View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1244_low_53 (Length: 203)

Name: NF1244_low_53
Description: NF1244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1244_low_53
NF1244_low_53
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-74)||(80564-80637)
[»] chr7 (19 HSPs)
chr7 (1-66)||(28486280-28486345)
chr7 (1-74)||(7471489-7471562)
chr7 (1-74)||(38394693-38394766)
chr7 (1-69)||(7351159-7351227)
chr7 (1-74)||(36157-36230)
chr7 (1-74)||(1048797-1048870)
chr7 (1-74)||(44725282-44725355)
chr7 (1-74)||(7093969-7094042)
chr7 (1-74)||(22135510-22135583)
chr7 (1-74)||(40550537-40550610)
chr7 (1-64)||(4295449-4295512)
chr7 (1-55)||(21678785-21678839)
chr7 (1-74)||(24749294-24749367)
chr7 (1-68)||(13290007-13290074)
chr7 (4-62)||(6594001-6594059)
chr7 (4-62)||(18391639-18391697)
chr7 (36-74)||(31159232-31159270)
chr7 (1-46)||(20298050-20298095)
chr7 (1-65)||(47675602-47675666)
[»] chr5 (18 HSPs)
chr5 (1-74)||(658716-658789)
chr5 (1-74)||(27911130-27911203)
chr5 (1-66)||(25806167-25806232)
chr5 (1-74)||(10750396-10750469)
chr5 (1-74)||(15356357-15356430)
chr5 (1-74)||(23665744-23665817)
chr5 (1-74)||(31543431-31543504)
chr5 (1-74)||(34478927-34479000)
chr5 (1-47)||(20043709-20043755)
chr5 (1-74)||(6745766-6745839)
chr5 (1-74)||(18467382-18467455)
chr5 (1-62)||(29721017-29721078)
chr5 (1-62)||(9788686-9788747)
chr5 (1-38)||(18510922-18510959)
chr5 (1-62)||(26171409-26171470)
chr5 (4-62)||(40380758-40380816)
chr5 (1-62)||(16407977-16408038)
chr5 (10-62)||(16545079-16545131)
[»] chr6 (16 HSPs)
chr6 (1-69)||(15534110-15534178)
chr6 (1-67)||(26944229-26944295)
chr6 (1-69)||(17012766-17012834)
chr6 (1-69)||(26067903-26067971)
chr6 (1-74)||(26932071-26932144)
chr6 (1-74)||(33309587-33309660)
chr6 (1-74)||(3395094-3395167)
chr6 (1-69)||(3631451-3631519)
chr6 (1-68)||(12936757-12936824)
chr6 (1-67)||(30443998-30444064)
chr6 (1-54)||(5408534-5408587)
chr6 (1-54)||(5412859-5412912)
chr6 (1-62)||(12157961-12158022)
chr6 (4-62)||(16553318-16553376)
chr6 (4-62)||(16629874-16629932)
chr6 (4-62)||(16651578-16651636)
[»] chr3 (25 HSPs)
chr3 (1-64)||(53917182-53917245)
chr3 (1-69)||(28101516-28101584)
chr3 (1-74)||(456584-456657)
chr3 (1-74)||(3315359-3315432)
chr3 (1-74)||(6065301-6065374)
chr3 (1-74)||(43226754-43226827)
chr3 (1-74)||(5192327-5192400)
chr3 (1-74)||(10957831-10957904)
chr3 (1-74)||(18098679-18098752)
chr3 (1-74)||(43422976-43423049)
chr3 (1-69)||(11168783-11168851)
chr3 (1-69)||(5898091-5898159)
chr3 (1-69)||(42990981-42991049)
chr3 (1-74)||(4310018-4310091)
chr3 (1-62)||(53597915-53597976)
chr3 (1-68)||(7769238-7769305)
chr3 (1-50)||(1619982-1620031)
chr3 (1-62)||(5259787-5259848)
chr3 (1-62)||(23199603-23199664)
chr3 (1-46)||(23634150-23634195)
chr3 (1-62)||(37407331-37407392)
chr3 (4-62)||(4600187-4600245)
chr3 (4-62)||(6717155-6717213)
chr3 (4-62)||(10209843-10209901)
chr3 (1-62)||(22834473-22834534)
[»] chr1 (17 HSPs)
chr1 (1-66)||(31736984-31737049)
chr1 (1-74)||(6996282-6996355)
chr1 (1-74)||(25250789-25250862)
chr1 (1-74)||(28841120-28841193)
chr1 (1-74)||(51750735-51750808)
chr1 (1-74)||(16226866-16226939)
chr1 (1-74)||(28203207-28203280)
chr1 (2-74)||(50078303-50078375)
chr1 (4-74)||(47178060-47178130)
chr1 (1-74)||(27338641-27338714)
chr1 (1-74)||(28997763-28997836)
chr1 (1-74)||(29003479-29003552)
chr1 (1-74)||(20300829-20300902)
chr1 (1-74)||(51758232-51758305)
chr1 (1-69)||(8348573-8348641)
chr1 (1-67)||(16429653-16429719)
chr1 (1-62)||(31657846-31657907)
[»] chr8 (10 HSPs)
chr8 (1-64)||(41383416-41383479)
chr8 (1-74)||(27827738-27827811)
chr8 (1-74)||(43080355-43080428)
chr8 (1-74)||(18811461-18811534)
chr8 (1-74)||(21481249-21481322)
chr8 (1-69)||(15069325-15069393)
chr8 (1-68)||(31577801-31577868)
chr8 (1-62)||(5591527-5591588)
chr8 (8-53)||(17848300-17848345)
chr8 (1-62)||(34255971-34256032)
[»] chr4 (21 HSPs)
chr4 (1-64)||(22802245-22802308)
chr4 (1-74)||(14788941-14789014)
chr4 (1-74)||(16933656-16933729)
chr4 (1-74)||(22782245-22782318)
chr4 (1-74)||(36379036-36379109)
chr4 (1-68)||(18537012-18537079)
chr4 (1-74)||(22134125-22134198)
chr4 (1-66)||(36921006-36921071)
chr4 (1-74)||(11008076-11008149)
chr4 (4-74)||(47563507-47563577)
chr4 (1-74)||(16454055-16454128)
chr4 (1-74)||(22046223-22046296)
chr4 (1-65)||(12402604-12402668)
chr4 (1-62)||(3578202-3578263)
chr4 (1-74)||(9175980-9176053)
chr4 (1-62)||(52094827-52094888)
chr4 (4-62)||(5136734-5136792)
chr4 (4-62)||(8394060-8394118)
chr4 (1-74)||(12395368-12395440)
chr4 (1-74)||(12400330-12400402)
chr4 (1-62)||(12743393-12743454)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-74)||(50716-50789)
[»] chr2 (7 HSPs)
chr2 (1-62)||(6263662-6263723)
chr2 (1-74)||(19503844-19503917)
chr2 (1-74)||(21520202-21520275)
chr2 (1-74)||(35217478-35217551)
chr2 (1-74)||(36560649-36560722)
chr2 (1-68)||(34574666-34574733)
chr2 (1-74)||(22405438-22405511)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-69)||(26398-26466)
[»] scaffold1674 (1 HSPs)
scaffold1674 (1-66)||(960-1025)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-74)||(22824-22897)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-74)||(34248-34321)
[»] scaffold1899 (1 HSPs)
scaffold1899 (1-74)||(322-395)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-74)||(73025-73098)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-62)||(115245-115306)


Alignment Details
Target: scaffold0004 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 80637 - 80564
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  80637 aaagactttgtcatatacaaatattcgaactttgaccacatcgatggcgcggttgtttcctttgctacttctct 80564  T

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Target: chr7 (Bit Score: 62; Significance: 5e-27; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28486345 - 28486280
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgct 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28486345 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttccgttgct 28486280  T

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Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7471489 - 7471562
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  7471489 aaagactttgtcatatacaaagattccaactttgaccacatcgatgccgcggttgtatcctttgttacttctct 7471562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38394766 - 38394693
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  38394766 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 38394693  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7351159 - 7351227
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  7351159 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctact 7351227  T

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Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36230 - 36157
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||||||||| ||||    
T  36230 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggtagcttcctttgctacttctct 36157  T

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Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1048797 - 1048870
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  1048797 aaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctct 1048870  T

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Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44725355 - 44725282
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  44725355 aaagactttgtcatatacaaagattccaactttgcccaaatcgatgccgcggttggttcctttgctacttctct 44725282  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7093969 - 7094042
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| | || ||||||| ||||||||||| |||||||| ||||||||||||| ||||    
T  7093969 aaagactttgtcatatacaaagactccaactttgcccacatcgatgtcgcggttgcttcctttgctacttctct 7094042  T

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Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22135583 - 22135510
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||| ||||||||||||| ||||    
T  22135583 aaagactttgtcatatacaaagattccaactttgcccatattgatgccgcggttgcttcctttgctacttctct 22135510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40550610 - 40550537
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||| ||||||||||||| ||||    
T  40550610 aaagactttgtcatatacaaagattccaactttgcccatattgatgccgcggttgcttcctttgctacttctct 40550537  T

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Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4295449 - 4295512
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttg 64  Q
    ||||||||||||||||||||| |||| ||||||  ||||||||||||||||||| | |||||||    
T  4295449 aaagactttgtcatatacaaagattccaacttttcccacatcgatgccgcggttttatcctttg 4295512  T

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Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21678839 - 21678785
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttg 55  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||| ||||||||    
T  21678839 aaagactttgtaaaatacaaagattcgaactttgaccacatcgatgtcgcggttg 21678785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24749367 - 24749294
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||||||  ||||| ||| ||||||||| ||||    
T  24749367 aaagactttgtcatatacaaagatttcaactttgcccacatcgatgccatggttggttcttttgctacttctct 24749294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13290007 - 13290074
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctac 68  Q
    ||||||||||||||||||||  | || ||||||||||||||| ||| | |||||| ||||||||||||    
T  13290007 aaagactttgtcatatacaatgactccaactttgaccacatcaatgtcccggttggttcctttgctac 13290074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 6594001 - 6594059
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  6594001 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 6594059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18391639 - 18391697
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  18391639 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 18391697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 31159232 - 31159270
Alignment:
Q  36 ccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  31159232 ccacatcgatgccgcggttgcttcctttgctacttctct 31159270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20298095 - 20298050
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatg 46  Q
    ||||||||||||||||||||| ||||  |||||| |||||||||||    
T  20298095 aaagactttgtcatatacaaagattccgactttgcccacatcgatg 20298050  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47675602 - 47675666
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgc 65  Q
    ||||| || |||||||||||  | || ||||||||||||||||| |||||||| | |||||||||    
T  47675602 aaagatttggtcatatacaatgactcaaactttgaccacatcgacgccgcggtaggttcctttgc 47675666  T

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Target: chr5 (Bit Score: 62; Significance: 5e-27; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 658789 - 658716
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  658789 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgtcgcggttggttcctttgctacttctct 658716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27911203 - 27911130
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  27911203 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcagttgattcctttgctacttctct 27911130  T

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Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25806232 - 25806167
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgct 66  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  25806232 aaagactttgtaatatacaaatattcgaactttgaccacatcgatgctgcggttgtttccattgct 25806167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10750469 - 10750396
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||| ||||| ||||    
T  10750469 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttcctacttctct 10750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15356357 - 15356430
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  15356357 aaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctct 15356430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23665817 - 23665744
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  23665817 aaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctct 23665744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31543504 - 31543431
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| ||||||||||||| ||||    
T  31543504 aaagactttgtcatatacaaagattctaactttgcccacatcgatgtcgcggttgcttcctttgctacttctct 31543431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34478927 - 34479000
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| ||||||||||||| ||||    
T  34478927 aaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgcttcctttgctacttctct 34479000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20043755 - 20043709
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgc 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20043755 aaagactttgtcatatacaaatattcgaactttgactacatcgatgc 20043709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6745839 - 6745766
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||  ||||||| |||||| ||||||||||||  ||||||||||||| ||||    
T  6745839 aaagactttgtcatatacaaagattacaactttgcccacattgatgccgcggttcgttcctttgctacttctct 6745766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18467455 - 18467382
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||| |||||||  ||||||||||||| ||||    
T  18467455 aaagactttgtcatatacaaagattccaactttgcccatatcgatgtcgcggttcgttcctttgctacttctct 18467382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29721078 - 29721017
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  29721078 aaagacttggtcatatacaacgattccaactttgaccacatcgatgccgcggttggttcctt 29721017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9788686 - 9788747
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  |||| ||||||||||| |||||||||||||||| ||||||    
T  9788686 aaagacttggtcatatacaacgattccaactttgaccatatcgatgccgcggttggttcctt 9788747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18510922 - 18510959
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgacca 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18510922 aaagactttgtcatatacaaatattcgaactttgacca 18510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26171470 - 26171409
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  |||| ||||||||||| ||||||||| |||||| ||||||    
T  26171470 aaagacttggtcatatacaacgattccaactttgaccatatcgatgccacggttggttcctt 26171409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 40380816 - 40380758
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  40380816 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 40380758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16408038 - 16407977
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  |||| |||||||| || |||||| ||||||||| ||||||    
T  16408038 aaagacttggtcatatacaacgattccaactttgatcatatcgattccgcggttggttcctt 16407977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 16545131 - 16545079
Alignment:
Q  10 gtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  16545131 gtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 16545079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15534110 - 15534178
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15534110 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgtcgcggttggttcctttgctact 15534178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26944295 - 26944229
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgcta 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  26944295 aaagactttgtcatatacaaatattcgaactttgaccacatcgatggcgcggttggttccttcgcta 26944229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17012834 - 17012766
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  17012834 aaagactttatcatatacaaatattcgaactttgaccacatcgatgtcgcagttggttcctttgctact 17012766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26067903 - 26067971
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  26067903 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctact 26067971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26932071 - 26932144
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||  ||||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  26932071 aaagactttgtcatatacaaagatttcaactttgcccacaacgatgccgcggttgcttcctttgctacttctct 26932144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33309660 - 33309587
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||| ||||||| ||||||||||||| ||||    
T  33309660 aaagactttgtcatatacaaagattccaactttgcccatatcgatgctgcggttgcttcctttgctacttctct 33309587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3395167 - 3395094
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||||| ||||||| ||||||||| ||| ||||    
T  3395167 aaagactttgtcatatacaaagattccaactttgcacacatcgatgcggcggttggttcctttgccacttctct 3395094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3631451 - 3631519
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    |||||||||||||||||||||  ||| ||||||| |||||||||||| ||||| | |||||| ||||||    
T  3631451 aaagactttgtcatatacaaagcttccaactttggccacatcgatgctgcggtggattccttcgctact 3631519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12936757 - 12936824
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctac 68  Q
    ||||| ||||||||||||||| | || ||||||||||||||||||| |||||||| ||| || |||||    
T  12936757 aaagattttgtcatatacaaagactccaactttgaccacatcgatggcgcggttggttctttcgctac 12936824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30444064 - 30443998
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgcta 67  Q
    |||||||| |||||||||||  | || |||||||||||||||||||||| ||||| |||||| ||||    
T  30444064 aaagacttggtcatatacaacgactccaactttgaccacatcgatgccgtggttggttccttcgcta 30443998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5408534 - 5408587
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggtt 54  Q
    ||||||||||||||||||||  | || ||||||||||||||||||| |||||||    
T  5408534 aaagactttgtcatatacaacgactccaactttgaccacatcgatgtcgcggtt 5408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5412859 - 5412912
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggtt 54  Q
    ||||||||||||||||||||  | || ||||||||||||||||||| |||||||    
T  5412859 aaagactttgtcatatacaacgactccaactttgaccacatcgatgtcgcggtt 5412912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12158022 - 12157961
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||||||||||||||||||  | || ||||||||||||||||||| |||| ||| ||||||    
T  12158022 aaagactttgtcatatacaatgactccaactttgaccacatcgatgtcgcgtttggttcctt 12157961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16553376 - 16553318
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  16553376 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 16553318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16629932 - 16629874
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  16629932 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 16629874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16651636 - 16651578
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  16651636 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 16651578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 8e-26; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53917182 - 53917245
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  53917182 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcagttgtttcctttg 53917245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28101516 - 28101584
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||    
T  28101516 aaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttggttcttttgctact 28101584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 456657 - 456584
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| ||||||||||||| ||||    
T  456657 aaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgcttcctttgctacttctct 456584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3315432 - 3315359
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||| |||||||  |||||||||| |||||||| ||||||||||||| ||||    
T  3315432 aaagactttgtcatatacaaatattccaactttgcacacatcgatgtcgcggttggttcctttgctacttctct 3315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6065301 - 6065374
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||| |||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  6065301 aaagactttgtcgtatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 6065374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43226827 - 43226754
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  ||||||||||||| ||||    
T  43226827 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttcgttcctttgctacttctct 43226754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5192400 - 5192327
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| ||| |||| ||||||||||||| ||||    
T  5192400 aaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcagttgcttcctttgctacttctct 5192327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10957831 - 10957904
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||||| |||||| ||||||||||||| ||||    
T  10957831 aaagactttgtcatatacaaagattccaactttgcccaaatcgatgccacggttggttcctttgctacttctct 10957904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18098679 - 18098752
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||||| ||||    
T  18098679 aaagactttgtcatatacaaagattccatctttgcccacattgatgccgcggttggttcctttgctacttctct 18098752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43422976 - 43423049
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||  ||||||||||| ||||    
T  43422976 aaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgtaacctttgctacttctct 43423049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11168851 - 11168783
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||| ||||| |||||||    
T  11168851 aaagactttgtcatatacaaagattccaactttgcccacatcgatgctgcggttgcttcctctgctact 11168783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5898159 - 5898091
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||| |||||||  |||||||||||||    
T  5898159 aaagactttgtcatatacaaagattccaactttgcccatatcgatgtcgcggttcgttcctttgctact 5898091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42991049 - 42990981
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||| ||| |||| ||||||| ||||||||||| |||||||  |||||||||||||    
T  42991049 aaagactttgtcatatataaagattccaactttgcccacatcgatgtcgcggttcgttcctttgctact 42990981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4310018 - 4310091
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||  ||||||| ||| || ||||||||||||  ||||||||||||| ||||    
T  4310018 aaagactttgtcatatacaaagatttcaactttgcccatattgatgccgcggttcgttcctttgctacttctct 4310091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53597976 - 53597915
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||||||||||||||||||| | |  || ||||||||||||||||||||||||| ||||||    
T  53597976 aaagactttgtcatatacaaagacttcaattttgaccacatcgatgccgcggttgattcctt 53597915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7769305 - 7769238
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctac 68  Q
    ||||||||||||||||||||| | || ||||||||||||||||||| |||  ||| ||||||| ||||    
T  7769305 aaagactttgtcatatacaaagactccaactttgaccacatcgatgtcgcaattggttccttttctac 7769238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1619982 - 1620031
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgc 50  Q
    |||||||||||||||| |||| | || |||||||||||||||||||||||    
T  1619982 aaagactttgtcatatgcaaagactccaactttgaccacatcgatgccgc 1620031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5259787 - 5259848
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  | || |||||||||||||| ||||||||||||| ||||||    
T  5259787 aaagacttggtcatatacaacgactccaactttgaccacatagatgccgcggttggttcctt 5259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23199603 - 23199664
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  |||| ||||||||||| ||||||| |||||||| ||||||    
T  23199603 aaagacttggtcatatacaacgattccaactttgaccatatcgatgtcgcggttggttcctt 23199664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23634195 - 23634150
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatg 46  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  23634195 aaagactttgtcatatacaaagattccaactttgacctcatcgatg 23634150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37407392 - 37407331
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  | || |||||||||||||| ||||||||||||| ||||||    
T  37407392 aaagacttggtcatatacaacgactccaactttgaccacattgatgccgcggttggttcctt 37407331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 4600187 - 4600245
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  4600187 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 4600245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 6717213 - 6717155
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  6717213 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 6717155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 10209901 - 10209843
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  10209901 gacttggtcatatacaatgattccaacttagaccatatcgatgccgcggttggttcctt 10209843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22834473 - 22834534
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||||||  ||||||||||  | || ||||||||||||||||| |||||||||| ||||||    
T  22834473 aaagacttgatcatatacaatgactccaactttgaccacatcgacgccgcggttggttcctt 22834534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31736984 - 31737049
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgct 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  31736984 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttcgttcctttgct 31737049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6996355 - 6996282
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||| ||||    
T  6996355 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgtcgcggttggatcctttgttacttctct 6996282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25250789 - 25250862
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  25250789 aaagactttgccatatacaaatatttgaactttaaccacatcgataccgcggttgtttcctttgctacttctct 25250862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28841193 - 28841120
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  28841193 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 28841120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51750808 - 51750735
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  51750808 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 51750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16226939 - 16226866
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||| ||||    
T  16226939 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgttacttctct 16226866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28203207 - 28203280
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||| |||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  28203207 aaagactttgtcttatacaaagattccaactttgcccacatcgatgccgcggttggttcctttgctacttctct 28203280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 50078303 - 50078375
Alignment:
Q  2 aagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||| ||||    
T  50078303 aagattttgtcatatacaaatattcaaactttgaccacattgatgccgcagttgtttccttcgctacttctct 50078375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 47178130 - 47178060
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||| ||| ||||||||||||| ||||    
T  47178130 gactttgtcatatacaaagattccaactttgcccacatcgatgccgcgattgcttcctttgctacttctct 47178060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27338641 - 27338714
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||  ||||||||||||| ||||    
T  27338641 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcgattcattcctttgctacttctct 27338714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28997763 - 28997836
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| || |||||| |||||||||||| ||||    
T  28997763 aaagattttgtcatatacaaatatttgaactttgaccacattgatgtcgtggttgtatcctttgctacttctct 28997836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29003479 - 29003552
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| || |||||| |||||||||||| ||||    
T  29003479 aaagattttgtcatatacaaatatttgaactttgaccacattgatgtcgtggttgtatcctttgctacttctct 29003552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20300902 - 20300829
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||||| |||||  ||||||||||||| ||||    
T  20300902 aaagactttgtcatatacaaagattccaactttgcccatatcgatgccacggtttgttcctttgctacttctct 20300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51758305 - 51758232
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||| |||||||| |||| || |||| ||||||||||| |||||||| ||||||||||||| ||||    
T  51758305 aaagactttgtcgtatacaaagattccaattttgcccacatcgatgtcgcggttgcttcctttgctacttctct 51758232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8348573 - 8348641
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||| | || ||||||||||||||||| ||| |||||| || ||| ||||||    
T  8348573 aaagactttgtcatatacaaagactctaactttgaccacatcgacgccacggttggtttcttcgctact 8348641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16429719 - 16429653
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgcta 67  Q
    ||||||||||||||||||||| | | ||||||| |||||||||| |||||||| | |||||| ||||    
T  16429719 aaagactttgtcatatacaaacacttgaactttaaccacatcgacgccgcggtagattccttcgcta 16429653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31657907 - 31657846
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| || |||||||||||  | || ||||||||||||||||| |||||||||| ||||||    
T  31657907 aaagatttggtcatatacaatgactccaactttgaccacatcgacgccgcggttggttcctt 31657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41383479 - 41383416
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttg 64  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  41383479 aaagactttgtcatatacaaatatttgaactttgaccacatcgatgtcgcggttgtttcctttg 41383416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27827811 - 27827738
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  27827811 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 27827738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43080428 - 43080355
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  43080428 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 43080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18811534 - 18811461
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| | ||||| |||||||||||||||||||| ||||||||||||| ||||    
T  18811534 aaagactttgtcatatacaaagattccatctttgcccacatcgatgccgcggttgcttcctttgctacttctct 18811461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21481322 - 21481249
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| || |||||| ||||    
T  21481322 aaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttggttcattcgctacttctct 21481249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15069393 - 15069325
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||| ||| |||||||||    
T  15069393 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcagttggttcatttgctact 15069325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31577801 - 31577868
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctac 68  Q
    ||||||||||||||||||| | | || ||||||||||||||||||| |||  ||| |||||| |||||    
T  31577801 aaagactttgtcatatacacagactccaactttgaccacatcgatgacgcaattggttccttcgctac 31577868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5591588 - 5591527
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||||||  ||||||||||  | || ||||||||||||||||| |||||||||| ||||||    
T  5591588 aaagacttgatcatatacaatgactccaactttgaccacatcgacgccgcggttggttcctt 5591527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 17848345 - 17848300
Alignment:
Q  8 ttgtcatatacaaatattcgaactttgaccacatcgatgccgcggt 53  Q
    |||||||||||||| | || |||||||||||||||||| |||||||    
T  17848345 ttgtcatatacaaagactccaactttgaccacatcgattccgcggt 17848300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34255971 - 34256032
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  | || |||||||||||||||||||  ||||||| ||||||    
T  34255971 aaagacttggtcatatacaacgactccaactttgaccacatcgatgttgcggttggttcctt 34256032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22802245 - 22802308
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttg 64  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  22802245 aaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttgtttcctttg 22802308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14788941 - 14789014
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||| ||||    
T  14788941 aaagactttgtcatatacaaatattcgatctttgaccacatcgatgccgcggtagtatcttttgctacttctct 14789014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16933656 - 16933729
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  16933656 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 16933729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22782245 - 22782318
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  22782245 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 22782318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36379109 - 36379036
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| |||||| ||||    
T  36379109 aaagactttgtcatatacaaatattcgaactttgactacatcgatgccacggttggttccttcgctacttctct 36379036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 18537012 - 18537079
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctac 68  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| |||||    
T  18537012 aaagactttgtcatatacaaatatacgaactttgaccacatcgatgccgcgattggttccttcgctac 18537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22134125 - 22134198
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  22134125 aaagactttgtcatataaaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 22134198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36921006 - 36921071
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgct 66  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||  |||||||||    
T  36921006 aaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcgattggatcctttgct 36921071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11008076 - 11008149
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| | ||||  |||||||||||||||||||| ||||||||||||| ||||    
T  11008076 aaagactttgtcatatacaaagattccatcttttcccacatcgatgccgcggttgcttcctttgctacttctct 11008149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 47563577 - 47563507
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||| |||| ||||||  ||||||||||| ||||||||| |||||||||||| ||||    
T  47563577 gactttgtcatatacaaagattccaacttttcccacatcgatgtcgcggttgtatcctttgctacttctct 47563507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16454128 - 16454055
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||| ||||||| ||||||||||||| || |||||||||||||||| ||||||||| | |||||||||| ||||    
T  16454128 aaagtctttgtcgtatacaaatattcaaaatttgaccacatcgatgtcgcggttgtatactttgctacttctct 16454055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22046223 - 22046296
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| || |||| |||||||||||||| ||||| || |||||||||| ||||    
T  22046223 aaagactttgtcatatacaaagattccaaatttgcccacatcgatgccgaggttgcttactttgctacttctct 22046296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12402604 - 12402668
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgc 65  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| | |||||| |||||||||    
T  12402604 aaagactttgtcatatacaaagattccaactttgcccacatcgatgtcacggttggttcctttgc 12402668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3578202 - 3578263
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||||||||||||||| ||| | || ||||||||||||||||||| |||||||| ||||||    
T  3578202 aaagactttgtcatatataaagactccaactttgaccacatcgatgtcgcggttggttcctt 3578263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9175980 - 9176053
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| ||||  |||||  ||||||||||| || ||||| ||||||||||||| ||||    
T  9175980 aaagactttgtcatatacaaagattcccacttttcccacatcgatgtcgtggttgcttcctttgctacttctct 9176053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52094827 - 52094888
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  | || |||||||||||||||||||||||||| | ||||||    
T  52094827 aaagacttggtcatatacaatgactccaactttgaccacatcgatgccgcggtaggttcctt 52094888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 5136792 - 5136734
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  5136792 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 5136734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 8394118 - 8394060
Alignment:
Q  4 gactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| ||||||    
T  8394118 gacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttcctt 8394060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12395368 - 12395440
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||| ||| ||||||| |||| ||||||| ||||||||||| | ||||||  |||||||||||| ||||    
T  12395368 aaagactttttca-atacaaagattccaactttgcccacatcgatgtcacggttggctcctttgctacttctct 12395440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12400330 - 12400402
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||| ||| ||||||| |||| ||||||| ||||||||||| | ||||||  |||||||||||| ||||    
T  12400330 aaagactttttca-atacaaagattccaactttgcccacatcgatgtcacggttggctcctttgctacttctct 12400402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12743393 - 12743454
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  |||  ||||||||||||||||| |||||||| | ||||||    
T  12743393 aaagacttggtcatatacaatgatttcaactttgaccacatcgacgccgcggtaggttcctt 12743454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50789 - 50716
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||| ||||    
T  50789 aaagactttgtcatatacaaatattcgatctttgaccacatcgatgccgcggtagtatcttttgctacttctct 50716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6263662 - 6263723
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  6263662 aaagactttgtcatatacaaatatctgaactttgaccacatcgatgccgcggttgtttcctt 6263723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19503844 - 19503917
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  19503844 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 19503917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21520202 - 21520275
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||| ||||||||||||| ||||    
T  21520202 aaagactttgtcatatacaaagattccaactttggccacatcgatgctgcggttggttcctttgctacttctct 21520275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35217478 - 35217551
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  35217478 aaagactttgtcatatataaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 35217551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36560649 - 36560722
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  36560649 aaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctct 36560722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34574666 - 34574733
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctac 68  Q
    |||| |||||||||||||||| | || |||||||||||||||||||||||||||| ||||||||||||    
T  34574666 aaaggctttgtcatatacaaagactccaactttgaccacatcgatgccgcggttggttcctttgctac 34574733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22405438 - 22405511
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| |||||| |||||| ||||    
T  22405438 aaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttggttccttcgctacttctct 22405511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26398 - 26466
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctact 69  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  26398 aaagactttatcatatacaaatattcgaactttgaccacatcgatgtcgcagttggttcctttgctact 26466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 960 - 1025
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgct 66  Q
    ||||||||||||||||||||| |||| || |||||||||||||||| |||||||||||||||||||    
T  960 aaagactttgtcatatacaaaaattcaaaatttgaccacatcgatgacgcggttgtttcctttgct 1025  T

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Target: scaffold0140 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22897 - 22824
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  22897 aaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctct 22824  T

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Target: scaffold0011 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34321 - 34248
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||  |||||||||||||||||| ||||    
T  34321 aaagactttgtcatatacaaagattccaactttgcccacatcgatgccgttgttgtttcctttgctacttctct 34248  T

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Target: scaffold1899 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 395 - 322
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    |||| |||||||||||||||| |||| ||||||| ||||||||||||| |||||| ||||||||||||| ||||    
T  395 aaaggctttgtcatatacaaagattccaactttgcccacatcgatgccacggttgcttcctttgctacttctct 322  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 73025 - 73098
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctttgctactcctct 74  Q
    ||||| ||||||||||||||| |||| ||||||| |||||| |||||||| |||  ||||||||||||| ||||    
T  73025 aaagattttgtcatatacaaagattccaactttgcccacatagatgccgcagttcgttcctttgctacttctct 73098  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 115306 - 115245
Alignment:
Q  1 aaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttcctt 62  Q
    |||||||| |||||||||||  | |  |||||||||||| ||||||||||||||| ||||||    
T  115306 aaagacttggtcatatacaatgactacaactttgaccacgtcgatgccgcggttggttcctt 115245  T

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