 - 28992560
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||||||| ||||||||||||||||  || ||||||||||||||||||||    
T  28992510 tgtctatgctctttccttcttcaaagtcccgtcaggtataatctcttccat 28992560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 5585538 - 5585481
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||| || | ||||||||| ||||||||| |||||||||||||||| ||||||    
T  5585538 tgtctatgctctgttcttcttcaaggctccatcatgtataatctcttccattgaatct 5585481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 41691007 - 41691120
Alignment:
Q  122 ggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    |||||||| |||||||| || ||||| |||||| || |  | ||||||||  | ||||| || |||| ||||||  ||||||||||||||||||| ||||    
T  41691007 ggtggtcgattgattctccttaagtctgtcctgtcttcactgcctgtctacaccctttcttttttcagagctcccgcaggtataatctcttccattgaat 41691106  T
Q  222 ctcttttgattaaa 235  Q
    || |||| ||||||    
T  41691107 ctattttaattaaa 41691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 18187995 - 18187947
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||||||||| |||||| ||||||||||||| ||||||| |||||||||    
T  18187995 ctgtctatgctctttccatcttcaaagctccgtcaggtacaatctcttc 18187947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 350
Target Start/End: Complemental strand, 7453116 - 7453017
Alignment:
Q  251 agtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttgaatgtttttaata 350  Q
    |||||||||||||||||||| || ||| | | |||||  ||| | |||| |  |||||||||||| ||||| ||||| |||||||||||||  |||||||    
T  7453116 agtgaggatcatagaaaaatttcctggataggttggaaaactgtttgttcaaaaaaggagtatggaggtttgggggtgagacagttgaatgaatttaata 7453017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 8445652 - 8445605
Alignment:
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||||||||| |||||||| || |||||||| ||||||    
T  8445652 ctttccttcttcaaagctccttcaggtatcatttcttccattgaatct 8445605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 37165431 - 37165474
Alignment:
Q  185 ttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||    
T  37165431 ttcaaagctccgtcaggtataatctcttccattgaatctatttt 37165474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 4991987 - 4992049
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||  |||||||||||||||||||  |||| ||||||||||||||  |||||| ||||    
T  4991987 tgtctatgatctttccttcttcaaagctctgtcagatataatctcttccactgaatctatttt 4992049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 16839115 - 16839229
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||| |||||||||||  || || |||| ||||| |||||  || || ||||||| ||||| ||||| || ||||| |||||| ||||||||||||| ||    
T  16839115 tatccttcggtggtcgcctggttttactgaagtctgtcctatcttctctacctgtttatgcgctttcttttttcaaggctccagcaggtataatctcctc 16839214  T
Q  214 catagaatctctttt 228  Q
     || |||||| ||||    
T  16839215 tattgaatctatttt 16839229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 12341418 - 12341361
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    |||||||| || |||||||| ||||||||||  || ||||||||||||||||| ||||    
T  12341418 cctgtctacgctctttcctttttcaaagctctgtcgggtataatctcttccattgaat 12341361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 15539937 - 15539868
Alignment:
Q  135 ttctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    |||| |||||||| ||| ||||  || | ||||| ||||| |||||||||||||||||||| ||||||||    
T  15539937 ttcttctaaagtctgtcttgacctctctgcctgtttatgctctttccttcttcaaagctccgtcaggtat 15539868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 12135168 - 12135136
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttgg 100  Q
    |||||||||||||||||||||||||| ||||||    
T  12135168 gtgaatcgtattaaatctagattgtcaggttgg 12135136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 43249100 - 43249152
Alignment:
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| |||| |||||| |||| |||||||||||||||||||| ||| ||||||    
T  43249100 atgctcttttcttctttaaagttccatcaggtataatctctttcattgaatct 43249152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 2554561 - 2554397
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  2554561 gaacctgttgtgaatcgtattaaatctagattgtctggttgacaaagtcggttcctttctttcggtggtcgtttgattctactaaagttcgtcctgactg 2554462  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||    
T  2554461 ctctacctgtctatgcactttcctttttcaaagctccgtcgggtataatctcttccattgaatct 2554397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 24766608 - 24766755
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||          ||||| |||||||||||||||||||    
T  24766608 gaacctgttgttaatcgtattaaaactagattgtctggttggcaaagtcggttcctttctttcgg----------attcttctaaagtccgtcctgactg 24766697  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  24766698 ctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccat 24766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 26206289 - 26206125
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | |||||||| |||||||| |||||||| ||| |||| || || || ||||||||      
T  26206289 gaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacct 26206190  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  26206189 ctttgcctgtctatgcactttccttcttcaaagctccatcaggtataatctcctctattgaatct 26206125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 12673318 - 12673479
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| ||||||||| || ||||||||||||||| |||  | || ||||||||||| ||||| || |||| ||  |||||||||||| | ||||||||||    
T  12673318 cgtataaaatctagactggctggttggcaaagtcagtttttttccttcggtggtcgcttgatccttctaatgtatgtcctgactgctctgcctgtctatg 12673417  T
Q  174 cactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    | |||||||||||||| | ||||||  |||||||||||||||||||||||||||||| ||||    
T  12673418 ctctttccttcttcaacgatccatctagtataatctcttccatagaatctcttttgaataaa 12673479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 13938656 - 13938510
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||| |||||||||||||| |||| ||||||||||| ||||| ||||| || ||||| || || || || |||||||||||  | ||| ||||||| |    
T  13938656 attaaagctagattgtctggtcggcatagtcggttcctttcttttggtggccgattgatccttctcaaatctgtcctgactgcacttcctatctatgctc 13938557  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  13938556 tttcctttttcaaagctccgtcaggtataatctcttccattgaatct 13938510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 15674788 - 15674624
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | || ||||| || ||||| |||||||| | | ||||||| || || ||| ||||      
T  15674788 gaacctattgtgaatcgtattaaatctagactgtcgggttggaatagacggtttctctcttttggtggtcgctgggttctactcaaatctgtcttgacct 15674689  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || | ||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||    
T  15674688 ctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatctcctctattgaatct 15674624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 15956160 - 15956324
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| || ||||| |||||| ||| ||||||||||||||| ||||||||||| ||||| |||||||| || || || ||| ||| |||||| ||||    
T  15956160 gaacctgttgttaatcgaattaaaactatattgtctggttggcatagtcggttcctttcttttggtggtcgcttaatccttctatagttcgtcctaactg 15956259  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |  | ||||| |||| ||||||||| ||||||||||  | |||||||||||||||||| ||||||    
T  15956260 cgcttcctgtttatgtactttcctttttcaaagctcagttaggtataatctcttccattgaatct 15956324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 18681770 - 18681922
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||||||| |||||||| |||||||||| ||||||||||| | ||| |||||||||||||| || || || || |||||||||    | |||||||    
T  18681770 aatcgtattaaagctagattgactggttggcatagtcggttcctttattttggtggtcgtttgatcctgctcaaatctgtcctgactagacttcctgtct 18681869  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | || |||||||| |||||||||||||| |||||||||||| |||| ||||||    
T  18681870 acgctctttcctttttcaaagctccatcgggtataatctctcccattgaatct 18681922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 11060055 - 11060203
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    ||||||||||| ||| |||| |||||||||||| | ||||| ||  ||||||| ||||| ||| || || |  ||||||| ||||||||   ||| ||||    
T  11060055 gtgaatcgtataaaagctaggttgtctggttggaacagtcgttttttatcttttggtggccgtctggttttgttaaagtctgtcctgacctttttgcctg 11060154  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11060155 tctatgcgctttccttcttcaaagttccatcaggtataatctcttccat 11060203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 17605530 - 17605682
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||| || |||||||||||| ||||||| | | ||| ||| || || |||||||||||||| || || || || ||| |||||||  | |||||||    
T  17605530 aatcgtataaagtctagattgtctagttggcataataggtacctttcctttggtggtcgtttgatacttctcaaatctgtcttgactgcgcttcctgtct 17605629  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| |||||||| ||||||||||||||||||||||||||||| || ||||||    
T  17605630 atgcgctttcctttttcaaagctccatcaggtataatctcttctattgaatct 17605682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 21629330 - 21629469
Alignment:
Q  83 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcct 182  Q
    |||||||||||||||||||| ||| ||| ||| || || |||||||| ||||| || || || || ||| |||||||  | |||||||||||||||||||    
T  21629330 tctagattgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcactttcct 21629429  T
Q  183 tcttcaaagctccatcaggtataatctcttccatagaatc 222  Q
    | ||||||||||| ||||||||||||||||| || |||||    
T  21629430 ttttcaaagctccgtcaggtataatctcttctattgaatc 21629469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 17576916 - 17577065
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| || |||||||||||||||||||| ||| ||| ||| || || ||| |||| |||||||| || || || ||| |||||||  | |||||||||     
T  17576916 cgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtagtcgcttgattctgctcaaatctgtcttgactgcgcttcctgtctatt 17577015  T
Q  174 cactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||| ||||||||||| ||||||||||||||||| || ||||||    
T  17577016 cactttcctttttcaaagctccgtcaggtataatctcttctattgaatct 17577065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 649266 - 649414
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||| || ||| |||| |||||| ||||| | ||||| || |||||||| || || ||| || || |  ||||||| || |||||  || | ||||    
T  649266 gtgaatcgcataaaagctaggttgtctagttggaatagtcgttttctatcttttggcggccgtctggttttgttaaagtctgttctgacctctctgcctg 649365  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  649366 tctatgcgctttccttcttcaaagctccatcaggtataatctcttccat 649414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 18589276 - 18589140
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||| ||||||||||||||||||||||||||| ||||||| || |||||||| ||||||| ||| || ||||| ||| ||||  || | | |||  |      
T  18589276 cgtataaaatctagattgtctggttggcaaagttggttcctctccttcggtggccgtttgactctgcttaagtctgtcttgaccactcttcatgttca-- 18589179  T
Q  174 cactttccttcttcaaagctccatcaggtataatctctt 212  Q
    | |||||||||||||| ||||||||||||||||||||||    
T  18589178 ctctttccttcttcaaggctccatcaggtataatctctt 18589140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 19350870 - 19350752
Alignment:
Q  89 ttgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttca 188  Q
    ||||| || ||||||||||| || ||||||||||| ||||||||| |||| || ||||| || |||| | |  | |||||||||| ||||||||||||||    
T  19350870 ttgtcggggtggcaaagtcgttttctatctttcgggggtcgtttggttcttcttaagtctgtactgagttcgcttcctgtctatgtactttccttcttca 19350771  T
Q  189 aagctccatcaggtataat 207  Q
    ||||||| |||||||||||    
T  19350770 aagctccgtcaggtataat 19350752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 13086499 - 13086335
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| |||||| | |||||||||||| ||||  ||||| | || ||||| || || ||||||||||| ||| | ||  | ||  | || ||||||     
T  13086499 gaacctgttgtgaatagaattaaatctagactgtcaagttggaatagccggtttctttcgttcggtggtcgcttggtccttttgaaagcagttctgactt 13086400  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  13086399 ctttgcctgtttatgctctttccttctttaaagctccatcaggtataatctctttcattgaatct 13086335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 77 - 211
Target Start/End: Original strand, 14686210 - 14686344
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||| |||  || ||||||||||| ||||| ||||  || ||||| ||| | || || || || |||||| | || |||||||||||||| |    
T  14686210 attaaatctagactgttggggtggcaaagtcgtttcctttcttatggaggtcggttggtccttctgaattctgtcctgtccgcattacctgtctatgctc 14686309  T
Q  177 tttccttcttcaaagctccatcaggtataatctct 211  Q
    ||||||||||||| ||||| |||||||||||||||    
T  14686310 tttccttcttcaaggctccgtcaggtataatctct 14686344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 17078251 - 17078408
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||| || ||| |||| |||||||||||| | ||||  ||  ||||||| || || ||| || ||||  ||||||| || |||||      
T  17078251 gaacctattgtgaatcgaataaaagctaggttgtctggttggaatagtctttttttatcttttggcggccgtatggttctgttaaagtcagttctgacct 17078350  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || |  |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17078351 ctctgtctgtttatgcgctttccttcttcaaagctccatcaggtataatctcttccat 17078408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 7956048 - 7956134
Alignment:
Q  251 agtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttga 338  Q
    |||||||||||||| ||||||| |||||| |  ||||||||||| ||||  |||||||||||||| |||||||| |||||||||||||    
T  7956048 agtgaggatcataggaaaatatattgggtaggatggaggactatttgttg-cgaaaggagtatggaggtttaggagttagacagttga 7956134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 21549792 - 21549639
Alignment:
Q  69 tgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgt 168  Q
    ||||||| |||||||||||| || | |||||| | ||| | || || ||||| ||||| || |||||||| || || || || |||||  || | | |||    
T  21549792 tgaatcgcattaaatctagactgac-ggttggaatagtagatttctctcttttggtggccgcttgattctcctcaaatcagttctgacatctctgcttgt 21549694  T
Q  169 ctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  21549693 ctatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatct 21549639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 14843345 - 14843490
Alignment:
Q  83 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttcct 182  Q
    |||||||| || || ||||||||| | |  || ||||| || ||||| |||||||| || ||| | ||| ||||  | || ||||||||||| |||||||    
T  14843345 tctagattatcggggtggcaaagtagctatctctcttttgggggtcggttgattcttctcaagactgtcttgacctcattgcctgtctatgccctttcct 14843444  T
Q  183 tcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||||| |||||||||||||||  ||| |||||| ||||    
T  14843445 tcttcaaagctccgtcaggtataatctctgtcattgaatctatttt 14843490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 1307906 - 1308026
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||||| || |||||| |||||||| || |||||||||||| || |  | |||||||| |  ||||| || |||| ||||||| ||||||||||||||||    
T  1307906 tatcttacgatggtcgcttgattctccttaagtccgtcctgtcttcactgcctgtctacgtcctttcttttttcagagctccagcaggtataatctcttc 1308005  T
Q  214 catagaatctcttttgattaa 234  Q
    ||| |||||| |||| |||||    
T  1308006 cattgaatctattttaattaa 1308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 25351074 - 25351010
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||  ||| |||||| ||||    
T  25351074 cctgtctatgctctttccttcttcaaagctccgtcaggtataatctctatcattgaatctatttt 25351010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 11469412 - 11469365
Alignment:
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11469412 ctttccttcttcaaagctccatcaggtttaatctcttccattgaatct 11469365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 13563219 - 13563276
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||| |||||| ||||    
T  13563219 cctgtctatgctctttcctttttcaaagctccgtcaggtataatcttttccattgaat 13563276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 33640870 - 33640725
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| ||||||||||| || |||||| |||| |||||| | ||||| ||||| ||||| ||||| |||||| |||| || || || ||  ||||  ||     
T  33640870 cctgttgtgaatcgtataaagtctagactgtcaggttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctc 33640771  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataat 207  Q
    | ||||||||||| ||||| |||||||||||||  || ||||||||    
T  33640770 tgcctgtctatgctctttctttcttcaaagctctgtcgggtataat 33640725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 502821 - 502868
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctct 211  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  502821 cctgtctatgctctttctttcttcaaagctccgtcaggtataatctct 502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 1104237 - 1104284
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctctt 212  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  1104237 ctgtctatgctctttccttcttcaaagctccattaggtacaatctctt 1104284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 14372293 - 14372351
Alignment:
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    ||||||| |||||||||||  ||||||||||||||||||| |||||||| || ||||||    
T  14372293 tttcctttttcaaagctccgccaggtataatctcttccattgaatctctgttaattaaa 14372351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 26514653 - 26514512
Alignment:
Q  87 gattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttctt 186  Q
    ||||||| || ||||| ||||| || |||||||| |||||||||||| | ||  | ||||| ||| ||||  |  | ||||||||||| ||||| |||||    
T  26514653 gattgtcggggtggcatagtcgctttctatcttttggtggtcgtttggtccttttgaagtcggtcttgacctcgcttcctgtctatgctctttctttctt 26514554  T
Q  187 caaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||  ||||||||| |||||  ||| |||||| ||||    
T  26514553 caaagctctgtcaggtatactctctatcattgaatctatttt 26514512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 502908 - 502996
Alignment:
Q  251 agtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttgaa 339  Q
    |||||||||||||| ||||| |||||| | | ||||||  || | ||| ||| |||||||| ||| || ||||||||||||||||||||    
T  502908 agtgaggatcataggaaaatgtcttggataggttggagctctgtttgtctacaaaaggagtttggagggttaggggttagacagttgaa 502996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 12687041 - 12687105
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||| |||||||| |||||| |||||||||||||  |||| || || |||||||||||    
T  12687041 cctgtctatgctctttcctttttcaaaactccatcaggtattgtctcctctattgaatctctttt 12687105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 28575763 - 28575819
Alignment:
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgatta 233  Q
    ||||||||||||||||| ||||||||||||| ||||| || |||||| | |||||||    
T  28575763 tttccttcttcaaagcttcatcaggtataatatcttctattgaatctttattgatta 28575819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 32186622 - 32186482
Alignment:
Q  76 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    ||||||||||||| ||||    ||||| ||||| || |||||||| || || || |||||||| || ||||| ||||||||  |  | ||||||||  |     
T  32186622 tattaaatctagactgtcaaagtggcagagtcgctttctatcttttgggggccgcttgattcttcttaagtctgtcctgacctcgcttcctgtctacact 32186523  T
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||| ||||||||||||||  ||| |||||||||||||||    
T  32186522 ctttctttcttcaaagctccgacagatataatctcttccat 32186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 7955893 - 7955948
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcct 114  Q
    |||||| |||| || || || |||||||||||||||||||||||||| ||||||||    
T  7955893 gaacctatggttaaccgcataaaatctagattgtctggttggcaaagccggttcct 7955948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 10363059 - 10362972
Alignment:
Q  102 aaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaa 189  Q
    |||||||||| || || || |||||||||||  |||| || ||||| ||| ||||  || ||||||||||||| ||||||||||||||    
T  10363059 aaagtcggtttctgtcgtttggtggtcgtttagttcttctcaagtctgtcttgacctctctacctgtctatgctctttccttcttcaa 10362972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 33753460 - 33753519
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||| || || ||||| |||||||||||  ||||||||||||||||||| ||||||    
T  33753460 cctgtctacgccctatcctttttcaaagctcccgcaggtataatctcttccatcgaatct 33753519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 20497735 - 20497673
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||| |||||||||| ||||||| | ||| |||| |||||||| || |||||||||||    
T  20497735 tgtctatgctctttccttctgcaaagcttcctcatgtatcatctcttctattgaatctctttt 20497673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 19616168 - 19616237
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgatta 233  Q
    ||||||||||| ||||| || || | ||||||  ||||||||||||||||||| |||||| |||| ||||    
T  19616168 cctgtctatgccctttctttttttagagctcctgcaggtataatctcttccattgaatctattttaatta 19616237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 27104141 - 27104181
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||| |||||||| ||||| ||||||||||||||    
T  27104141 cctgtctatgctctttcctttttcaaggctccatcaggtat 27104181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 27145955 - 27145995
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    ||||||||||| |||||||| ||||| ||||||||||||||    
T  27145955 cctgtctatgctctttcctttttcaaggctccatcaggtat 27145995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 4208 - 4044
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||||| ||||| |||||||||||||| |||||||||| ||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  4208 gaacctgttgtgaaccgtattaaatctaggttgtctggttcgcaaagttggttcctttccttcggtggtcgtttgattcttctaaagtccgtcctgactg 4109  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  4108 ctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatct 4044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 44028397 - 44028572
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    ||||||||||| || ||||| ||||||||| |||||| ||||||||||||||| || || |||||||  ||||| ||||| |||||||| ||| |||| |    
T  44028397 gaacctgtggttaaccgtataaaatctagactgtctgattggcaaagtcggtttctctccttcggtgaccgtttaattctcctaaagtctgtcttgaccg 44028496  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaa 234  Q
    || || |||||||||| |||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||    
T  44028497 ctctatctgtctatgctctttccttcttcaaggctccatcatgtataatctcttctattgaatctcttttgattaa 44028572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 13551538 - 13551374
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||||||||| |||| |||||| | |||||||| |||||||| |||||||| ||| |||| || || || ||||||||      
T  13551538 gaacctattgtgaatcgtattaaatctagactgtcaggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacct 13551439  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  13551438 ctttgcctgtctatgcactttccttcttcaaagctccatcaggtataatctcctctattgaatct 13551374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 33515389 - 33515534
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||| ||||| ||||||| |  || ||||||||||||||  | |||||||    
T  33515389 aatcgtataaaatctagattgtctggttggcatagtcggttcctttcttttggtagtcgtctgattcttcgcaaatccgtcctgactgcacttcctgtct 33515488  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  33515489 atgcactttcctttttcaaagctccgtcaggtacaatctcttccat 33515534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 28253684 - 28253509
Alignment:
Q  60 aacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgc 159  Q
    ||||||| || ||||| |||||||||||| |||||||||| |  |||||||| || ||||| ||||||||  | || || || |||||||||||||||||    
T  28253684 aacctgttgttaatcgaattaaatctagactgtctggttgtcgtagtcggtttctctcttttggtggtcgcctaatccttctcaagtccgtcctgactgc 28253585  T
Q  160 tttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    | | | |||||||||||||||||| ||||||| | | |||||||||||||||||||| |||||||| || ||||||    
T  28253584 tcttcatgtctatgcactttcctttttcaaagtttcgtcaggtataatctcttccattgaatctctgttaattaaa 28253509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 13416642 - 13416473
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    ||||||||||| || ||||| ||||||||| |||||  ||||||||||||||| || || || || ||||| |||||||| ||||||||  || |||| |    
T  13416642 gaacctgtggttaaccgtataaaatctagactgtctaattggcaaagtcggtttctttcatttggaggtcgcttgattcttctaaagtctatcttgaccg 13416543  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |  ||| ||||||||| |||||||||||||| |||||| |||||| ||||||||||||||||||| ||||    
T  13416542 cgctacatgtctatgctctttccttcttcaaggctccagcaggtacaatctcttccatagaatctatttt 13416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 12646494 - 12646342
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    |||||||||||||||||||||||  ||||||| ||||||||||| || || ||||||||  | ||||| || || |||||||| |||||  | |||||||    
T  12646494 aatcgtattaaatctagattgtcaagttggcatagtcggttcctctcctttggtggtcgcctaattcttctcaaatccgtcctaactgcgcttcctgtct 12646395  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||| ||||||    
T  12646394 atgctctttcctttttcaaagctccgccaggtataatctcttccattgaatct 12646342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 28399746 - 28399898
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    ||||| |||||||||||| |||| |||||||| ||| |||| || ||||| ||||| ||||||||||| ||||| || || |||||  || | |||||||    
T  28399746 aatcgcattaaatctagactgtcgggttggcatagtaggtttctctcttttggtggacgtttgattctcctaaaatcagttctgacatctctgcctgtct 28399845  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  28399846 atgctctttctttcttcaaagctccagcaggtataatctcttccattgaatct 28399898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 8065454 - 8065609
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||||||||||||||||||||| |||||| | ||  | || || ||||||||||| ||||||||  | || || || || |||||| ||||  |||    
T  8065454 gtgaatcgtattaaatctagattgtcgggttggaatagcagatttctctctttcggtggccgtttgatcattctcaaatcagttctgacttctttgtctg 8065553  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8065554 tctatgctttttccttcttcaaagctccatcaggtataatctcttccattgaatct 8065609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 2207021 - 2207163
Alignment:
Q  74 cgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatg 173  Q
    ||||||||||||||| ||||  |||||||||||||||| || || || || ||||||||||||||  ||||||||||| || | ||  ||||||||||||    
T  2207021 cgtattaaatctagactgtccagttggcaaagtcggtttctttcctttggaggtcgtttgattcttgtaaagtccgtcttgtccgcgctacctgtctatg 2207120  T
Q  174 cactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    | |||||||||||||| |||||| |||||| ||||||||||||    
T  2207121 ctctttccttcttcaaggctccagcaggtacaatctcttccat 2207163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 6724816 - 6724985
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    ||||||||||| || ||||| ||||||||| ||||| |||||||||||||||| || || || || ||||||||||||||  ||||||  ||| |||  |    
T  6724816 gaacctgtggttaaccgtataaaatctagactgtctagttggcaaagtcggtttctttcatttggaggtcgtttgattcttttaaagtatgtcttgatcg 6724915  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
       ||||||||||||| |||||||||||||| |||||| |||||| ||||||||||||||| ||| ||||    
T  6724916 tgctacctgtctatgctctttccttcttcaaggctccagcaggtacaatctcttccatagattctatttt 6724985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 20004883 - 20004747
Alignment:
Q  77 attaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcac 176  Q
    |||||||||||||||||||||||| | | ||  ||  | ||||| ||||||||||||||| | || |||   ||||||||| | |||||||||||| | |    
T  20004883 attaaatctagattgtctggttggaagattcactttttgtcttttggtggtcgtttgattttccttaagattgtcctgacttcgttacctgtctatactc 20004784  T
Q  177 tttccttcttcaaagctccatcaggtataatctcttc 213  Q
    | |||||||||||||||| ||||||||||||||||||    
T  20004783 tctccttcttcaaagctctatcaggtataatctcttc 20004747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 35488785 - 35488630
Alignment:
Q  68 gtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctg 167  Q
    |||||||||||||||||||||||||| || ||| | |   | || || ||||||||||| || ||||| || || || || || |||||  |||| ||||    
T  35488785 gtgaatcgtattaaatctagattgtcgggatggaataacagatttctctctttcggtggccgcttgatccttctcaaatcagttctgacctctttgcctg 35488686  T
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||    
T  35488685 tctatgctttttccttctttaaagctccttcaggtataatctcttccattgaatct 35488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 15018528 - 15018469
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  15018528 cctgtctatgcactttccttcttcaaagctccgtcaggtataatctctaccattgaatct 15018469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 45422407 - 45422312
Alignment:
Q  128 cgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| ||||| |||| || ||| ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||||    
T  45422407 cgtttggttctattaaaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatct 45422312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 11233676 - 11233837
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||| | |||||||||||| |||| |||||| | |  ||||| || || ||||||||||| ||| | ||  | ||  | || |||||| |||    
T  11233676 cctgttgtgaatagaattaaatctagactgtcaggttggaataaccggtttctctcgttcggtggtcgcttggtccttttgaaagcagttctgacttctt 11233775  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||| ||||| ||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  11233776 tgcctgtttatgctctttccttctttaaagctccatcaggtatagtctcttccattgaatct 11233837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 32192000 - 32191843
Alignment:
Q  71 aatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtct 170  Q
    ||||| |||||||||||||||||||||||| | ||| | || || ||||| |||||| |||||||||| || || |  ||  ||||| | ||||||| |     
T  32192000 aatcgcattaaatctagattgtctggttggaagagttgctttctttcttttggtggttgtttgattctccttaaatttgtattgacttcgttacctggcc 32191901  T
Q  171 atgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||| || || |||||||||||||| |||||||||| ||||||  | |||||||||||    
T  32191900 atgctctctctttcttcaaagctccttcaggtataacctcttctgttgaatctctttt 32191843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 33583629 - 33583769
Alignment:
Q  76 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    |||||||||||||||||| || ||||||||||| || ||||| | ||| || || ||  || | || ||||  ||||||||  |  | |||||||||||     
T  33583629 tattaaatctagattgtcggggtggcaaagtcgatttctatcatccgggggccggttcgtttttctcaagtttgtcctgacctcgcttcctgtctatgct 33583728  T
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  33583729 ctttcctttttcaaagctccgtcaggtataatctcttccat 33583769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 25380687 - 25380742
Alignment:
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  25380687 tctatgcactttctttcttcaaagctccatcaggtataatctcttctattgaatct 25380742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 44028597 - 44028684
Alignment:
Q  252 gtgaggatcatagaaaaatatcttgggtggattggaggactatctgtttacgaaaggagtatggtggtttaggggttagacagttgaa 339  Q
    |||||||| ||||||||||||||||||| |  ||||||  | | |||||||||||||||||||| ||||| || ||||||||||||||    
T  44028597 gtgaggattatagaaaaatatcttgggtaggatggaggtatgtgtgtttacgaaaggagtatggaggtttgggtgttagacagttgaa 44028684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 3153058 - 3153179
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttc 213  Q
    |||||| ||||| ||| |||||||| || ||||| |||||| || |  | |||||||| || ||||| || |||||||||||  ||||||||||||||||    
T  3153058 tatcttacggtgatcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcaaagctcccgcaggtataatctcttc 3153157  T
Q  214 catagaatctcttttgattaaa 235  Q
    ||| |||||| |||| ||||||    
T  3153158 cattgaatctattttaattaaa 3153179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 9668193 - 9668354
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| |||||| | ||||||||||||||||| |||||| | |  ||||| || || ||||||||||| ||| | ||  | ||  | || |||||| | |    
T  9668193 cctgttgtgaatagaattaaatctagattgtcaggttggaataaccggtttctctcgttcggtggtcgcttggtccttttgaaagcagttctgacttcgt 9668292  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |  |||||||||| || |||||||| ||||||||||||| ||||||||||||||| ||||||    
T  9668293 tgtctgtctatgctctgtccttctttaaagctccatcagatataatctcttccattgaatct 9668354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 26147095 - 26147016
Alignment:
Q  135 ttctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||| |||||||| ||| ||||  || ||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  26147095 ttcttctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcc 26147016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 14440613 - 14440536
Alignment:
Q  146 tccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| |||||||  | ||||| |||||||||||||| || |||||||| ||||||||||||||||| || ||||||    
T  14440613 tccgtcttgactgcgcttcctgtttatgcactttccttttttaaagctccgtcaggtataatctcttctattgaatct 14440536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 43311112 - 43311060
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  43311112 tacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcc 43311060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 6824310 - 6824222
Alignment:
Q  114 tatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtat 204  Q
    |||||||||| || |||||  |||| || || || |||||||| ||||  |||||||||||||||||||||||||||||||| ||| ||||    
T  6824310 tatctttcggaggccgtttagttcttcttaaatctgtcctgaccgctt--cctgtctatgcactttccttcttcaaagctccgtcaagtat 6824222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 34357663 - 34357602
Alignment:
Q  160 tttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaat 221  Q
    ||||||||||||||| |||||||||||||| ||||| | || |||||| |||||||| ||||    
T  34357663 tttacctgtctatgctctttccttcttcaaggctccgttagatataatttcttccattgaat 34357602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 10289355 - 10289419
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||||| |||||||||||||||||||| ||| |||| ||| | || || |||||||||||    
T  10289355 cctgtctatgctctttccttcttcaaagctccctcaagtatcatcgcctctattgaatctctttt 10289419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 18669461 - 18669552
Alignment:
Q  119 ttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctc 210  Q
    |||||||| ||||| ||||| || || |||||| || || || | |||||||| || ||||| |||||||||||||  ||||||||||||||    
T  18669461 ttcggtggccgttttattctccttaaatccgtcatgtcttctcttcctgtctacgccctttctttcttcaaagctctctcaggtataatctc 18669552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 39116308 - 39116370
Alignment:
Q  166 tgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||||||| |||||||| ||||| ||||||||||||||  |||| || || |||||||||||    
T  39116308 tgtctatgctctttcctttttcaaggctccatcaggtattgtctcctctattgaatctctttt 39116370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 43722321 - 43722367
Alignment:
Q  170 tatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    ||||| |||||||||||||| ||||| ||||||||||| ||||||||    
T  43722321 tatgctctttccttcttcaaggctccgtcaggtataatttcttccat 43722367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 6787785 - 6787748
Alignment:
Q  250 aagtgaggatcatagaaaaatatcttgggtggattgga 287  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  6787785 aagtgaggatcataggaaaatatcttgtgtggattgga 6787748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 22724729 - 22724786
Alignment:
Q  165 ctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatc 222  Q
    |||||||||| ||||||||||| |||||| | | ||||||||||||| |||| |||||    
T  22724729 ctgtctatgctctttccttctttaaagcttcgttaggtataatctctaccattgaatc 22724786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 45717991 - 45717939
Alignment:
Q  176 ctttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    |||||||||||||| || ||  |||||||||||||||| ||||||||| ||||    
T  45717991 ctttccttcttcaaggcccccgcaggtataatctcttctatagaatctatttt 45717939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 497 - 336
Alignment:
Q  62 cctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctt 161  Q
    ||||| || |||||||||||||||||||| ||||||||||| ||||||||||| || || ||||||||  ||||||| || || |||||||| |||||      
T  497 cctgttgttaatcgtattaaatctagattttctggttggcatagtcggttcctctcctttggtggtcgcctgattcttctcaaatccgtcctaactgcgc 398  T
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    | ||||||||||| |||||||| ||||||||||| ||| ||||||||||||| || ||||||    
T  397 ttcctgtctatgctctttcctttttcaaagctccgtcaagtataatctcttcaattgaatct 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 183071 - 182914
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | ||||||||||||||| |||| |||||||||||| | ||||| ||  ||||||| || || |   || ||||  ||||||| || |||||      
T  183071 gaacctatcgtgaatcgtattaaagctaggttgtctggttggaacagtcgttttttatcttttggcggccacctggttctgttaaagtcggttctgacct 182972  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || | |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  182971 ctctgcctgtctatgcactttccttcttcaaagctccattaggtataatctcttccat 182914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 8488 - 8331
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||| |||||| |||| |||||||||||| | ||||| ||  ||||||  || ||  || || ||||  ||||||| ||||||||      
T  8488 gaacctattgtgaatcgcattaaaactaggttgtctggttggaatagtcgttttttatcttatggcggctgtctggttcttttaaagtctgtcctgacct 8389  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  8388 ctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatctattccat 8331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 13422 - 13265
Alignment:
Q  59 gaacctgtggtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactg 158  Q
    |||||| | |||||||| |||||| |||| |||||||||||| | ||||| ||  ||||||  || ||  || || ||||  ||||||  ||||| ||      
T  13422 gaacctattgtgaatcgcattaaaactaggttgtctggttggaatagtcgttttttatcttatggcggctgtctggttcttttaaagtttgtccttacct 13323  T
Q  159 ctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccat 216  Q
    || | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  13322 ctctgcctgtctatgcgctttccttcttcaaagctccatcaggtataatctattccat 13265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 1093 - 1160
Alignment:
Q  168 tctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctcttttgattaaa 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  1093 tctatgcactttccttcttcaaggctccatcaggtataatctcttctatataatatcttttgagtaaa 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 14948 - 15009
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  14948 tacctgtctatgctctttccttcttcaaagatccaccaggtataatctcttccattgaatct 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 8491 - 8396
Alignment:
Q  128 cgtttgattctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    |||||| ||||  |||| || ||| ||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | ||||||    
T  8491 cgtttggttctgttaaaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatct 8396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 28654 - 28575
Alignment:
Q  135 ttctactaaagtccgtcctgactgctttacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    |||| |||||||| ||| ||||  || ||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  28654 ttcttctaaagtctgtcttgacctctctacctgtctatgctctttccttcttcaaggctccgtcaggtataatttcttcc 28575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 63589 - 63653
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttccatagaatctctttt 228  Q
    ||||| ||||| |||||||||||||| ||| | |||||||||||||||||||| |||||| ||||    
T  63589 cctgtttatgctctttccttcttcaaggcttcttcaggtataatctcttccattgaatctatttt 63653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 3837 - 3887
Alignment:
Q  164 cctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||| ||||| |||||||||||||||||||||||| | ||||||    
T  3837 cctgtctatgccctttctttcttcaaagctccatcaggtatactttcttcc 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 7030 - 6902
Alignment:
Q  76 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctttacctgtctatgca 175  Q
    ||||||| |||||||| | || ||||||||||| ||| |||| ||||| || ||||| ||||| || || |  ||| ||||  |  | |||||||||||     
T  7030 tattaaaactagattggcggggtggcaaagtcgcttcttatccttcgggggccgtttaattcttctcaaatatgtcttgacctcgcttcctgtctatgct 6931  T
Q  176 ctttccttcttcaaagctccatcaggtat 204  Q
    |||||||| ||||||||||| ||||||||    
T  6930 ctttcctttttcaaagctccgtcaggtat 6902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 55518 - 55466
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||||| |||||||||||||| ||| ||| ||||||||| ||||||    
T  55518 tacctgtctatgctctttccttcttcaaggcttcattaggtataatttcttcc 55466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 143115 - 143167
Alignment:
Q  162 tacctgtctatgcactttccttcttcaaagctccatcaggtataatctcttcc 214  Q
    ||||||||||||| |||||||||||||| ||| ||| ||||||||| ||||||    
T  143115 tacctgtctatgctctttccttcttcaaggcttcattaggtataatttcttcc 143167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 67918 - 67872
Alignment:
Q  177 tttccttcttcaaagctccatcaggtataatctcttccatagaatct 223  Q
    ||||||||||||||||||  | |||||||||||||||||| ||||||    
T  67918 tttccttcttcaaagctctgtaaggtataatctcttccattgaatct 67872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University